2NMUA

Crystal structure of the hypothetical protein from salmonella typhimurium lt2. northeast structural genomics consortium target str127.
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
137
structure length
137
Chain Sequence
HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSRL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Dna binding protein
molecule keywords Putative DNA-binding protein
publication title Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
rcsb
source organism Salmonella typhimurium
total genus 30
structure length 137
sequence length 137
ec nomenclature
pdb deposition date 2006-10-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03479 DUF296 Plants and Prokaryotes Conserved (PCC) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.80 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 2nmuA01
2DT4A 4BT5A 2P6YA 3HWUA 2H6LA 1XV2A 4BT6A 2NMUA 2HX0A 3HTNA 4BT4A 4BT3A 4BT2A 4BT7A
chains in the Genus database with same CATH superfamily
1W5AA 1VQPF 2OTLF 1Q81H 3LYBA 2YYEA 1KD1H 4B5CA 4KWEA 2JNBA 1W5FA 3S0YA 1E7KA 3LWOC 4O4JB 3JASA 3E1YA 2GLZA 3WGNA 1TUBB 3NVKE 3TD5A 1VQ4F 2CSLA 3HKBB 1W5BA 4G4ZA 3WJPA 5HWEA 4C81A 1YJ9F 2UYKA 5KMGB 5CB4A 3JARB 1M90H 5EO3A 3F0EA 1Q7YH 3MBMA 1K8AH 4ZHQA 2F9ZC 3CC7F 2HP3A 3PAFA 2RB9A 1T0KB 1VK3A 1Z5VA 2Z1UA 5HY1A 4TV8B 1SA0B 4I55A 4U3JA 3RA6A 5EB0A 4IIJB 3V3TA 3P4EA 1U43A 4X1YA 3G6EF 2CW4A 5G4UC 4O4LA 3I7TA 4BVSA 2L26A 2KTVA 3CCJF 3ZOPA 1YITF 4EB6B 5ITZA 1R1MA 3GTZA 4NUTA 3S0WA 3DDNA 3HTNA 3N2KB 4BT2A 5HXZA 5IJ0B 4O2AA 4I50B 5FJ4C 2HX0A 3LWQC 2QI2A 5LP6A 1JFFB 2CVLA 3WXMB 1VHAA 2Q1XA 4FFBB 2IQQA 3CCRF 4BVTA 4BT6A 2GVIA 3VTIC 4O2BA 5EIBD 2CZWA 3KJJA 1W581 3QTYA 3N4ZA 1CN7A 1KNJA 2DT4A 5LA6B 4TV9A 3RE3A 5C8YB 2HS4A 4X3LA 5EZYB 4G4YA 2WALA 1OAPA 5IT9M 1Q8RA 1NMUB 3JALA 3NMUC 4IHJA 2OZBA 5GIPC 1CK2A 3MCQA 1OFUA 3R0PA 3UT5B 1SDSA 3K14A 4X3MA 3G71F 3C9RA 2FGYA 1VQLF 1GO0A 5HXUA 3LWVC 1RQ7A 3IKFA 4YJ3A 1U3PA 