2KGAA

Nmr solution structures of hexanoyl acp (a non natural intermediate) from the actinorhodin polyketide synthase in streptomyces coelicolor
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
86
structure length
86
Chain Sequence
b'MATLLTTDDLRRALVESAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGALAEAA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Actinorhodin polyketide synthase acyl carrier protein
publication title Probing the Interactions of Early Polyketide Intermediates with the Actinorhodin ACP from S. coelicolor A3(2).
pubmed doi rcsb
source organism Streptomyces coelicolor
molecule tags Biosynthetic protein
total genus 24
structure length 86
sequence length 86
ec nomenclature
pdb deposition date 2009-03-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2kgaA00
2LIWA 2AFEA 2K2QA 2LKIA 5CZDB 2MR8A 2K93A 2CNRA 2N50A 4BPFA 3GZMA 2CQ8A 2KR5A 2N6YA 2N98A 2LL8A 4H2XC 2CGQA 4H2YC 4H2WC 2JU1A 2FADA 2K94A 2XZ0D 4R0MA 2PNGA 2AVAA 2MF4A 2EHTA 2GDWA 1L0IA 2MR7A 2GDXA 5HVCA 2KOOA 2L9FA 2MVUA 2KGCA 4CA3A 2AFDA 1ACPA 2LMLA 2MD9A 5HV8A 3EJEA 2M5RA 2KOQA 5KP7B 2QNWA 2FHSC 3GZLA 1OR5A 2KGDA 2N5HA 2DNWA 2LOLA 2FVFA 3EJDA 1VKUA 3CE7A 4HKGA 2L4BA 3NY7B 2FACA 4BPGA 2FQ2A 2VSQA 1AF8A 1HQBA 1X3OA 4BPHA 5KP8B 2JU2A 2FAEA 2ROQA 2K92A 2N5IA 4PWVB 2KOPA 2KWLA 2JQ4A 2KORA 3EJBA 4MRTC 2N6ZA 2KG6A 1T8KA 2X2BA 2GDYA 2L0QA 1DNYA 2CG5B 5EJDA 3RG2A 2KG8A 2FVEA 2MVVA 4NEOA 2JGPA 2LIUA 2FQ0A 2FVAA 1F80D 2KOSA 1HY8A 3LMOA 2KGAA 2EHSA 2KG9A 4DG9A 2KGEA 2AF8A 2LPKA 4IZ6A 2L22A 4PXHB 5KP6B 2XZ1C 1KLPA 2LTEA 2K0XA 1L0HA 2FQ1A 2K0YA 1NQ4A 2KW2A 2MY5A 1DV5A
chains in the Genus database with same CATH superfamily
5DCKA 2K93A 2CNRA 2N50A 4BPFA 4XFZA 1KC8Q 2GZIA 5HGOA 4XFYA 1VQ4P 2VLQA 2CGQA 2Z46A 3DTJA 2Z45A 4R0MA 1RO2A 2MR7A 3I56P 1YI2P 1VHNA 3EJEA 1UNKA 5KP7B 3GZLA 2DNWA 3EJDA 1VQ7P 3DS1A 2L4BA 4WYMA 2FACA 1CEIA 2FQ2A 2VSQA 1M1KQ 1GXHA 3CCMP 1A8OA 2PEOA 1RNIA 1BAJA 3Q20A 3H0DA 2GYKA 2PENA 1E6JP 5F2KA 3CXCO 3CC7P 3H4EA 2KOPA 3G0VA 3EJBA 1Z6MA 2L0QA 1DNYA 3RG2A 3CMEP 2KG8A 1FR2A 1YITP 2FVEA 1Q86Q 2LIUA 1F80D 1AYIA 2KOSA 1HY8A 3H47A 3LMOA 