2MMBA

Nmr structure of the protein yp_001712342.1 from acinetobacter baumannii
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
107
structure length
107
Chain Sequence
GTDFGTTNNFVSPNLQLKQNVLPPTPKNIPLPAFGQRIIGWGTGAEGARQRLENIQPADVSMIKKQGTTLEMITAWQDFYEQEQQRNENNPTAKYRARLMKKIADLW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Structural genomics, unknown function
molecule keywords Uncharacterized protein
publication title NMR structure of the protein YP_002937094.1 from Eubacterium rectale
rcsb
source organism Acinetobacter baumannii
total genus 22
structure length 107
sequence length 107
ec nomenclature
pdb deposition date 2014-03-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF16309 DUF4951 Domian of unknown function (DUF4951)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.230 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2mmbA00
2MMBA
chains in the Genus database with same CATH superfamily
2OZSA 3C6OB 4J2EA 4EYWA 3KD1E 3SPYA 1XU3E 3MKSB 1FZ1E 3NGIA 4JRQA 3SNNA 2MW2A 1IH7A 1FZ6E 4M45A 5IZ7A 3UIQA 4X5MA 2K5SA 1JW2A 3SPZA 1IG9A 3OGKB 3HGKE 1FZ8E 4AKGA 3J27A 3LD8A 3QEXA 3TAFA 1XVDE 3SQ2A 3CFPA 5IBKB 3QNOA 4DTJA 4FJHA 1CLQA 2E32A 4FJJA 1NEXB 4J2AA 4M42A 3SQ4A 1MTYG 1XVBE 2DTUA 4E3SA 3SQ1A 4M3ZA 2FYOA 3N1EA 2OVRB 3L8BA 3CQ8A 4DTNA 2B8IA 4B08A 4FJ7A 5H37A 2B7MA 4KI6A 2PFTA 1XL3C 4DTRA 3QETA 2P1MB 3SVIA 4JS4A 3SUNA 4AI6A 2ATQA 4M3RA 4KHUA 4FK4A 2MZWB 5IREA 4KHWA 2HD0A 3TABA 4FJGA 4JRPA 1FZ5E 2DY4A 1XVFE 4HCBA 2OZMA 2VJ4A 4M3UA 1FZ7E 2VIXA 4DTSA 4I9QA 3SQ0A 4KHYA 3SI6A 4J2BA 4M3WA 1FXXA 4DTXA 3C6PB 4DTMA 4I6JB 3RMDA 1FZ3E 4HCCA 1FZ4E 2JH8A 1FZIE 4M3YA 4AKHA 1XVCE 4FJ8A 3TL8B 3C94A 2OVPB 3RMAA 2JQTA 1MHYG 4M3XA 1XVGE 4DU1A 3E4WA 3RMBA 4KI4A 3BVOA 1XMHE 2E31A 2JHAA 3L0MA 4X5NA 2P5GA 4FJNA 2MMBA 2JPNA 3C95A 3E4YA 1FZ9E 3LZIA 4QNCA 4DTOA 3J2PA 1WAJA 4DU4A 4IT5A 2H4TA 3QEPA 4FVMA 3LDSA 4J2DA 2JHCA 2LF6A 3C6NB 3SJJA 1Q9YA 1P22A 4ADOA 1FZ0E 4M41A 4RNGA 2JH9A 3S9HA 3L2OB 2OVQB 3HL8A 3SUOA 2OYQA 2DEBA 3L1NA 3N1BA 4FK0A 4EPHA 3SCXA 3QNNA 1XU5E 4DTUA 2P1QB 4FJKA 4ICGC 1MHZG 3TAGA 3TJYA 4DU3A 3QEWA 1FZHE 3NAEA 4FJ9A 2P1OB 2QXFA 3KD5E 4RL5A 4FJLA 1Q9XA 3QERA 3SUQA 1FPOA 3CFOA 4RG8A 2RCUA 3UO3A 4FJ5A 4FJXA 4EP9A 1LDKE 4GAMC 3V7DB 2P5OA 4KHSA 2B1EA 2P1PB 4I9LA 3OGLB 4KHQA 1WAFA 3HGLA 3WSOA 4JS5A 3RWUA 3K2OA 3OGMB 4QNDA 3NCIA 1XMFE 3LZJA 3LDBA 3QEIA 3QEVA 1XVEE 1FS1A 1FYZE 2YB5A 2FW3A 3TAEA 3UO2A 4FJMA 1FZ2E 3NDKA 2PFVA 4KHNA 3QESA 1XMGE 1MMOG 2P1NB 3RMCA 4M3TA 3NE6A 2LF3A 3CFRA 4FJIA 3HP9A 1N1CA 2JHPA 2RKHA 4E4BA 4FK2A 3SUPA 4AKIA 4DTPA 2VJ5A 3NHGA 4ADNA
