2N2MA

Nmr structure of yersinia pestis ail (attachment invasion locus) in decylphosphocholine micelles
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
156
structure length
156
Chain Sequence
EGESSISIGYAQSRVKEDGYKLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVDGFKLIDGDFKYYSVTAGPVFRINEYVSLYGLLGAGHGKAKFSSIFGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDDVKVGTWMLGAGYRF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Membrane protein
molecule keywords Outer membrane protein X
publication title Backbone structure of Yersinia pestis Ail determined in micelles by NMR-restrained simulated annealing with implicit membrane solvation.
pubmed doi rcsb
source organism Yersinia pestis
total genus 22
structure length 156
sequence length 156
ec nomenclature
pdb deposition date 2015-05-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.160.20 Mainly Beta Beta Barrel Porin Porin 2n2mA00
2GE4A 1P4TA 2LHFA 1G90A 2M07A 2ERVA 2M06A 2JMMA 3GP6A 1QJ9A 2MNHA 2F1VA 1BXWA 3G7GA 1Q9GA 3C5OA 2K0LA 1QJPA 1MM4A 3QRAA 1Q9FA 2N2LA 1QJ8A 4PUXA 2X27X 4RLCA 1THQA 2N2MA 1ORMA 2F1TA 1MM5A 3QRCA 2MHLA
chains in the Genus database with same CATH superfamily
2GE4A 3BRYA 2XE3A 3JTYA 4U9CA 2LHFA 3SY7A 5ADXK 1IZNB 3SYSA 2J1NA 3UU2A 5JDPA 4O3ZA 2IWVA 2XG6A 2ERVA 2K4TA 4FSOA 2M06A 4LSIA 2YPVA 5T5FA 5E79O 1PHOA 2O4VA 2XE2A 3GP6A 1QJ9A 4CTDA 1T1LA 3HOEA 3PGSA 1ZHZA 4D65A 4D5UA 3AA6B 3EMNX 5KAIO 2KDYA 4AUIA 4AYDC 3C5OA 4E1SA 2K0LA 4Z3TA 8PRNA 5GTHO 3NSGA 3PGUA 2WJQA 3VY8X 3T20A 5GTIO 3SY9A 4FOZA 2ZLDA 3T0SA 4GCQA 1THQA 2KXPB 3HOLA 2N2MA 3DA3A 4FRXA 4AYMC 3UAQA 3AA0B 2PRNA 3HW9A 5KAFO 4KR8A 3RBHA 2KC0A 2R4NA 2KZ7B 3O0EA 4GF4A 2YNKA 4RJWA 4K3CA 5B5EO 3AA6A 5IYUA 3PQUA 4O3WA 3PORA 1YS5A 2OMFA 4GHBA 3DWNA 3AA7B 4K3BA 3K19A 4N59A 4RLBA 5G3AA 2FGRA 2PORA 3BRZA 2JMMA 2XMXA 3VZUX 4C4VB 1E54A 1ZHYA 2KXPA 4N58A 5AFUL 1Q9GA 2R4LA 3LK2B 3AA0A 4FUVA 1QJPA 5PRNA 3POUA 2KZ7A 4GCSA 3VZTX 4C00A 3QRAA 2Y0LA 4N74A 4FSPA 4LSHA 1GFMA 2X27X 3A0HO 4IL6O 5ADXL 2IWWA 2R8AA 3AAAB 4O49A 3AA7A 4KRAA 1ZHXA 1HXTA 5DL8A 