3CCLP 1EMVA 1EIAA 3DS3A 1JJ2O 4UHPB 3VRLC 2LPKA 4PXHB 2QEXP 4M0IA 3I55P 3B5IA 3G28A 5F2NA 2K0YA 2LF4A 3GKLC 1KQSO 1E0HA 2JYGA 4U0EA 2PEKA 2KR5A 2N6YA 2WPTA 2N98A 5F2OA 2LL8A 3CD6P 4H2WC 2P9XA 2FADA 2K94A 2XZ0D 2GZFA 1IMPA 2AVAA 3CCVP 1VQ9P 2JYLA 2GDWA 3M1MA 3DPHA 2KOOA 2L9FA 3CCEP 4CA3A 2M8NA 2LMLA 2XXMA 4GR2A 2QNWA 1M6EX 2KGDA 2JB0A 3CC4P 3MGEA 3CE7A 3U43A 1YHQP 2KODA 3DS5A 1QVFO 4XRQA 2ROQA 2M8PA 1S72P 4PWVB 5EW5E 2QA4P 2KG6A 2X2BA 2GDYA 1VQ8P 3G1GA 4NEOA 1VQKP 2FVAA 2KGAA 4GR6A 4PH1A 2GZJA 4IZ6A 2XT1A 1BXIA 2XV6A 5HGLA 3G6EP 3CMAP 4COCA 2K2QA 2MR8A 1K9MQ 2E1MA 4U0AA 2OTJP 3GZMA 1ZMBA 2PY8A 4IPYA 1IUQA 4H2YC 3CCJP 2JU1A 2VLOA 1VQ5P 2MF4A 2JBGA 2GZEA 2EHTA 5JPAA 1W2BO 2ERHA 2OARA 1QRJA 1ACPA 2AFDA 3G4SP 2BUOA 3OW2O 1VQLP 1AUMA 2M5RA 2KOQA 2K0DX 2FHSC 1OR5A 2N5HA 2LOLA 2FVFA 1YJ9P 1VKUA 4HKGA 1KD1Q 4F37A 1YJNP 3NY7B 3DS0A 3CCQP 1VQPP 4COPA 1UJZA 1HQBA 1X3OA 4BPHA 3G71P 2M8LA 3CPWO 2FAEA 1M74A 2K92A 3G21A 2N5IA 2KORA 4MRTC 2N6ZA 1Q82Q 1K30A 5HGNA 1VQ6P 3HYBA 2K5XA 1YIJP 3DS4A 1NJIQ 3NTEA 2KG9A 1VQNP 2PEMA 7CEIA 4DG9A 2AF8A 4XROA 3G29A 3CCRP 1K8AQ 1RO0A 5KP6B 2XZ1C 2K0XA 2JO0A 3WBHA 3CCSP 3P05A 1M6NA 2FQ1A 1EOQA 1NQ4A 3B4QA 2KW2A 4QKOA 5HGMA 2MY5A 1DV5A 2LIWA 3E2DA 2AFEA 2EFJA 2LKIA 5CZDB 5I4TG 1K73Q 2Z44A 1Q81Q 2CQ8A 4XFXA 4U0BA 4H2XC 2PEQA 2VLNA 1VQMP 1GXGA 2PNGA 1L0IA 2GDXA 4PH0A 5HVCA 3LRYA 2MVUA 2KGCA 2OTLP 2MD9A 4U0CA 5HV8A 5BS2A 4QNBA 4U0DA 3G26A 1QVGO 3CCUP 3CC2P 1YJWP 3HZQA 2EG5A 1N8RQ 4BPGA 1AF8A 3DS2A 5KP8B 4U0FA 1MZ8A 2JAZA 2JU2A 2GZGA 3RG6C 2L6EA 1IMQA 2BHVA 2KWLA 2JQ4A 1T8KA 1D1DA 2PEIA 2CG5B 5EJDA 2MVVA 3GJNA 2JGPA 2FQ0A 2ONTA 1Q7YQ 2EIAA 2EHSA 5BS1A 1VQOP 2NO8A 2KGEA 3G1IA 2DGYA 2L22A 1ZNVA 1M90Q 1KLPA 2PEJA 2LTEA 2VLPA 1A43A 2CWOA 1L0HA 1GPJA
chains in the Genus database with same CATH topology
2LIWA 2AFEA 2K2QA 2LKIA 5CZDB 2MR8A 2K93A 2CNRA 2N50A 4BPFA 3GZMA 2CQ8A 2KR5A 2N6YA 2N98A 2LL8A 4H2XC 2CGQA 4H2YC 4H2WC 2JU1A 2FADA 2K94A 2XZ0D 4R0MA 2PNGA 2AVAA 2MF4A 2EHTA 2GDWA 1L0IA 2MR7A 2GDXA 5HVCA 2KOOA 2L9FA 2MVUA 2KGCA 4CA3A 2AFDA 1ACPA 2LMLA 2MD9A 5HV8A 3EJEA 2M5RA 2KOQA 5KP7B 2QNWA 2FHSC 3GZLA 1OR5A 2KGDA 2N5HA 