2K7XA

Solution structure of c-terminal domain of sars-cov main protease
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
120
structure length
120
Chain Sequence
DRQTAQAAGTDTTITLNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords SARS-CoV main protease
publication title C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer.
pubmed doi rcsb
source organism Sars coronavirus
total genus 37
structure length 120
sequence length 120
ec nomenclature
pdb deposition date 2008-08-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1840.10 Mainly Alpha Orthogonal Bundle main proteinase (3clpro) structure, domain 3 main proteinase (3clpro) structure, domain 3 2k7xA00
2A5KA 1UK3A 4ZROA 3V3MA 3VB6A 1Z1IA 2BX3A 2ZU5A 2OP9A 2H2ZA 2V6NA 4YOJA 2Z3CA 1LVOA 3VB3A 4YOIA 2K7XA 3E91A 4YO9A 3SNBA 4HI3A 3SNCA 1UJ1A 5B6OA 2GTBA 4WMEA 2GT8A 2YNBA 2GT7A 2Z3DA 2D2DA 3F9FA 3SNDA 3M3TA 2AMDA 4WMDA 3M3VA 2AMQA 2Z9LA 3VB4A 3VB7A 2HOBA 2ZU2A 3SNEA 4RSPA 3AW0A 3EBNA 4MDSA 4TWYA 3FZDA 2Q6GA 2GZ8A 3SNAA 4XFQA 2QCYA 4WMFA 3EAJA 3TIUA 3M3SA 2Z94A 1UK2A 5HYOA 4F49A 1WOFA 2ALVA 2Z3EA 2GZ7A 4WY3A 3F9GA 3AVZA 3SN8A 2VJ1A 2QIQA 3TNSA 2Q6DA 3TLOA 2C3SA 3IWMA 3EA8A 3ATWA 2A5AA 2YNAA 2AMPA 3AW1A 5C5NA 5GWZA 1Z1JA 3VB5A 2DUCA 2Q6FA 1P9UA 5C3NA 2PWXA 3EA7A 2QC2A 2Z9KA 5EU8A 1P9SA 3F9HA 3TNTA 2ZU4A 3EA9A 4ZUHA 2BX4A 2LIZA 4YOGA 2A5IA 3D62A 3D23A 2GX4A 2GZ9A 4TWWA 4YLUA 1UK4A 3SZNA 3F9EA 2Z9GA 1Q2WA 5C5OA 2Z9JA 3TITA
chains in the Genus database with same CATH superfamily
2A5KA 1UK3A 4ZROA 3V3MA 3VB6A 1Z1IA 2BX3A 2ZU5A 2OP9A 2H2ZA 2V6NA 4YOJA 2Z3CA 1LVOA 3VB3A 4YOIA 2K7XA 3E91A 4YO9A 3SNBA 4HI3A 3SNCA 1UJ1A 5B6OA 2GTBA 4WMEA 2GT8A 2YNBA 2GT7A 2Z3DA 2D2DA 3F9FA 3SNDA 3M3TA 2AMDA 4WMDA 3M3VA 2AMQA 2Z9LA 3VB4A 3VB7A 2HOBA 2ZU2A 3SNEA 4RSPA 3AW0A 3EBNA 4MDSA 4TWYA 3FZDA 2Q6GA 2GZ8A 3SNAA 4XFQA 2QCYA 4WMFA 3EAJA 3TIUA 3M3SA 2Z94A 1UK2A 5HYOA 4F49A 1WOFA 2ALVA 2Z3EA 2GZ7A 4WY3A 3F9GA 3AVZA 3SN8A 2VJ1A 2QIQA 3TNSA 2Q6DA 3TLOA 2C3SA 3IWMA 3EA8A 3ATWA 2A5AA 2YNAA 2AMPA 3AW1A 5C5NA 5GWZA 1Z1JA 3VB5A 2DUCA 2Q6FA 1P9UA 5C3NA 2PWXA 3EA7A 2QC2A 2Z9KA 5EU8A 1P9SA 3F9HA 3TNTA 2ZU4A 3EA9A 4ZUHA 2BX4A 2LIZA 4YOGA 2A5IA 3D62A 3D23A 2GX4A 2GZ9A 4TWWA 4YLUA 1UK4A 3SZNA 3F9EA 2Z9GA 1Q2WA 5C5OA 2Z9JA 3TITA
