2NMUA

Crystal structure of the hypothetical protein from salmonella typhimurium lt2. northeast structural genomics consortium target str127.
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
137
structure length
137
Chain Sequence
HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSRL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Dna binding protein
source organism Salmonella typhimurium
publication title Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
rcsb
molecule keywords Putative DNA-binding protein
total genus 30
structure length 137
sequence length 137
ec nomenclature
pdb deposition date 2006-10-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03479 DUF296 Plants and Prokaryotes Conserved (PCC) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.80 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 2nmuA01
4BT5A 4BT4A 4BT6A 2NMUA 1XV2A 3HWUA 2H6LA 2HX0A 4BT2A 4BT7A 2DT4A 2P6YA 3HTNA 4BT3A
chains in the Genus database with same CATH superfamily
3RYHB 1VQLF 1TUBA 3JAKA 1RLGA 3CC4F 5JH7B 3U0OA 2Z1FA 1W40A 4I4TA 5AVMA 1JD1A 5LA6B 2AIFA 2GLZA 4BW0B 2CW4A 1JFFA 1GZ0A 1W5AA 4M8IA 4BT2A 4ZI7A 4O4IA 3MDOA 5JQGA 5BMVA 3LFOA 5EWRA 1TVKB 3VMFB 4G4XA 3JALA 3RA6A 3VYTC 2VXYA 4C8EA 3SIUA 4U39A 2HP0B 3F0FA 5HXZA 5CB4B 3CYPB 3TD5A 4ZHQB 5IYZB 2RHJA 4G4VA 2CWJA 1H7MA 2VAMA 2Z1UA 5HY2A 1Q8RA 2VAWA 3JARA 1VQ5F 3HKBA 3KE1A 4R40B 1W5FA 4LCKA 4NUTA 3D00A 3E20B 2B33A 4O2BA 4BT5A 3VTIC 3HKDA 2RB9A 3T80A 2KTUA 1VQ8F 2OTMA 3C8LA 3JATB 3LWQC 1IV2A 4ZHWA 5C8YB 3G4SF 3DC2A 5FNVA 1SDSA 3RYCA 1FNKA 5EZYB 2LBTA 5LP6A 4LNUA 1YIJF 3RA5A 3WPXA 1FNJA 2ZF8A 3JAWA 1QD9A 3ZOPA 1W55A 4DRXA 5HWEA 3GTZA 1U3LA 5IJ9B 3C9SA 3F0EA 2PHNA 5KX5A 4YJ2B 1VQOF 1K8AH 2UYNB 1UI9A 3CB2A 1PF5A 1W57A 1FFXB 5KMGA 3VO8A 4O4JB 2BO1A 2MQEA 3WPWA 2UYKA 2Z01A 1R1MA 4X3MA 3P10A 1QAHA 1ZWZA 3OW2F 3C9TA 3KIZA 4O2AA 5A2QM 4G4ZA 5EYPA 4NWOB 4TV9B 4U3JB 1SA0A 3MBMA 5LOVB 1VK3A 2RHHA 3I7TA 4X3LA 3CCSF 1X25A 