2KKNA

Solution nmr structure of themotoga maritima protein tm1076: northeast structural genomics consortium target vt57
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
157
structure length
157
Chain Sequence
b'VKRFLLISDSHVPVRMASLPDEILNSLKEYDGVIGLGDYVDLDTVILLEKFSKEFYGVHGNMDYPDVKEHLPFSKVLLVEGVTIGMCHGWGAPWDLKDRLLKVFNEKPQVILFGHTHEPEDTVKAGVRFLNPGSLAEGSYAVLELDGGEVRFELKTL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution NMR structure of Themotoga maritima protein TM1076
rcsb
molecule keywords Uncharacterized protein
source organism Thermotoga maritima
molecule tags Structural genomics, unknown function
total genus 30
structure length 157
sequence length 157
ec nomenclature
pdb deposition date 2009-06-26
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2kknA00
4ORAA 2CV9A 3H67A 4TUGA 4FBKA 2R17A 3H62B 2KKNA 3DW8C 3FGAC 4LU9A 2WDDA 3C9FA 2Z06A 1IT6A 3JYFA 3K7WC 2O8AA 3PSNA 1MF8A 1USHA 4H2BA 5F3WA 1W24A 3DSCA 3N5UA 2NYLC 1XZWA 1V73A 1Z2XA 2P6BA 4I5NC 1HP1A 4KKZA 1WARA 1QHWA 3T1IA 3E7AA 1JK7A 2IE4C 2DFJA 3QG5C 5JPEA 1U32A 4IYPC 4O43A 3ICFA 4O4KA 4YKEA 3THNA 3EGGA 4FBQA 3H64A 1S70A 2WDCA 1SU1A 4LACC 2BQ8X 3H60A 1HO5A 3TGHA 4UT3B 4ZX2A 1UTEA 4MP0A 1OIDA 1HPUA 4TUIA 5JJTA 2QJCA 4G9JA 2A22A 5EQVA 2WDEA 3CK2A 2YVTA 3H61A 1T70A 2JOGA 3IVDA 4H1SA 2IE3C 5B8IA 3P71C 3H68A 4FCXA 2NXFA 3H63A 5C1VA 3ZTVA 4KBPA 3QFKA 1S3LA 3IB7A 2GJUA 2Z72A 3LL8A 2XMOA 2IAEC 4WWLA 3RL5A 1AUIA 3DSDA 1FJMA 1KBPA 2ZBMA 4H1YP 2NPPC 2Q8UA 4UT2A 3RL3A 1TCOA 4DHLA 1S95A 3QFOA 4O5GA 4MOYA 3RQZA 4Q7FA 2BCDA 5J28A 4V0WA 1XM7A 3IB8A 2USHA 4UT3A 1II7A 1M63A 3C5WC 4JA9A 4O24A 3KBPA 3K7VC 1OIEA 4NZVA 2WDFA 5DNYA 3ZU0A 1WAO1 4DT2A 4ORBA 1UF3A 4ORCA 3E7BA 2AHDA 1S3MA 3H69A 4UWQA 3IVEA 3GVEA 4DSYA 1S3NA 1S8EA 4IL1A 4FBWA 5HPEA 2BDXA 3THOB 3V4YA 4OR9A 1Z2WA 4JA7A 2HY1A 3HVQA 2QFPA 2HYPA 4LTYA 2HYOA 2O8GA 1OI8A 1QFCA 3RL4A 3AUZA 4ZVZA 4V0XA 2NYMC 4XPNA 4F0ZA 1NNWA 4H2GA 2QFRA 4B2OA 3PSOA 4M0VA 3AV0A 1G5BA 3QFMA 3QFNA 1T71A 4H2FA 4H2IA 4I5LC 4J6OA 3EGHA 4MOVA 5IOHA 5JPFA 5GTUA 3H66A 4HD0A 5INBA 2Z1AA 4V0VA
chains in the Genus database with same CATH superfamily
