2KMRA

Solution structure of intermediate iic of leech-derived tryptase inhibitor, ldti.
Total Genus 4
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
44
structure length
44
Chain Sequence
KKVCACPKILKPVCGSDGRTYANSCIARCNGVSIKSEGSCPTGI
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Leech-derived tryptase inhibitor C
publication title Deciphering the structural basis that guides the oxidative folding of leech-derived tryptase inhibitor.
pubmed doi rcsb
source organism Hirudo medicinalis
total genus 4
structure length 44
sequence length 44
ec nomenclature
pdb deposition date 2009-08-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00050 Kazal_1 Kazal-type serine protease inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.30 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2kmrA01
2F3CI 1M8CA 1M8BA 1CT0I 1R0RI 1Y1BA 5JHWC 2LEOA 4HGUA 3SEKC 1DS3I 2JYYA 2KMQA 2SGPI 3OVOA 1BUSA 2NU1I 1SGPI 1OMTA 2M5XA 2NU4I 1FYBA 2GKVA 3HH2C 1TGSI 2XRCA 1TBQR 1HPTA 2GKTI 4GI3C 2JXDA 1MT1A 1OVOA 2KCXA 1HDLA 1IY5A 1UVFA 1LR9A 1TUSA 1YU6C 3QTLD 4SGBI 1SGDI 1CT2I 1PPFI 2KMOA 1HJAI 2B0UC 1IW4A 2BUSA 1CHOI 2JZMA 2WCYA 1YTPA 1OMUA 1LR8A 2GKRI 1H0ZA 1SGYI 1PCEA 2P6AC 1Y1CA 2V53A 1NUBA 2NU0I 3B4VC 1LR7A 1AN1I 1DS2I 1CT4I 1SGRI 2ARPF 1CE3A 2NU3I 2SGDI 2NU2I 2OVOA 2SGFI 3SGBI 1TBRR 1CGJI 1SGQI 1SGEI 2N52A 1UVGA 1CGII 1PJUA 1IY6A 2QQDA 1KMAA 2SGEI 1UUCA 2N71A 1Z7KB 2KMPA 4OVOA 1TURA 2ERWA 1N13A 3TJQA 1TIHA 3SGQI 1OYVI 5DAEA 1CSOI 1SGNI 2SGQI 2N17A 2KMRA 2QQCA 1BMOA
chains in the Genus database with same CATH superfamily
2FNFX 2ELIA 2F3CI 1HEVA 1M8CA 1M8BA 3VE5A 1CT0I 1R0RI 1W3SA 2ENZA 3TOBA 4FKDA 1Y1BA 4AMLA 5JHWC 2LEOA 4HGUA 3SEKC 1DS3I 2JYYA 1FAQA 3R5DA 3TO6A 3FSYA 5J8FA 4MPIA 4B6DA 2KMQA 3OXGA 2A20A 2SGPI 2RC4A 1ULMA 2UZ3A 3OVOA 3BJIA 1BUSA 2NU1I 5EX0A 2PQ8A 1SGPI 3R5CA 1OMTA 1ULNA 2YUUA 7WGAA 2M5XA 2UVOA 5EX3A 5CCLA 5E3PA 3E59A 2NU4I 1FYBA 1Q9BA 2GKVA 2QQCA 2X3TA 1TBOA 2ODDA 1TGSI 1TBNA 3HH2C 3UGDA 2K9HA 2RIJA 4UXIA 1UHAA 2XRCA 1K7UA 2LUYA 1TBQR 1HPTA 2ORVA 2GKTI 3OL0A 5CCMA 4GI3C 2JXDA 1U5KA 2ENNA 1MT1A 1OVOA 2KCXA 