2Q1XA 2HP3A 3IKEA 5EAZA 5J2TB 3WJQA 1N8RH 5J2UB 3UT5B 1W5BA 1W59A 3WJRA 4KWEA 3HTNA 3LWVC 4BVTA 4I55A 4FFBA 3CPQA 1YJ9F 3ESJA 3RYHA 1QVGF 1W41A 3CCRF 2KG4A 1K9MH 1PXWA 3N4YA 5JH7A 3JVHA 5MN5A 5HY1A 5LXTB 3OBYA 4DXDA 5LA6A 5LP6C 3NVKE 3QTYA 1E7KA 3S0WA 4X1KB 3HKCB 1W3EX 4C81A 2HQSC 3CYQA 3ZO8A 3KJJA 2CSLA 1JJ2F 3S03A 2HS3A 3N2GB 2HP0A 5HY4A 4WBNB 2HRYA 5CB4A 3S0HA 2V9YA 4ZHQA 3PAFA 2YYEA 5IYZA 3VOAA 2BTOA 3P4EA 4G4YA 3CC2F 1KNKA 1Z5WA 3V4DA 5JCOA 1S72F 3WGKA 4BT3A 4BVSA 1M1KH 2LBXA 2BTQB 4EI7A 3IEWA 4ZK7A 1J7HA 3NK6A 1ODEA 2AMTA 4ZHVA 1VQ9F 2GZLA 4ZHYB 3JATA 3D01A 3WGLA 5C8YA 3CMAF 4BT6A 4IIJB 1X7PA 1NMUB 3FFMA 1KD1H 3S0YA 5EZYA 4NQ3A 5JVDB 5EB0A 2HVYD 3G6EF 3CCMF 3MQWA 3CMEF 2QA4F 3CG6A 1OAPA 3AGKA 1VQMF 1YQNA 2QEXF 1XV2A 3LYBA 4IHJB 5IJ9A 3C9RA 2ZVYA 4O4HB 1H48A 1T0AA 4YJ2A 5GONA 2UYNA 5CA1B 1JN1A 2NMUA 2HRUA 4YJ3B 4HNAA 2LBWA 4EI8A 5G4UC 1FFXA 3OONA 5LYJB 1Q81H 4O4JA 3VYSC 4C8GA 3K2XA 1DBFA 3S06A 3K12A 4C4WC 3JASB 4X1IB 4X1YB 3P0ZA 4EB6B 3J80M 3VYUC 1KNJA 3IEQA 1XHOA 3PLAC 2W8BC 1Q82H 1XRGA 4TV9A 5GONB 4TUYB 4U3JA 2L26A 5LOVA 3I56F 3M1XA 2UZHA 3LWOC 1YITF 5DCVA 1T0KB 4PWTA 3NMUC 4HNAB 5HY0A 3HJWC 5J2TA 5J2UA 3UT5A 3KHNA 4I50B 3ERNA 3FD6A 2EWCA 3CC7F 3J7AR 4BT4A 1U3PA 5GANK 2AIZP 3LMEA 2CHSA 2QTPA 2RHLA 1VQ7F 1VHAA 2H8EA 4BVQA 5LXTA 3QHDA 1IPAA 3ZP7A 1GO1A 3HWUA 2RHOA 3LWPC 1YGYA 2HS4A 4F6RB 5EO3A 5EIBD 1OFUA 3HKCA 4X1KA 3NVIB 3RE3A 1COMA 3C9UA 3S02A 1DT9A 2GVIA 4X20B 1IV1A 1KQSF 1U43A 2R6R1 3HKEB 3V7EA 3G71F 3SIVA 5ITZB 3N2GA 1IV3A 4WBNA 3N2KB 3O85A 2ZAUA 1U40A 3CCQF 3B6NA 3CCUF 2OTJF 3IKFA 1FSZA 1UFYA 2I6DA 3ZP4A 3FPIA 5FLXM 3CXCF 1CK2A 2KTVA 3IR9A 1KC8H 1VQVA 5EIBC 3WGNA 4ZOLB 4O4LB 2IQQA 2P6YA 3FBAA 3GYQA 2QI2A 2HS0A 3RYFB 4IIJA 1VQPF 2G9IA 3CCLF 5HXUA 2UYJA 4E6EA 5JVDA 1X52A 5HP8A 2R751 2KGWA 1X7OA 3WGMA 3V7QA 3LWRC 3I55F 2OHWA 3DDNA 5IJ0B 4IHJA 1NJIH 2YXZA 1YHQF 1H47A 1YI2F 4O4HA 3NK7A 1VQ4F 2OZBA 5G4VC 1ONIA 5CA1A 1QU9A 3E1YA 4C82A 2OTLF 5CA0B 3E22B 2PMPA 4YJ3A 