chains in the Genus database with same CATH topology
2A5KA 1UK3A 4ZROA 3V3MA 3VB6A 1Z1IA 2BX3A 2ZU5A 2OP9A 2H2ZA 2V6NA 4YOJA 2Z3CA 1LVOA 3VB3A 4YOIA 2K7XA 3E91A 4YO9A 3SNBA 4HI3A 3SNCA 1UJ1A 5B6OA 2GTBA 4WMEA 2GT8A 2YNBA 2GT7A 2Z3DA 2D2DA 3F9FA 3SNDA 3M3TA 2AMDA 4WMDA 3M3VA 2AMQA 2Z9LA 3VB4A 3VB7A 2HOBA 2ZU2A 3SNEA 4RSPA 3AW0A 3EBNA 4MDSA 4TWYA 3FZDA 2Q6GA 2GZ8A 3SNAA 4XFQA 2QCYA 4WMFA 3EAJA 3TIUA 3M3SA 2Z94A 1UK2A 5HYOA 4F49A 1WOFA 2ALVA 2Z3EA 2GZ7A 4WY3A 3F9GA 3AVZA 3SN8A 2VJ1A 2QIQA 3TNSA 2Q6DA 3TLOA 2C3SA 3IWMA 3EA8A 3ATWA 2A5AA 2YNAA 2AMPA 3AW1A 5C5NA 5GWZA 1Z1JA 3VB5A 2DUCA 2Q6FA 1P9UA 5C3NA 2PWXA 3EA7A 2QC2A 2Z9KA 5EU8A 1P9SA 3F9HA 3TNTA 2ZU4A 3EA9A 4ZUHA 2BX4A 2LIZA 4YOGA 2A5IA 3D62A 3D23A 2GX4A 2GZ9A 4TWWA 4YLUA 1UK4A 3SZNA 3F9EA 2Z9GA 1Q2WA 5C5OA 2Z9JA 3TITA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2A5K A;  1UK3 A;  4ZRO A;  3V3M A;  3VB6 A;  1Z1I A;  2BX3 A;  2ZU5 A;  2OP9 A;  2H2Z A;  2V6N A;  4YOJ A;  2Z3C A;  1LVO A;  3VB3 A;  4YOI A;  2K7X A;  3E91 A;  4YO9 A;  3SNB A;  4HI3 A;  3SNC A;  1UJ1 A;  5B6O A;  2GTB A;  4WME A;  2GT8 A;  2YNB A;  2GT7 A;  2Z3D A;  2D2D A;  3F9F A;  3SND A;  3M3T A;  2AMD A;  4WMD A;  3M3V A;  2AMQ A;  2Z9L A;  3VB4 A;  3VB7 A;  2HOB A;  2ZU2 A;  3SNE A;  4RSP A;  3AW0 A;  3EBN A;  4MDS A;  4TWY A;  3FZD A;  2Q6G A;  2GZ8 A;  3SNA A;  4XFQ A;  2QCY A;  4WMF A;  3EAJ A;  3TIU A;  3M3S A;  2Z94 A;  1UK2 A;  5HYO A;  4F49 A;  1WOF A;  2ALV A;  2Z3E A;  2GZ7 A;  4WY3 A;  3F9G A;  3AVZ A;  3SN8 A;  2VJ1 A;  2QIQ A;  3TNS A;  2Q6D A;  3TLO A;  2C3S A;  3IWM A;  3EA8 A;  3ATW A;  2A5A A;  2YNA A;  2AMP A;  3AW1 A;  5C5N A;  5GWZ A;  1Z1J A;  3VB5 A;  2DUC A;  2Q6F A;  1P9U A;  5C3N A;  2PWX A;  3EA7 A;  2QC2 A;  2Z9K A;  5EU8 A;  1P9S A;  3F9H A;  3TNT A;  2ZU4 A;  3EA9 A;  4ZUH A;  2BX4 A;  2LIZ A;  4YOG A;  2A5I A;  3D62 A;  3D23 A;  2GX4 A;  2GZ9 A;  4TWW A;  4YLU A;  1UK4 A;  3SZN A;  3F9E A;  2Z9G A;  1Q2W A;  5C5O A;  2Z9J A;  3TIT A; 
#chains in the Genus database with same CATH topology
