2KKNA

Solution nmr structure of themotoga maritima protein tm1076: northeast structural genomics consortium target vt57
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
157
structure length
157
Chain Sequence
VKRFLLISDSHVPVRMASLPDEILNSLKEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNMDYPDVKEHLPFSKVLLVEGVTIGMCHGWGAPWDLKDRLLKVFNEKPQVILFGHTHEPEDTVKAGVRFLNPGSLAEGSYAVLELDGGEVRFELKTL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
source organism Thermotoga maritima
publication title Solution NMR structure of Themotoga maritima protein TM1076
rcsb
molecule keywords Uncharacterized protein
total genus 30
structure length 157
sequence length 157
ec nomenclature
pdb deposition date 2009-06-26
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2kknA00
1S8EA 4H2IA 1JK7A 2P6BA 4I5NC 3PSNA 1Z2XA 1S3LA 2GJUA 1U32A 4B2OA 2Z72A 5DNYA 1HPUA 3CK2A 4HD0A 1S95A 1OI8A 1II7A 3H67A 4H1SA 1UTEA 4DHLA 4J6OA 4ORBA 1XZWA 2QFRA 2Z1AA 4YKEA 1USHA 3IVEA 2Q8UA 4FCXA 2NPPC 4H2BA 4DSYA 5IOHA 2XMOA 4I5LC 2AHDA 2O8AA 4LU9A 5HPEA 3K7VC 3T1IA 3DSCA 1AUIA 3THOB 2USHA 2HYPA 3QFOA 1S3MA 3ICFA 3RL3A 1T71A 4LTYA 2O8GA 2BCDA 2KKNA 4FBWA 1T70A 4ORAA 1XM7A 2HYOA 3H62B 4UT3A 2ZBMA 4TUIA 2BQ8X 1HP1A 4Q7FA 3THNA 1WARA 2A22A 2NYLC 3H63A 3GVEA 1HO5A 4IL1A 1M63A 4JA9A 1TCOA 2WDDA 5C1VA 4O43A 3RQZA 4V0XA 4UWQA 3C5WC 5JPFA 3QG5C 4V0WA 4MOYA 1S70A 4O5GA 2IE3C 3H61A 4MOVA 3DSDA 4DT2A 3EGHA 3PSOA 4ZVZA 1UF3A 5EQVA 2WDEA 5F3WA 3QFKA 3HVQA 1V73A 1MF8A 3FGAC 3H66A 4ORCA 3LL8A 4JA7A 3H68A 4ZX2A 2IAEC 3IVDA 4UT3B 3EGGA 4OR9A 2WDCA 5JPEA 4F0ZA 5B8IA 3ZU0A 4M0VA 2DFJA 3V4YA 1KBPA 3RL5A 1S3NA 3H64A 3AUZA 4O4KA 3P71C 4KBPA 4MP0A 5J28A 3TGHA 2R17A 2JOGA 3AV0A 4O24A 4LACC 3ZTVA 2HY1A 4V0VA 1FJMA 4FBKA 2NYMC 1OIEA 1IT6A 1OIDA 3DW8C 1NNWA 4H1YP 3E7AA 4G9JA 2BDXA 4TUGA 4KKZA 4WWLA 1G5BA 1SU1A 5JJTA 1W24A 1QHWA 5GTUA 4XPNA 4IYPC 2WDFA 3E7BA 4UT2A 3IB7A 2QJCA 3RL4A 4H2GA 3QFMA 1Z2WA 2QFPA 4NZVA 3KBPA 1WAO1 3JYFA 3H60A 3N5UA 1QFCA 3K7WC 2NXFA 3QFNA 3H69A 5INBA 2YVTA 2CV9A 3C9FA 3IB8A 4FBQA 4H2FA 2Z06A 2IE4C
chains in the Genus database with same CATH superfamily