4B5CA 3RYIB 3K14A 5LYJA 1Q7YH 3KJKA 3M84A 2DT4A 3VCZA 3VOBA 3D54A 3JASA 1TUBB 3JAKB 5IT9M 3WXMB 4B46A 4X1YA 3GHZA 4X1IA 1W2BF 4EB6A 1XBIA 2CVLA 2F9ZC 3MCAB 4I4TB 2VAPA 4TV8A 3CPWF 4BY9D 1JY8A 2ZVZA 2CHTA 1JFFB 2JNBA 4TUYA 5GIOC 4ZI7B 4O4IB 1RA4A 5GIPC 2IAFA 2Q1YA 1Q86H 5JQGB 5BMVB 4RQOA 2FGYA 1GO0A 3JALB 4B62A 4RHAA 1K73H 4I50A 5B8FA 2DYYA 2I6RA 3I3FA 4TV8B 3L7QA 3N4ZA 3CCEF 3CCJF 3M4SA 1VQNF 3JAMM 3R0PA 1W5EA 3K0TA 1CLIA 3JARB 5JCOC 2VGMA 1YJWF 2FC3A 4XCQA 3HKBB 1CN7A 1W581 3V3TA 4F6RA 3VIUA 2Z1TA 3FD5A 4O2BB 4EI9A 3HKDB 1Z5VA 2K1SA 2Z1EA 2LCAA 5MN6A 3LDTA 4X20A 3F0GA 3HKEA 3WJPA 1QVFF 3F0DA 3CD6F 5ITZA 1VH8A 5FNVB 3RYCB 4B45A 1GX1A 1W42A 2UYPA 3N2KA 3Q8HA 1NQ3A 1RLUA 5LP6B 4LNUB 3HAXD 3CCVF 3JAWB 3F6MA 4DRXB 5HP7A 2IG8A 4G88A 3ON1A 5KX5B 3OBWA 4ERHA 3WGJA 3JCMM 4TZZA 4ZOLA 4O4LA 5KMGB 1VQ6F 3RYFA 1YJNF 1M90H 2ZODA 2N48A 1RQ2A 2BTUA 1RQ7A 2ALEA 4O2AB 2WALA 3ELCA 5EYPB 5FJ4C 5GINC 2VGNA 1SA0B 3TD4A 3VI6A 2H6LA 2HX0A 4BT7A 5IJ0A 4G4WA 2CZWA 3IMPA 3J81M 5MN4A 4BVRA 5GAPK 5CA0A 3E22A 4C8IA 3QUWA 4I55B 2ZOVA 2H8CA 3EORA 4FFBB 5EB1B 1TVKA 1SZQA 3RYIA 3BYQA 3MCQA 1IV4A 3TD3A 1VQKF
chains in the Genus database with same CATH topology
4BT5A 4BT4A 4BT6A 2NMUA 1XV2A 3HWUA 2H6LA 2HX0A 4BT2A 4BT7A 2DT4A 2P6YA 3HTNA 4BT3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4BT5 A;  4BT4 A;  4BT6 A;  2NMU A;  1XV2 A;  3HWU A;  2H6L A;  2HX0 A;  4BT2 A;  4BT7 A;  2DT4 A;  2P6Y A;  3HTN A;  4BT3 A; 
#chains in the Genus database with same CATH topology
 3RYH B;  1VQL F;  1TUB A;  3JAK A;  1RLG A;  3CC4 F;  5JH7 B;  3U0O A;  2Z1F A;  1W40 A;  4I4T A;  5AVM A;  1JD1 A;  5LA6 B;  2AIF A;  2GLZ A;  4BW0 B;  2CW4 A;  1JFF A;  1GZ0 A;  1W5A A;  4M8I A;  4BT2 A;  4ZI7 A;  4O4I A;  3MDO A;  5JQG A;  5BMV A;  3LFO A;  5EWR A;  1TVK B;  3VMF B;  4G4X A;  3JAL A;  3RA6 A;  3VYT C;  2VXY A;  4C8E A;  3SIU A;  4U39 A;  2HP0 B;  3F0F A;  5HXZ A;  5CB4 B;  3CYP B;  3TD5 A;  4ZHQ B;  5IYZ B;  2RHJ A;  4G4V A;  2CWJ A;  1H7M A;  2VAM A;  2Z1U A;  5HY2 A;  1Q8R A;  2VAW A;  3JAR A;  1VQ5 F;  3HKB A;  3KE1 A;  4R40 B;  1W5F A;  4LCK A;  4NUT A;  3D00 A;  3E20 B;  2B33 A;  4O2B A;  4BT5 A;  3VTI C;  3HKD A;  2RB9 A;  3T80 A;  2KTU A;  1VQ8 F;  2OTM A;  3C8L A;  3JAT B;  3LWQ C;  1IV2 A;  4ZHW A;  5C8Y B;  3G4S F;  3DC2 A;  5FNV A;  1SDS A;  3RYC A;  1FNK A;  5EZY B;  2LBT A;  5LP6 A;  4LNU A;  1YIJ F;  3RA5 A;  3WPX A;  1FNJ A;  2ZF8 A;  3JAW A;  1QD9 A;  3ZOP A;  1W55 A;  4DRX A;  5HWE A;  3GTZ A;  1U3L A;  5IJ9 B;  3C9S A;  3F0E A;  2PHN A;  5KX5 A;  4YJ2 B;  1VQO F;  1K8A H;  2UYN B;  1UI9 A;  3CB2 A;  1PF5 A;  1W57 A;  1FFX B;  5KMG A;  3VO8 A;  4O4J B;  2BO1 A;  2MQE A;  3WPW A;  2UYK A;  2Z01 A;  1R1M A;  4X3M A;  3P10 A;  1QAH A;  1ZWZ A;  3OW2 F;  3C9T A;  3KIZ A;  4O2A A;  5A2Q M;  4G4Z A;  5EYP A;  4NWO B;  4TV9 B;  4U3J B;  1SA0 A;  3MBM A;  5LOV B;  1VK3 A;  2RHH A;  3I7T A;  4X3L A;  3CCS F;  1X25 A;  2Q1X A;  2HP3 A;  3IKE A;  5EAZ A;  5J2T B;  3WJQ A;  1N8R H;  5J2U B;  3UT5 B;  1W5B A;  1W59 A;  3WJR A;  4KWE A;  3HTN A;  3LWV C;  4BVT A;  4I55 A;  4FFB A;  3CPQ A;  1YJ9 F;  3ESJ A;  3RYH A;  1QVG F;  1W41 A;  3CCR F;  2KG4 A;  1K9M H;  1PXW A;  3N4Y A;  5JH7 A;  3JVH A;  5MN5 A;  5HY1 A;  5LXT B;  3OBY A;  4DXD A;  5LA6 A;  5LP6 C;  3NVK E;  3QTY A;  1E7K A;  3S0W A;  4X1K B;  3HKC B;  1W3E X;  4C81 A;  2HQS C;  3CYQ A;  3ZO8 A;  3KJJ A;  2CSL A;  1JJ2 F;  3S03 A;  2HS3 A;  3N2G B;  2HP0 A;  5HY4 A;  4WBN B;  2HRY A;  5CB4 A;  3S0H A;  2V9Y A;  4ZHQ A;  3PAF A;  2YYE A;  5IYZ A;  3VOA A;  2BTO A;  3P4E A;  4G4Y A;  3CC2 F;  1KNK A;  1Z5W A;  3V4D A;  5JCO A;  1S72 F;  3WGK A;  4BT3 A;  4BVS A;  1M1K H;  2LBX A;  2BTQ B;  4EI7 A;  3IEW A;  4ZK7 A;  1J7H A;  3NK6 A;  1ODE A;  2AMT A;  4ZHV A;  1VQ9 F;  2GZL A;  4ZHY B;  3JAT A;  3D01 A;  3WGL A;  5C8Y A;  3CMA F;  4BT6 A;  4IIJ B;  1X7P A;  1NMU B;  3FFM A;  1KD1 H;  3S0Y A;  5EZY A;  4NQ3 A;  5JVD B;  