5B66O 4XNLA 1MM5A 4FESA 4C4VA 3UPGA 2W81C 1PRNA 4QQ1A 4O3XB 5G26A 1ZHWA 2AXTO 2WVPA 3HWBA 4XNKA 4AZLA 4BUMX 3AA1B 5G39A 1G90A 3JCUO 2Y0HA 3LK2A 4G75A 3VE2A 3WU2O 4AKRB 4PJ0O 2R4OA 4FQEA 3V8UA 2XTRA 4O3YA 3AAEB 4AYID 3SZDA 5GV0A 4FMSA 4FT6A 1GFPA 4GCPA 1BXWA 2LFUA 4KR4A 4C69X 6PRNA 4JFBA 3AAAA 2ODJA 3BS0A 4FRTA 2XE1A 4LSFA 1MM4A 3DWOX 4FZLA 5EE2A 4RL9A 4AYEC 1HXXA 2R4PA 3PQSA 4G76A 4LSEA 3AA1A 5DL7A 1BT9A 4RLCA 5TISO 3KVDD 1BH3A 2Y0KA 4AKRA 2W80C 5DL6A 4AYNA 2F1TA 4E1TA 3PRNA 3TZGA 3AAEA 1GFNA 3LK42 3T24A 2XE5A 3KZIO 2F1CX 1P4TA 4RJXA 4JCHA 2Y2XA 3A0BO 3LK41 2JQYA 3FYXA 3VZWX 2M07A 4O4XA 1HXUA 3POQA 4UB6O 3DA4A 1S5LO 1OPFA 5H2FO 3NJTA 5G38A 2MNHA 2XTQA 2F1VA 2ZFGA 4N75A 2X9KA 4F4BA 7PRNA 2R89A 3G7GA 4FZMA 2Y7SA 1GFQA 3POXA 1MPFA 1GFOA 3LK3A 4FZNA 4PR7A 4AKMA 1OSMA 3VE1A 3WI4A 1Q9FA 2QTKA 1IZNA 1QJ8A 2N2LA 1T16A 3DZMA 4PUXA 3VY9X 1ZHTA 5AFUK 4O4UA 5FVNA 4AFKA 3PF1A 2FGQX 1ORMA 4UB8O 3SZVA 3WI5A 4B61A 2J4UP 5DL5A 2WJRA 3SYBA 5D5DA 1H6S1 3A2SX 2R88A 3PGRA 2MHLA 3QRCA 3LK3B 4D64A
chains in the Genus database with same CATH topology
2GE4A 3JTYA 2XE3A 4U9CA 2LHFA 3SY7A 5ADXK 1IZNB 3SYSA 2J1NA 3UU2A 5JDPA 4O3ZA 2XG6A 2ERVA 2K4TA 4FSOA 2M06A 4LSIA 2YPVA 5T5FA 1PHOA 2O4VA 2XE2A 3GP6A 1QJ9A 3HOEA 1ZHZA 4D65A 4D5UA 3AA6B 3EMNX 4Z3TA 2KDYA 4AUIA 4AYDC 3C5OA 4E1SA 2K0LA 8PRNA 3NSGA 3VY8X 3T20A 3SY9A 4FOZA 2ZLDA 3T0SA 4GCQA 1THQA 2KXPB 3HOLA 2N2MA 3DA3A 4FRXA 4AYMC 3UAQA 3AA0B 2PRNA 3HW9A 4KR8A 3RBHA 2KC0A 2KZ7B 3O0EA 4GF4A 4RJWA 2YNKA 3AA6A 5IYUA 3PQUA 4O3WA 3PORA 1YS5A 2OMFA 4GHBA 3AA7B 4N59A 3K19A 4RLBA 2FGRA 2PORA 2JMMA 2XMXA 3VZUX 1E54A 1ZHYA 2KXPA 4N58A 5AFUL 1Q9GA 3LK2B 3AA0A 4FUVA 1QJPA 5PRNA 3POUA 2KZ7A 4GCSA 3VZTX 3QRAA 2Y0LA 4FSPA 4LSHA 1GFMA 2X27X 5ADXL 3AAAB 4O49A 3AA7A 4KRAA 1ZHXA 1HXTA 5DL8A 4XNLA 1MM5A 4FESA 3UPGA 2W81C 1PRNA 4QQ1A 4O3XB 5G26A 1ZHWA 3HWBA 4XNKA 4AZLA 4BUMX 3AA1B 1G90A 3VE2A 2Y0HA 3LK2A 4G75A 4AKRB 3V8UA 2XTRA 4O3YA 3AAEB 4AYID 3SZDA 5GV0A 4FMSA 4FT6A 1GFPA 4GCPA 1BXWA 2LFUA 4KR4A 4C69X 6PRNA 4JFBA 3AAAA 2ODJA 4FRTA 2XE1A 4LSFA 1MM4A 4FZLA 5EE2A 4RL9A 