4ORAA 2CV9A 3H67A 4TUGA 4FBKA 2R17A 3H62B 2KKNA 3DW8C 3FGAC 4LU9A 2WDDA 3C9FA 2Z06A 1IT6A 3JYFA 3K7WC 2O8AA 3PSNA 1MF8A 1USHA 4H2BA 5F3WA 1W24A 3DSCA 3N5UA 2NYLC 1XZWA 3D03A 1V73A 1Z2XA 2P6BA 4I5NC 1HP1A 4KKZA 1WARA 2DXNA 1QHWA 3T1IA 3E7AA 1JK7A 2IE4C 2DFJA 3QG5C 5JPEA 1U32A 4IYPC 4O43A 3ICFA 4O4KA 4YKEA 3THNA 3EGGA 4FBQA 3H64A 1S70A 2WDCA 1SU1A 4LACC 2BQ8X 3H60A 1HO5A 3TGHA 4UT3B 4ZX2A 1UTEA 4MP0A 1OIDA 1HPUA 4TUIA 5JJTA 2QJCA 4G9JA 2A22A 5EQVA 2WDEA 3CK2A 2YVTA 3H61A 1T70A 2JOGA 3IVDA 4H1SA 2IE3C 5B8IA 3P71C 2ZOAA 3FLOA 3H68A 4FCXA 2NXFA 3H63A 5C1VA 3ZTVA 4KBPA 3QFKA 1S3LA 3IB7A 2GJUA 2Z72A 3LL8A 2XMOA 2IAEC 4WWLA 3RL5A 1AUIA 3DSDA 1FJMA 1KBPA 2ZBMA 4H1YP 2NPPC 2Q8UA 4UT2A 3RL3A 1TCOA 4DHLA 1S95A 3QFOA 4O5GA 4MOYA 3RQZA 4Q7FA 2BCDA 5J28A 4V0WA 1XM7A 3E0JA 3IB8A 2USHA 2ZO9B 4UT3A 1II7A 1M63A 3C5WC 4JA9A 4O24A 3KBPA 3K7VC 1OIEA 4NZVA 2WDFA 5DNYA 3ZU0A 1WAO1 4DT2A 2DXLA 4ORBA 1UF3A 4ORCA 3E7BA 2AHDA 1S3MA 3H69A 4UWQA 3IVEA 3GVEA 4DSYA 1S3NA 1S8EA 4IL1A 4FBWA 5HPEA 2BDXA 3THOB 3V4YA 4OR9A 1Z2WA 4JA7A 2HY1A 3HVQA 2QFPA 2HYPA 4LTYA 2HYOA 2O8GA 1OI8A 1QFCA 3RL4A 3AUZA 4ZVZA 4V0XA 2NYMC 2YEQA 4XPNA 4F0ZA 1NNWA 4H2GA 2QFRA 4B2OA 3PSOA 4M0VA 3AV0A 1G5BA 3QFMA 3QFNA 1T71A 4H2FA 4H2IA 4I5LC 4J6OA 3EGHA 4MOVA 5IOHA 5JPFA 5GTUA 3H66A 4HD0A 5INBA 2Z1AA 4V0VA
chains in the Genus database with same CATH topology
4ORAA 2CV9A 3H67A 4TUGA 4FBKA 2R17A 3H62B 2KKNA 3DW8C 3FGAC 4LU9A 2WDDA 3C9FA 2Z06A 1IT6A 3JYFA 3K7WC 2O8AA 3PSNA 1MF8A 1USHA 4H2BA 5F3WA 1W24A 3DSCA 3N5UA 2NYLC 1XZWA 3D03A 1V73A 1Z2XA 2P6BA 4I5NC 1HP1A 4KKZA 1WARA 2DXNA 1QHWA 3T1IA 3E7AA 1JK7A 2IE4C 2DFJA 3QG5C 5JPEA 1U32A 4IYPC 4O43A 3ICFA 4O4KA 4YKEA 3THNA 3EGGA 4FBQA 3H64A 1S70A 2WDCA 1SU1A 4LACC 2BQ8X 3H60A 1HO5A 3TGHA 4UT3B 4ZX2A 1UTEA 4MP0A 1OIDA 1HPUA 4TUIA 5JJTA 2QJCA 4G9JA 2A22A 5EQVA 2WDEA 3CK2A 2YVTA 3H61A 1T70A 2JOGA 3IVDA 4H1SA 2IE3C 5B8IA 3P71C 2ZOAA 3FLOA 3H68A 4FCXA 2NXFA 3H63A 5C1VA 3ZTVA 4KBPA 3QFKA 1S3LA 3IB7A 2GJUA 2Z72A 3LL8A 2XMOA 2IAEC 4WWLA 3RL5A 1AUIA 3DSDA 1FJMA 1KBPA 2ZBMA 4H1YP 2NPPC 2Q8UA 4UT2A 3RL3A 1TCOA 4DHLA 1S95A 3QFOA 4O5GA 4MOYA 3RQZA 4Q7FA 2BCDA 5J28A 4V0WA 1XM7A 3E0JA 3IB8A 2USHA 2ZO9B 4UT3A 1II7A 1M63A 3C5WC 4JA9A 4O24A 3KBPA 3K7VC 