2DNWA 2LOLA 2FVFA 3EJDA 1VKUA 3CE7A 4HKGA 2L4BA 3NY7B 2FACA 4BPGA 2FQ2A 2VSQA 1AF8A 1HQBA 1X3OA 4BPHA 5KP8B 2JU2A 2FAEA 2ROQA 2K92A 2N5IA 4PWVB 2KOPA 2KWLA 2JQ4A 2KORA 3EJBA 4MRTC 2N6ZA 2KG6A 1T8KA 2X2BA 2GDYA 2L0QA 1DNYA 2CG5B 5EJDA 3RG2A 2KG8A 2FVEA 2MVVA 4NEOA 2JGPA 2LIUA 2FQ0A 2FVAA 1F80D 2KOSA 1HY8A 3LMOA 2KGAA 2EHSA 2KG9A 4DG9A 2KGEA 2AF8A 2LPKA 4IZ6A 2L22A 4PXHB 5KP6B 2XZ1C 1KLPA 2LTEA 2K0XA 1L0HA 2FQ1A 2K0YA 1NQ4A 2KW2A 2MY5A 1DV5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LIW A;  2AFE A;  2K2Q A;  2LKI A;  5CZD B;  2MR8 A;  2K93 A;  2CNR A;  2N50 A;  4BPF A;  3GZM A;  2CQ8 A;  2KR5 A;  2N6Y A;  2N98 A;  2LL8 A;  4H2X C;  2CGQ A;  4H2Y C;  4H2W C;  2JU1 A;  2FAD A;  2K94 A;  2XZ0 D;  4R0M A;  2PNG A;  2AVA A;  2MF4 A;  2EHT A;  2GDW A;  1L0I A;  2MR7 A;  2GDX A;  5HVC A;  2KOO A;  2L9F A;  2MVU A;  2KGC A;  4CA3 A;  2AFD A;  1ACP A;  2LML A;  2MD9 A;  5HV8 A;  3EJE A;  2M5R A;  2KOQ A;  5KP7 B;  2QNW A;  2FHS C;  3GZL A;  1OR5 A;  2KGD A;  2N5H A;  2DNW A;  2LOL A;  2FVF A;  3EJD A;  1VKU A;  3CE7 A;  4HKG A;  2L4B A;  3NY7 B;  2FAC A;  4BPG A;  2FQ2 A;  2VSQ A;  1AF8 A;  1HQB A;  1X3O A;  4BPH A;  5KP8 B;  2JU2 A;  2FAE A;  2ROQ A;  2K92 A;  2N5I A;  4PWV B;  2KOP A;  2KWL A;  2JQ4 A;  2KOR A;  3EJB A;  4MRT C;  2N6Z A;  2KG6 A;  1T8K A;  2X2B A;  2GDY A;  2L0Q A;  1DNY A;  2CG5 B;  5EJD A;  3RG2 A;  2KG8 A;  2FVE A;  2MVV A;  4NEO A;  2JGP A;  2LIU A;  2FQ0 A;  2FVA A;  1F80 D;  2KOS A;  1HY8 A;  3LMO A;  2KGA A;  2EHS A;  2KG9 A;  4DG9 A;  2KGE A;  2AF8 A;  2LPK A;  4IZ6 A;  2L22 A;  4PXH B;  5KP6 B;  2XZ1 C;  1KLP A;  2LTE A;  2K0X A;  1L0H A;  2FQ1 A;  2K0Y A;  1NQ4 A;  2KW2 A;  2MY5 A;  1DV5 A; 
#chains in the Genus database with same CATH topology
 5DCK A;  2K93 A;  2CNR A;  2N50 A;  4BPF A;  4XFZ A;  1KC8 Q;  2GZI A;  5HGO A;  4XFY A;  1VQ4 P;  2VLQ A;  2CGQ A;  2Z46 A;  3DTJ A;  2Z45 A;  4R0M A;  1RO2 A;  2MR7 A;  3I56 P;  1YI2 P;  1VHN A;  3EJE A;  1UNK A;  5KP7 B;  3GZL A;  2DNW A;  3EJD A;  1VQ7 P;  3DS1 A;  2L4B A;  4WYM A;  2FAC A;  1CEI A;  2FQ2 A;  2VSQ A;  1M1K Q;  1GXH A;  3CCM P;  1A8O A;  