4AYEC 1HXXA 3PQSA 4G76A 4LSEA 3AA1A 5DL7A 1BT9A 4RLCA 3KVDD 1BH3A 2Y0KA 4AKRA 2W80C 5DL6A 4AYNA 2F1TA 4E1TA 3PRNA 3TZGA 3AAEA 1GFNA 3LK42 3T24A 2XE5A 1P4TA 4RJXA 4JCHA 2Y2XA 3LK41 3FYXA 3VZWX 2M07A 4O4XA 1HXUA 3POQA 3DA4A 1OPFA 2MNHA 2XTQA 2F1VA 2ZFGA 7PRNA 4F4BA 3G7GA 4FZMA 2Y7SA 1GFQA 3POXA 1MPFA 1GFOA 3LK3A 4FZNA 4AKMA 1OSMA 3VE1A 3WI4A 1Q9FA 2QTKA 1IZNA 1QJ8A 2N2LA 4PUXA 3VY9X 1ZHTA 5AFUK 4O4UA 5FVNA 4AFKA 2FGQX 1ORMA 3SZVA 3WI5A 4B61A 2J4UP 5DL5A 3SYBA 5D5DA 1H6S1 3A2SX 3QRCA 2MHLA 3LK3B 4D64A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GE4 A;  1P4T A;  2LHF A;  1G90 A;  2M07 A;  2ERV A;  2M06 A;  2JMM A;  3GP6 A;  1QJ9 A;  2MNH A;  2F1V A;  1BXW A;  3G7G A;  1Q9G A;  3C5O A;  2K0L A;  1QJP A;  1MM4 A;  3QRA A;  1Q9F A;  2N2L A;  1QJ8 A;  4PUX A;  2X27 X;  4RLC A;  1THQ A;  2N2M A;  1ORM A;  2F1T A;  1MM5 A;  3QRC A;  2MHL A; 
#chains in the Genus database with same CATH topology
 2GE4 A;  3BRY A;  2XE3 A;  3JTY A;  4U9C A;  2LHF A;  3SY7 A;  5ADX K;  1IZN B;  3SYS A;  2J1N A;  3UU2 A;  5JDP A;  4O3Z A;  2IWV A;  2XG6 A;  2ERV A;  2K4T A;  4FSO A;  2M06 A;  4LSI A;  2YPV A;  5T5F A;  5E79 O;  1PHO A;  2O4V A;  2XE2 A;  3GP6 A;  1QJ9 A;  4CTD A;  1T1L A;  3HOE A;  3PGS A;  1ZHZ A;  4D65 A;  4D5U A;  3AA6 B;  3EMN X;  5KAI O;  2KDY A;  4AUI A;  4AYD C;  3C5O A;  4E1S A;  2K0L A;  4Z3T A;  8PRN A;  5GTH O;  3NSG A;  3PGU A;  2WJQ A;  3VY8 X;  3T20 A;  5GTI O;  3SY9 A;  4FOZ A;  2ZLD A;  3T0S A;  4GCQ A;  1THQ A;  2KXP B;  3HOL A;  2N2M A;  3DA3 A;  4FRX A;  4AYM C;  3UAQ A;  3AA0 B;  2PRN A;  3HW9 A;  5KAF O;  4KR8 A;  3RBH A;  2KC0 A;  2R4N A;  2KZ7 B;  3O0E A;  4GF4 A;  2YNK A;  4RJW A;  4K3C A;  5B5E O;  3AA6 A;  5IYU A;  3PQU A;  4O3W A;  3POR A;  1YS5 A;  2OMF A;  4GHB A;  3DWN A;  3AA7 B;  4K3B A;  3K19 A;  4N59 A;  4RLB A;  5G3A A;  2FGR A;  2POR A;  3BRZ A;  2JMM A;  2XMX A;  3VZU X;  4C4V B;  1E54 A;  1ZHY A;  2KXP A;  4N58 A;  5AFU L;  1Q9G A;  2R4L A;  3LK2 B;  3AA0 A;  4FUV A;  1QJP A;  5PRN A;  3POU A;  2KZ7 A;  4GCS A;  3VZT X;  4C00 A;  3QRA