2NMUA

Crystal structure of the hypothetical protein from salmonella typhimurium lt2. northeast structural genomics consortium target str127.
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
137
structure length
137
Chain Sequence
b'HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEATTSLTGTFEVISLNGTLELTGEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQPCAISGYDELHISSRL'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of the hypothetical protein from Salmonella typhimurium LT2. Northeast Structural Genomics Consortium target StR127.
rcsb
molecule keywords Putative DNA-binding protein
source organism Salmonella typhimurium
molecule tags Dna binding protein
total genus 30
structure length 137
sequence length 137
ec nomenclature
pdb deposition date 2006-10-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03479 DUF296 Plants and Prokaryotes Conserved (PCC) domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1330.80 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30; Chain: A; Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 2nmuA01
1XV2A 4BT3A 4BT5A 2H6LA 2DT4A 3HWUA 4BT7A 2NMUA 3HTNA 4BT4A 4BT2A 4BT6A 2P6YA 2HX0A
chains in the Genus database with same CATH superfamily
3K12A 4LNUA 3P10A 3HKEB 1JN1A 3WGJA 5HY4A 4ZHYB 1W55A 4PWTA 3VYSC 3F0EA 3ERNA 4NUTA 1FFXA 1KNKA 2CZWA 4I55A 2KTUA 4B62A 5B8FA 5EIBD 4G88A 3E22A 5CA1B 3ZOPA 5MN5A 2Q1XA 5GAPK 1Q82H 1CN7A 4X3LA 2Q1YA 1W5FA 1VQ5F 4O4LA 3CMEF 4ZHVA 3N4YA 1K73H 3HKCA 1DT9A 2NMUA 1TUBA 4M8IA 5CA0B 5C8YB 5CB4A 3R0PA 2LCAA 1VQLF 5JQGB 1NJIH 2GZLA 3N2KA 3RYIA 4DRXB 1SA0A 3C8LA 5GANK 3CPQA 4WBNA 3NVKE 3IR9A 4X1IB 1U3LA 3LWOC 3CB2A 3JAWB 3VOBA 2IQQA 2VGNA 4I50B 2R751 5EZYA 2UYNA 5A2QM 5JCOC 3KE1A 5HP8A 3OW2F 2Z01A 3NVIB 4O4JA 2CSLA 4BVSA 5IJ0A 1YIJF 3CCRF 2HX0A 3S03A 1TVKA 1YQNA 1ZWZA 4X1YA 4EB6B 1OFUA 4ZOLA 3PAFA 1K9MH 4X3MA 5GIPC 3JATB 1QU9A 3B6NA 2HP0B 1RLUA 5JH7A 5LP6B 1FNJA 4BT2A 3LMEA 5JVDA 1YITF 1T0KB 1PF5A 1XBIA 2HP3A 4HNAB 1QD9A 