1S8EA 4H2IA 1JK7A 2P6BA 4I5NC 3PSNA 1Z2XA 1S3LA 2GJUA 2ZO9B 1U32A 4B2OA 2Z72A 5DNYA 1HPUA 3CK2A 4HD0A 1S95A 1OI8A 1II7A 3H67A 4H1SA 1UTEA 4DHLA 4J6OA 4ORBA 1XZWA 2QFRA 2Z1AA 4YKEA 1USHA 3IVEA 2Q8UA 4FCXA 2NPPC 4H2BA 4DSYA 5IOHA 2XMOA 4I5LC 2AHDA 2O8AA 4LU9A 5HPEA 3K7VC 3T1IA 3DSCA 1AUIA 3THOB 2USHA 2HYPA 3QFOA 1S3MA 3ICFA 3RL3A 1T71A 4LTYA 2O8GA 2BCDA 2KKNA 4FBWA 1T70A 4ORAA 1XM7A 2HYOA 3H62B 4UT3A 2ZBMA 3FLOA 4TUIA 2BQ8X 1HP1A 4Q7FA 3E0JA 3THNA 1WARA 2A22A 2NYLC 3H63A 3GVEA 1HO5A 4IL1A 1M63A 4JA9A 1TCOA 2WDDA 2YEQA 5C1VA 4O43A 3RQZA 4V0XA 4UWQA 3C5WC 5JPFA 3QG5C 4V0WA 4MOYA 1S70A 4O5GA 2IE3C 3H61A 4MOVA 3DSDA 4DT2A 3EGHA 3PSOA 4ZVZA 1UF3A 5EQVA 2WDEA 5F3WA 3QFKA 2DXLA 3HVQA 1V73A 1MF8A 3FGAC 3H66A 4ORCA 3LL8A 4JA7A 3H68A 4ZX2A 2IAEC 3IVDA 4UT3B 3EGGA 4OR9A 2WDCA 5JPEA 4F0ZA 5B8IA 3ZU0A 4M0VA 2DFJA 3V4YA 1KBPA 3RL5A 1S3NA 3H64A 3AUZA 4O4KA 3P71C 4KBPA 4MP0A 5J28A 3TGHA 2R17A 2JOGA 3AV0A 4O24A 4LACC 3ZTVA 2HY1A 4V0VA 1FJMA 3D03A 4FBKA 2NYMC 1OIEA 1IT6A 1OIDA 3DW8C 1NNWA 4H1YP 3E7AA 4G9JA 2BDXA 4TUGA 4KKZA 4WWLA 1G5BA 1SU1A 5JJTA 2DXNA 1W24A 1QHWA 5GTUA 4XPNA 4IYPC 2WDFA 3E7BA 4UT2A 3IB7A 2QJCA 3RL4A 4H2GA 3QFMA 1Z2WA 2QFPA 4NZVA 3KBPA 1WAO1 3JYFA 3H60A 3N5UA 1QFCA 3K7WC 2NXFA 3QFNA 3H69A 5INBA 2YVTA 2ZOAA 2CV9A 3C9FA 3IB8A 4FBQA 4H2FA 2Z06A 2IE4C
chains in the Genus database with same CATH topology
1S8EA 4H2IA 1JK7A 2P6BA 4I5NC 3PSNA 1Z2XA 1S3LA 2GJUA 2ZO9B 1U32A 4B2OA 2Z72A 5DNYA 1HPUA 3CK2A 4HD0A 1S95A 1OI8A 1II7A 3H67A 4H1SA 1UTEA 4DHLA 4J6OA 4ORBA 1XZWA 2QFRA 2Z1AA 4YKEA 1USHA 3IVEA 2Q8UA 4FCXA 2NPPC 4H2BA 4DSYA 5IOHA 2XMOA 4I5LC 2AHDA 2O8AA 4LU9A 5HPEA 3K7VC 3T1IA 3DSCA 1AUIA 3THOB 2USHA 2HYPA 3QFOA 1S3MA 3ICFA 3RL3A 1T71A 4LTYA 2O8GA 2BCDA 2KKNA 4FBWA 1T70A 4ORAA 1XM7A 2HYOA 3H62B 4UT3A 2ZBMA 3FLOA 4TUIA 2BQ8X 1HP1A 4Q7FA 3E0JA 3THNA 1WARA 2A22A 2NYLC 3H63A 3GVEA 1HO5A 4IL1A 1M63A 4JA9A 1TCOA 2WDDA 2YEQA 5C1VA 4O43A 3RQZA 4V0XA 4UWQA 3C5WC 5JPFA 3QG5C 4V0WA 4MOYA 1S70A 4O5GA 2IE3C 3H61A 4MOVA 3DSDA 4DT2A 3EGHA 3PSOA 4ZVZA 1UF3A 5EQVA 2WDEA 5F3WA 3QFKA 2DXLA 3HVQA 1V73A 1MF8A 3FGAC 3H66A 4ORCA 3LL8A 4JA7A 3H68A 4ZX2A 2IAEC 3IVDA 4UT3B 3EGGA 4OR9A 2WDCA 5JPEA 4F0ZA 5B8IA 3ZU0A 4M0VA 2DFJA 3V4YA 1KBPA 3RL5A 1S3NA 3H64A 