5JVDA 3CD6F 2UYNB 4E6EA 2IG8A 4HNAB 4ZOLB 3VYUC 1KQSF 3VMFB 5FLXM 5HY2A 1TVKA 1YHQF 3NK7A 1W40A 1H7MA 1PF5A 2Q1YA 3CCQF 4B45A 1W59A 3K12A 2EWCA 3RYCA 2LCAA 4LNUA 4EI8A 4LCKA 3CPQA 3HKDA 1JD1A 4YJ2B 2IAFA 4G4WA 3RYIA 3GYQA 2OHWA 5JQGA 3S03A 2VAMA 2Z1EA 3VYTC 1FFXA 3CB2A 2YXZA 5LOVA 2Z1FA 2ZAUA 3CCVF 5A2QM 1RA4A 2HVYD 3HJWC 2VAWA 4DRXB 2ZODA 1IV1A 3E20B 3CCMF 5J2UA 3CXCF 3WPXA 2ZOVA 3HKEB 1IV2A 2Z1TA 1VQ7F 1T0AA 4C82A 4G4VA 2VGMA 1Z5WA 3TD4A 3E22A 3K2XA 3IR9A 3JAWA 1NQ3A 3VCZA 4ERHA 3JASB 4BT3A 2V9YA 2OTMA 3I3FA 3N4YA 3PLAC 1QU9A 1FNJA 4O4HA 3F0GA 3F6MA 5CB4B 5MN4A 2OTJF 4RQOA 4U39A 2UYPA 2W8BC 5JH7A 3M84A 4ZHQB 3IKEA 1N8RH 1QAHA 3NVIB 5EYPA 2Z01A 3SIUA 4C8GA 2RHJA 4I55B 3AGKA 4U3JB 1CLIA 4B62A 1VQKF 4X20A 3J81M 4X1YB 3J80M 2ZVZA 4O4IA 5HP8A 1YI2F 1X7PA 3HKCA 4O4LB 4X1KA 1DBFA 2NMUA 3JCMM 3D01A 5ITZB 3ZP4A 1YJNF 5LYJB 3C9TA 2HRYA 3D54A 2HS0A 5JCOA 2BTQB 5IYZA 4I4TA 5DCVA 1J7HA 4BY9D 1X52A 4O2AB 3RYFA 2AIFA 1PXWA 5KX5B 1VQ5F 5LP6B 2ZF8A 3F0DA 4ZHWA 3JAKA 4ZI7A 5LXTA 4ZK7A 3N2GA 1H47A 2CWJA 5BMVA 1UFYA 5CA1A 3QUWA 3LDTA 4BT5A 2KG4A 1YGYA 1W3EX 4O2BB 2H6LA 1Q86H 3WJQA 3JATA 2RHOA 5EIBC 2R751 4X1IA 3VIUA 3FFMA 4TUYA 2PMPA 3WGJA 2BTUA 4TV9B 3DC2A 4BW0B 4BVQA 3JAMM 1FSZA 1UI9A 3RYHA 3JALB 1NJIH 4IHJB 5GONA 1KC8H 3M4SA 1XHOA 3M1XA 5HY0A 2ALEA 5EWRA 1VQ6F 2RHHA 1M1KH 5CA0A 5J2TA 1YIJF 1JN1A 4YJ3B 5GIOC 5JVDB 3OONA 3CG6A 1COMA 3VOBA 5IJ9A 1Q82H 1QD9A 2HQSC 3CC4F 2QA4F 2G9IA 4F6RA 4EI9A 3T80A 2RHLA 5GANK 1TVKB 3LMEA 1XV2A 4ZOLA 3RYCB 3KE1A 5HY4A 3CYQA 4LNUB 5AVMA 4BT7A 3HWUA 3HKDB 4ZHYB 3RYIB 5JQGB 2I6RA 1K73H 1FFXB 1JY8A 5LOVB 2AIZP 1U40A 2UZHA 1W42A 1GX1A 4PWTA 4WBNA 2HP0A 3OBWA 5J2UB 1GZ0A 1YQNA 2I6DA 3WPWA 3RA5A 5FNVA 5GAPK 3P0ZA 1RQ2A 5EAZA 3IMPA 3E22B 3ERNA 3I55F 3L7QA 4O4JA 1XRGA 3FPIA 1GO1A 2LBWA 1TUBA 4B46A 1W5EA 2HRUA 3F0FA 4G88A 3G4SF 3K0TA 1IV4A 3HKBA 1W41A 4O4HB 5KMGA 3CCSF 1K9MH 3JARA 2QTPA 1X7OA 5JH7B 3VYSC 2AMTA 1DT9A 4M8IA 4XCQA 1S72F 4NQ3A 5EYPB 3LFOA 2H8EA 1IPAA 