2L21A

Chicken igf2r domain 11
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
148
structure length
148
Chain Sequence
MKSNVQNDCRVTNPATGHLFDLTSLKRESGYTITDSHNRKIELNVCAEAKSSCANGAAVCITDGPKTLNAGKLSKTLTYEDQVLKLVYEDGDPCPTDLKMKHKSYFSFVCKSDAGDDSQPVFLSFDEQTCTSYFSWHTSLACEEEVPR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
molecule keywords Cation-independent mannose-6-phosphate receptor
publication title CD loop dependency of the IGF2: M6P/IGF2 receptor binding interaction predates imprinting
rcsb
source organism Gallus gallus
total genus 29
structure length 148
sequence length 148
ec nomenclature
pdb deposition date 2010-08-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.130.10 Mainly Beta Distorted Sandwich Cation-dependent Mannose-6-phosphate Receptor; Chain A Mannose-6-phosphate receptor binding domain 2l21A00
2M68A 2L21A 1GP3A 2N1HA 2V5OA 3K43A 2L29A 2V5NA 2LLAA 1KEOA 3AIHA 2LVXA 3K41A 1GP0A 1SZ0A 2RLBA 5IEIA 2M6TA 1E6FA 2RL8A 2RL9A 1M6PA 2L2GA 1GQBA 3CY4A 2KVBA 4XQMA 2CNJD 1Q25A 1SYOA 2L2AA 2RL7A 2KVAA 3K42A 1C39A
chains in the Genus database with same CATH superfamily
2M68A 2L21A 1GP3A 2N1HA 2V5OA 3K43A 2L29A 2V5NA 2LLAA 1KEOA 3AIHA 2LVXA 3K41A 1GP0A 1SZ0A 2RLBA 5IEIA 2M6TA 1E6FA 2RL8A 2RL9A 1M6PA 2L2GA 1GQBA 3CY4A 2KVBA 4XQMA 2CNJD 1Q25A 1SYOA 2L2AA 2RL7A 2KVAA 3K42A 1C39A
chains in the Genus database with same CATH topology
2M68A 2L21A 1GP3A 2N1HA 2V5OA 3K43A 2L29A 2V5NA 2LLAA 1KEOA 3AIHA 2LVXA 3K41A 1GP0A 1SZ0A 2RLBA 5IEIA 2M6TA 1E6FA 2RL8A 2RL9A 1M6PA 2L2GA 1GQBA 3CY4A 2KVBA 4XQMA 2CNJD 1Q25A 1SYOA 2L2AA 2RL7A 2KVAA 3K42A 1C39A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2M68 A;  2L21 A;  1GP3 A;  2N1H A;  2V5O A;  3K43 A;  2L29 A;  2V5N A;  2LLA A;  1KEO A;  3AIH A;  2LVX A;  3K41 A;  1GP0 A;  1SZ0 A;  2RLB A;  5IEI A;  2M6T A;  1E6F A;  2RL8 A;  2RL9 A;  1M6P A;  2L2G A;  1GQB A;  3CY4 A;  2KVB A;  4XQM A;  2CNJ D;  1Q25 A;  1SYO A;  2L2A A;  2RL7 A;  2KVA A;  3K42 A;  1C39 A; 
#chains in the Genus database with same CATH topology
 2M68 A;  2L21 A;  1GP3 A;  2N1H A;  2V5O A;  3K43 A;  2L29 A;  2V5N A;  2LLA A;  1KEO A;  3AIH A;  2LVX A;  3K41 A;  1GP0 A;  1SZ0 A;  2RLB A;  5IEI A;  2M6T A;  1E6F A;  2RL8 A;  2RL9 A;  1M6P A;  2L2G A;  1GQB A;  3CY4 A;  2KVB A;  4XQM A;  2CNJ D;  1Q25 A;  1SYO A;  2L2A A;  2RL7 A;  2KVA A;  3K42 A;  1C39 A; 
#chains in the Genus database with same CATH homology
 2M68 A;  2L21 A;  1GP3 A;  2N1H A;  2V5O A;  3K43 A;  2L29 A;  2V5N A;  2LLA A;  1KEO A;  3AIH A;  2LVX A;  3K41 A;  1GP0 A;  1SZ0 A;  2RLB A;  5IEI A;  2M6T A;  1E6F A;  2RL8 A;  2RL9 A;  1M6P A;  2L2G A;  1GQB A;  3CY4 A;  2KVB A;  4XQM A;  2CNJ D;  1Q25 A;  1SYO A;  2L2A A;  2RL7 A;  2KVA A;  3K42 A;  1C39 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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