3AUZA 4O4KA 3P71C 4KBPA 4MP0A 5J28A 3TGHA 2R17A 2JOGA 3AV0A 4O24A 4LACC 3ZTVA 2HY1A 4V0VA 1FJMA 3D03A 4FBKA 2NYMC 1OIEA 1IT6A 1OIDA 3DW8C 1NNWA 4H1YP 3E7AA 4G9JA 2BDXA 4TUGA 4KKZA 4WWLA 1G5BA 1SU1A 5JJTA 2DXNA 1W24A 1QHWA 5GTUA 4XPNA 4IYPC 2WDFA 3E7BA 4UT2A 3IB7A 2QJCA 3RL4A 4H2GA 3QFMA 1Z2WA 2QFPA 4NZVA 3KBPA 1WAO1 3JYFA 3H60A 3N5UA 1QFCA 3K7WC 2NXFA 3QFNA 3H69A 5INBA 2YVTA 2ZOAA 2CV9A 3C9FA 3IB8A 4FBQA 4H2FA 2Z06A 2IE4C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1S8E A;  4H2I A;  1JK7 A;  2P6B A;  4I5N C;  3PSN A;  1Z2X A;  1S3L A;  2GJU A;  1U32 A;  4B2O A;  2Z72 A;  5DNY A;  1HPU A;  3CK2 A;  4HD0 A;  1S95 A;  1OI8 A;  1II7 A;  3H67 A;  4H1S A;  1UTE A;  4DHL A;  4J6O A;  4ORB A;  1XZW A;  2QFR A;  2Z1A A;  4YKE A;  1USH A;  3IVE A;  2Q8U A;  4FCX A;  2NPP C;  4H2B A;  4DSY A;  5IOH A;  2XMO A;  4I5L C;  2AHD A;  2O8A A;  4LU9 A;  5HPE A;  3K7V C;  3T1I A;  3DSC A;  1AUI A;  3THO B;  2USH A;  2HYP A;  3QFO A;  1S3M A;  3ICF A;  3RL3 A;  1T71 A;  4LTY A;  2O8G A;  2BCD A;  2KKN A;  4FBW A;  1T70 A;  4ORA A;  1XM7 A;  2HYO A;  3H62 B;  4UT3 A;  2ZBM A;  4TUI A;  2BQ8 X;  1HP1 A;  4Q7F A;  3THN A;  1WAR A;  2A22 A;  2NYL C;  3H63 A;  3GVE A;  1HO5 A;  4IL1 A;  1M63 A;  4JA9 A;  1TCO A;  2WDD A;  5C1V A;  4O43 A;  3RQZ A;  4V0X A;  4UWQ A;  3C5W C;  5JPF A;  3QG5 C;  4V0W A;  4MOY A;  1S70 A;  4O5G A;  2IE3 C;  3H61 A;  4MOV A;  3DSD A;  4DT2 A;  3EGH A;  3PSO A;  4ZVZ A;  1UF3 A;  5EQV A;  2WDE A;  5F3W A;  3QFK A;  3HVQ A;  1V73 A;  1MF8 A;  3FGA C;  3H66 A;  4ORC A;  3LL8 A;  4JA7 A;  3H68 A;  4ZX2 A;  2IAE C;  3IVD A;  4UT3 B;  3EGG A;  4OR9 A;  2WDC A;  5JPE A;  4F0Z A;  5B8I A;  3ZU0 A;  4M0V A;  2DFJ A;  3V4Y A;  1KBP A;  3RL5 A;  1S3N A;  3H64 A;  3AUZ A;  4O4K A;  3P71 C;  4KBP A;  4MP0 A;  5J28 A;  3TGH A;  2R17 A;  2JOG A;  3AV0 A;  4O24 A;  4LAC C;  3ZTV A;  2HY1 A;  4V0V A;  1FJM A;  4FBK A;  2NYM C;  1OIE A;  1IT6 A;  1OID A;  3DW8 C;  1NNW A;  4H1Y P;  3E7A A;  4G9J A;  2BDX A;  4TUG A;  4KKZ A;  4WWL A;  1G5B A;  1SU1 A;  5JJT A;  1W24 A;  1QHW A;  5GTU A;  4XPN A;  4IYP C;  2WDF A;  3E7B A;  4UT2 A;  3IB7 A;  2QJC A;  3RL4 A;  4H2G A;  3QFM A;  1Z2W A;  2QFP A;  4NZV A;  3KBP A;  1WAO 1;  3JYF A;  3H60 A;  3N5U A;  1QFC A;  3K7W C;  2NXF A;  3QFN A;  3H69 A;  5INB A;  2YVT A;  2CV9 A;  3C9F A;  3IB8 A;  4FBQ A;  4H2F A;  2Z06 A;  2IE4 C; 