2PEO A;  1RNI A;  1BAJ A;  3Q20 A;  3H0D A;  2GYK A;  2PEN A;  1E6J P;  5F2K A;  3CXC O;  3CC7 P;  3H4E A;  2KOP A;  3G0V A;  3EJB A;  1Z6M A;  2L0Q A;  1DNY A;  3RG2 A;  3CME P;  2KG8 A;  1FR2 A;  1YIT P;  2FVE A;  1Q86 Q;  2LIU A;  1F80 D;  1AYI A;  2KOS A;  1HY8 A;  3H47 A;  3LMO A;  3CCL P;  1EMV A;  1EIA A;  3DS3 A;  1JJ2 O;  4UHP B;  3VRL C;  2LPK A;  4PXH B;  2QEX P;  4M0I A;  3I55 P;  3B5I A;  3G28 A;  5F2N A;  2K0Y A;  2LF4 A;  3GKL C;  1KQS O;  1E0H A;  2JYG A;  4U0E A;  2PEK A;  2KR5 A;  2N6Y A;  2WPT A;  2N98 A;  5F2O A;  2LL8 A;  3CD6 P;  4H2W C;  2P9X A;  2FAD A;  2K94 A;  2XZ0 D;  2GZF A;  1IMP A;  2AVA A;  3CCV P;  1VQ9 P;  2JYL A;  2GDW A;  3M1M A;  3DPH A;  2KOO A;  2L9F A;  3CCE P;  4CA3 A;  2M8N A;  2LML A;  2XXM A;  4GR2 A;  2QNW A;  1M6E X;  2KGD A;  2JB0 A;  3CC4 P;  3MGE A;  3CE7 A;  3U43 A;  1YHQ P;  2KOD A;  3DS5 A;  1QVF O;  4XRQ A;  2ROQ A;  2M8P A;  1S72 P;  4PWV B;  5EW5 E;  2QA4 P;  2KG6 A;  2X2B A;  2GDY A;  1VQ8 P;  3G1G A;  4NEO A;  1VQK P;  2FVA A;  2KGA A;  4GR6 A;  4PH1 A;  2GZJ A;  4IZ6 A;  2XT1 A;  1BXI A;  2XV6 A;  5HGL A;  3G6E P;  3CMA P;  4COC A;  2K2Q A;  2MR8 A;  1K9M Q;  2E1M A;  4U0A A;  2OTJ P;  3GZM A;  1ZMB A;  2PY8 A;  4IPY A;  1IUQ A;  4H2Y C;  3CCJ P;  2JU1 A;  2VLO A;  1VQ5 P;  2MF4 A;  2JBG A;  2GZE A;  2EHT A;  5JPA A;  1W2B O;  2ERH A;  2OAR A;  1QRJ A;  1ACP A;  2AFD A;  3G4S P;  2BUO A;  3OW2 O;  1VQL P;  1AUM A;  2M5R A;  2KOQ A;  2K0D X;  2FHS C;  1OR5 A;  2N5H A;  2LOL A;  2FVF A;  1YJ9 P;  1VKU A;  4HKG A;  1KD1 Q;  4F37 A;  1YJN P;  3NY7 B;  3DS0 A;  3CCQ P;  1VQP P;  4COP A;  1UJZ A;  1HQB A;  1X3O A;  4BPH A;  3G71 P;  2M8L A;  3CPW O;  2FAE A;  1M74 A;  2K92 A;  3G21 A;  2N5I A;  2KOR A;  4MRT C;  2N6Z A;  1Q82 Q;  1K30 A;  5HGN A;  1VQ6 P;  3HYB A;  2K5X A;  1YIJ P;  3DS4 A;  1NJI Q;  3NTE A;  2KG9 A;  1VQN P;  2PEM A;  7CEI A;  4DG9 A;  2AF8 A;  4XRO A;  3G29 A;  3CCR P;  1K8A Q;  1RO0 A;  5KP6 B;  2XZ1 C;  2K0X A;  2JO0 A;  3WBH A;  3CCS P;  3P05 A;  1M6N A;  2FQ1 A;  1EOQ A;  1NQ4 A;  3B4Q A;  2KW2 A;  4QKO A;  5HGM A;  2MY5 A;  1DV5 A;  2LIW A;  3E2D A;  