chains in the Genus database with same CATH topology
2OZSA 3C6OB 4J2EA 4EYWA 3KD1E 3SPYA 1XU3E 3MKSB 1FZ1E 3NGIA 4JRQA 3SNNA 3UIQA 1IH7A 1FZ6E 4M45A 5IZ7A 4X5MA 3SPZA 1IG9A 3OGKB 3HGKE 1FZ8E 4AKGA 3J27A 3LD8A 3QEXA 3TAFA 1XVDE 3SQ2A 3CFPA 5IBKB 3QNOA 4DTJA 4FJHA 1CLQA 2E32A 4FJJA 1NEXB 4J2AA 4M42A 3SQ4A 1MTYG 1XVBE 2DTUA 4E3SA 3SQ1A 4M3ZA 2FYOA 3N1EA 2OVRB 3L8BA 3CQ8A 4DTNA 2B8IA 4B08A 4FJ7A 5H37A 2B7MA 4KI6A 2PFTA 1XL3C 4DTRA 3QETA 2P1MB 3SVIA 4JS4A 3SUNA 4AI6A 2ATQA 4M3RA 4KHUA 4FK4A 2MZWB 5IREA 4KHWA 2HD0A 3TABA 4FJGA 4JRPA 1FZ5E 2DY4A 1XVFE 4HCBA 2OZMA 2VJ4A 4M3UA 1FZ7E 2VIXA 4DTSA 4I9QA 3SQ0A 4KHYA 3SI6A 4J2BA 4M3WA 1FXXA 4DTXA 3C6PB 4DTMA 4I6JB 3RMDA 1FZ3E 4HCCA 1FZ4E 2JH8A 1FZIE 4M3YA 4AKHA 1XVCE 4FJ8A 3TL8B 3C94A 2OVPB 3RMAA 1MHYG 4M3XA 1XVGE 4DU1A 3E4WA 3RMBA 4KI4A 1XMHE 2E31A 2JHAA 3L0MA 4X5NA 2P5GA 4FJNA 2MMBA 2JPNA 3C95A 3E4YA 1FZ9E 3LZIA 4QNCA 4DTOA 3J2PA 1WAJA 4DU4A 2H4TA 3QEPA 4FVMA 3LDSA 4J2DA 2JHCA 2LF6A 3C6NB 3SJJA 1Q9YA 1P22A 4ADOA 1FZ0E 4M41A 4RNGA 2JH9A 3S9HA 3L2OB 2OVQB 3HL8A 3SUOA 2OYQA 2DEBA 3L1NA 3N1BA 4FK0A 4EPHA 3SCXA 3QNNA 1XU5E 4DTUA 2P1QB 4FJKA 1MHZG 3TAGA 3TJYA 4DU3A 3QEWA 1FZHE 3NAEA 4FJ9A 2P1OB 2QXFA 3KD5E 4RL5A 4FJLA 1Q9XA 3QERA 3SUQA 3CFOA 4RG8A 2RCUA 4FJXA 4FJ5A 4EP9A 1LDKE 4GAMC 3V7DB 2P5OA 4KHSA 2B1EA 2P1PB 4I9LA 3OGLB 4KHQA 1WAFA 3HGLA 3WSOA 4JS5A 3RWUA 3K2OA 3OGMB 4QNDA 3NCIA 1XMFE 3LZJA 3LDBA 3QEIA 3QEVA 1XVEE 1FS1A 1FYZE 2YB5A 2FW3A 3TAEA 4FJMA 1FZ2E 3NDKA 2PFVA 4KHNA 3QESA 1XMGE 1MMOG 2P1NB 3RMCA 4M3TA 3NE6A 2LF3A 3CFRA 4FJIA 3HP9A 4E4BA 2JHPA 4FK2A 3SUPA 4AKIA 4DTPA 2VJ5A 3NHGA 4ADNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MMB A; 
#chains in the Genus database with same CATH topology