 2A5K A;  1UK3 A;  4ZRO A;  3V3M A;  3VB6 A;  1Z1I A;  2BX3 A;  2ZU5 A;  2OP9 A;  2H2Z A;  2V6N A;  4YOJ A;  2Z3C A;  1LVO A;  3VB3 A;  4YOI A;  2K7X A;  3E91 A;  4YO9 A;  3SNB A;  4HI3 A;  3SNC A;  1UJ1 A;  5B6O A;  2GTB A;  4WME A;  2GT8 A;  2YNB A;  2GT7 A;  2Z3D A;  2D2D A;  3F9F A;  3SND A;  3M3T A;  2AMD A;  4WMD A;  3M3V A;  2AMQ A;  2Z9L A;  3VB4 A;  3VB7 A;  2HOB A;  2ZU2 A;  3SNE A;  4RSP A;  3AW0 A;  3EBN A;  4MDS A;  4TWY A;  3FZD A;  2Q6G A;  2GZ8 A;  3SNA A;  4XFQ A;  2QCY A;  4WMF A;  3EAJ A;  3TIU A;  3M3S A;  2Z94 A;  1UK2 A;  5HYO A;  4F49 A;  1WOF A;  2ALV A;  2Z3E A;  2GZ7 A;  4WY3 A;  3F9G A;  3AVZ A;  3SN8 A;  2VJ1 A;  2QIQ A;  3TNS A;  2Q6D A;  3TLO A;  2C3S A;  3IWM A;  3EA8 A;  3ATW A;  2A5A A;  2YNA A;  2AMP A;  3AW1 A;  5C5N A;  5GWZ A;  1Z1J A;  3VB5 A;  2DUC A;  2Q6F A;  1P9U A;  5C3N A;  2PWX A;  3EA7 A;  2QC2 A;  2Z9K A;  5EU8 A;  1P9S A;  3F9H A;  3TNT A;  2ZU4 A;  3EA9 A;  4ZUH A;  2BX4 A;  2LIZ A;  4YOG A;  2A5I A;  3D62 A;  3D23 A;  2GX4 A;  2GZ9 A;  4TWW A;  4YLU A;  1UK4 A;  3SZN A;  3F9E A;  2Z9G A;  1Q2W A;  5C5O A;  2Z9J A;  3TIT A; 
#chains in the Genus database with same CATH homology
 2A5K A;  1UK3 A;  4ZRO A;  3V3M A;  3VB6 A;  1Z1I A;  2BX3 A;  2ZU5 A;  2OP9 A;  2H2Z A;  2V6N A;  4YOJ A;  2Z3C A;  1LVO A;  3VB3 A;  4YOI A;  2K7X A;  3E91 A;  4YO9 A;  3SNB A;  4HI3 A;  3SNC A;  1UJ1 A;  5B6O A;  2GTB A;  4WME A;  2GT8 A;  2YNB A;  2GT7 A;  2Z3D A;  2D2D A;  3F9F A;  3SND A;  3M3T A;  2AMD A;  4WMD A;  3M3V A;  2AMQ A;  2Z9L A;  3VB4 A;  3VB7 A;  2HOB A;  2ZU2 A;  3SNE A;  4RSP A;  3AW0 A;  3EBN A;  4MDS A;  4TWY A;  3FZD A;  2Q6G A;  2GZ8 A;  3SNA A;  4XFQ A;  2QCY A;  4WMF A;  3EAJ A;  3TIU A;  3M3S A;  2Z94 A;  1UK2 A;  5HYO A;  4F49 A;  1WOF A;  2ALV A;  2Z3E A;  2GZ7 A;  4WY3 A;  3F9G A;  3AVZ A;  3SN8 A;  2VJ1 A;  2QIQ A;  3TNS A;  2Q6D A;  3TLO A;  2C3S A;  3IWM A;  3EA8 A;  3ATW A;  2A5A A;  2YNA A;  2AMP A;  3AW1 A;  5C5N A;  5GWZ A;  1Z1J A;  3VB5 A;  2DUC A;  2Q6F A;  1P9U A;  5C3N A;  2PWX A;  3EA7 A;  2QC2 A;  2Z9K A;  5EU8 A;  1P9S A;  3F9H A;  3TNT A;  2ZU4 A;  3EA9 A;  4ZUH A;  2BX4 A;  2LIZ A;  4YOG A;  2A5I A;  3D62 A;  3D23 A;  2GX4 A;  2GZ9 A;  4TWW A;  4YLU A;  1UK4 A;  3SZN A;  3F9E A;  2Z9G A;  1Q2W A;  5C5O A;  2Z9J A;  3TIT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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