A;  2Y0L A;  4N74 A;  4FSP A;  4LSH A;  1GFM A;  2X27 X;  3A0H O;  4IL6 O;  5ADX L;  2IWW A;  2R8A A;  3AAA B;  4O49 A;  3AA7 A;  4KRA A;  1ZHX A;  1HXT A;  5DL8 A;  5B66 O;  4XNL A;  1MM5 A;  4FES A;  4C4V A;  3UPG A;  2W81 C;  1PRN A;  4QQ1 A;  4O3X B;  5G26 A;  1ZHW A;  2AXT O;  2WVP A;  3HWB A;  4XNK A;  4AZL A;  4BUM X;  3AA1 B;  5G39 A;  1G90 A;  3JCU O;  2Y0H A;  3LK2 A;  4G75 A;  3VE2 A;  3WU2 O;  4AKR B;  4PJ0 O;  2R4O A;  4FQE A;  3V8U A;  2XTR A;  4O3Y A;  3AAE B;  4AYI D;  3SZD A;  5GV0 A;  4FMS A;  4FT6 A;  1GFP A;  4GCP A;  1BXW A;  2LFU A;  4KR4 A;  4C69 X;  6PRN A;  4JFB A;  3AAA A;  2ODJ A;  3BS0 A;  4FRT A;  2XE1 A;  4LSF A;  1MM4 A;  3DWO X;  4FZL A;  5EE2 A;  4RL9 A;  4AYE C;  1HXX A;  2R4P A;  3PQS A;  4G76 A;  4LSE A;  3AA1 A;  5DL7 A;  1BT9 A;  4RLC A;  5TIS O;  3KVD D;  1BH3 A;  2Y0K A;  4AKR A;  2W80 C;  5DL6 A;  4AYN A;  2F1T A;  4E1T A;  3PRN A;  3TZG A;  3AAE A;  1GFN A;  3LK4 2;  3T24 A;  2XE5 A;  3KZI O;  2F1C X;  1P4T A;  4RJX A;  4JCH A;  2Y2X A;  3A0B O;  3LK4 1;  2JQY A;  3FYX A;  3VZW X;  2M07 A;  4O4X A;  1HXU A;  3POQ A;  4UB6 O;  3DA4 A;  1S5L O;  1OPF A;  5H2F O;  3NJT A;  5G38 A;  2MNH A;  2XTQ A;  2F1V A;  2ZFG A;  4N75 A;  2X9K A;  4F4B A;  7PRN A;  2R89 A;  3G7G A;  4FZM A;  2Y7S A;  1GFQ A;  3POX A;  1MPF A;  1GFO A;  3LK3 A;  4FZN A;  4PR7 A;  4AKM A;  1OSM A;  3VE1 A;  3WI4 A;  1Q9F A;  2QTK A;  1IZN A;  1QJ8 A;  2N2L A;  1T16 A;  3DZM A;  4PUX A;  3VY9 X;  1ZHT A;  5AFU K;  4O4U A;  5FVN A;  4AFK A;  3PF1 A;  2FGQ X;  1ORM A;  4UB8 O;  3SZV A;  3WI5 A;  4B61 A;  2J4U P;  5DL5 A;  2WJR A;  3SYB A;  5D5D A;  1H6S 1;  3A2S X;  2R88 A;  3PGR A;  2MHL A;  3QRC A;  3LK3 B;  4D64 A; 
#chains in the Genus database with same CATH homology
