2L10A

Structure of the talin rod residues, domain c
Total Genus 60
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
60
sequence length
158
structure length
158
Chain Sequence
GIDPFTQRDVDNALRAVGDASKRLLSDLLPPSTGTFQEAQSRLNEAAAGLNQAATELVQASRGTPQDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQLAAAARAVTDSINQLITMCTQQA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Structural protein
molecule keywords Talin-1
publication title RIAM and vinculin binding to talin are mutually exclusive and regulate adhesion assembly and turnover.
pubmed doi rcsb
source organism Mus musculus
total genus 60
structure length 158
sequence length 158
ec nomenclature
pdb deposition date 2010-07-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1420.10 Mainly Alpha Up-down Bundle A middle domain of Talin 1 Talin, central domain 2l10A00
4F7GB 3AY5A 2KVPA 1SJ8A 1SJ7A 2L10A 3FYQA 2KGXA 4W8PA 2L7NA 3DYJA 5FZTA 2X0CA 2KBBA
chains in the Genus database with same CATH superfamily
5HXEA 3AY5A 5JDHA 2XQYA 1SJ8A 5HXHA 2L10A 3FYQA 3VJZA 5JDFA 5JDGA 2L7NA 5HYAA 4ECGA 3AT7A 3V5SA 3WURA 2KVPA 5HXSA 5JDNA 5T1DA 3WSCA 2MTCA 4W8PA 5HWYA 2X0CA 4F7GB 3M1CA 4ONRA 5JDMA 5HWXA 2LQUA 3PF0A 5HXRA 5JDQA 3DYJA 4BGOA 3PHF1 2KBBA 5HXCA 3V5UA 1SJ7A 5JDLA 2KGXA 5FZTA
chains in the Genus database with same CATH topology
4F7GB 3AY5A 2KVPA 1SJ8A 1SJ7A 2L10A 3FYQA 2KGXA 4W8PA 2L7NA 3DYJA 5FZTA 2X0CA 2KBBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F7G B;  3AY5 A;  2KVP A;  1SJ8 A;  1SJ7 A;  2L10 A;  3FYQ A;  2KGX A;  4W8P A;  2L7N A;  3DYJ A;  5FZT A;  2X0C A;  2KBB A; 
#chains in the Genus database with same CATH topology
 5HXE A;  3AY5 A;  5JDH A;  2XQY A;  1SJ8 A;  5HXH A;  2L10 A;  3FYQ A;  3VJZ A;  5JDF A;  5JDG A;  2L7N A;  5HYA A;  4ECG A;  3AT7 A;  3V5S A;  3WUR A;  2KVP A;  5HXS A;  5JDN A;  5T1D A;  3WSC A;  2MTC A;  4W8P A;  5HWY A;  2X0C A;  4F7G B;  3M1C A;  4ONR A;  5JDM A;  5HWX A;  2LQU A;  3PF0 A;  5HXR A;  5JDQ A;  3DYJ A;  4BGO A;  3PHF 1;  2KBB A;  5HXC A;  3V5U A;  1SJ7 A;  5JDL A;  2KGX A;  5FZT A; 
#chains in the Genus database with same CATH homology
 4F7G B;  3AY5 A;  2KVP A;  1SJ8 A;  1SJ7 A;  2L10 A;  3FYQ A;  2KGX A;  4W8P A;  2L7N A;  3DYJ A;  5FZT A;  2X0C A;  2KBB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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