5EB0 A;  2HVY D;  3G6E F;  3CCM F;  3MQW A;  3CME F;  2QA4 F;  3CG6 A;  1OAP A;  3AGK A;  1VQM F;  1YQN A;  2QEX F;  1XV2 A;  3LYB A;  4IHJ B;  5IJ9 A;  3C9R A;  2ZVY A;  4O4H B;  1H48 A;  1T0A A;  4YJ2 A;  5GON A;  2UYN A;  5CA1 B;  1JN1 A;  2NMU A;  2HRU A;  4YJ3 B;  4HNA A;  2LBW A;  4EI8 A;  5G4U C;  1FFX A;  3OON A;  5LYJ B;  1Q81 H;  4O4J A;  3VYS C;  4C8G A;  3K2X A;  1DBF A;  3S06 A;  3K12 A;  4C4W C;  3JAS B;  4X1I B;  4X1Y B;  3P0Z A;  4EB6 B;  3J80 M;  3VYU C;  1KNJ A;  3IEQ A;  1XHO A;  3PLA C;  2W8B C;  1Q82 H;  1XRG A;  4TV9 A;  5GON B;  4TUY B;  4U3J A;  2L26 A;  5LOV A;  3I56 F;  3M1X A;  2UZH A;  3LWO C;  1YIT F;  5DCV A;  1T0K B;  4PWT A;  3NMU C;  4HNA B;  5HY0 A;  3HJW C;  5J2T A;  5J2U A;  3UT5 A;  3KHN A;  4I50 B;  3ERN A;  3FD6 A;  2EWC A;  3CC7 F;  3J7A R;  4BT4 A;  1U3P A;  5GAN K;  2AIZ P;  3LME A;  2CHS A;  2QTP A;  2RHL A;  1VQ7 F;  1VHA A;  2H8E A;  4BVQ A;  5LXT A;  3QHD A;  1IPA A;  3ZP7 A;  1GO1 A;  3HWU A;  2RHO A;  3LWP C;  1YGY A;  2HS4 A;  4F6R B;  5EO3 A;  5EIB D;  1OFU A;  3HKC A;  4X1K A;  3NVI B;  3RE3 A;  1COM A;  3C9U A;  3S02 A;  1DT9 A;  2GVI A;  4X20 B;  1IV1 A;  1KQS F;  1U43 A;  2R6R 1;  3HKE B;  3V7E A;  3G71 F;  3SIV A;  5ITZ B;  3N2G A;  1IV3 A;  4WBN A;  3N2K B;  3O85 A;  2ZAU A;  1U40 A;  3CCQ F;  3B6N A;  3CCU F;  2OTJ F;  3IKF A;  1FSZ A;  1UFY A;  2I6D A;  3ZP4 A;  3FPI A;  5FLX M;  3CXC F;  1CK2 A;  2KTV A;  3IR9 A;  1KC8 H;  1VQV A;  5EIB C;  3WGN A;  4ZOL B;  4O4L B;  2IQQ A;  2P6Y A;  3FBA A;  3GYQ A;  2QI2 A;  2HS0 A;  3RYF B;  4IIJ A;  1VQP F;  2G9I A;  3CCL F;  5HXU A;  2UYJ A;  4E6E A;  5JVD A;  1X52 A;  5HP8 A;  2R75 1;  2KGW A;  1X7O A;  3WGM A;  3V7Q A;  3LWR C;  3I55 F;  2OHW A;  3DDN A;  5IJ0 B;  4IHJ A;  1NJI H;  2YXZ A;  1YHQ F;  1H47 A;  1YI2 F;  4O4H A;  3NK7 A;  1VQ4 F;  2OZB A;  5G4V C;  1ONI A;  5CA1 A;  1QU9 A;  3E1Y A;  4C82 A;  2OTL F;  5CA0 B;  3E22 B;  2PMP A;  4YJ3 A;  4B5C A;  3RYI B;  