3CXLA 1HDLA 5FUYA 1IY5A 3R5BA 3QWPA 5FUVA 2GIVA 1UVFA 2QQ0A 2ORWA 3QAHA 1Z2IA 2KMRA 5E3RA 4A24A 1LR9A 1TUSA 2QQEA 4E1PA 1YU6C 3QTLD 1P9ZA 1V1IA 2CJSC 4SGBI 3RU0A 4E1RA 1SGDI 3TO9A 1CT2I 1PPFI 3PDNA 3UFFA 1K7TA 2KMOA 1HJAI 1NXUA 2B0UC 1P9GA 2JW6A 3FSXA 1KBFA 1PTRA 2DIPA 1IW4A 2VRWB 2OU2A 2WGCA 2BUSA 4UXHA 1CHOI 1WKXA 2ROWA 2JZMA 2WCYA 1WTJA 2YQPA 2JA1A 1YTPA 5E3QA 1OMUA 3R5AA 1LR8A 3UOEA 2GKRI 1H0ZA 2L7XA 1SGYI 2B8TA 2CWFA 2WVJA 1PCEA 2P6AC 1Y1CA 4UXJA 2V53A 1NUBA 1WGCA 3KY9A 2V1CC 1R79A 2LB7A 2NU0I 3UEJA 3B4VC 1LR7A 2J9RA 1Y8FA 1AN1I 1DS2I 1MJ9A 1CT4I 2E5RA 2N1AB 2CWHA 3GOXA 1SGRI 1MJBA 2ARPF 1X74A 1CE3A 2NU3I 2SGDI 3FC3A 1XA6A 2NU2I 2OVOA 2SGFI 3D00A 2OZUA 1TBRR 1W4RA 1X4SA 2QPOA 3E2IA 1CGJI 2V1CA 3OXLA 3OXFA 1SGQI 1WGTA 1SGEI 2CWGA 2L8EA 1KBEA 1ULKA 2N52A 1FARA 1UVGA 1V1HA 1CGII 1K7VA 4WP4A 2OD1A 4DNCA 1PJUA 1IY6A 2W0TA 5J8CA 3TOAA 5FUWA 1S20A 2X52A 2QQDA 2Y0MA 1KMAA 2DB6A 1MJAA 1UUCA 2N71A 1TOTA 2SGEI 4JCVE 1Z7KB 9WGAA 3TO7A 1XBTA 3VDUA 3SGBI 2KMPA 4OVOA 1XX6A 3UEYA 5FUXA 1TURA 3UGLA 4L9MA 2ERWA 3UGIA 1PTQA 1N13A 3TJQA 1TIHA 1FY7A 1RFHA 3SGQI 1OYVI 3VDPA 5DAEA 5HI7A 1CSOI 1SGNI 2DKVA 2GVIA 2J87A 2SGQI 2N17A 3MEKA 1VDDA 5HQ8A 2E73A 1BMOA
chains in the Genus database with same CATH topology
2FNFX 2ELIA 2F3CI 1M8CA 1M8BA 3VE5A 1CT0I 1R0RI 1W3SA 2ENZA 4FKDA 1Y1BA 5JHWC 2LEOA 4HGUA 3SEKC 1DS3I 2JYYA 1FAQA 4B6DA 2KMQA 3OXGA 2A20A 2SGPI 2UZ3A 3OVOA 3BJIA 1BUSA 2NU1I 5EX0A 1SGPI 1OMTA 2YUUA 5CCLA 2M5XA 5EX3A 3E59A 2NU4I 1FYBA 2GKVA 2QQCA 1TBOA 2ODDA 1TGSI 1TBNA 3HH2C 3UGDA 2K9HA 4UXIA 2XRCA 2LUYA 1TBQR 1HPTA 2ORVA 2GKTI 3OL0A 5CCMA 4GI3C 2JXDA 1U5KA 2ENNA 1MT1A 1OVOA 2KCXA 3CXLA 1HDLA 5FUYA 1IY5A 3QWPA 5FUVA 2QQ0A 1UVFA 2ORWA 2KMRA 4A24A 1LR9A 1TUSA 2QQEA 1YU6C 3QTLD 2CJSC 1V1IA 4SGBI 3RU0A 4E1RA 1SGDI 1CT2I 1PPFI 3PDNA 3UFFA 2KMOA 1HJAI 2B0UC 2JW6A 1KBFA 1PTRA 2DIPA 1IW4A 2VRWB 2BUSA 4UXHA 1CHOI 2ROWA 2JZMA 2WCYA 2JA1A 1YTPA 1OMUA 1LR8A 2GKRI 1H0ZA 2L7XA 1SGYI 2B8TA 2WVJA 1PCEA 2P6AC 1Y1CA 2V53A 1NUBA 3KY9A 2V1CC 1R79A 2NU0I 3UEJA 3B4VC 1LR7A 2J9RA 1Y8FA 1AN1I 1DS2I 2E5RA 1CT4I 2N1AB 4E1PA 3GOXA 1SGRI 2ARPF 