2KOQA

Nmr solution structures of 3-hydroxyoctanoyl-acp from streptomyces coelicolor fatty acid synthase
Total Genus 24
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
81
structure length
81
Chain Sequence
b'AATQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILDHQA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Recognition of intermediate functionality by acyl carrier protein over a complete cycle of fatty acid biosynthesis
pubmed doi rcsb
molecule keywords Acyl carrier protein
source organism Streptomyces coelicolor
molecule tags Transport protein
total genus 24
structure length 81
sequence length 81
ec nomenclature
pdb deposition date 2009-09-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00550 PP-binding Phosphopantetheine attachment site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1200.10 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A ACP-like 2koqA00
5KP7B 4IZ6A 2VSQA 2MR8A 2KORA 2KGAA 2L0QA 2N6YA 2FHSC 4MRTC 2KOQA 2GDWA 2LTEA 2N98A 2N6ZA 1AF8A 2M5RA 1X3OA 2LL8A 2MD9A 4NEOA 1DNYA 2CQ8A 2KWLA 1DV5A 2AVAA 2KGCA 5HVCA 2JU2A 2K0XA 2DNWA 2K0YA 1T8KA 2ROQA 2KG6A 4H2XC 1ACPA 2L9FA 5EJDA 3LMOA 2JQ4A 4PXHB 4H2WC 2K92A 2MR7A 2CNRA 2KGDA 2FACA 2MF4A 2KGEA 4R0MA 2KOPA 1HY8A 4PWVB 2GDXA 5HV8A 2XZ0D 2FQ1A 4BPFA 3CE7A 4BPGA 2FVFA 2AFEA 4BPHA 2LPKA 2AF8A 3EJEA 2EHTA 2X2BA 2EHSA 1HQBA 2KOSA 4H2YC 2N5IA 4DG9A 2MY5A 1L0HA 2CG5B 3GZLA 2JGPA 2AFDA 2LIUA 2N50A 2XZ1C 2QNWA 2FVAA 2K94A 2LMLA 4CA3A 4HKGA 1L0IA 2KG8A 2KG9A 3EJBA 2K2QA 3GZMA 2FAEA 2CGQA 1VKUA 2FQ2A 2MVUA 3EJDA 1NQ4A 2KW2A 2LOLA 2KR5A 2FVEA 3RG2A 2JU1A 3NY7B 2FQ0A 5KP8B 2FADA 2L4BA 2K93A 5CZDB 2N5HA 1F80D 2LKIA 2L22A 2LIWA 2PNGA 1OR5A 5KP6B 2MVVA 2KOOA 1KLPA 2GDYA
chains in the Genus database with same CATH superfamily
2MR8A 4XFYA 4COPA 4MRTC 2N6YA 2KOQA 2GDWA 2LTEA 2N98A 3H4EA 1X3OA 2ONTA 2L6EA 3CPWO 3CCRP 2CQ8A 1ZNVA 1DV5A 4U0FA 3DPHA 1VQKP 3CCMP 3GKLC 3P05A 1VQ7P 1D1DA 4GR6A 2JU2A 2PEKA 1T8KA 2ROQA 2GZIA 4H2XC 5HGOA 5EJDA 2JYLA 2JBGA 3DTJA 4PXHB 4H2WC 1A43A 2KGDA 2ERHA 4R0MA 1M6NA 1VHNA 1HY8A 2GDXA 5HV8A 2FQ1A 4XFZA 1S72P 4BPGA 2OTLP 2AFEA 3EJEA 2EHTA 1IMPA 1YHQP 