2HS4A 3C9SA 3DC2A 1W2BF 2K1SA 3P0ZA 5J2TB 1QVGF 2WALA 4F6RB 5HWEA 2IG8A 1IV3A 3VIUA 4O2BB 3VI6A 3SIVA 2HQSC 4IHJA 5AVMA 4BVRA 3HKBB 3MCAB 4O4HA 2Z1FA 1H48A 1S72F 3S06A 1Q7YH 4B46A 4O2AA 5EB0A 3WGLA 1QAHA 1YJ9F 3CYPB 1VK3A 3JALA 1KQSF 5EO3A 5JCOA 2HVYD 2BTOA 3WGMA 3DDNA 3WXMB 4TUYA 5BMVB 4TV9B 3V3TA 3ZP4A 1CK2A 4YJ3A 5LXTB 5IJ9B 5DCVA 3TD3A 2RHLA 5LA6B 2CVLA 3QHDA 4YJ2B 2PMPA 5ITZB 4BVTA 5J2UB 1W40A 3F6MA 1RQ7A 2HRYA 3HKEA 2OTMA 1E7KA 2KGWA 3CCLF 2Z1TA 1SDSA 2RHJA 4G4VA 4BT7A 5GONB 5CA1A 3J81M 3U0OA 2RB9A 3CCJF 2DT4A 4BT6A 2CW4A 5GINC 2HS0A 1NQ3A 3C9TA 3I55F 2H8EA 3CCUF 3CD6F 5CA0A 5KMGB 3J80M 3GHZA 2I6RA 3RYCB 3CC7F 3CPWF 3JVHA 1W5AA 4R40B 5KX5A 1ONIA 2Z1UA 5FLXM 4DRXA 5LYJB 3KHNA 3JAKB 1M90H 3K14A 3CC4F 2QI2A 3V4DA 1R1MA 3JAMM 3JAWA 4I50A 3RE3A 3FD5A 5EAZA 4TV8B 1JJ2F 2LBXA 3JARB 1Q81H 3KJKA 1VQPF 3E1YA 3ON1A 5MN4A 1W581 4EB6A 1T0AA 1H47A 3LWRC 3GTZA 2QEXF 1SZQA 3JATA 3ZO8A 3WPWA 3VO8A 3AGKA 2VAWA 1VQVA 3LDTA 2HP0A 5LP6A 5HXZA 3S0HA 2GLZA 1DBFA 3L7QA 3S0YA 3LWVC 3HJWC 2R6R1 3K0TA 1KC8H 4BW0B 4BT4A 5J2TA 3HKDB 4O4LB 4C4WC 4TZZA 2VAPA 5EYPB 2OTLF 5HY0A 3N4ZA 4G4ZA 4F6RA 1Z5WA 3VOAA 3CCMF 3HTNA 2FGYA 1RQ2A 1W5EA 4O2BA 4O4IB 2PHNA 4BT3A 3RYHB 2LBTA 3IEQA 4ZHQA 3JCMM 3F0DA 3HKBA 3CXCF 3CYQA 2ALEA 4FFBB 5EZYB 3FFMA 2B33A 3WJRA 4ZI7B 3MDOA 1W42A 2FC3A 3C9RA 1X25A 1W3EX 1IV1A 1GO0A 3JASB 5BMVA 4TV9A 4X1YB 2MQEA 5LXTA 2KTVA 5IJ9A 3CCSF 4EI9A 2AIZP 4G4WA 5LA6A 5GIOC 1ODEA 2RHOA 3OONA 4YJ2A 5ITZA 3K2XA 3M4SA 5J2UA 2OZBA 2P6YA 1JD1A 2UYPA 1RLGA 4X20B 1VQOF 1GX1A 1W59A 3ELCA 2ZOVA 3F0FA 2ZVZA 3CG6A 3NK6A 1YJNF 4B5CA 1JFFB 4IIJA 3RA6A 3SIUA 4XCQA 1M1KH 4G4XA 5GONA 2HRUA 2KG4A 4ZHWA 4NQ3A 3G71F 1W5BA 4U3JB 3LWQC 4BT5A 1X7OA 2ZVYA 5LP6C 1YI2F 2CWJA 4X1KB 3QUWA 2VGMA 3V7EA 5IYZB 4NWOB 3LFOA 3LWPC 1N8RH 5KMGA 2QA4F 2DYYA 3RYCA 2VAMA 1RA4A 3UT5B 3P4EA 5LYJA 3JAKA 3FPIA 2G9IA 3WPXA 1COMA 2L26A 3TD5A 3RA5A 3CMAF 3F0GA 5HXUA 3J7AR 5LOVB 1XRGA 5C8YA 5HP7A 2AIFA 4I4TB 4TV8A 5FNVB 1QVFF 5JQGA 3JARA 3I7TA 1VQ4F 2H8CA 3MCQA 1VQ8F 