 2GE4 A;  3JTY A;  2XE3 A;  4U9C A;  2LHF A;  3SY7 A;  5ADX K;  1IZN B;  3SYS A;  2J1N A;  3UU2 A;  5JDP A;  4O3Z A;  2XG6 A;  2ERV A;  2K4T A;  4FSO A;  2M06 A;  4LSI A;  2YPV A;  5T5F A;  1PHO A;  2O4V A;  2XE2 A;  3GP6 A;  1QJ9 A;  3HOE A;  1ZHZ A;  4D65 A;  4D5U A;  3AA6 B;  3EMN X;  4Z3T A;  2KDY A;  4AUI A;  4AYD C;  3C5O A;  4E1S A;  2K0L A;  8PRN A;  3NSG A;  3VY8 X;  3T20 A;  3SY9 A;  4FOZ A;  2ZLD A;  3T0S A;  4GCQ A;  1THQ A;  2KXP B;  3HOL A;  2N2M A;  3DA3 A;  4FRX A;  4AYM C;  3UAQ A;  3AA0 B;  2PRN A;  3HW9 A;  4KR8 A;  3RBH A;  2KC0 A;  2KZ7 B;  3O0E A;  4GF4 A;  4RJW A;  2YNK A;  3AA6 A;  5IYU A;  3PQU A;  4O3W A;  3POR A;  1YS5 A;  2OMF A;  4GHB A;  3AA7 B;  4N59 A;  3K19 A;  4RLB A;  2FGR A;  2POR A;  2JMM A;  2XMX A;  3VZU X;  1E54 A;  1ZHY A;  2KXP A;  4N58 A;  5AFU L;  1Q9G A;  3LK2 B;  3AA0 A;  4FUV A;  1QJP A;  5PRN A;  3POU A;  2KZ7 A;  4GCS A;  3VZT X;  3QRA A;  2Y0L A;  4FSP A;  4LSH A;  1GFM A;  2X27 X;  5ADX L;  3AAA B;  4O49 A;  3AA7 A;  4KRA A;  1ZHX A;  1HXT A;  5DL8 A;  4XNL A;  1MM5 A;  4FES A;  3UPG A;  2W81 C;  1PRN A;  4QQ1 A;  4O3X B;  5G26 A;  1ZHW A;  3HWB A;  4XNK A;  4AZL A;  4BUM X;  3AA1 B;  1G90 A;  3VE2 A;  2Y0H A;  3LK2 A;  4G75 A;  4AKR B;  3V8U A;  2XTR A;  4O3Y A;  3AAE B;  4AYI D;  3SZD A;  5GV0 A;  4FMS A;  4FT6 A;  1GFP A;  4GCP A;  1BXW A;  2LFU A;  4KR4 A;  4C69 X;  6PRN A;  4JFB A;  3AAA A;  2ODJ A;  4FRT A;  2XE1 A;  4LSF A;  1MM4 A;  4FZL A;  5EE2 A;  4RL9 A;  4AYE C;  1HXX A;  3PQS A;  4G76 A;  4LSE A;  3AA1 A;  5DL7 A;  1BT9 A;  4RLC A;  3KVD D;  1BH3 A;  2Y0K A;  4AKR A;  2W80 C;  5DL6 A;  4AYN A;  2F1T A;  4E1T A;  3PRN A;  3TZG A;  3AAE A;  1GFN A;  3LK4 2;  3T24 A;  2XE5 A;  1P4T A;  4RJX A;  4JCH A;  2Y2X A;  3LK4 1;  3FYX A;  3VZW X;  2M07 A;  4O4X A;  1HXU A;  3POQ A;  3DA4 A;  1OPF A;  2MNH A;  2XTQ A;  2F1V A;  2ZFG A;  7PRN A;  4F4B A;  3G7G A;  4FZM A;  2Y7S A;  1GFQ A;  3POX A;  1MPF A;  1GFO A;  3LK3 A;  4FZN A;  4AKM A;  1OSM A;  3VE1 A;  3WI4 A;  1Q9F A;  2QTK A;  1IZN A;  1QJ8 A;  2N2L A;  4PUX A;  3VY9 X;  1ZHT A;  5AFU K;  4O4U A;  5FVN A;  4AFK A;  2FGQ X;  1ORM A;  3SZV A;  3WI5 A;  4B61 A;  2J4U P;  5DL5 A;  3SYB A;  5D5D A;  1H6S 1;  3A2S X;  3QRC A;  2MHL A;  3LK3 B;  4D64 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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