2KOQA

Nmr solution structures of 3-hydroxyoctanoyl-acp from streptomyces coelicolor fatty acid synthase
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
81
structure length
81
Chain Sequence
AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
source organism Streptomyces coelicolor
publication title Recognition of intermediate functionality by acyl carrier protein over a complete cycle of fatty acid biosynthesis
pubmed doi rcsb
molecule keywords Acyl carrier protein
total genus 24
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2009-09-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2koqA00
2FACA 2KG6A 2LTEA 2VSQA 2KGAA 1KLPA 2L0QA 3EJEA 1HY8A 2AFEA 2FHSC 2KORA 2KOQA 2ROQA 2KGDA 2FAEA 2LL8A 2GDXA 1DV5A 4HKGA 2FADA 1DNYA 2FQ2A 2FVAA 4BPGA 5KP8B 5KP6B 2KW2A 3GZLA 1NQ4A 2KG9A 2XZ1C 2JU2A 2N98A 2N5HA 1ACPA 2AF8A 2FVFA 4H2YC 2MF4A 2JGPA 2LPKA 3RG2A 3EJBA 2JU1A 2EHSA 2KWLA 2DNWA 4MRTC 2LMLA 2AVAA 4DG9A 1HQBA 3LMOA 2XZ0D 2K0YA 2QNWA 3GZMA 2CQ8A 1F80D 2FQ0A 2M5RA 3CE7A 2FQ1A 4H2WC 4IZ6A 1X3OA 2LIUA 2MVUA 2GDWA 2KGEA 2FVEA 2KG8A 4NEOA 3NY7B 2N6ZA 2KR5A 4BPHA 2MVVA 4R0MA 2CG5B 2MY5A 2K94A 2N6YA 2CGQA 2LKIA 4PWVB 2K0XA 2MD9A 2L9FA 2CNRA 2KOPA 2PNGA 4PXHB 5CZDB 5HVCA 1VKUA 2JQ4A 2LIWA 2KOOA 1AF8A 2MR7A 1T8KA 2KOSA 2N50A 5EJDA 2MR8A 2X2BA 1L0HA 1OR5A 2K93A 2AFDA 1L0IA 3EJDA 2N5IA 4BPFA 2EHTA 2LOLA 2K92A 4CA3A 2L22A 5HV8A 4H2XC 5KP7B 2K2QA 2GDYA 2L4BA 2KGCA
chains in the Genus database with same CATH superfamily
1KQSO 1VQ9P 1K73Q 1S72P 2AFEA 2FHSC 1EOQA 2FAEA 2LL8A 1DV5A 1DNYA 1M74A 3E2DA 4BPGA 1W2BO 4XFXA 1NQ4A 2KG9A 1JJ2O 4PH0A 3CD6P 2EIAA 1ACPA 1BXIA 2AF8A 4XFYA 1YJ9P 1NJIQ 1FR2A 5F2OA 1Q86Q 5BS2A 1E6JP 2WPTA 1ZNVA 1M1KQ 4QKOA 3LMOA 1KD1Q 1RO2A 2Z44A 3CCVP 1F80D 1QRJA 2FQ0A 1VQNP 3CXCO 3CCSP 3B4QA 2XT1A 3B5IA 1VQ8P 4U0AA 3G1GA 3CCUP 2FVEA 1IUQA 1VQOP 1Q82Q 1A43A 1YHQP 1VQ5P 4BPHA 2Z46A 1VQPP 2XXMA 3G28A 2CG5B 1KC8Q 3H0DA 2OTLP 5CZDB 1VKUA 5EW5E 2MR7A 1CEIA 5DCKA 4U0BA 3CPWO 1L0HA 1OR5A 1L0IA 1UJZA 2N5IA 2EHTA 1AYIA 2K92A 2L22A 4H2XC 2GDYA 2FACA 3VRLC 2KG6A 1YITP 3DS3A 1A8OA 5HGLA 2GZIA 1VQLP 3I55P 3EJEA 2KORA 4IPYA 1GXHA 1RNIA 4WYMA 2FADA 2FQ2A 2NO8A 5KP8B 4UHPB 2XZ1C 2GYKA 2KODA 1YI2P 2N5HA 2JBGA 5I4TG 2FVFA 4H2YC 3CC7P 2VLQA 2JGPA 1VHNA 1N8RQ 3CCMP 3EJBA 3M1MA 3Q20A 1EIAA 4COCA 5JPAA 2VLOA 5HGOA 3DPHA 3HYBA 4F37A 2GZEA 2VLPA 4H2WC 2ONTA 3G71P 2PEOA 3DS4A 1M90Q 2KR5A 4GR2A 2MY5A 4PWVB 4U0DA 5F2KA 1IMQA 4PXHB 5HVCA 2GZGA 2JQ4A 2KOOA 1AF8A 2DGYA 5EJDA 2X2BA 2GZFA 2K93A 2XV6A 3WBHA 4BPFA 1VQ7P 1EMVA 1QVFO 2K2QA 2QEXP 2KGCA 1GPJA 4XRQA 1YJNP 2VSQA 3RG6C 2KGAA 3H4EA 1KLPA 1ZMBA 2JAZA 2KOQA 1E0HA 2PEKA 3CCEP 1QVGO 5HGMA 3LRYA 2EFJA 2KW2A 3GZLA 3MGEA 1MZ8A 3DTJA 1M6EX 2JYGA 2QA4P 3G29A 3NTEA 3G21A 2OARA 3RG2A 3U43A 1GXGA 1VQ6P 2E1MA 3G4SP 1Q7YQ 2KWLA 1M6NA 2PEMA 2AVAA 2PEQA 3CC4P 2K0DX 4DG9A 2LF4A 1RO0A 2K0YA 1IMPA 2QNWA 2FQ1A 4IZ6A 2MVUA 3GJNA 4XFZA 1YJWP 3P05A 2KGEA 3H47A 7CEIA 2OTJP 1BAJA 5BS1A 3G0VA 3DS0A 4R0MA 1K9MQ 2M8PA 2K94A 5HGNA 2CGQA 4U0EA 2K0XA 2L9FA 2CNRA 4PH1A 2Z45A 3OW2O 1T8KA 3CC2P 2PENA 2MR8A 2L6EA 3DS1A 2M8LA 4CA3A 5KP7B 2LPKA 2LTEA 4COPA 2L0QA 1HY8A 1VQKP 2ROQA 2KGDA 2GDXA 3GKLC 4HKGA 2FVAA 3CMAP 2VLNA 3CCJP 1D1DA 2PEJA 1K30A 3G6EP 3CCQP 3CCRP 5KP6B 2GZJA 1VQ4P 2JU2A 2N98A 2PEIA 2CWOA 3CMEP 1UNKA 2K5XA 2MF4A 1Z6MA 5F2NA 2JU1A 2EHSA 4M0IA 2DNWA 4MRTC 2LMLA 3G26A 3CCLP 1HQBA 2XZ0D 4XROA 3GZMA 2CQ8A 2M5RA 3CE7A 3HZQA 1X3OA 2LIUA 4GR6A 2GDWA 4U0CA 3G1IA 1K8AQ 3DS5A 4QNBA 3DS2A 2JYLA 2JO0A 2KG8A 1YIJP 4NEOA 3NY7B 2N6ZA 2MVVA 2JB0A 2N6YA 2LKIA 1AUMA 2MD9A 2KOPA 2PNGA 2P9XA 2PY8A 2LIWA 2ERHA 2BUOA 1VQMP 2KOSA 2N50A 4U0FA 2AFDA 3EJDA 3I56P 2M8NA 1Q81Q 2LOLA 5HV8A 2EG5A 2BHVA 2L4BA
chains in the Genus database with same CATH topology
2FACA 2KG6A 2LTEA 2VSQA 2KGAA 1KLPA 2L0QA 3EJEA 1HY8A 2AFEA 2FHSC 2KORA 2KOQA 2ROQA 2KGDA 2FAEA 2LL8A 2GDXA 1DV5A 4HKGA 2FADA 1DNYA 2FQ2A 2FVAA 4BPGA 5KP8B 5KP6B 2KW2A 3GZLA 1NQ4A 2KG9A 2XZ1C 2JU2A 2N98A 2N5HA 1ACPA 2AF8A 2FVFA 4H2YC 2MF4A 2JGPA 2LPKA 3RG2A 3EJBA 2JU1A 2EHSA 2KWLA 2DNWA 4MRTC 2LMLA 2AVAA 4DG9A 1HQBA 3LMOA 2XZ0D 2K0YA 2QNWA 3GZMA 2CQ8A 1F80D 2FQ0A 2M5RA 3CE7A 2FQ1A 4H2WC 4IZ6A 1X3OA 2LIUA 2MVUA 2GDWA 2KGEA 2FVEA 2KG8A 