3LYBA 2Z1EA 1U40A 2UYKA 4X1IA 3S02A 4B45A 5FJ4C 4C8GA 3N2GB 4C8IA 2LBWA 1VQNF 3S0WA 1W57A 3O85A 3TD4A 3I3FA 4RHAA 1YJWF 3BYQA 1Q86H 3RYFB 3HAXD 2GVIA 3OBWA 4LNUB 3HKDA 1CLIA 3VYUC 2V9YA 2CHTA 5EYPA 1YHQF 4U39A 1X7PA 2RHHA 1W41A 1VQ9F 1FFXB 1PXWA 4I55B 2OHWA 2N48A 4O4IA 3E22B 3D54A 1XHOA 3PLAC 3RYHA 2H6LA 4HNAA 3VMFB 5KX5B 2UZHA 3C9UA 3WGNA 1H7MA 5G4VC 2HS3A 5EB1B 4FFBA 3HKCB 1OAPA 1J7HA 2ZAUA 2F9ZC 1K8AH 3M1XA 1TUBB 1U3PA 3IKEA 5CB4B 5EWRA 4ZI7A 4E6EA 1Z5VA 4ZK7A 3IMPA 3N2KB 3RYIB 1SA0B 3WJPA 3NMUC 2OTJF 2YYEA 2I6DA 3FBAA 4WBNB 3JASA 3G6EF 3CCVF 2AMTA 1VH8A 2UYNB 3M84A 4RQOA 1VQ6F 3Q8HA 3G4SF 2EWCA 4O4JB 2CHSA 2QTPA 4ERHA 5MN6A 2JNBA 3ESJA 5IJ0B 2BTUA 3IEWA 3FD6A 3WJQA 4EI7A 1TVKB 4X20A 3VTIC 3HWUA 3KJJA 3CCQF 1JFFA 4ZOLB 3VYTC 1UI9A 1FNKA 5G4UC 4BY9D 2UYJA 1IV4A 3V7QA 3I56F 1KNJA 5JH7B 4U3JA 3KIZA 5JVDB 1FSZA 3D00A 3QTYA 4X1KA 3D01A 4ZHQB 3MQWA 3EORA 5IYZA 1IPAA 2W8BC 1YGYA 4EI8A 5IT9M 1GZ0A 2VXYA 1VHAA 2ZODA 1Q8RA 3UT5A 5EIBC 4C81A 4DXDA 2IAFA 1IV2A 5HY1A 4IHJB 2BTQB 3VCZA 1NMUB 1UFYA 1KD1H 4KWEA 4C82A 4O4HB 3IKFA 4BVQA 2YXZA 5LOVA 3ZP7A 4I4TA 5FNVA 2ZF8A 4C8EA 4O2AB 1VQ7F 3GYQA 3CC2F 3E20B 3JALB 2BO1A 1GO1A 3T80A 3CCEF 3NK7A 3MBMA 1U43A 1XV2A 3OBYA 3WGKA 4LCKA 1VQMF 4TUYB 3N2GA 4YJ3B 4G4YA 5HY2A 1VQKF 1JY8A 4IIJB 1X52A 3RYFA
chains in the Genus database with same CATH topology
1XV2A 4BT3A 4BT5A 2H6LA 2DT4A 3HWUA 4BT7A 2NMUA 3HTNA 4BT4A 4BT2A 4BT6A 2P6YA 2HX0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XV2 A;  4BT3 A;  4BT5 A;  2H6L A;  2DT4 A;  3HWU A;  4BT7 A;  2NMU A;  3HTN A;  4BT4 A;  4BT2 A;  4BT6 A;  2P6Y A;  2HX0 A; 
#chains in the Genus database with same CATH topology
 3K12 A;  4LNU A;  3P10 A;  3HKE B;  1JN1 A;  3WGJ A;  5HY4 A;  4ZHY B;  1W55 A;  4PWT A;  3VYS C;  3F0E A;  3ERN A;  4NUT A;  1FFX A;  1KNK A;  2CZW A;  4I55 A;  2KTU A;  4B62 A;  5B8F A;  5EIB D;  4G88 A;  3E22 A;  5CA1 B;  3ZOP A;  5MN5 A;  2Q1X A;  5GAP K;  1Q82 H;  1CN7 A;  4X3L A;  2Q1Y A;  1W5F A;  1VQ5 F;  4O4L A;  