 2OZS A;  3C6O B;  4J2E A;  4EYW A;  3KD1 E;  3SPY A;  1XU3 E;  3MKS B;  1FZ1 E;  3NGI A;  4JRQ A;  3SNN A;  2MW2 A;  1IH7 A;  1FZ6 E;  4M45 A;  5IZ7 A;  3UIQ A;  4X5M A;  2K5S A;  1JW2 A;  3SPZ A;  1IG9 A;  3OGK B;  3HGK E;  1FZ8 E;  4AKG A;  3J27 A;  3LD8 A;  3QEX A;  3TAF A;  1XVD E;  3SQ2 A;  3CFP A;  5IBK B;  3QNO A;  4DTJ A;  4FJH A;  1CLQ A;  2E32 A;  4FJJ A;  1NEX B;  4J2A A;  4M42 A;  3SQ4 A;  1MTY G;  1XVB E;  2DTU A;  4E3S A;  3SQ1 A;  4M3Z A;  2FYO A;  3N1E A;  2OVR B;  3L8B A;  3CQ8 A;  4DTN A;  2B8I A;  4B08 A;  4FJ7 A;  5H37 A;  2B7M A;  4KI6 A;  2PFT A;  1XL3 C;  4DTR A;  3QET A;  2P1M B;  3SVI A;  4JS4 A;  3SUN A;  4AI6 A;  2ATQ A;  4M3R A;  4KHU A;  4FK4 A;  2MZW B;  5IRE A;  4KHW A;  2HD0 A;  3TAB A;  4FJG A;  4JRP A;  1FZ5 E;  2DY4 A;  1XVF E;  4HCB A;  2OZM A;  2VJ4 A;  4M3U A;  1FZ7 E;  2VIX A;  4DTS A;  4I9Q A;  3SQ0 A;  4KHY A;  3SI6 A;  4J2B A;  4M3W A;  1FXX A;  4DTX A;  3C6P B;  4DTM A;  4I6J B;  3RMD A;  1FZ3 E;  4HCC A;  1FZ4 E;  2JH8 A;  1FZI E;  4M3Y A;  4AKH A;  1XVC E;  4FJ8 A;  3TL8 B;  3C94 A;  2OVP B;  3RMA A;  2JQT A;  1MHY G;  4M3X A;  1XVG E;  4DU1 A;  3E4W A;  3RMB A;  4KI4 A;  3BVO A;  1XMH E;  2E31 A;  2JHA A;  3L0M A;  4X5N A;  2P5G A;  4FJN A;  2MMB A;  2JPN A;  3C95 A;  3E4Y A;  1FZ9 E;  3LZI A;  4QNC A;  4DTO A;  3J2P A;  1WAJ A;  4DU4 A;  4IT5 A;  2H4T A;  3QEP A;  4FVM A;  3LDS A;  4J2D A;  2JHC A;  2LF6 A;  3C6N B;  3SJJ A;  1Q9Y A;  1P22 A;  4ADO A;  1FZ0 E;  4M41 A;  4RNG A;  2JH9 A;  3S9H A;  3L2O B;  2OVQ B;  3HL8 A;  3SUO A;  2OYQ A;  2DEB A;  3L1N A;  3N1B A;  4FK0 A;  4EPH A;  3SCX A;  3QNN A;  1XU5 E;  4DTU A;  2P1Q B;  4FJK A;  4ICG C;  1MHZ G;  3TAG A;  3TJY A;  4DU3 A;  3QEW A;  1FZH E;  3NAE A;  4FJ9 A;  2P1O B;  2QXF A;  3KD5 E;  4RL5 A;  4FJL A;  1Q9X A;  3QER A;  3SUQ A;  1FPO A;  3CFO A;  4RG8 A;  2RCU A;  3UO3 A;  4FJ5 A;  4FJX A;  4EP9 A;  1LDK E;  4GAM C;  3V7D B;  2P5O A;  4KHS A;  2B1E A;  2P1P B;  4I9L A;  3OGL B;  4KHQ A;  1WAF A;  3HGL A;  3WSO A;  4JS5 A;  3RWU A;  3K2O A;  3OGM B;  4QND A;  3NCI A;  1XMF E;  3LZJ A;  3LDB A;  3QEI A;  3QEV A;  1XVE E;  1FS1 A;  1FYZ E;  2YB5 A;  2FW3 A;  3TAE A;  3UO2 A;  4FJM A;  1FZ2 E;  3NDK A;  2PFV A;  4KHN A;  3QES A;  1XMG E;  1MMO G;  2P1N B;  3RMC A;  4M3T A;  3NE6 A;  2LF3 A;  3CFR A;  4FJI A;  3HP9 A;  1N1C A;  2JHP A;  2RKH A;  4E4B A;  4FK2 A;  3SUP A;  4AKI A;  4DTP A;  2VJ5 A;  3NHG A;  4ADN A; 
#chains in the Genus database with same CATH homology