4NEOA 3NY7B 2N6ZA 2KR5A 4BPHA 2MVVA 4R0MA 2CG5B 2MY5A 2K94A 2N6YA 2CGQA 2LKIA 4PWVB 2K0XA 2MD9A 2L9FA 2CNRA 2KOPA 2PNGA 4PXHB 5CZDB 5HVCA 1VKUA 2JQ4A 2LIWA 2KOOA 1AF8A 2MR7A 1T8KA 2KOSA 2N50A 5EJDA 2MR8A 2X2BA 1L0HA 1OR5A 2K93A 2AFDA 1L0IA 3EJDA 2N5IA 4BPFA 2EHTA 2LOLA 2K92A 4CA3A 2L22A 5HV8A 4H2XC 5KP7B 2K2QA 2GDYA 2L4BA 2KGCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2FAC A;  2KG6 A;  2LTE A;  2VSQ A;  2KGA A;  1KLP A;  2L0Q A;  3EJE A;  1HY8 A;  2AFE A;  2FHS C;  2KOR A;  2KOQ A;  2ROQ A;  2KGD A;  2FAE A;  2LL8 A;  2GDX A;  1DV5 A;  4HKG A;  2FAD A;  1DNY A;  2FQ2 A;  2FVA A;  4BPG A;  5KP8 B;  5KP6 B;  2KW2 A;  3GZL A;  1NQ4 A;  2KG9 A;  2XZ1 C;  2JU2 A;  2N98 A;  2N5H A;  1ACP A;  2AF8 A;  2FVF A;  4H2Y C;  2MF4 A;  2JGP A;  2LPK A;  3RG2 A;  3EJB A;  2JU1 A;  2EHS A;  2KWL A;  2DNW A;  4MRT C;  2LML A;  2AVA A;  4DG9 A;  1HQB A;  3LMO A;  2XZ0 D;  2K0Y A;  2QNW A;  3GZM A;  2CQ8 A;  1F80 D;  2FQ0 A;  2M5R A;  3CE7 A;  2FQ1 A;  4H2W C;  4IZ6 A;  1X3O A;  2LIU A;  2MVU A;  2GDW A;  2KGE A;  2FVE A;  2KG8 A;  4NEO A;  3NY7 B;  2N6Z A;  2KR5 A;  4BPH A;  2MVV A;  4R0M A;  2CG5 B;  2MY5 A;  2K94 A;  2N6Y A;  2CGQ A;  2LKI A;  4PWV B;  2K0X A;  2MD9 A;  2L9F A;  2CNR A;  2KOP A;  2PNG A;  4PXH B;  5CZD B;  5HVC A;  1VKU A;  2JQ4 A;  2LIW A;  2KOO A;  1AF8 A;  2MR7 A;  1T8K A;  2KOS A;  2N50 A;  5EJD A;  2MR8 A;  2X2B A;  1L0H A;  1OR5 A;  2K93 A;  2AFD A;  1L0I A;  3EJD A;  2N5I A;  4BPF A;  2EHT A;  2LOL A;  2K92 A;  4CA3 A;  2L22 A;  5HV8 A;  4H2X C;  5KP7 B;  2K2Q A;  2GDY A;  2L4B A;  2KGC A; 
#chains in the Genus database with same CATH topology
 1KQS O;  1VQ9 P;  1K73 Q;  1S72 P;  2AFE A;  2FHS C;  1EOQ A;  2FAE A;  2LL8 A;  1DV5 A;  1DNY A;  1M74 A;  3E2D A;  4BPG A;  1W2B O;  4XFX A;  1NQ4 A;  2KG9 A;  1JJ2 O;  4PH0 A;  3CD6 P;  2EIA A;  1ACP A;  1BXI A;  2AF8 A;  4XFY A;  1YJ9 P;  1NJI Q;  1FR2 A;  5F2O A;  1Q86 Q;  5BS2 A;  1E6J P;  2WPT A;  1ZNV A;  1M1K Q;  4QKO A;  3LMO A;  1KD1 Q;  1RO2 A;  2Z44 A;  3CCV P;  1F80 D;  1QRJ A;  2FQ0 A;  1VQN P;  3CXC O;  3CCS P;  3B4Q