3CME F;  4ZHV A;  3N4Y A;  1K73 H;  3HKC A;  1DT9 A;  2NMU A;  1TUB A;  4M8I A;  5CA0 B;  5C8Y B;  5CB4 A;  3R0P A;  2LCA A;  1VQL F;  5JQG B;  1NJI H;  2GZL A;  3N2K A;  3RYI A;  4DRX B;  1SA0 A;  3C8L A;  5GAN K;  3CPQ A;  4WBN A;  3NVK E;  3IR9 A;  4X1I B;  1U3L A;  3LWO C;  3CB2 A;  3JAW B;  3VOB A;  2IQQ A;  2VGN A;  4I50 B;  2R75 1;  5EZY A;  2UYN A;  5A2Q M;  5JCO C;  3KE1 A;  5HP8 A;  3OW2 F;  2Z01 A;  3NVI B;  4O4J A;  2CSL A;  4BVS A;  5IJ0 A;  1YIJ F;  3CCR F;  2HX0 A;  3S03 A;  1TVK A;  1YQN A;  1ZWZ A;  4X1Y A;  4EB6 B;  1OFU A;  4ZOL A;  3PAF A;  1K9M H;  4X3M A;  5GIP C;  3JAT B;  1QU9 A;  3B6N A;  2HP0 B;  1RLU A;  5JH7 A;  5LP6 B;  1FNJ A;  4BT2 A;  3LME A;  5JVD A;  1YIT F;  1T0K B;  1PF5 A;  1XBI A;  2HP3 A;  4HNA B;  1QD9 A;  2HS4 A;  3C9S A;  3DC2 A;  1W2B F;  2K1S A;  3P0Z A;  5J2T B;  1QVG F;  2WAL A;  4F6R B;  5HWE A;  2IG8 A;  1IV3 A;  3VIU A;  4O2B B;  3VI6 A;  3SIV A;  2HQS C;  4IHJ A;  5AVM A;  4BVR A;  3HKB B;  3MCA B;  4O4H A;  2Z1F A;  1H48 A;  1S72 F;  3S06 A;  1Q7Y H;  4B46 A;  4O2A A;  5EB0 A;  3WGL A;  1QAH A;  1YJ9 F;  3CYP B;  1VK3 A;  3JAL A;  1KQS F;  5EO3 A;  5JCO A;  2HVY D;  2BTO A;  3WGM A;  3DDN A;  3WXM B;  4TUY A;  5BMV B;  4TV9 B;  3V3T A;  3ZP4 A;  1CK2 A;  4YJ3 A;  5LXT B;  5IJ9 B;  5DCV A;  3TD3 A;  2RHL A;  5LA6 B;  2CVL A;  3QHD A;  4YJ2 B;  2PMP A;  5ITZ B;  4BVT A;  5J2U B;  1W40 A;  3F6M A;  1RQ7 A;  2HRY A;  3HKE A;  2OTM A;  1E7K A;  2KGW A;  3CCL F;  2Z1T A;  1SDS A;  2RHJ A;  4G4V A;  4BT7 A;  5GON B;  5CA1 A;  3J81 M;  3U0O A;  2RB9 A;  3CCJ F;  2DT4 A;  4BT6 A;  2CW4 A;  5GIN C;  2HS0 A;  1NQ3 A;  3C9T A;  3I55 F;  2H8E A;  3CCU F;  3CD6 F;  5CA0 A;  5KMG B;  3J80 M;  3GHZ A;  2I6R A;  3RYC B;  3CC7 F;  3CPW F;  3JVH A;  1W5A A;  4R40 B;  5KX5 A;  1ONI A;  2Z1U A;  5FLX M;  4DRX A;  5LYJ B;  3KHN A;  3JAK B;  1M90 H;  3K14 A;  3CC4 F;  2QI2 A;  3V4D A;  1R1M A;  3JAM M;  3JAW A;  4I50 A;  3RE3 A;  3FD5 A;  5EAZ A;  4TV8 B;  1JJ2 F;  2LBX A;  3JAR