3CCLP 3CXCO 3I55P 1K8AQ 2KOSA 4H2YC 2JGPA 2AFDA 2N50A 3M1MA 3H47A 2QNWA 3CCSP 2LMLA 4CA3A 4HKGA 2EG5A 1EOQA 3DS4A 3CCEP 2CGQA 3G29A 4XRQA 2XV6A 3CCQP 3NY7B 1K30A 5JPAA 4QKOA 1YI2P 2BHVA 2FQ0A 2EFJA 2K93A 5CZDB 1YITP 1M74A 2L22A 2KOOA 4COCA 4GR2A 3VRLC 2GDYA 3CCJP 4IZ6A 5HGMA 1RNIA 2GZFA 1IUQA 2KODA 2N6ZA 1AF8A 2M5RA 1DNYA 2M8NA 1FR2A 1GXGA 5DCKA 4PH0A 2DNWA 2KG6A 1UJZA 1VQ4P 1UNKA 3DS2A 2K92A 2MR7A 2CNRA 2FACA 2MF4A 2KGEA 3G26A 2KOPA 1Q7YQ 4PWVB 3CMEP 4M0IA 2LPKA 1K73Q 2X2BA 1YJ9P 1KD1Q 3RG6C 4DG9A 1W2BO 1E0HA 3I56P 2MY5A 4WYMA 5EW5E 2CG5B 1CEIA 2XT1A 1BAJA 3GJNA 1VQOP 1RO2A 2KG9A 1EIAA 3G0VA 2FAEA 2P9XA 2FQ2A 5HGLA 3E2DA 1AYIA 2KW2A 2OARA 5HGNA 1K9MQ 1ZMBA 3CMAP 2VLNA 5F2NA 1VQ8P 3DS1A 1OR5A 1Q82Q 3B5IA 4U0EA 1KLPA 2OTJP 5KP7B 2VSQA 3G4SP 2Z44A 2FHSC 1RO0A 1NJIQ 2JO0A 1VQ6P 2LL8A 3G6EP 2K5XA 1VQLP 2AVAA 3CC2P 1Z6MA 3Q20A 2PENA 1KC8Q 2NO8A 2VLQA 1M90Q 3G1GA 2GYKA 4U0AA 1JJ2O 1M6EX 2L9FA 2PY8A 3LMOA 2JYGA 2GZJA 3CD6P 1A8OA 2E1MA 2M8LA 2FVFA 3MGEA 4U0DA 1YJWP 4U0CA 5F2OA 2JAZA 4QNBA 3GZLA 3G28A 2LIUA 1QVFO 3CCUP 2GZGA 1YIJP 2QEXP 1EMVA 2EIAA 5F2KA 2GZEA 2VLOA 2KG8A 3GZMA 1VQ5P 2PEQA 2MVUA 3EJDA 5BS1A 3CC7P 4PH1A 1MZ8A 1NQ4A 4U0BA 5BS2A 2DGYA 2M8PA 2KR5A 2FVEA 3RG2A 3DS0A 5KP8B 2JB0A 1F80D 2LKIA 1VQMP 2PNGA 3CC4P 5KP6B 2MVVA 3CCVP 1KQSO 7CEIA 2KORA 2KGAA 2L0QA 3B4QA 1YJNP 3G1IA 1E6JP 2MD9A 4NEOA 2KWLA 2KGCA 5HVCA 2QA4P 1Q86Q 2K0XA 2K0YA 3H0DA 3NTEA 3G21A 1Q81Q 1VQNP 1ACPA 1N8RQ 4IPYA 1QRJA 2JQ4A 2Z46A 3HYBA 3DS5A 5I4TG 1BXIA 3HZQA 1VQ9P 1GXHA 2XZ0D 2CWOA 4BPFA 3CE7A 4BPHA 2AF8A 2Z45A 1GPJA 1VQPP 2EHSA 1QVGO 3OW2O 1HQBA 2K0DX 2PEJA 2N5IA 4XFXA 2PEMA 1L0HA 2BUOA 2LF4A 2XZ1C 2FVAA 2K94A 1IMQA 1L0IA 3EJBA 2K2QA 1AUMA 1VKUA 4F37A 2LOLA 2JU1A 3G71P 2WPTA 4XROA 4UHPB 3U43A 2FADA 2XXMA 2L4BA 2PEOA 2PEIA 2N5HA 3LRYA 2VLPA 2LIWA 3DS3A 1M1KQ 3WBHA
chains in the Genus database with same CATH topology
5KP7B 4IZ6A 2VSQA 2MR8A 2KORA 2KGAA 2L0QA 2N6YA 2FHSC 4MRTC 2KOQA 2GDWA 2LTEA 2N98A 2N6ZA 1AF8A 2M5RA 1X3OA 2LL8A 2MD9A 4NEOA 1DNYA 2CQ8A 2KWLA 1DV5A 2AVAA 2KGCA 5HVCA 2JU2A 2K0XA 2DNWA 2K0YA 1T8KA 2ROQA 2KG6A 4H2XC 1ACPA 2L9FA 5EJDA 3LMOA 2JQ4A 4PXHB 4H2WC 2K92A 2MR7A 2CNRA 2KGDA 2FACA 2MF4A 2KGEA 4R0MA 2KOPA 1HY8A 4PWVB 2GDXA 5HV8A 2XZ0D 2FQ1A 4BPFA 3CE7A 4BPGA 2FVFA 2AFEA 4BPHA 2LPKA 2AF8A 3EJEA 2EHTA 2X2BA 2EHSA 1HQBA 2KOSA 4H2YC 2N5IA 4DG9A 2MY5A 1L0HA 2CG5B 3GZLA 2JGPA 2AFDA 2LIUA 2N50A 2XZ1C 2QNWA 2FVAA 2K94A 2LMLA 4CA3A 4HKGA 1L0IA 2KG8A 2KG9A 3EJBA 2K2QA 3GZMA 2FAEA 2CGQA 1VKUA 2FQ2A 2MVUA 3EJDA 1NQ4A 2KW2A 2LOLA 2KR5A 2FVEA 3RG2A 2JU1A 3NY7B 2FQ0A 5KP8B 2FADA 2L4BA 2K93A 5CZDB 2N5HA 1F80D 2LKIA 2L22A 2LIWA 2PNGA 1OR5A 5KP6B 2MVVA 2KOOA 1KLPA 2GDYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KP7 B;  4IZ6 A;  2VSQ A;  2MR8 A;  2KOR A;  2KGA A;  2L0Q A;  2N6Y A;  2FHS C;  4MRT C;  2KOQ A;  2GDW A;  2LTE A;  2N98 A;  2N6Z A;  1AF8 A;  2M5R A;  1X3O A;  2LL8 A;  2MD9 A;  4NEO A;  1DNY A;  2CQ8 A;  2KWL A;  1DV5 A;  2AVA A;  2KGC A;  5HVC A;  2JU2 A;  2K0X A;  2DNW A;  2K0Y A;  1T8K A;  2ROQ A;  2KG6 A;  4H2X C;  1ACP A;  2L9F A;  5EJD A;  3LMO A;  2JQ4 A;  4PXH B;  4H2W C;  2K92 A;  2MR7 A;  2CNR A;  2KGD A;  2FAC A;  2MF4 A;  2KGE A;  4R0M A;  2KOP A;  1HY8 A;  4PWV B;  2GDX A;  5HV8 A;  2XZ0 D;  2FQ1 A;  4BPF A;  3CE7 A;  4BPG A;  2FVF A;  2AFE A;  4BPH A;  2LPK A;  2AF8 A;  3EJE A;  2EHT A;  2X2B A;  2EHS A;  1HQB A;  2KOS A;  4H2Y C;  2N5I A;  4DG9 A;  2MY5 A;  1L0H A;  2CG5 B;  3GZL A;  2JGP A;  2AFD A;  2LIU A;  2N50 A;  2XZ1 C;  2QNW A;  2FVA A;  2K94 A;  2LML A;  4CA3 A;  4HKG A;  1L0I A;  2KG8 A;  2KG9 A;  3EJB A;  2K2Q A;  3GZM A;  2FAE A;  2CGQ A;  1VKU A;  2FQ2 A;  2MVU A;  3EJD A;  1NQ4 A;  2KW2 A;  2LOL A;  2KR5 A;  2FVE A;  3RG2 A;  2JU1 A;  3NY7 B;  2FQ0 A;  5KP8 B;  2FAD A;  2L4B A;  2K93 A;  5CZD B;  2N5H A;  1F80 D;  2LKI A;  2L22 A;  2LIW A;  2PNG A;  1OR5 A;  5KP6 B;  2MVV A;  2KOO A;  1KLP A;  2GDY A; 
#chains in the Genus database with same CATH topology
 2MR8 A;  4XFY A;  4COP A;  4MRT C;  2N6Y A;  2KOQ A;  2GDW A;  2LTE A;  2N98 A;  3H4E A;  1X3O A;  2ONT A;  2L6E A;  3CPW O;  3CCR P;  2CQ8 A;  1ZNV A;  1DV5 A;  4U0F A;  3DPH A;  1VQK P;  3CCM P;  3GKL C;  3P05 A;  1VQ7 P;  1D1D A;  4GR6 A;  2JU2 A;  2PEK A;  1T8K A;  2ROQ A;  2GZI A;  4H2X C;  5HGO A;  5EJD A;  2JYL