#chains in the Genus database with same CATH topology
 1S8E A;  4H2I A;  1JK7 A;  2P6B A;  4I5N C;  3PSN A;  1Z2X A;  1S3L A;  2GJU A;  2ZO9 B;  1U32 A;  4B2O A;  2Z72 A;  5DNY A;  1HPU A;  3CK2 A;  4HD0 A;  1S95 A;  1OI8 A;  1II7 A;  3H67 A;  4H1S A;  1UTE A;  4DHL A;  4J6O A;  4ORB A;  1XZW A;  2QFR A;  2Z1A A;  4YKE A;  1USH A;  3IVE A;  2Q8U A;  4FCX A;  2NPP C;  4H2B A;  4DSY A;  5IOH A;  2XMO A;  4I5L C;  2AHD A;  2O8A A;  4LU9 A;  5HPE A;  3K7V C;  3T1I A;  3DSC A;  1AUI A;  3THO B;  2USH A;  2HYP A;  3QFO A;  1S3M A;  3ICF A;  3RL3 A;  1T71 A;  4LTY A;  2O8G A;  2BCD A;  2KKN A;  4FBW A;  1T70 A;  4ORA A;  1XM7 A;  2HYO A;  3H62 B;  4UT3 A;  2ZBM A;  3FLO A;  4TUI A;  2BQ8 X;  1HP1 A;  4Q7F A;  3E0J A;  3THN A;  1WAR A;  2A22 A;  2NYL C;  3H63 A;  3GVE A;  1HO5 A;  4IL1 A;  1M63 A;  4JA9 A;  1TCO A;  2WDD A;  2YEQ A;  5C1V A;  4O43 A;  3RQZ A;  4V0X A;  4UWQ A;  3C5W C;  5JPF A;  3QG5 C;  4V0W A;  4MOY A;  1S70 A;  4O5G A;  2IE3 C;  3H61 A;  4MOV A;  3DSD A;  4DT2 A;  3EGH A;  3PSO A;  4ZVZ A;  1UF3 A;  5EQV A;  2WDE A;  5F3W A;  3QFK A;  2DXL A;  3HVQ A;  1V73 A;  1MF8 A;  3FGA C;  3H66 A;  4ORC A;  3LL8 A;  4JA7 A;  3H68 A;  4ZX2 A;  2IAE C;  3IVD A;  4UT3 B;  3EGG A;  4OR9 A;  2WDC A;  5JPE A;  4F0Z A;  5B8I A;  3ZU0 A;  4M0V A;  2DFJ A;  3V4Y A;  1KBP A;  3RL5 A;  1S3N A;  3H64 A;  3AUZ A;  4O4K A;  3P71 C;  4KBP A;  4MP0 A;  5J28 A;  3TGH A;  2R17 A;  2JOG A;  3AV0 A;  4O24 A;  4LAC C;  3ZTV A;  2HY1 A;  4V0V A;  1FJM A;  3D03 A;  4FBK A;  2NYM C;  1OIE A;  1IT6 A;  1OID A;  3DW8 C;  1NNW A;  4H1Y P;  3E7A A;  4G9J A;  2BDX A;  4TUG A;  4KKZ A;  4WWL A;  1G5B A;  1SU1 A;  5JJT A;  2DXN A;  1W24 A;  1QHW A;  5GTU A;  4XPN A;  4IYP C;  2WDF A;  3E7B A;  4UT2 A;  3IB7 A;  2QJC A;  3RL4 A;  4H2G A;  3QFM A;  1Z2W A;  2QFP A;  4NZV A;  3KBP A;  1WAO 1;  3JYF A;  3H60 A;  3N5U A;  1QFC A;  3K7W C;  2NXF A;  3QFN A;  3H69 A;  5INB A;  2YVT A;  2ZOA A;  2CV9 A;  3C9F A;  3IB8 A;  4FBQ A;  4H2F A;  2Z06 A;  2IE4 C; 