1CE3A 1X74A 2NU3I 2SGDI 3FC3A 1XA6A 2NU2I 2OVOA 2SGFI 3D00A 2QPOA 1TBRR 1W4RA 1X4SA 3E2IA 3OXLA 1CGJI 2V1CA 3OXFA 4UXJA 1SGQI 1SGEI 2L8EA 1KBEA 2N52A 1FARA 1UVGA 1V1HA 1CGII 2OD1A 1PJUA 1IY6A 2W0TA 5FUWA 2QQDA 1KMAA 2DB6A 2SGEI 1UUCA 2N71A 1TOTA 4JCVE 1Z7KB 3VDUA 1XBTA 3SGBI 2KMPA 4OVOA 1XX6A 3UEYA 5FUXA 1TURA 3UGLA 4L9MA 2ERWA 3UGIA 1PTQA 1N13A 3TJQA 1TIHA 1RFHA 3SGQI 1OYVI 3VDPA 5DAEA 5HI7A 1CSOI 1SGNI 2GVIA 2J87A 2SGQI 2YQPA 2N17A 3MEKA 1VDDA 5HQ8A 2E73A 1BMOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F3C I;  1M8C A;  1M8B A;  1CT0 I;  1R0R I;  1Y1B A;  5JHW C;  2LEO A;  4HGU A;  3SEK C;  1DS3 I;  2JYY A;  2KMQ A;  2SGP I;  3OVO A;  1BUS A;  2NU1 I;  1SGP I;  1OMT A;  2M5X A;  2NU4 I;  1FYB A;  2GKV A;  3HH2 C;  1TGS I;  2XRC A;  1TBQ R;  1HPT A;  2GKT I;  4GI3 C;  2JXD A;  1MT1 A;  1OVO A;  2KCX A;  1HDL A;  1IY5 A;  1UVF A;  1LR9 A;  1TUS A;  1YU6 C;  3QTL D;  4SGB I;  1SGD I;  1CT2 I;  1PPF I;  2KMO A;  1HJA I;  2B0U C;  1IW4 A;  2BUS A;  1CHO I;  2JZM A;  2WCY A;  1YTP A;  1OMU A;  1LR8 A;  2GKR I;  1H0Z A;  1SGY I;  1PCE A;  2P6A C;  1Y1C A;  2V53 A;  1NUB A;  2NU0 I;  3B4V C;  1LR7 A;  1AN1 I;  1DS2 I;  1CT4 I;  1SGR I;  2ARP F;  1CE3 A;  2NU3 I;  2SGD I;  2NU2 I;  2OVO A;  2SGF I;  3SGB I;  1TBR R;  1CGJ I;  1SGQ I;  1SGE I;  2N52 A;  1UVG A;  1CGI I;  1PJU A;  1IY6 A;  2QQD A;  1KMA A;  2SGE I;  1UUC A;  2N71 A;  1Z7K B;  2KMP A;  4OVO A;  1TUR A;  2ERW A;  1N13 A;  3TJQ A;  1TIH A;  3SGQ I;  1OYV I;  5DAE A;  1CSO I;  1SGN I;  2SGQ I;  2N17 A;  2KMR A;  2QQC A;  1BMO A; 
#chains in the Genus database with same CATH topology
 2FNF X;  2ELI A;  2F3C I;  1HEV A;  1M8C A;  1M8B A;  3VE5 A;  1CT0 I;  1R0R I;  1W3S A;  2ENZ A;  3TOB A;  4FKD A;  1Y1B A;  4AML A;  5JHW C;  2LEO A;  4HGU A;  3SEK C;  1DS3 I;  2JYY A;  1FAQ A;  3R5D A;  3TO6 A;  3FSY A;  5J8F A;  4MPI A;  4B6D A;  2KMQ A;  3OXG A;  2A20 A;  2SGP I;  2RC4 A;  1ULM A;  2UZ3 A;  3OVO A;  3BJI A;  1BUS A;  2NU1 I;  5EX0 A;  2PQ8 A;  1SGP I;  3R5C A;  1OMT A;  1ULN A;  2YUU A;  7WGA A;  2M5X A;  2UVO A;  5EX3 A;  5CCL A;  5E3P A;  