 2OZS A;  3C6O B;  4J2E A;  4EYW A;  3KD1 E;  3SPY A;  1XU3 E;  3MKS B;  1FZ1 E;  3NGI A;  4JRQ A;  3SNN A;  3UIQ A;  1IH7 A;  1FZ6 E;  4M45 A;  5IZ7 A;  4X5M A;  3SPZ A;  1IG9 A;  3OGK B;  3HGK E;  1FZ8 E;  4AKG A;  3J27 A;  3LD8 A;  3QEX A;  3TAF A;  1XVD E;  3SQ2 A;  3CFP A;  5IBK B;  3QNO A;  4DTJ A;  4FJH A;  1CLQ A;  2E32 A;  4FJJ A;  1NEX B;  4J2A A;  4M42 A;  3SQ4 A;  1MTY G;  1XVB E;  2DTU A;  4E3S A;  3SQ1 A;  4M3Z A;  2FYO A;  3N1E A;  2OVR B;  3L8B A;  3CQ8 A;  4DTN A;  2B8I A;  4B08 A;  4FJ7 A;  5H37 A;  2B7M A;  4KI6 A;  2PFT A;  1XL3 C;  4DTR A;  3QET A;  2P1M B;  3SVI A;  4JS4 A;  3SUN A;  4AI6 A;  2ATQ A;  4M3R A;  4KHU A;  4FK4 A;  2MZW B;  5IRE A;  4KHW A;  2HD0 A;  3TAB A;  4FJG A;  4JRP A;  1FZ5 E;  2DY4 A;  1XVF E;  4HCB A;  2OZM A;  2VJ4 A;  4M3U A;  1FZ7 E;  2VIX A;  4DTS A;  4I9Q A;  3SQ0 A;  4KHY A;  3SI6 A;  4J2B A;  4M3W A;  1FXX A;  4DTX A;  3C6P B;  4DTM A;  4I6J B;  3RMD A;  1FZ3 E;  4HCC A;  1FZ4 E;  2JH8 A;  1FZI E;  4M3Y A;  4AKH A;  1XVC E;  4FJ8 A;  3TL8 B;  3C94 A;  2OVP B;  3RMA A;  1MHY G;  4M3X A;  1XVG E;  4DU1 A;  3E4W A;  3RMB A;  4KI4 A;  1XMH E;  2E31 A;  2JHA A;  3L0M A;  4X5N A;  2P5G A;  4FJN A;  2MMB A;  2JPN A;  3C95 A;  3E4Y A;  1FZ9 E;  3LZI A;  4QNC A;  4DTO A;  3J2P A;  1WAJ A;  4DU4 A;  2H4T A;  3QEP A;  4FVM A;  3LDS A;  4J2D A;  2JHC A;  2LF6 A;  3C6N B;  3SJJ A;  1Q9Y A;  1P22 A;  4ADO A;  1FZ0 E;  4M41 A;  4RNG A;  2JH9 A;  3S9H A;  3L2O B;  2OVQ B;  3HL8 A;  3SUO A;  2OYQ A;  2DEB A;  3L1N A;  3N1B A;  4FK0 A;  4EPH A;  3SCX A;  3QNN A;  1XU5 E;  4DTU A;  2P1Q B;  4FJK A;  1MHZ G;  3TAG A;  3TJY A;  4DU3 A;  3QEW A;  1FZH E;  3NAE A;  4FJ9 A;  2P1O B;  2QXF A;  3KD5 E;  4RL5 A;  4FJL A;  1Q9X A;  3QER A;  3SUQ A;  3CFO A;  4RG8 A;  2RCU A;  4FJX A;  4FJ5 A;  4EP9 A;  1LDK E;  4GAM C;  3V7D B;  2P5O A;  4KHS A;  2B1E A;  2P1P B;  4I9L A;  3OGL B;  4KHQ A;  1WAF A;  3HGL A;  3WSO A;  4JS5 A;  3RWU A;  3K2O A;  3OGM B;  4QND A;  3NCI A;  1XMF E;  3LZJ A;  3LDB A;  3QEI A;  3QEV A;  1XVE E;  1FS1 A;  1FYZ E;  2YB5 A;  2FW3 A;  3TAE A;  4FJM A;  1FZ2 E;  3NDK A;  2PFV A;  4KHN A;  3QES A;  1XMG E;  1MMO G;  2P1N B;  3RMC A;  4M3T A;  3NE6 A;  2LF3 A;  3CFR A;  4FJI A;  3HP9 A;  4E4B A;  2JHP A;  4FK2 A;  3SUP A;  4AKI A;  4DTP A;  2VJ5 A;  3NHG A;  4ADN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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