1OIEA 4NZVA 2WDFA 5DNYA 3ZU0A 1WAO1 4DT2A 2DXLA 4ORBA 1UF3A 4ORCA 3E7BA 2AHDA 1S3MA 3H69A 4UWQA 3IVEA 3GVEA 4DSYA 1S3NA 1S8EA 4IL1A 4FBWA 5HPEA 2BDXA 3THOB 3V4YA 4OR9A 1Z2WA 4JA7A 2HY1A 3HVQA 2QFPA 2HYPA 4LTYA 2HYOA 2O8GA 1OI8A 1QFCA 3RL4A 3AUZA 4ZVZA 4V0XA 2NYMC 2YEQA 4XPNA 4F0ZA 1NNWA 4H2GA 2QFRA 4B2OA 3PSOA 4M0VA 3AV0A 1G5BA 3QFMA 3QFNA 1T71A 4H2FA 4H2IA 4I5LC 4J6OA 3EGHA 4MOVA 5IOHA 5JPFA 5GTUA 3H66A 4HD0A 5INBA 2Z1AA 4V0VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ORA A;  2CV9 A;  3H67 A;  4TUG A;  4FBK A;  2R17 A;  3H62 B;  2KKN A;  3DW8 C;  3FGA C;  4LU9 A;  2WDD A;  3C9F A;  2Z06 A;  1IT6 A;  3JYF A;  3K7W C;  2O8A A;  3PSN A;  1MF8 A;  1USH A;  4H2B A;  5F3W A;  1W24 A;  3DSC A;  3N5U A;  2NYL C;  1XZW A;  1V73 A;  1Z2X A;  2P6B A;  4I5N C;  1HP1 A;  4KKZ A;  1WAR A;  1QHW A;  3T1I A;  3E7A A;  1JK7 A;  2IE4 C;  2DFJ A;  3QG5 C;  5JPE A;  1U32 A;  4IYP C;  4O43 A;  3ICF A;  4O4K A;  4YKE A;  3THN A;  3EGG A;  4FBQ A;  3H64 A;  1S70 A;  2WDC A;  1SU1 A;  4LAC C;  2BQ8 X;  3H60 A;  1HO5 A;  3TGH A;  4UT3 B;  4ZX2 A;  1UTE A;  4MP0 A;  1OID A;  1HPU A;  4TUI A;  5JJT A;  2QJC A;  4G9J A;  2A22 A;  5EQV A;  2WDE A;  3CK2 A;  2YVT A;  3H61 A;  1T70 A;  2JOG A;  3IVD A;  4H1S A;  2IE3 C;  5B8I A;  3P71 C;  3H68 A;  4FCX A;  2NXF A;  3H63 A;  5C1V A;  3ZTV A;  4KBP A;  3QFK A;  1S3L A;  3IB7 A;  2GJU A;  2Z72 A;  3LL8 A;  2XMO A;  2IAE C;  4WWL A;  3RL5 A;  1AUI A;  3DSD A;  1FJM A;  1KBP A;  2ZBM A;  4H1Y P;  2NPP C;  2Q8U A;  4UT2 A;  3RL3 A;  1TCO A;  4DHL A;  1S95 A;  3QFO A;  4O5G A;  4MOY A;  3RQZ A;  4Q7F A;  2BCD A;  5J28 A;  4V0W A;  1XM7 A;  3IB8 A;  2USH A;  4UT3 A;  1II7 A;  1M63 A;  3C5W C;  4JA9 A;  4O24 A;  3KBP A;  3K7V C;  1OIE A;  4NZV A;  2WDF A;  5DNY A;  3ZU0 A;  1WAO 1;  4DT2 A;  4ORB A;  1UF3 A;  4ORC A;  3E7B A;  2AHD A;  1S3M A;  3H69 A;  4UWQ A;  3IVE A;  3GVE A;  4DSY A;  1S3N A;  1S8E A;  4IL1 A;  4FBW A;  5HPE A;  2BDX A;  3THO B;  3V4Y A;  4OR9 A;  1Z2W A;  4JA7 A;  2HY1 A;  3HVQ A;  2QFP A;  2HYP A;  4LTY A;  2HYO A;  2O8G A;  1OI8 A;  1QFC A;  3RL4 A;  3AUZ A;  4ZVZ A;  4V0X A;  2NYM C;  4XPN A;  4F0Z A;  1NNW A;  4H2G A;  2QFR A;  4B2O A;  3PSO A;  4M0V A;  3AV0 A;  1G5B A;  3QFM A;  3QFN A;  1T71 A;  4H2F A;  4H2I A;  4I5L C;  4J6O A;  3EGH A;  4MOV A;  5IOH A;  5JPF A;  5GTU A;  3H66 A;  4HD0 A;  5INB A;  2Z1A A;  4V0V A; 
