2L73A

Structure of the noxo1b px domain
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
143
structure length
143
Chain Sequence
AGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKETFPVEAGLLRRSDRVLPKLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRVILPTPEEQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase regulator
molecule keywords NADPH oxidase organizer 1
publication title Structure of the NOXO1b PX domain
rcsb
source organism Homo sapiens
total genus 35
structure length 143
sequence length 143
ec nomenclature
pdb deposition date 2010-12-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00787 PX PX domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1520.10 Alpha Beta 2-Layer Sandwich PX Domain Phox-like domain 2l73A00
2V6VA 4P2JA 2REDA 2CZOA 2YPSA 2RAIA 2WWEA 1GD5A 4PZGA 4IKBA 2IWLX 1XTEA 3LUIA 4BGJA 3FOGA 3DYTA 4OXWA 2L73A 3IQ2A 2CSKA 4AKVA 2REAA 1OCSA 3HPBA 4HASA 2RAKA 4P2IA 4PQPA 4IKBB 4PQOA 1KMDA 1OCUA 4IKDA 3HPCX 4AZ9A 2ETTA 3P0CA 2AR5A 2DYBA 2V14A 2I4KA 2RAJA 1H6HA 1KQ6A 1O7KA 1XTNA 4ON3A
chains in the Genus database with same CATH superfamily
2V6VA 4P2JA 2REDA 2CZOA 2YPSA 2RAIA 2WWEA 1GD5A 4PZGA 4IKBA 2IWLX 1XTEA 3LUIA 4BGJA 3FOGA 3DYTA 4OXWA 2L73A 3IQ2A 2CSKA 4AKVA 2REAA 1OCSA 3HPBA 4HASA 2RAKA 4P2IA 4PQPA 4IKBB 4PQOA 1KMDA 1OCUA 4IKDA 3HPCX 4AZ9A 2ETTA 3P0CA 2AR5A 2DYBA 2V14A 2I4KA 2RAJA 1H6HA 1KQ6A 1O7KA 1XTNA 4ON3A
chains in the Genus database with same CATH topology
2V6VA 4P2JA 2REDA 2CZOA 2YPSA 2RAIA 2WWEA 1GD5A 4PZGA 4IKBA 2IWLX 1XTEA 3LUIA 4BGJA 3FOGA 3DYTA 4OXWA 2L73A 3IQ2A 2CSKA 4AKVA 2REAA 1OCSA 3HPBA 4HASA 2RAKA 4P2IA 4PQPA 4IKBB 4PQOA 1KMDA 1OCUA 4IKDA 3HPCX 4AZ9A 2ETTA 3P0CA 2AR5A 2DYBA 2V14A 2I4KA 2RAJA 1H6HA 1KQ6A 1O7KA 1XTNA 4ON3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V6V A;  4P2J A;  2RED A;  2CZO A;  2YPS A;  2RAI A;  2WWE A;  1GD5 A;  4PZG A;  4IKB A;  2IWL X;  1XTE A;  3LUI A;  4BGJ A;  3FOG A;  3DYT A;  4OXW A;  2L73 A;  3IQ2 A;  2CSK A;  4AKV A;  2REA A;  1OCS A;  3HPB A;  4HAS A;  2RAK A;  4P2I A;  4PQP A;  4IKB B;  4PQO A;  1KMD A;  1OCU A;  4IKD A;  3HPC X;  4AZ9 A;  2ETT A;  3P0C A;  2AR5 A;  2DYB A;  2V14 A;  2I4K A;  2RAJ A;  1H6H A;  1KQ6 A;  1O7K A;  1XTN A;  4ON3 A; 
#chains in the Genus database with same CATH topology
 2V6V A;  4P2J A;  2RED A;  2CZO A;  2YPS A;  2RAI A;  2WWE A;  1GD5 A;  4PZG A;  4IKB A;  2IWL X;  1XTE A;  3LUI A;  4BGJ A;  3FOG A;  3DYT A;  4OXW A;  2L73 A;  3IQ2 A;  2CSK A;  4AKV A;  2REA A;  1OCS A;  3HPB A;  4HAS A;  2RAK A;  4P2I A;  4PQP A;  4IKB B;  4PQO A;  1KMD A;  1OCU A;  4IKD A;  3HPC X;  4AZ9 A;  2ETT A;  3P0C A;  2AR5 A;  2DYB A;  2V14 A;  2I4K A;  2RAJ A;  1H6H A;  1KQ6 A;  1O7K A;  1XTN A;  4ON3 A; 
#chains in the Genus database with same CATH homology
 2V6V A;  4P2J A;  2RED A;  2CZO A;  2YPS A;  2RAI A;  2WWE A;  1GD5 A;  4PZG A;  4IKB A;  2IWL X;  1XTE A;  3LUI A;  4BGJ A;  3FOG A;  3DYT A;  4OXW A;  2L73 A;  3IQ2 A;  2CSK A;  4AKV A;  2REA A;  1OCS A;  3HPB A;  4HAS A;  2RAK A;  4P2I A;  4PQP A;  4IKB B;  4PQO A;  1KMD A;  1OCU A;  4IKD A;  3HPC X;  4AZ9 A;  2ETT A;  3P0C A;  2AR5 A;  2DYB A;  2V14 A;  2I4K A;  2RAJ A;  1H6H A;  1KQ6 A;  1O7K A;  1XTN A;  4ON3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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