B;  1Q81 H;  3KJK A;  1VQP F;  3E1Y A;  3ON1 A;  5MN4 A;  1W58 1;  4EB6 A;  1T0A A;  1H47 A;  3LWR C;  3GTZ A;  2QEX F;  1SZQ A;  3JAT A;  3ZO8 A;  3WPW A;  3VO8 A;  3AGK A;  2VAW A;  1VQV A;  3LDT A;  2HP0 A;  5LP6 A;  5HXZ A;  3S0H A;  2GLZ A;  1DBF A;  3L7Q A;  3S0Y A;  3LWV C;  3HJW C;  2R6R 1;  3K0T A;  1KC8 H;  4BW0 B;  4BT4 A;  5J2T A;  3HKD B;  4O4L B;  4C4W C;  4TZZ A;  2VAP A;  5EYP B;  2OTL F;  5HY0 A;  3N4Z A;  4G4Z A;  4F6R A;  1Z5W A;  3VOA A;  3CCM F;  3HTN A;  2FGY A;  1RQ2 A;  1W5E A;  4O2B A;  4O4I B;  2PHN A;  4BT3 A;  3RYH B;  2LBT A;  3IEQ A;  4ZHQ A;  3JCM M;  3F0D A;  3HKB A;  3CXC F;  3CYQ A;  2ALE A;  4FFB B;  5EZY B;  3FFM A;  2B33 A;  3WJR A;  4ZI7 B;  3MDO A;  1W42 A;  2FC3 A;  3C9R A;  1X25 A;  1W3E X;  1IV1 A;  1GO0 A;  3JAS B;  5BMV A;  4TV9 A;  4X1Y B;  2MQE A;  5LXT A;  2KTV A;  5IJ9 A;  3CCS F;  4EI9 A;  2AIZ P;  4G4W A;  5LA6 A;  5GIO C;  1ODE A;  2RHO A;  3OON A;  4YJ2 A;  5ITZ A;  3K2X A;  3M4S A;  5J2U A;  2OZB A;  2P6Y A;  1JD1 A;  2UYP A;  1RLG A;  4X20 B;  1VQO F;  1GX1 A;  1W59 A;  3ELC A;  2ZOV A;  3F0F A;  2ZVZ A;  3CG6 A;  3NK6 A;  1YJN F;  4B5C A;  1JFF B;  4IIJ A;  3RA6 A;  3SIU A;  4XCQ A;  1M1K H;  4G4X A;  5GON A;  2HRU A;  2KG4 A;  4ZHW A;  4NQ3 A;  3G71 F;  1W5B A;  4U3J B;  3LWQ C;  4BT5 A;  1X7O A;  2ZVY A;  5LP6 C;  1YI2 F;  2CWJ A;  4X1K B;  3QUW A;  2VGM A;  3V7E A;  5IYZ B;  4NWO B;  3LFO A;  3LWP C;  1N8R H;  5KMG A;  2QA4 F;  2DYY A;  3RYC A;  2VAM A;  1RA4 A;  3UT5 B;  3P4E A;  5LYJ A;  3JAK A;  3FPI A;  2G9I A;  3WPX A;  1COM A;  2L26 A;  3TD5 A;  3RA5 A;  3CMA F;  3F0G A;  5HXU A;  3J7A R;  5LOV B;  1XRG A;  5C8Y A;  5HP7 A;  2AIF A;  4I4T B;  4TV8 A;  5FNV B;  1QVF F;  5JQG A;  3JAR A;  3I7T A;  1VQ4 F;  2H8C A;  3MCQ A;  1VQ8 F;  3LYB A;  2Z1E A;  1U40 A;  2UYK A;  4X1I A;  3S02 A;  4B45 A;  5FJ4 C;  4C8G A;  3N2G B;  4C8I A;  2LBW A;  1VQN F;  3S0W A;  1W57 A;  3O85 A;  3TD4 A;  3I3F A;  4RHA A;  1YJW F;  3BYQ A;  1Q86 H;  3RYF B;  3HAX D;  