2LXSA

Allosteric communication in the kix domain proceeds through dynamic re-packing of the hydrophobic core
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
87
structure length
87
Chain Sequence
GVRKGWHEHVTQDLRSHLVHKLVQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEKRRSRL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords CREB-binding protein
publication title Allosteric Communication in the KIX Domain Proceeds through Dynamic Repacking of the Hydrophobic Core.
pubmed doi rcsb
source organism Homo sapiens
total genus 30
structure length 87
sequence length 87
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 2012-08-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02172 KIX KIX domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.20 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Coactivator CBP, KIX domain 2lxsA00
2K0NA 2AGHB 4D7XA 1SB0A 2LXTA 2GUTA 2KWFA 2LXSA 2LQHA 4I9OA 2LQIA 1KDXA
chains in the Genus database with same CATH superfamily
1HK4A 2BXPA 3JRYA 3SIVB 3KJLA 1IJGA 4IW2A 4L9KA 1LOTA 2BX8A 4JK4A 2XVVA 4I9OA 2NQOA 2DBXA 1MIYA 3NVIA 1E7CA 2NNWA 2EFHA 4C31B 3MHHB 4G01A 3VQIA 2DYMA 1AO6A 2XSIA 3FWBC 4WA6B 2E0XA 5ID9A 1KXPD 4LB9A 5IFOA 1E7GA 2OT3A 4N0UD 5GHKA 4BKEA 4GDKB 1E7IA 1MIVA 3MHSB 4OR0A 2BXEA 3M99C 5BPKA 1UORA 3A73A 4S1YA 1MA9A 4DM0A 1GNIA 1VZSA 2KWFA 4HGMB 3H37A 4BY9C 3NVMA 1KDXA 4LA0A 1KW2A 4EMXA 5IIUA 2BXMA 2VUEA 4FJCB 2BXLA 4N3ZA 4TQ1A 1FOUA 2BXHA 1JNBA 2AJEA 3UIVA 4L8UA 2EFCA 3V09A 2JUHA 1H5WA 1LNSA 2V36A 1BKEA 4D7XA 5HOZA 5IJFA 4F5UA 2VUFA 3LU7A 2YDFA 2VDBA 2E0YA 1VFIA 1MUHA 1HK5A 2BXNA 3GQUA 1MM8A 2BXKA 2I2ZA 3BPJA 3B9MA 5DQFA 3JQZA 3A75A 1E78A 3LU8A 4W4UB 4TQ0A 2LQHA 4GDLB 5IIHA 2XVWA 1E7FA 4LUHA 5DBYA 2QMCA 2XVUA 4F5VA 5FUOA 1HK2A 1H9ZA 4F5TA 4L9QA 3ECPA 1BJ5A 2AGHB 4K2CA 4OT2A 1NT2B 1O9XA 5IJEA 2XMOA 3TDLA 4ZC6A 4E99A 2Z8JA 3FWCC 4Z69A 4G03A 3FNMA 1N5UA 2BXDA 4G04A 4NAWB 2I30A 4IW1A 4F5SA 1MUSA 4ZCGA 1E7HA 2QM6A 3NMUA 2GUTA 4M70B 1TF0A 2Z8KA 2BXQA 2BXOA 1J7EA 5D7GA 5IJ5A 1HA2A 4FIPB 3B9LA 5ID7A 5GINA 1J78A 4ZBKA 2ROHA 1E7EA 3ICXA 4LB2A 3WHSA 3PLAA 2BXGA 4ZBQA 1SB0A 2LXTA 3G9KD 4J2VA 3KIKA 2OZBB 4GDXA 3V03A 4DHXB 2EFDA 1GNJA 1MIWA 3GQXA 4FK5B 3NVKA 3WHRA 2BXAA 3GA9L 1HK1A 4Z9OA 1HK3A 1TXUA 5B5TA 4OTUA 1BM0A 3WHQA 3CX9A 2XVQA 4PO0A 3V08A 4OTTA 3SQJA 2DYOA 2K0NA 4N0FD 5IIXA 5GIOA 3SIUB 2DBUA 4HGKA 1E7AA 2LOQA 2BXFA 5GIPA 4ZUXV 3W1SA 4MBEC 2BXIA 2LQIA 2DBWA 2QHBA 2DG5A 2CKXA 4LUFA 2XW1A 2XW0A 4GG2A 2BXCA 2LXSA 2KBZA 1E7BA 2EFEA 3H3AA 2BXBA 4K71A 4ZBRA 2Z8IA 3LU6A
chains in the Genus database with same CATH topology
2K0NA 2AGHB 4D7XA 1SB0A 2LXTA 2GUTA 2KWFA 2LXSA 2LQHA 4I9OA 2LQIA 1KDXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K0N A;  2AGH B;  4D7X A;  1SB0 A;  2LXT A;  2GUT A;  2KWF A;  2LXS A;  2LQH A;  4I9O A;  2LQI A;  1KDX A; 