A;  2JBG A;  3DTJ A;  4PXH B;  4H2W C;  1A43 A;  2KGD A;  2ERH A;  4R0M A;  1M6N A;  1VHN A;  1HY8 A;  2GDX A;  5HV8 A;  2FQ1 A;  4XFZ A;  1S72 P;  4BPG A;  2OTL P;  2AFE A;  3EJE A;  2EHT A;  1IMP A;  1YHQ P;  3CCL P;  3CXC O;  3I55 P;  1K8A Q;  2KOS A;  4H2Y C;  2JGP A;  2AFD A;  2N50 A;  3M1M A;  3H47 A;  2QNW A;  3CCS P;  2LML A;  4CA3 A;  4HKG A;  2EG5 A;  1EOQ A;  3DS4 A;  3CCE P;  2CGQ A;  3G29 A;  4XRQ A;  2XV6 A;  3CCQ P;  3NY7 B;  1K30 A;  5JPA A;  4QKO A;  1YI2 P;  2BHV A;  2FQ0 A;  2EFJ A;  2K93 A;  5CZD B;  1YIT P;  1M74 A;  2L22 A;  2KOO A;  4COC A;  4GR2 A;  3VRL C;  2GDY A;  3CCJ P;  4IZ6 A;  5HGM A;  1RNI A;  2GZF A;  1IUQ A;  2KOD A;  2N6Z A;  1AF8 A;  2M5R A;  1DNY A;  2M8N A;  1FR2 A;  1GXG A;  5DCK A;  4PH0 A;  2DNW A;  2KG6 A;  1UJZ A;  1VQ4 P;  1UNK A;  3DS2 A;  2K92 A;  2MR7 A;  2CNR A;  2FAC A;  2MF4 A;  2KGE A;  3G26 A;  2KOP A;  1Q7Y Q;  4PWV B;  3CME P;  4M0I A;  2LPK A;  1K73 Q;  2X2B A;  1YJ9 P;  1KD1 Q;  3RG6 C;  4DG9 A;  1W2B O;  1E0H A;  3I56 P;  2MY5 A;  4WYM A;  5EW5 E;  2CG5 B;  1CEI A;  2XT1 A;  1BAJ A;  3GJN A;  1VQO P;  1RO2 A;  2KG9 A;  1EIA A;  3G0V A;  2FAE A;  2P9X A;  2FQ2 A;  5HGL A;  3E2D A;  1AYI A;  2KW2 A;  2OAR A;  5HGN A;  1K9M Q;  1ZMB A;  3CMA P;  2VLN A;  5F2N A;  1VQ8 P;  3DS1 A;  1OR5 A;  1Q82 Q;  3B5I A;  4U0E A;  1KLP A;  2OTJ P;  5KP7 B;  2VSQ A;  3G4S P;  2Z44 A;  2FHS C;  1RO0 A;  1NJI Q;  2JO0 A;  1VQ6 P;  2LL8 A;  3G6E P;  2K5X A;  1VQL P;  2AVA A;  3CC2 P;  1Z6M A;  3Q20 A;  2PEN A;  1KC8 Q;  2NO8 A;  2VLQ A;  1M90 Q;  3G1G A;  2GYK A;  4U0A A;  1JJ2 O;  1M6E X;  2L9F A;  2PY8 A;  3LMO A;  2JYG A;  2GZJ A;  3CD6 P;  1A8O A;  2E1M A;  2M8L A;  2FVF A;  3MGE A;  4U0D A;  1YJW P;  4U0C A;  5F2O A;  2JAZ A;  4QNB A;  3GZL A;  3G28 A;  2LIU A;  1QVF O;  3CCU P;  2GZG A;  1YIJ P;  2QEX P;  1EMV A;  2EIA A;  5F2K A;  2GZE A;  2VLO A;  2KG8 A;  3GZM A;  1VQ5 P;  2PEQ A;  2MVU A;  3EJD A;  5BS1 A;  3CC7 P;  4PH1 A;  1MZ8 A;  1NQ4 A;  4U0B A;  5BS2 A;  2DGY A;  2M8P A;  2KR5 A;  2FVE A;  3RG2 A;  3DS0 A;  5KP8 B;  2JB0 A;  1F80 D;  2LKI A;  1VQM P;  2PNG A;  3CC4 P;  5KP6 B;  2MVV A;  3CCV P;  