2GVI A;  3OBW A;  4LNU B;  3HKD A;  1CLI A;  3VYU C;  2V9Y A;  2CHT A;  5EYP A;  1YHQ F;  4U39 A;  1X7P A;  2RHH A;  1W41 A;  1VQ9 F;  1FFX B;  1PXW A;  4I55 B;  2OHW A;  2N48 A;  4O4I A;  3E22 B;  3D54 A;  1XHO A;  3PLA C;  3RYH A;  2H6L A;  4HNA A;  3VMF B;  5KX5 B;  2UZH A;  3C9U A;  3WGN A;  1H7M A;  5G4V C;  2HS3 A;  5EB1 B;  4FFB A;  3HKC B;  1OAP A;  1J7H A;  2ZAU A;  2F9Z C;  1K8A H;  3M1X A;  1TUB B;  1U3P A;  3IKE A;  5CB4 B;  5EWR A;  4ZI7 A;  4E6E A;  1Z5V A;  4ZK7 A;  3IMP A;  3N2K B;  3RYI B;  1SA0 B;  3WJP A;  3NMU C;  2OTJ F;  2YYE A;  2I6D A;  3FBA A;  4WBN B;  3JAS A;  3G6E F;  3CCV F;  2AMT A;  1VH8 A;  2UYN B;  3M84 A;  4RQO A;  1VQ6 F;  3Q8H A;  3G4S F;  2EWC A;  4O4J B;  2CHS A;  2QTP A;  4ERH A;  5MN6 A;  2JNB A;  3ESJ A;  5IJ0 B;  2BTU A;  3IEW A;  3FD6 A;  3WJQ A;  4EI7 A;  1TVK B;  4X20 A;  3VTI C;  3HWU A;  3KJJ A;  3CCQ F;  1JFF A;  4ZOL B;  3VYT C;  1UI9 A;  1FNK A;  5G4U C;  4BY9 D;  2UYJ A;  1IV4 A;  3V7Q A;  3I56 F;  1KNJ A;  5JH7 B;  4U3J A;  3KIZ A;  5JVD B;  1FSZ A;  3D00 A;  3QTY A;  4X1K A;  3D01 A;  4ZHQ B;  3MQW A;  3EOR A;  5IYZ A;  1IPA A;  2W8B C;  1YGY A;  4EI8 A;  5IT9 M;  1GZ0 A;  2VXY A;  1VHA A;  2ZOD A;  1Q8R A;  3UT5 A;  5EIB C;  4C81 A;  4DXD A;  2IAF A;  1IV2 A;  5HY1 A;  4IHJ B;  2BTQ B;  3VCZ A;  1NMU B;  1UFY A;  1KD1 H;  4KWE A;  4C82 A;  4O4H B;  3IKF A;  4BVQ A;  2YXZ A;  5LOV A;  3ZP7 A;  4I4T A;  5FNV A;  2ZF8 A;  4C8E A;  4O2A B;  1VQ7 F;  3GYQ A;  3CC2 F;  3E20 B;  3JAL B;  2BO1 A;  1GO1 A;  3T80 A;  3CCE F;  3NK7 A;  3MBM A;  1U43 A;  1XV2 A;  3OBY A;  3WGK A;  4LCK A;  1VQM F;  4TUY B;  3N2G A;  4YJ3 B;  4G4Y A;  5HY2 A;  1VQK F;  1JY8 A;  4IIJ B;  1X52 A;  3RYF A; 
#chains in the Genus database with same CATH homology
 1XV2 A;  4BT3 A;  4BT5 A;  2H6L A;  2DT4 A;  3HWU A;  4BT7 A;  2NMU A;  3HTN A;  4BT4 A;  4BT2 A;  4BT6 A;  2P6Y A;  2HX0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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