#chains in the Genus database with same CATH topology
 4ORA A;  2CV9 A;  3H67 A;  4TUG A;  4FBK A;  2R17 A;  3H62 B;  2KKN A;  3DW8 C;  3FGA C;  4LU9 A;  2WDD A;  3C9F A;  2Z06 A;  1IT6 A;  3JYF A;  3K7W C;  2O8A A;  3PSN A;  1MF8 A;  1USH A;  4H2B A;  5F3W A;  1W24 A;  3DSC A;  3N5U A;  2NYL C;  1XZW A;  3D03 A;  1V73 A;  1Z2X A;  2P6B A;  4I5N C;  1HP1 A;  4KKZ A;  1WAR A;  2DXN A;  1QHW A;  3T1I A;  3E7A A;  1JK7 A;  2IE4 C;  2DFJ A;  3QG5 C;  5JPE A;  1U32 A;  4IYP C;  4O43 A;  3ICF A;  4O4K A;  4YKE A;  3THN A;  3EGG A;  4FBQ A;  3H64 A;  1S70 A;  2WDC A;  1SU1 A;  4LAC C;  2BQ8 X;  3H60 A;  1HO5 A;  3TGH A;  4UT3 B;  4ZX2 A;  1UTE A;  4MP0 A;  1OID A;  1HPU A;  4TUI A;  5JJT A;  2QJC A;  4G9J A;  2A22 A;  5EQV A;  2WDE A;  3CK2 A;  2YVT A;  3H61 A;  1T70 A;  2JOG A;  3IVD A;  4H1S A;  2IE3 C;  5B8I A;  3P71 C;  2ZOA A;  3FLO A;  3H68 A;  4FCX A;  2NXF A;  3H63 A;  5C1V A;  3ZTV A;  4KBP A;  3QFK A;  1S3L A;  3IB7 A;  2GJU A;  2Z72 A;  3LL8 A;  2XMO A;  2IAE C;  4WWL A;  3RL5 A;  1AUI A;  3DSD A;  1FJM A;  1KBP A;  2ZBM A;  4H1Y P;  2NPP C;  2Q8U A;  4UT2 A;  3RL3 A;  1TCO A;  4DHL A;  1S95 A;  3QFO A;  4O5G A;  4MOY A;  3RQZ A;  4Q7F A;  2BCD A;  5J28 A;  4V0W A;  1XM7 A;  3E0J A;  3IB8 A;  2USH A;  2ZO9 B;  4UT3 A;  1II7 A;  1M63 A;  3C5W C;  4JA9 A;  4O24 A;  3KBP A;  3K7V C;  1OIE A;  4NZV A;  2WDF A;  5DNY A;  3ZU0 A;  1WAO 1;  4DT2 A;  2DXL A;  4ORB A;  1UF3 A;  4ORC A;  3E7B A;  2AHD A;  1S3M A;  3H69 A;  4UWQ A;  3IVE A;  3GVE A;  4DSY A;  1S3N A;  1S8E A;  4IL1 A;  4FBW A;  5HPE A;  2BDX A;  3THO B;  3V4Y A;  4OR9 A;  1Z2W A;  4JA7 A;  2HY1 A;  3HVQ A;  2QFP A;  2HYP A;  4LTY A;  2HYO A;  2O8G A;  1OI8 A;  1QFC A;  3RL4 A;  3AUZ A;  4ZVZ A;  4V0X A;  2NYM C;  2YEQ A;  4XPN A;  4F0Z A;  1NNW A;  4H2G A;  2QFR A;  4B2O A;  3PSO A;  4M0V A;  3AV0 A;  1G5B A;  3QFM A;  3QFN A;  1T71 A;  4H2F A;  4H2I A;  4I5L C;  4J6O A;  3EGH A;  4MOV A;  5IOH A;  5JPF A;  5GTU A;  3H66 A;  4HD0 A;  5INB A;  2Z1A A;  4V0V A; 