3E59 A;  2NU4 I;  1FYB A;  1Q9B A;  2GKV A;  2QQC A;  2X3T A;  1TBO A;  2ODD A;  1TGS I;  1TBN A;  3HH2 C;  3UGD A;  2K9H A;  2RIJ A;  4UXI A;  1UHA A;  2XRC A;  1K7U A;  2LUY A;  1TBQ R;  1HPT A;  2ORV A;  2GKT I;  3OL0 A;  5CCM A;  4GI3 C;  2JXD A;  1U5K A;  2ENN A;  1MT1 A;  1OVO A;  2KCX A;  3CXL A;  1HDL A;  5FUY A;  1IY5 A;  3R5B A;  3QWP A;  5FUV A;  2GIV A;  1UVF A;  2QQ0 A;  2ORW A;  3QAH A;  1Z2I A;  2KMR A;  5E3R A;  4A24 A;  1LR9 A;  1TUS A;  2QQE A;  4E1P A;  1YU6 C;  3QTL D;  1P9Z A;  1V1I A;  2CJS C;  4SGB I;  3RU0 A;  4E1R A;  1SGD I;  3TO9 A;  1CT2 I;  1PPF I;  3PDN A;  3UFF A;  1K7T A;  2KMO A;  1HJA I;  1NXU A;  2B0U C;  1P9G A;  2JW6 A;  3FSX A;  1KBF A;  1PTR A;  2DIP A;  1IW4 A;  2VRW B;  2OU2 A;  2WGC A;  2BUS A;  4UXH A;  1CHO I;  1WKX A;  2ROW A;  2JZM A;  2WCY A;  1WTJ A;  2YQP A;  2JA1 A;  1YTP A;  5E3Q A;  1OMU A;  3R5A A;  1LR8 A;  3UOE A;  2GKR I;  1H0Z A;  2L7X A;  1SGY I;  2B8T A;  2CWF A;  2WVJ A;  1PCE A;  2P6A C;  1Y1C A;  4UXJ A;  2V53 A;  1NUB A;  1WGC A;  3KY9 A;  2V1C C;  1R79 A;  2LB7 A;  2NU0 I;  3UEJ A;  3B4V C;  1LR7 A;  2J9R A;  1Y8F A;  1AN1 I;  1DS2 I;  1MJ9 A;  1CT4 I;  2E5R A;  2N1A B;  2CWH A;  3GOX A;  1SGR I;  1MJB A;  2ARP F;  1X74 A;  1CE3 A;  2NU3 I;  2SGD I;  3FC3 A;  1XA6 A;  2NU2 I;  2OVO A;  2SGF I;  3D00 A;  2OZU A;  1TBR R;  1W4R A;  1X4S A;  2QPO A;  3E2I A;  1CGJ I;  2V1C A;  3OXL A;  3OXF A;  1SGQ I;  1WGT A;  1SGE I;  2CWG A;  2L8E A;  1KBE A;  1ULK A;  2N52 A;  1FAR A;  1UVG A;  1V1H A;  1CGI I;  1K7V A;  4WP4 A;  2OD1 A;  4DNC A;  1PJU A;  1IY6 A;  2W0T A;  5J8C A;  3TOA A;  5FUW A;  1S20 A;  2X52 A;  2QQD A;  2Y0M A;  1KMA A;  2DB6 A;  1MJA A;  1UUC A;  2N71 A;  1TOT A;  2SGE I;  4JCV E;  1Z7K B;  9WGA A;  3TO7 A;  1XBT A;  3VDU A;  3SGB I;  2KMP A;  4OVO A;  1XX6 A;  3UEY A;  5FUX A;  1TUR A;  3UGL A;  4L9M A;  2ERW A;  3UGI A;  1PTQ A;  1N13 A;  3TJQ A;  1TIH A;  1FY7 A;  1RFH A;  3SGQ I;  1OYV I;  3VDP A;  5DAE A;  5HI7 A;  1CSO I;  1SGN I;  2DKV A;  2GVI A;  2J87 A;  2SGQ I;  2N17 A;  3MEK A;  1VDD A;  5HQ8 A;  2E73 A;  1BMO A; 