A;  2XT1 A;  3B5I A;  1VQ8 P;  4U0A A;  3G1G A;  3CCU P;  2FVE A;  1IUQ A;  1VQO P;  1Q82 Q;  1A43 A;  1YHQ P;  1VQ5 P;  4BPH A;  2Z46 A;  1VQP P;  2XXM A;  3G28 A;  2CG5 B;  1KC8 Q;  3H0D A;  2OTL P;  5CZD B;  1VKU A;  5EW5 E;  2MR7 A;  1CEI A;  5DCK A;  4U0B A;  3CPW O;  1L0H A;  1OR5 A;  1L0I A;  1UJZ A;  2N5I A;  2EHT A;  1AYI A;  2K92 A;  2L22 A;  4H2X C;  2GDY A;  2FAC A;  3VRL C;  2KG6 A;  1YIT P;  3DS3 A;  1A8O A;  5HGL A;  2GZI A;  1VQL P;  3I55 P;  3EJE A;  2KOR A;  4IPY A;  1GXH A;  1RNI A;  4WYM A;  2FAD A;  2FQ2 A;  2NO8 A;  5KP8 B;  4UHP B;  2XZ1 C;  2GYK A;  2KOD A;  1YI2 P;  2N5H A;  2JBG A;  5I4T G;  2FVF A;  4H2Y C;  3CC7 P;  2VLQ A;  2JGP A;  1VHN A;  1N8R Q;  3CCM P;  3EJB A;  3M1M A;  3Q20 A;  1EIA A;  4COC A;  5JPA A;  2VLO A;  5HGO A;  3DPH A;  3HYB A;  4F37 A;  2GZE A;  2VLP A;  4H2W C;  2ONT A;  3G71 P;  2PEO A;  3DS4 A;  1M90 Q;  2KR5 A;  4GR2 A;  2MY5 A;  4PWV B;  4U0D A;  5F2K A;  1IMQ A;  4PXH B;  5HVC A;  2GZG A;  2JQ4 A;  2KOO A;  1AF8 A;  2DGY A;  5EJD A;  2X2B A;  2GZF A;  2K93 A;  2XV6 A;  3WBH A;  4BPF A;  1VQ7 P;  1EMV A;  1QVF O;  2K2Q A;  2QEX P;  2KGC A;  1GPJ A;  4XRQ A;  1YJN P;  2VSQ A;  3RG6 C;  2KGA A;  3H4E A;  1KLP A;  1ZMB A;  2JAZ A;  2KOQ A;  1E0H A;  2PEK A;  3CCE P;  1QVG O;  5HGM A;  3LRY A;  2EFJ A;  2KW2 A;  3GZL A;  3MGE A;  1MZ8 A;  3DTJ A;  1M6E X;  2JYG A;  2QA4 P;  3G29 A;  3NTE A;  3G21 A;  2OAR A;  3RG2 A;  3U43 A;  1GXG A;  1VQ6 P;  2E1M A;  3G4S P;  1Q7Y Q;  2KWL A;  1M6N A;  2PEM A;  2AVA A;  2PEQ A;  3CC4 P;  2K0D X;  4DG9 A;  2LF4 A;  1RO0 A;  2K0Y A;  1IMP A;  2QNW A;  2FQ1 A;  4IZ6 A;  2MVU A;  3GJN A;  4XFZ A;  1YJW P;  3P05 A;  2KGE A;  3H47 A;  7CEI A;  2OTJ P;  1BAJ A;  5BS1 A;  3G0V A;  3DS0 A;  4R0M A;  1K9M Q;  2M8P A;  2K94 A;  5HGN A;  2CGQ A;  4U0E A;  2K0X A;  2L9F A;  2CNR A;  4PH1 A;  2Z45 A;  3OW2 O;  1T8K A;  3CC2 P;  2PEN A;  2MR8 A;  2L6E A;  3DS1 A;  2M8L A;  4CA3 A;  5KP7 B;  2LPK A;  2LTE A;  4COP A;  2L0Q A;  1HY8 A;  1VQK P;  2ROQ A;  2KGD A;  2GDX A;  3GKL C;  4HKG A;  2FVA A;  3CMA P;  2VLN A;  3CCJ P;  1D1D A;  2PEJ A;  1K30 A;  3G6E P;  3CCQ P;  3CCR P;  5KP6 B;  2GZJ A;  1VQ4 P;  2JU2 A;  2N98 A;  2PEI A;  2CWO A;  3CME P;  1UNK A;  2K5X A;  2MF4 A;  1Z6M A;  5F2N A;  2JU1 A;  2EHS A;  4M0I A;  2DNW A;  4MRT C;  2LML A;  3G26 A;  3CCL P;  1HQB A;  2XZ0 D;  4XRO A;  3GZM A;  2CQ8 A;  2M5R A;  3CE7 A;  3HZQ A;  1X3O A;  2LIU A;  4GR6 A;  2GDW A;  4U0C A;  3G1I A;  1K8A Q;  3DS5 A;  4QNB A;  3DS2 A;  2JYL A;  2JO0 A;  2KG8 A;  1YIJ P;  4NEO A;  3NY7 B;  2N6Z A;  2MVV A;  2JB0 A;  2N6Y A;  2LKI A;  1AUM A;  2MD9 A;  2KOP A;  2PNG A;  2P9X A;  2PY8 A;  2LIW A;  2ERH A;  2BUO A;  1VQM P;  2KOS A;  2N50 A;  4U0F A;  2AFD A;  3EJD A;  3I56 P;  2M8N A;  1Q81 Q;  2LOL A;  5HV8 A;  2EG5 A;  2BHV A;  2L4B A; 
#chains in the Genus database with same CATH homology
 2FAC A;  2KG6 A;  2LTE A;  2VSQ A;  2KGA A;  1KLP A;  2L0Q A;  3EJE A;  1HY8 A;  2AFE A;  2FHS C;  2KOR A;  2KOQ A;  2ROQ A;  2KGD A;  2FAE A;  2LL8 A;  2GDX A;  1DV5 A;  4HKG A;  2FAD A;  1DNY A;  2FQ2 A;  2FVA A;  4BPG A;  5KP8 B;  5KP6 B;  2KW2 A;  3GZL A;  1NQ4 A;  2KG9 A;  2XZ1 C;  2JU2 A;  2N98 A;  2N5H A;  1ACP A;  2AF8 A;  2FVF A;  4H2Y C;  2MF4 A;  2JGP A;  2LPK A;  3RG2 A;  3EJB A;  2JU1 A;  2EHS A;  2KWL A;  2DNW A;  4MRT C;  2LML A;  2AVA A;  4DG9 A;  1HQB A;  3LMO A;  2XZ0 D;  2K0Y A;  2QNW A;  3GZM A;  2CQ8 A;  1F80 D;  2FQ0 A;  2M5R A;  3CE7 A;  2FQ1 A;  4H2W C;  4IZ6 A;  1X3O A;  2LIU A;  2MVU A;  2GDW A;  2KGE A;  2FVE A;  2KG8 A;  4NEO A;  3NY7 B;  2N6Z A;  2KR5 A;  4BPH A;  2MVV A;  4R0M A;  2CG5 B;  2MY5 A;  2K94 A;  2N6Y A;  2CGQ A;  2LKI A;  4PWV B;  2K0X A;  2MD9 A;  2L9F A;  2CNR A;  2KOP A;  2PNG A;  4PXH B;  5CZD B;  5HVC A;  1VKU A;  2JQ4 A;  2LIW A;  2KOO A;  1AF8 A;  2MR7 A;  1T8K A;  2KOS A;  2N50 A;  5EJD A;  2MR8 A;  2X2B A;  1L0H A;  1OR5 A;  2K93 A;  2AFD A;  1L0I A;  3EJD A;  2N5I A;  4BPF A;  2EHT A;  2LOL A;  2K92 A;  4CA3 A;  2L22 A;  5HV8 A;  4H2X C;  5KP7 B;  2K2Q A;  2GDY A;  2L4B A;  2KGC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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