#chains in the Genus database with same CATH topology
 1HK4 A;  2BXP A;  3JRY A;  3SIV B;  3KJL A;  1IJG A;  4IW2 A;  4L9K A;  1LOT A;  2BX8 A;  4JK4 A;  2XVV A;  4I9O A;  2NQO A;  2DBX A;  1MIY A;  3NVI A;  1E7C A;  2NNW A;  2EFH A;  4C31 B;  3MHH B;  4G01 A;  3VQI A;  2DYM A;  1AO6 A;  2XSI A;  3FWB C;  4WA6 B;  2E0X A;  5ID9 A;  1KXP D;  4LB9 A;  5IFO A;  1E7G A;  2OT3 A;  4N0U D;  5GHK A;  4BKE A;  4GDK B;  1E7I A;  1MIV A;  3MHS B;  4OR0 A;  2BXE A;  3M99 C;  5BPK A;  1UOR A;  3A73 A;  4S1Y A;  1MA9 A;  4DM0 A;  1GNI A;  1VZS A;  2KWF A;  4HGM B;  3H37 A;  4BY9 C;  3NVM A;  1KDX A;  4LA0 A;  1KW2 A;  4EMX A;  5IIU A;  2BXM A;  2VUE A;  4FJC B;  2BXL A;  4N3Z A;  4TQ1 A;  1FOU A;  2BXH A;  1JNB A;  2AJE A;  3UIV A;  4L8U A;  2EFC A;  3V09 A;  2JUH A;  1H5W A;  1LNS A;  2V36 A;  1BKE A;  4D7X A;  5HOZ A;  5IJF A;  4F5U A;  2VUF A;  3LU7 A;  2YDF A;  2VDB A;  2E0Y A;  1VFI A;  1MUH A;  1HK5 A;  2BXN A;  3GQU A;  1MM8 A;  2BXK A;  2I2Z A;  3BPJ A;  3B9M A;  5DQF A;  3JQZ A;  3A75 A;  1E78 A;  3LU8 A;  4W4U B;  4TQ0 A;  2LQH A;  4GDL B;  5IIH A;  2XVW A;  1E7F A;  4LUH A;  5DBY A;  2QMC A;  2XVU A;  4F5V A;  5FUO A;  1HK2 A;  1H9Z A;  4F5T A;  4L9Q A;  3ECP A;  1BJ5 A;  2AGH B;  4K2C A;  4OT2 A;  1NT2 B;  1O9X A;  5IJE A;  2XMO A;  3TDL A;  4ZC6 A;  4E99 A;  2Z8J A;  3FWC C;  4Z69 A;  4G03 A;  3FNM A;  1N5U A;  2BXD A;  4G04 A;  4NAW B;  2I30 A;  4IW1 A;  4F5S A;  1MUS A;  4ZCG A;  1E7H A;  2QM6 A;  3NMU A;  2GUT A;  4M70 B;  1TF0 A;  2Z8K A;  2BXQ A;  2BXO A;  1J7E A;  5D7G A;  5IJ5 A;  1HA2 A;  4FIP B;  3B9L A;  5ID7 A;  5GIN A;  1J78 A;  4ZBK A;  2ROH A;  1E7E A;  3ICX A;  4LB2 A;  3WHS A;  3PLA A;  2BXG A;  4ZBQ A;  1SB0 A;  2LXT A;  3G9K D;  4J2V A;  3KIK A;  2OZB B;  4GDX A;  3V03 A;  4DHX B;  2EFD A;  1GNJ A;  1MIW A;  3GQX A;  4FK5 B;  3NVK A;  3WHR A;  2BXA A;  3GA9 L;  1HK1 A;  4Z9O A;  1HK3 A;  1TXU A;  5B5T A;  4OTU A;  1BM0 A;  3WHQ A;  3CX9 A;  2XVQ A;  4PO0 A;  3V08 A;  4OTT A;  3SQJ A;  2DYO A;  2K0N A;  4N0F D;  5IIX A;  5GIO A;  3SIU B;  2DBU A;  4HGK A;  1E7A A;  2LOQ A;  2BXF A;  5GIP A;  4ZUX V;  3W1S A;  4MBE C;  2BXI A;  2LQI A;  2DBW A;  2QHB A;  2DG5 A;  2CKX A;  4LUF A;  2XW1 A;  2XW0 A;  4GG2 A;  2BXC A;  2LXS A;  2KBZ A;  1E7B A;  2EFE A;  3H3A A;  2BXB A;  4K71 A;  4ZBR A;  2Z8I A;  3LU6 A; 
#chains in the Genus database with same CATH homology
 2K0N A;  2AGH B;  4D7X A;  1SB0 A;  2LXT A;  2GUT A;  2KWF A;  2LXS A;  2LQH A;  4I9O A;  2LQI A;  1KDX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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