2KPTA

Solution nmr structure of the n-terminal domain of cg2496 protein from corynebacterium glutamicum. northeast structural genomics consortium target cgr26a
Total Genus 47
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
148
structure length
148
Chain Sequence
TETYVLAESPEFYQDNVTDYTGQISSSDITNIQAAIDDVKASEQKVIFVVFLSSFDGVDPETWTQQALQANGGGNVLIYALAPEERQYGIQGGTQWTDAELDAANNAAFQALSQEDWAGSALALAESVGSSSSSSSGSSSLEHHHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords Putative secreted protein
publication title Solution NMR structure of the N-terminal domain of cg2496 protein from Corynebacterium glutamicum
rcsb
source organism Corynebacterium glutamicum
total genus 47
structure length 148
sequence length 148
ec nomenclature
pdb deposition date 2009-10-19
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.310.50 Alpha Beta Roll Diaminopimelate Epimerase; Chain A, domain 1 Diaminopimelate Epimerase; Chain A, domain 1 2kptA00
2LT2A 3PW9A 3PTJA 2MPBA 5ANPA 2KPTA 4OA3A 2KW7A 3PVHA
chains in the Genus database with same CATH superfamily
4GL6A 2GKEA 1K23A 4LG3A 1U1WA 1W62A 3ICJA 4JUUA 2PVZA 1T6KA 3W5WA 4K7GB 2LT2A 3IGHX 4Q2HA 2HAWA 1U0KA 2ZXPA 4K8LA 2ZXOA 4K7XA 5H2GA 3EDNA 3PW9A 3PTJA 2PW0A 2IW4A 3EJXA 4PY9A 5HA4A 1GQZA 1TM0A 1K20A 3PVHA 1SDJA 2EB0A 4IJZA 1YM5A 1QY9A 5IWEA 1U1XA 1U1VA 1XUBA 4LB0A 2ENXA 2YMAA 2GKJA 1BWZA 4JD7A 2Q9HA 1IR6A 1WPPA 1I74A 4Q60A 3FVEA 1WPMA 3G7KA 4J9XA 4JBDA 4OA3A 3EKMA 3WQZA 3G98A 2ZVFA 2KW7A 5H2YA 2QB6A 2QB7A 2Q9JA 2QB8A 5ANPA 1QYAA 4J9WA 5M47A 4RPAA 2AZPA 4JCIA 3DEVA 4LS9A 2ZXRA 1W61A 4IK0A 4DUNA 1XUAA 2OTNA 2H9FA 2MPBA 2KPTA 1S7JA
chains in the Genus database with same CATH topology
4GL6A 2GKEA 1K23A 4LG3A 1U1WA 1W62A 3ICJA 4JUUA 2PVZA 1T6KA 3W5WA 4K7GB 2LT2A 3IGHX 4Q2HA 2HAWA 1U0KA 2ZXPA 4K8LA 2ZXOA 4K7XA 5H2GA 3EDNA 3PW9A 3PTJA 2PW0A 2IW4A 3EJXA 4PY9A 5HA4A 1GQZA 1TM0A 1K20A 3PVHA 1SDJA 2EB0A 4IJZA 1YM5A 1QY9A 5IWEA 1U1XA 1U1VA 1XUBA 4LB0A 2ENXA 2YMAA 2GKJA 1BWZA 4JD7A 2Q9HA 1IR6A 1WPPA 1I74A 4Q60A 3FVEA 1WPMA 3G7KA 4J9XA 4JBDA 4OA3A 3EKMA 3WQZA 3G98A 2ZVFA 2KW7A 5H2YA 2QB6A 2QB7A 2Q9JA 2QB8A 5ANPA 1QYAA 4J9WA 5M47A 4RPAA 2AZPA 4JCIA 3DEVA 4LS9A 2ZXRA 1W61A 4IK0A 4DUNA 1XUAA 2OTNA 2H9FA 2MPBA 2KPTA 1S7JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2LT2 A;  3PW9 A;  3PTJ A;  2MPB A;  5ANP A;  2KPT A;  4OA3 A;  2KW7 A;  3PVH A; 
#chains in the Genus database with same CATH topology
 4GL6 A;  2GKE A;  1K23 A;  4LG3 A;  1U1W A;  1W62 A;  3ICJ A;  4JUU A;  2PVZ A;  1T6K A;  3W5W A;  4K7G B;  2LT2 A;  3IGH X;  4Q2H A;  2HAW A;  1U0K A;  2ZXP A;  4K8L A;  2ZXO A;  4K7X A;  5H2G A;  3EDN A;  3PW9 A;  3PTJ A;  2PW0 A;  2IW4 A;  3EJX A;  4PY9 A;  5HA4 A;  1GQZ A;  1TM0 A;  1K20 A;  3PVH A;  1SDJ A;  2EB0 A;  4IJZ A;  1YM5 A;  1QY9 A;  5IWE A;  1U1X A;  1U1V A;  1XUB A;  4LB0 A;  2ENX A;  2YMA A;  2GKJ A;  1BWZ A;  4JD7 A;  2Q9H A;  1IR6 A;  1WPP A;  1I74 A;  4Q60 A;  3FVE A;  1WPM A;  3G7K A;  4J9X A;  4JBD A;  4OA3 A;  3EKM A;  3WQZ A;  3G98 A;  2ZVF A;  2KW7 A;  5H2Y A;  2QB6 A;  2QB7 A;  2Q9J A;  2QB8 A;  5ANP A;  1QYA A;  4J9W A;  5M47 A;  4RPA A;  2AZP A;  4JCI A;  3DEV A;  4LS9 A;  2ZXR A;  1W61 A;  4IK0 A;  4DUN A;  1XUA A;  2OTN A;  2H9F A;  2MPB A;  2KPT A;  1S7J A; 
#chains in the Genus database with same CATH homology
 4GL6 A;  2GKE A;  1K23 A;  4LG3 A;  1U1W A;  1W62 A;  3ICJ A;  4JUU A;  2PVZ A;  1T6K A;  3W5W A;  4K7G B;  2LT2 A;  3IGH X;  4Q2H A;  2HAW A;  1U0K A;  2ZXP A;  4K8L A;  2ZXO A;  4K7X A;  5H2G A;  3EDN A;  3PW9 A;  3PTJ A;  2PW0 A;  2IW4 A;  3EJX A;  4PY9 A;  5HA4 A;  1GQZ A;  1TM0 A;  1K20 A;  3PVH A;  1SDJ A;  2EB0 A;  4IJZ A;  1YM5 A;  1QY9 A;  5IWE A;  1U1X A;  1U1V A;  1XUB A;  4LB0 A;  2ENX A;  2YMA A;  2GKJ A;  1BWZ A;  4JD7 A;  2Q9H A;  1IR6 A;  1WPP A;  1I74 A;  4Q60 A;  3FVE A;  1WPM A;  3G7K A;  4J9X A;  4JBD A;  4OA3 A;  3EKM A;  3WQZ A;  3G98 A;  2ZVF A;  2KW7 A;  5H2Y A;  2QB6 A;  2QB7 A;  2Q9J A;  2QB8 A;  5ANP A;  1QYA A;  4J9W A;  5M47 A;  4RPA A;  2AZP A;  4JCI A;  3DEV A;  4LS9 A;  2ZXR A;  1W61 A;  4IK0 A;  4DUN A;  1XUA A;  2OTN A;  2H9F A;  2MPB A;  2KPT A;  1S7J A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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