#chains in the Genus database with same CATH homology
 1S8E A;  4H2I A;  1JK7 A;  2P6B A;  4I5N C;  3PSN A;  1Z2X A;  1S3L A;  2GJU A;  2ZO9 B;  1U32 A;  4B2O A;  2Z72 A;  5DNY A;  1HPU A;  3CK2 A;  4HD0 A;  1S95 A;  1OI8 A;  1II7 A;  3H67 A;  4H1S A;  1UTE A;  4DHL A;  4J6O A;  4ORB A;  1XZW A;  2QFR A;  2Z1A A;  4YKE A;  1USH A;  3IVE A;  2Q8U A;  4FCX A;  2NPP C;  4H2B A;  4DSY A;  5IOH A;  2XMO A;  4I5L C;  2AHD A;  2O8A A;  4LU9 A;  5HPE A;  3K7V C;  3T1I A;  3DSC A;  1AUI A;  3THO B;  2USH A;  2HYP A;  3QFO A;  1S3M A;  3ICF A;  3RL3 A;  1T71 A;  4LTY A;  2O8G A;  2BCD A;  2KKN A;  4FBW A;  1T70 A;  4ORA A;  1XM7 A;  2HYO A;  3H62 B;  4UT3 A;  2ZBM A;  3FLO A;  4TUI A;  2BQ8 X;  1HP1 A;  4Q7F A;  3E0J A;  3THN A;  1WAR A;  2A22 A;  2NYL C;  3H63 A;  3GVE A;  1HO5 A;  4IL1 A;  1M63 A;  4JA9 A;  1TCO A;  2WDD A;  2YEQ A;  5C1V A;  4O43 A;  3RQZ A;  4V0X A;  4UWQ A;  3C5W C;  5JPF A;  3QG5 C;  4V0W A;  4MOY A;  1S70 A;  4O5G A;  2IE3 C;  3H61 A;  4MOV A;  3DSD A;  4DT2 A;  3EGH A;  3PSO A;  4ZVZ A;  1UF3 A;  5EQV A;  2WDE A;  5F3W A;  3QFK A;  2DXL A;  3HVQ A;  1V73 A;  1MF8 A;  3FGA C;  3H66 A;  4ORC A;  3LL8 A;  4JA7 A;  3H68 A;  4ZX2 A;  2IAE C;  3IVD A;  4UT3 B;  3EGG A;  4OR9 A;  2WDC A;  5JPE A;  4F0Z A;  5B8I A;  3ZU0 A;  4M0V A;  2DFJ A;  3V4Y A;  1KBP A;  3RL5 A;  1S3N A;  3H64 A;  3AUZ A;  4O4K A;  3P71 C;  4KBP A;  4MP0 A;  5J28 A;  3TGH A;  2R17 A;  2JOG A;  3AV0 A;  4O24 A;  4LAC C;  3ZTV A;  2HY1 A;  4V0V A;  1FJM A;  3D03 A;  4FBK A;  2NYM C;  1OIE A;  1IT6 A;  1OID A;  3DW8 C;  1NNW A;  4H1Y P;  3E7A A;  4G9J A;  2BDX A;  4TUG A;  4KKZ A;  4WWL A;  1G5B A;  1SU1 A;  5JJT A;  2DXN A;  1W24 A;  1QHW A;  5GTU A;  4XPN A;  4IYP C;  2WDF A;  3E7B A;  4UT2 A;  3IB7 A;  2QJC A;  3RL4 A;  4H2G A;  3QFM A;  1Z2W A;  2QFP A;  4NZV A;  3KBP A;  1WAO 1;  3JYF A;  3H60 A;  3N5U A;  1QFC A;  3K7W C;  2NXF A;  3QFN A;  3H69 A;  5INB A;  2YVT A;  2ZOA A;  2CV9 A;  3C9F A;  3IB8 A;  4FBQ A;  4H2F A;  2Z06 A;  2IE4 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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