#chains in the Genus database with same CATH homology
 2FNF X;  2ELI A;  2F3C I;  1M8C A;  1M8B A;  3VE5 A;  1CT0 I;  1R0R I;  1W3S A;  2ENZ A;  4FKD A;  1Y1B A;  5JHW C;  2LEO A;  4HGU A;  3SEK C;  1DS3 I;  2JYY A;  1FAQ A;  4B6D A;  2KMQ A;  3OXG A;  2A20 A;  2SGP I;  2UZ3 A;  3OVO A;  3BJI A;  1BUS A;  2NU1 I;  5EX0 A;  1SGP I;  1OMT A;  2YUU A;  5CCL A;  2M5X A;  5EX3 A;  3E59 A;  2NU4 I;  1FYB A;  2GKV A;  2QQC A;  1TBO A;  2ODD A;  1TGS I;  1TBN A;  3HH2 C;  3UGD A;  2K9H A;  4UXI A;  2XRC A;  2LUY A;  1TBQ R;  1HPT A;  2ORV A;  2GKT I;  3OL0 A;  5CCM A;  4GI3 C;  2JXD A;  1U5K A;  2ENN A;  1MT1 A;  1OVO A;  2KCX A;  3CXL A;  1HDL A;  5FUY A;  1IY5 A;  3QWP A;  5FUV A;  2QQ0 A;  1UVF A;  2ORW A;  2KMR A;  4A24 A;  1LR9 A;  1TUS A;  2QQE A;  1YU6 C;  3QTL D;  2CJS C;  1V1I A;  4SGB I;  3RU0 A;  4E1R A;  1SGD I;  1CT2 I;  1PPF I;  3PDN A;  3UFF A;  2KMO A;  1HJA I;  2B0U C;  2JW6 A;  1KBF A;  1PTR A;  2DIP A;  1IW4 A;  2VRW B;  2BUS A;  4UXH A;  1CHO I;  2ROW A;  2JZM A;  2WCY A;  2JA1 A;  1YTP A;  1OMU A;  1LR8 A;  2GKR I;  1H0Z A;  2L7X A;  1SGY I;  2B8T A;  2WVJ A;  1PCE A;  2P6A C;  1Y1C A;  2V53 A;  1NUB A;  3KY9 A;  2V1C C;  1R79 A;  2NU0 I;  3UEJ A;  3B4V C;  1LR7 A;  2J9R A;  1Y8F A;  1AN1 I;  1DS2 I;  2E5R A;  1CT4 I;  2N1A B;  4E1P A;  3GOX A;  1SGR I;  2ARP F;  1CE3 A;  1X74 A;  2NU3 I;  2SGD I;  3FC3 A;  1XA6 A;  2NU2 I;  2OVO A;  2SGF I;  3D00 A;  2QPO A;  1TBR R;  1W4R A;  1X4S A;  3E2I A;  3OXL A;  1CGJ I;  2V1C A;  3OXF A;  4UXJ A;  1SGQ I;  1SGE I;  2L8E A;  1KBE A;  2N52 A;  1FAR A;  1UVG A;  1V1H A;  1CGI I;  2OD1 A;  1PJU A;  1IY6 A;  2W0T A;  5FUW A;  2QQD A;  1KMA A;  2DB6 A;  2SGE I;  1UUC A;  2N71 A;  1TOT A;  4JCV E;  1Z7K B;  3VDU A;  1XBT A;  3SGB I;  2KMP A;  4OVO A;  1XX6 A;  3UEY A;  5FUX A;  1TUR A;  3UGL A;  4L9M A;  2ERW A;  3UGI A;  1PTQ A;  1N13 A;  3TJQ A;  1TIH A;  1RFH A;  3SGQ I;  1OYV I;  3VDP A;  5DAE A;  5HI7 A;  1CSO I;  1SGN I;  2GVI A;  2J87 A;  2SGQ I;  2YQP A;  2N17 A;  3MEK A;  1VDD A;  5HQ8 A;  2E73 A;  1BMO A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...