2KTUA 3D00A 3MDOA 5EB1B 1RLUA 4TV8A 3KIZA 1SA0A 4IIJA 3P10A 4BVRA 4X20B 5GINC 4O4IB 3HKCB 2LBXA 3VO8A 4X1KB 3NK6A 4TZZA 2N48A 4EB6A 1QVFF 4C8IA 3QHDA 3ON1A 3S02A 2P6YA 3C9UA 2LBTA 3N2KA 5IYZB 4I4TB 3FBAA 4NWOB 3CMAF 3C8LA 2ZVYA 3VI6A 5IJ0A 4I50A 3RYFB 3V7QA 5LYJA 3S06A 3CCEF 3IEQA 2KGWA 1JFFA 4G4XA 3JAKB 4ZI7B 3WJRA 2PHNA 5LXTB 4FFBA 3N2GB 3OBYA 3VOAA 5KX5A 3FD5A 5BMVB 3S0HA 3SIVA 3ESJA 2VXYA 1W55A 2BTOA 2CHTA 3C9SA 3CYPB 5CA1B 2QEXF 3LWRC 3U0OA 4BT4A 2BO1A 3HAXD 3JATB 5MN6A 4X1IB 1YJWF 4TUYB 3JVHA 3CMEF 5MN5A 5LA6A 3V7EA 5C8YA 1FNKA 3I56F 3CCUF 3CCLF 5EZYA 1QVGF 2VGNA 3OW2F 3B6NA 3MCAB 3GHZA 4R40B 3RYHB 1VH8A 5GONB 1KNKA 5JCOC 5LP6C 1W57A 3BYQA 3UT5A 2B33A 1XBIA 3J7AR 1X25A 2R6R1 4C8EA 5CA0B 5J2TB 1VQ8F 3WGLA 3V4DA 3CPWF 1ONIA 2UYNA 3WGMA 1VQMF 5IJ9B 4HNAA 2HS3A 3Q8HA 5B8FA 3WGKA 4F6RB 2DYYA 3IEWA 1VQVA 1JJ2F 1VQOF 3ZP7A 2H8CA 1IV3A 2FC3A 3EORA 1U3LA 1ODEA 3KJKA 1W2BF 2UYJA 4C4WC 3MQWA 2MQEA 4YJ2A 4EI7A 3LWPC 1SZQA 2GZLA 1RLGA 3O85A 1H48A 4DXDA 5HP7A 2VAPA 1VQNF 4DRXA 4WBNB 2HP0B 1VQ9F 3ELCA 5G4VC 1ZWZA 3HKEA 3CC2F 3FD6A 3KHNA 2CHSA 4ZHVA 2K1SA 3JAWB 5FNVB 3ZO8A 3TD3A 4RHAA
chains in the Genus database with same CATH topology
2DT4A 4BT5A 2P6YA 3HWUA 2H6LA 1XV2A 4BT6A 2NMUA 2HX0A 3HTNA 4BT4A 4BT3A 4BT2A 4BT7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2DT4 A;  4BT5 A;  2P6Y A;  3HWU A;  2H6L A;  1XV2 A;  4BT6 A;  2NMU A;  2HX0 A;  3HTN A;  4BT4 A;  4BT3 A;  4BT2 A;  4BT7 A; 
#chains in the Genus database with same CATH topology
 1W5A A;  1VQP F;  2OTL F;  1Q81 H;  3LYB A;  2YYE A;  1KD1 H;  4B5C A;  4KWE A;  2JNB A;  1W5F A;  3S0Y A;  1E7K A;  3LWO C;  4O4J B;  3JAS A;  3E1Y A;  2GLZ A;  3WGN A;  1TUB B;  3NVK E;  3TD5 A;  1VQ4 F;  2CSL A;  3HKB B;  1W5B A;  4G4Z A;  3WJP A;  5HWE A;  4C81 A;  1YJ9 F;  2UYK A;  5KMG B;  5CB4 A;  3JAR B;  1M90 H;  5EO3 A;  3F0E A;  1Q7Y H;  3MBM A;  1K8A H;  4ZHQ A;  2F9Z C;  3CC7 F;  2HP3 A;  3PAF A;  2RB9 A;  1T0K B;  1VK3 