#chains in the Genus database with same CATH homology
 4ORA A;  2CV9 A;  3H67 A;  4TUG A;  4FBK A;  2R17 A;  3H62 B;  2KKN A;  3DW8 C;  3FGA C;  4LU9 A;  2WDD A;  3C9F A;  2Z06 A;  1IT6 A;  3JYF A;  3K7W C;  2O8A A;  3PSN A;  1MF8 A;  1USH A;  4H2B A;  5F3W A;  1W24 A;  3DSC A;  3N5U A;  2NYL C;  1XZW A;  3D03 A;  1V73 A;  1Z2X A;  2P6B A;  4I5N C;  1HP1 A;  4KKZ A;  1WAR A;  2DXN A;  1QHW A;  3T1I A;  3E7A A;  1JK7 A;  2IE4 C;  2DFJ A;  3QG5 C;  5JPE A;  1U32 A;  4IYP C;  4O43 A;  3ICF A;  4O4K A;  4YKE A;  3THN A;  3EGG A;  4FBQ A;  3H64 A;  1S70 A;  2WDC A;  1SU1 A;  4LAC C;  2BQ8 X;  3H60 A;  1HO5 A;  3TGH A;  4UT3 B;  4ZX2 A;  1UTE A;  4MP0 A;  1OID A;  1HPU A;  4TUI A;  5JJT A;  2QJC A;  4G9J A;  2A22 A;  5EQV A;  2WDE A;  3CK2 A;  2YVT A;  3H61 A;  1T70 A;  2JOG A;  3IVD A;  4H1S A;  2IE3 C;  5B8I A;  3P71 C;  2ZOA A;  3FLO A;  3H68 A;  4FCX A;  2NXF A;  3H63 A;  5C1V A;  3ZTV A;  4KBP A;  3QFK A;  1S3L A;  3IB7 A;  2GJU A;  2Z72 A;  3LL8 A;  2XMO A;  2IAE C;  4WWL A;  3RL5 A;  1AUI A;  3DSD A;  1FJM A;  1KBP A;  2ZBM A;  4H1Y P;  2NPP C;  2Q8U A;  4UT2 A;  3RL3 A;  1TCO A;  4DHL A;  1S95 A;  3QFO A;  4O5G A;  4MOY A;  3RQZ A;  4Q7F A;  2BCD A;  5J28 A;  4V0W A;  1XM7 A;  3E0J A;  3IB8 A;  2USH A;  2ZO9 B;  4UT3 A;  1II7 A;  1M63 A;  3C5W C;  4JA9 A;  4O24 A;  3KBP A;  3K7V C;  1OIE A;  4NZV A;  2WDF A;  5DNY A;  3ZU0 A;  1WAO 1;  4DT2 A;  2DXL A;  4ORB A;  1UF3 A;  4ORC A;  3E7B A;  2AHD A;  1S3M A;  3H69 A;  4UWQ A;  3IVE A;  3GVE A;  4DSY A;  1S3N A;  1S8E A;  4IL1 A;  4FBW A;  5HPE A;  2BDX A;  3THO B;  3V4Y A;  4OR9 A;  1Z2W A;  4JA7 A;  2HY1 A;  3HVQ A;  2QFP A;  2HYP A;  4LTY A;  2HYO A;  2O8G A;  1OI8 A;  1QFC A;  3RL4 A;  3AUZ A;  4ZVZ A;  4V0X A;  2NYM C;  2YEQ A;  4XPN A;  4F0Z A;  1NNW A;  4H2G A;  2QFR A;  4B2O A;  3PSO A;  4M0V A;  3AV0 A;  1G5B A;  3QFM A;  3QFN A;  1T71 A;  4H2F A;  4H2I A;  4I5L C;  4J6O A;  3EGH A;  4MOV A;  5IOH A;  5JPF A;  5GTU A;  3H66 A;  4HD0 A;  5INB A;  2Z1A A;  4V0V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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