2N1UA

Structure of sap30l corepressor protein
Total Genus 17
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
17
sequence length
70
structure length
70
Chain Sequence
GSYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKSVRHLYICDFHKNFIQSVRNKRKRKT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Protein binding
molecule keywords Histone deacetylase complex subunit SAP30L
publication title Redox-dependent disulfide bond formation in SAP30L corepressor protein: Implications for structure and function.
pubmed doi rcsb
source organism Homo sapiens
total genus 17
structure length 70
sequence length 70
ec nomenclature
pdb deposition date 2015-04-23
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1800.30 Alpha Beta 3-Layer(aba) Sandwich His-Me finger endonuclease fold His-Me finger endonuclease fold 2n1uA00
2KDPA 2N1UA
chains in the Genus database with same CATH superfamily
2QNFA 3FC3A 1EN7A 2QNCA 1E7DA 1PZWA 3GOXA 2KDPA 1E7LA 2N1UA
chains in the Genus database with same CATH topology
1PZWA 2KDPA 2N1UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2KDP A;  2N1U A; 
#chains in the Genus database with same CATH topology
 2QNF A;  3FC3 A;  1EN7 A;  2QNC A;  1E7D A;  1PZW A;  3GOX A;  2KDP A;  1E7L A;  2N1U A; 
#chains in the Genus database with same CATH homology
 1PZW A;  2KDP A;  2N1U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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