A;  1Z5V A;  2Z1U A;  5HY1 A;  4TV8 B;  1SA0 B;  4I55 A;  4U3J A;  3RA6 A;  5EB0 A;  4IIJ B;  3V3T A;  3P4E A;  1U43 A;  4X1Y A;  3G6E F;  2CW4 A;  5G4U C;  4O4L A;  3I7T A;  4BVS A;  2L26 A;  2KTV A;  3CCJ F;  3ZOP A;  1YIT F;  4EB6 B;  5ITZ A;  1R1M A;  3GTZ A;  4NUT A;  3S0W A;  3DDN A;  3HTN A;  3N2K B;  4BT2 A;  5HXZ A;  5IJ0 B;  4O2A A;  4I50 B;  5FJ4 C;  2HX0 A;  3LWQ C;  2QI2 A;  5LP6 A;  1JFF B;  2CVL A;  3WXM B;  1VHA A;  2Q1X A;  4FFB B;  2IQQ A;  3CCR F;  4BVT A;  4BT6 A;  2GVI A;  3VTI C;  4O2B A;  5EIB D;  2CZW A;  3KJJ A;  1W58 1;  3QTY A;  3N4Z A;  1CN7 A;  1KNJ A;  2DT4 A;  5LA6 B;  4TV9 A;  3RE3 A;  5C8Y B;  2HS4 A;  4X3L A;  5EZY B;  4G4Y A;  2WAL A;  1OAP A;  5IT9 M;  1Q8R A;  1NMU B;  3JAL A;  3NMU C;  4IHJ A;  2OZB A;  5GIP C;  1CK2 A;  3MCQ A;  1OFU A;  3R0P A;  3UT5 B;  1SDS A;  3K14 A;  4X3M A;  3G71 F;  3C9R A;  2FGY A;  1VQL F;  1GO0 A;  5HXU A;  3LWV C;  1RQ7 A;  3IKF A;  4YJ3 A;  1U3P A;  5JVD A;  3CD6 F;  2UYN B;  4E6E A;  2IG8 A;  4HNA B;  4ZOL B;  3VYU C;  1KQS F;  3VMF B;  5FLX M;  5HY2 A;  1TVK A;  1YHQ F;  3NK7 A;  1W40 A;  1H7M A;  1PF5 A;  2Q1Y A;  3CCQ F;  4B45 A;  1W59 A;  3K12 A;  2EWC A;  3RYC A;  2LCA A;  4LNU A;  4EI8 A;  4LCK A;  3CPQ A;  3HKD A;  1JD1 A;  4YJ2 B;  2IAF A;  4G4W A;  3RYI A;  3GYQ A;  2OHW A;  5JQG A;  3S03 A;  2VAM A;  2Z1E A;  3VYT C;  1FFX A;  3CB2 A;  2YXZ A;  5LOV A;  2Z1F A;  2ZAU A;  3CCV F;  5A2Q M;  1RA4 A;  2HVY D;  3HJW C;  2VAW A;  4DRX B;  2ZOD A;  1IV1 A;  3E20 B;  3CCM F;  5J2U A;  3CXC F;  3WPX A;  2ZOV A;  3HKE B;  1IV2 A;  2Z1T A;  1VQ7 F;  1T0A A;  4C82 A;  4G4V A;  2VGM A;  1Z5W A;  3TD4 A;  3E22 A;  3K2X A;  3IR9 A;  3JAW A;  1NQ3 A;  3VCZ A;  4ERH A;  3JAS B;  4BT3 A;  2V9Y A;  2OTM A;  3I3F A;  3N4Y A;  3PLA C;  1QU9 A;  1FNJ A;  4O4H A;  3F0G A;  3F6M A;  5CB4 B;  5MN4 A;  2OTJ F;  4RQO A;  4U39 A;  2UYP A;  2W8B C;  5JH7 A;  3M84 A;  4ZHQ B;  3IKE A;  1N8R H;  1QAH A;  3NVI B;  5EYP A;  