2AFE A;  2EFJ A;  2LKI A;  5CZD B;  5I4T G;  1K73 Q;  2Z44 A;  1Q81 Q;  2CQ8 A;  4XFX A;  4U0B A;  4H2X C;  2PEQ A;  2VLN A;  1VQM P;  1GXG A;  2PNG A;  1L0I A;  2GDX A;  4PH0 A;  5HVC A;  3LRY A;  2MVU A;  2KGC A;  2OTL P;  2MD9 A;  4U0C A;  5HV8 A;  5BS2 A;  4QNB A;  4U0D A;  3G26 A;  1QVG O;  3CCU P;  3CC2 P;  1YJW P;  3HZQ A;  2EG5 A;  1N8R Q;  4BPG A;  1AF8 A;  3DS2 A;  5KP8 B;  4U0F A;  1MZ8 A;  2JAZ A;  2JU2 A;  2GZG A;  3RG6 C;  2L6E A;  1IMQ A;  2BHV A;  2KWL A;  2JQ4 A;  1T8K A;  1D1D A;  2PEI A;  2CG5 B;  5EJD A;  2MVV A;  3GJN A;  2JGP A;  2FQ0 A;  2ONT A;  1Q7Y Q;  2EIA A;  2EHS A;  5BS1 A;  1VQO P;  2NO8 A;  2KGE A;  3G1I A;  2DGY A;  2L22 A;  1ZNV A;  1M90 Q;  1KLP A;  2PEJ A;  2LTE A;  2VLP A;  1A43 A;  2CWO A;  1L0H A;  1GPJ A; 
#chains in the Genus database with same CATH homology
 2LIW A;  2AFE A;  2K2Q A;  2LKI A;  5CZD B;  2MR8 A;  2K93 A;  2CNR A;  2N50 A;  4BPF A;  3GZM A;  2CQ8 A;  2KR5 A;  2N6Y A;  2N98 A;  2LL8 A;  4H2X C;  2CGQ A;  4H2Y C;  4H2W C;  2JU1 A;  2FAD A;  2K94 A;  2XZ0 D;  4R0M A;  2PNG A;  2AVA A;  2MF4 A;  2EHT A;  2GDW A;  1L0I A;  2MR7 A;  2GDX A;  5HVC A;  2KOO A;  2L9F A;  2MVU A;  2KGC A;  4CA3 A;  2AFD A;  1ACP A;  2LML A;  2MD9 A;  5HV8 A;  3EJE A;  2M5R A;  2KOQ A;  5KP7 B;  2QNW A;  2FHS C;  3GZL A;  1OR5 A;  2KGD A;  2N5H A;  2DNW A;  2LOL A;  2FVF A;  3EJD A;  1VKU A;  3CE7 A;  4HKG A;  2L4B A;  3NY7 B;  2FAC A;  4BPG A;  2FQ2 A;  2VSQ A;  1AF8 A;  1HQB A;  1X3O A;  4BPH A;  5KP8 B;  2JU2 A;  2FAE A;  2ROQ A;  2K92 A;  2N5I A;  4PWV B;  2KOP A;  2KWL A;  2JQ4 A;  2KOR A;  3EJB A;  4MRT C;  2N6Z A;  2KG6 A;  1T8K A;  2X2B A;  2GDY A;  2L0Q A;  1DNY A;  2CG5 B;  5EJD A;  3RG2 A;  2KG8 A;  2FVE A;  2MVV A;  4NEO A;  2JGP A;  2LIU A;  2FQ0 A;  2FVA A;  1F80 D;  2KOS A;  1HY8 A;  3LMO A;  2KGA A;  2EHS A;  2KG9 A;  4DG9 A;  2KGE A;  2AF8 A;  2LPK A;  4IZ6 A;  2L22 A;  4PXH B;  5KP6 B;  2XZ1 C;  1KLP A;  2LTE A;  2K0X A;  1L0H A;  2FQ1 A;  2K0Y A;  1NQ4 A;  2KW2 A;  2MY5 A;  1DV5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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