3K14 A;  5LYJ A;  1Q7Y H;  3KJK A;  3M84 A;  2DT4 A;  3VCZ A;  3VOB A;  3D54 A;  3JAS A;  1TUB B;  3JAK B;  5IT9 M;  3WXM B;  4B46 A;  4X1Y A;  3GHZ A;  4X1I A;  1W2B F;  4EB6 A;  1XBI A;  2CVL A;  2F9Z C;  3MCA B;  4I4T B;  2VAP A;  4TV8 A;  3CPW F;  4BY9 D;  1JY8 A;  2ZVZ A;  2CHT A;  1JFF B;  2JNB A;  4TUY A;  5GIO C;  4ZI7 B;  4O4I B;  1RA4 A;  5GIP C;  2IAF A;  2Q1Y A;  1Q86 H;  5JQG B;  5BMV B;  4RQO A;  2FGY A;  1GO0 A;  3JAL B;  4B62 A;  4RHA A;  1K73 H;  4I50 A;  5B8F A;  2DYY A;  2I6R A;  3I3F A;  4TV8 B;  3L7Q A;  3N4Z A;  3CCE F;  3CCJ F;  3M4S A;  1VQN F;  3JAM M;  3R0P A;  1W5E A;  3K0T A;  1CLI A;  3JAR B;  5JCO C;  2VGM A;  1YJW F;  2FC3 A;  4XCQ A;  3HKB B;  1CN7 A;  1W58 1;  3V3T A;  4F6R A;  3VIU A;  2Z1T A;  3FD5 A;  4O2B B;  4EI9 A;  3HKD B;  1Z5V A;  2K1S A;  2Z1E A;  2LCA A;  5MN6 A;  3LDT A;  4X20 A;  3F0G A;  3HKE A;  3WJP A;  1QVF F;  3F0D A;  3CD6 F;  5ITZ A;  1VH8 A;  5FNV B;  3RYC B;  4B45 A;  1GX1 A;  1W42 A;  2UYP A;  3N2K A;  3Q8H A;  1NQ3 A;  1RLU A;  5LP6 B;  4LNU B;  3HAX D;  3CCV F;  3JAW B;  3F6M A;  4DRX B;  5HP7 A;  2IG8 A;  4G88 A;  3ON1 A;  5KX5 B;  3OBW A;  4ERH A;  3WGJ A;  3JCM M;  4TZZ A;  4ZOL A;  4O4L A;  5KMG B;  1VQ6 F;  3RYF A;  1YJN F;  1M90 H;  2ZOD A;  2N48 A;  1RQ2 A;  2BTU A;  1RQ7 A;  2ALE A;  4O2A B;  2WAL A;  3ELC A;  5EYP B;  5FJ4 C;  5GIN C;  2VGN A;  1SA0 B;  3TD4 A;  3VI6 A;  2H6L A;  2HX0 A;  4BT7 A;  5IJ0 A;  4G4W A;  2CZW A;  3IMP A;  3J81 M;  5MN4 A;  4BVR A;  5GAP K;  5CA0 A;  3E22 A;  4C8I A;  3QUW A;  4I55 B;  2ZOV A;  2H8C A;  3EOR A;  4FFB B;  5EB1 B;  1TVK A;  1SZQ A;  3RYI A;  3BYQ A;  3MCQ A;  1IV4 A;  3TD3 A;  1VQK F; 
#chains in the Genus database with same CATH homology
 4BT5 A;  4BT4 A;  4BT6 A;  2NMU A;  1XV2 A;  3HWU A;  2H6L A;  2HX0 A;  4BT2 A;  4BT7 A;  2DT4 A;  2P6Y A;  3HTN A;  4BT3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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