2Z01 A;  3SIU A;  4C8G A;  2RHJ A;  4I55 B;  3AGK A;  4U3J B;  1CLI A;  4B62 A;  1VQK F;  4X20 A;  3J81 M;  4X1Y B;  3J80 M;  2ZVZ A;  4O4I A;  5HP8 A;  1YI2 F;  1X7P A;  3HKC A;  4O4L B;  4X1K A;  1DBF A;  2NMU A;  3JCM M;  3D01 A;  5ITZ B;  3ZP4 A;  1YJN F;  5LYJ B;  3C9T A;  2HRY A;  3D54 A;  2HS0 A;  5JCO A;  2BTQ B;  5IYZ A;  4I4T A;  5DCV A;  1J7H A;  4BY9 D;  1X52 A;  4O2A B;  3RYF A;  2AIF A;  1PXW A;  5KX5 B;  1VQ5 F;  5LP6 B;  2ZF8 A;  3F0D A;  4ZHW A;  3JAK A;  4ZI7 A;  5LXT A;  4ZK7 A;  3N2G A;  1H47 A;  2CWJ A;  5BMV A;  1UFY A;  5CA1 A;  3QUW A;  3LDT A;  4BT5 A;  2KG4 A;  1YGY A;  1W3E X;  4O2B B;  2H6L A;  1Q86 H;  3WJQ A;  3JAT A;  2RHO A;  5EIB C;  2R75 1;  4X1I A;  3VIU A;  3FFM A;  4TUY A;  2PMP A;  3WGJ A;  2BTU A;  4TV9 B;  3DC2 A;  4BW0 B;  4BVQ A;  3JAM M;  1FSZ A;  1UI9 A;  3RYH A;  3JAL B;  1NJI H;  4IHJ B;  5GON A;  1KC8 H;  3M4S A;  1XHO A;  3M1X A;  5HY0 A;  2ALE A;  5EWR A;  1VQ6 F;  2RHH A;  1M1K H;  5CA0 A;  5J2T A;  1YIJ F;  1JN1 A;  4YJ3 B;  5GIO C;  5JVD B;  3OON A;  3CG6 A;  1COM A;  3VOB A;  5IJ9 A;  1Q82 H;  1QD9 A;  2HQS C;  3CC4 F;  2QA4 F;  2G9I A;  4F6R A;  4EI9 A;  3T80 A;  2RHL A;  5GAN K;  1TVK B;  3LME A;  1XV2 A;  4ZOL A;  3RYC B;  3KE1 A;  5HY4 A;  3CYQ A;  4LNU B;  5AVM A;  4BT7 A;  3HWU A;  3HKD B;  4ZHY B;  3RYI B;  5JQG B;  2I6R A;  1K73 H;  1FFX B;  1JY8 A;  5LOV B;  2AIZ P;  1U40 A;  2UZH A;  1W42 A;  1GX1 A;  4PWT A;  4WBN A;  2HP0 A;  3OBW A;  5J2U B;  1GZ0 A;  1YQN A;  2I6D A;  3WPW A;  3RA5 A;  5FNV A;  5GAP K;  3P0Z A;  1RQ2 A;  5EAZ A;  3IMP A;  3E22 B;  3ERN A;  3I55 F;  3L7Q A;  4O4J A;  1XRG A;  3FPI A;  1GO1 A;  2LBW A;  1TUB A;  4B46 A;  1W5E A;  2HRU A;  3F0F A;  4G88 A;  3G4S F;  3K0T A;  1IV4 A;  3HKB A;  1W41 A;  4O4H B;  5KMG A;  3CCS F;  1K9M H;  3JAR A;  2QTP A;  1X7O A;  5JH7 B;  3VYS C;  2AMT A;  1DT9 A;  4M8I A;  4XCQ A;  1S72 F;  4NQ3 A;  5EYP B;  3LFO A;  2H8E A;  1IPA A;  2KTU A;  3D00 A;  