1KQS O;  7CEI A;  2KOR A;  2KGA A;  2L0Q A;  3B4Q A;  1YJN P;  3G1I A;  1E6J P;  2MD9 A;  4NEO A;  2KWL A;  2KGC A;  5HVC A;  2QA4 P;  1Q86 Q;  2K0X A;  2K0Y A;  3H0D A;  3NTE A;  3G21 A;  1Q81 Q;  1VQN P;  1ACP A;  1N8R Q;  4IPY A;  1QRJ A;  2JQ4 A;  2Z46 A;  3HYB A;  3DS5 A;  5I4T G;  1BXI A;  3HZQ A;  1VQ9 P;  1GXH A;  2XZ0 D;  2CWO A;  4BPF A;  3CE7 A;  4BPH A;  2AF8 A;  2Z45 A;  1GPJ A;  1VQP P;  2EHS A;  1QVG O;  3OW2 O;  1HQB A;  2K0D X;  2PEJ A;  2N5I A;  4XFX A;  2PEM A;  1L0H A;  2BUO A;  2LF4 A;  2XZ1 C;  2FVA A;  2K94 A;  1IMQ A;  1L0I A;  3EJB A;  2K2Q A;  1AUM A;  1VKU A;  4F37 A;  2LOL A;  2JU1 A;  3G71 P;  2WPT A;  4XRO A;  4UHP B;  3U43 A;  2FAD A;  2XXM A;  2L4B A;  2PEO A;  2PEI A;  2N5H A;  3LRY A;  2VLP A;  2LIW A;  3DS3 A;  1M1K Q;  3WBH A; 
#chains in the Genus database with same CATH homology
 5KP7 B;  4IZ6 A;  2VSQ A;  2MR8 A;  2KOR A;  2KGA A;  2L0Q A;  2N6Y A;  2FHS C;  4MRT C;  2KOQ A;  2GDW A;  2LTE A;  2N98 A;  2N6Z A;  1AF8 A;  2M5R A;  1X3O A;  2LL8 A;  2MD9 A;  4NEO A;  1DNY A;  2CQ8 A;  2KWL A;  1DV5 A;  2AVA A;  2KGC A;  5HVC A;  2JU2 A;  2K0X A;  2DNW A;  2K0Y A;  1T8K A;  2ROQ A;  2KG6 A;  4H2X C;  1ACP A;  2L9F A;  5EJD A;  3LMO A;  2JQ4 A;  4PXH B;  4H2W C;  2K92 A;  2MR7 A;  2CNR A;  2KGD A;  2FAC A;  2MF4 A;  2KGE A;  4R0M A;  2KOP A;  1HY8 A;  4PWV B;  2GDX A;  5HV8 A;  2XZ0 D;  2FQ1 A;  4BPF A;  3CE7 A;  4BPG A;  2FVF A;  2AFE A;  4BPH A;  2LPK A;  2AF8 A;  3EJE A;  2EHT A;  2X2B A;  2EHS A;  1HQB A;  2KOS A;  4H2Y C;  2N5I A;  4DG9 A;  2MY5 A;  1L0H A;  2CG5 B;  3GZL A;  2JGP A;  2AFD A;  2LIU A;  2N50 A;  2XZ1 C;  2QNW A;  2FVA A;  2K94 A;  2LML A;  4CA3 A;  4HKG A;  1L0I A;  2KG8 A;  2KG9 A;  3EJB A;  2K2Q A;  3GZM A;  2FAE A;  2CGQ A;  1VKU A;  2FQ2 A;  2MVU A;  3EJD A;  1NQ4 A;  2KW2 A;  2LOL A;  2KR5 A;  2FVE A;  3RG2 A;  2JU1 A;  3NY7 B;  2FQ0 A;  5KP8 B;  2FAD A;  2L4B A;  2K93 A;  5CZD B;  2N5H A;  1F80 D;  2LKI A;  2L22 A;  2LIW A;  2PNG A;  1OR5 A;  5KP6 B;  2MVV A;  2KOO A;  1KLP A;  2GDY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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