3MDO A;  5EB1 B;  1RLU A;  4TV8 A;  3KIZ A;  1SA0 A;  4IIJ A;  3P10 A;  4BVR A;  4X20 B;  5GIN C;  4O4I B;  3HKC B;  2LBX A;  3VO8 A;  4X1K B;  3NK6 A;  4TZZ A;  2N48 A;  4EB6 A;  1QVF F;  4C8I A;  3QHD A;  3ON1 A;  3S02 A;  2P6Y A;  3C9U A;  2LBT A;  3N2K A;  5IYZ B;  4I4T B;  3FBA A;  4NWO B;  3CMA F;  3C8L A;  2ZVY A;  3VI6 A;  5IJ0 A;  4I50 A;  3RYF B;  3V7Q A;  5LYJ A;  3S06 A;  3CCE F;  3IEQ A;  2KGW A;  1JFF A;  4G4X A;  3JAK B;  4ZI7 B;  3WJR A;  2PHN A;  5LXT B;  4FFB A;  3N2G B;  3OBY A;  3VOA A;  5KX5 A;  3FD5 A;  5BMV B;  3S0H A;  3SIV A;  3ESJ A;  2VXY A;  1W55 A;  2BTO A;  2CHT A;  3C9S A;  3CYP B;  5CA1 B;  2QEX F;  3LWR C;  3U0O A;  4BT4 A;  2BO1 A;  3HAX D;  3JAT B;  5MN6 A;  4X1I B;  1YJW F;  4TUY B;  3JVH A;  3CME F;  5MN5 A;  5LA6 A;  3V7E A;  5C8Y A;  1FNK A;  3I56 F;  3CCU F;  3CCL F;  5EZY A;  1QVG F;  2VGN A;  3OW2 F;  3B6N A;  3MCA B;  3GHZ A;  4R40 B;  3RYH B;  1VH8 A;  5GON B;  1KNK A;  5JCO C;  5LP6 C;  1W57 A;  3BYQ A;  3UT5 A;  2B33 A;  1XBI A;  3J7A R;  1X25 A;  2R6R 1;  4C8E A;  5CA0 B;  5J2T B;  1VQ8 F;  3WGL A;  3V4D A;  3CPW F;  1ONI A;  2UYN A;  3WGM A;  1VQM F;  5IJ9 B;  4HNA A;  2HS3 A;  3Q8H A;  5B8F A;  3WGK A;  4F6R B;  2DYY A;  3IEW A;  1VQV A;  1JJ2 F;  1VQO F;  3ZP7 A;  2H8C A;  1IV3 A;  2FC3 A;  3EOR A;  1U3L A;  1ODE A;  3KJK A;  1W2B F;  2UYJ A;  4C4W C;  3MQW A;  2MQE A;  4YJ2 A;  4EI7 A;  3LWP C;  1SZQ A;  2GZL A;  1RLG A;  3O85 A;  1H48 A;  4DXD A;  5HP7 A;  2VAP A;  1VQN F;  4DRX A;  4WBN B;  2HP0 B;  1VQ9 F;  3ELC A;  5G4V C;  1ZWZ A;  3HKE A;  3CC2 F;  3FD6 A;  3KHN A;  2CHS A;  4ZHV A;  2K1S A;  3JAW B;  5FNV B;  3ZO8 A;  3TD3 A;  4RHA A; 
#chains in the Genus database with same CATH homology
 2DT4 A;  4BT5 A;  2P6Y A;  3HWU A;  2H6L A;  1XV2 A;  4BT6 A;  2NMU A;  2HX0 A;  3HTN A;  4BT4 A;  4BT3 A;  4BT2 A;  4BT7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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