2NRPA

Moea r350a
Total Genus 99
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
99
sequence length
403
structure length
403
Chain Sequence
LMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDVVSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGAPVPEGCEAVVMQEQTEQMDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAELPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGCEVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVRTASRLKKTPGRLDFQAGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGNVEVGEWVEVEPFNALFG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Biosynthetic protein
molecule keywords Molybdopterin biosynthesis protein moeA
publication title Mutational Analysis of Escherichia coli MoeA: Two Functional Activities Map to the Active Site Cleft.
pubmed doi rcsb
source organism Escherichia coli
total genus 99
structure length 403
sequence length 403
chains with identical sequence B
ec nomenclature ec 2.10.1.1: Molybdopterin molybdotransferase.
pdb deposition date 2006-11-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
A PF03453 MoeA_N MoeA N-terminal region (domain I and II)
A PF03454 MoeA_C MoeA C-terminal region (domain IV)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.340.10 Mainly Beta Beta Barrel Beta-clip MoeA, C-terminal, domain IV 2nrpA04
2.170.190.11 Mainly Beta Beta Complex Molybdopterin biosynthesis moeA protein; domain 3 Molybdopterin biosynthesis moea protein, domain 3. 2nrpA03
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 2nrpA01
3.90.105.10 Alpha Beta Alpha-Beta Complex Molybdopterin biosynthesis moea protein, domain 2 Molybdopterin biosynthesis moea protein, domain 2 2nrpA02
4TK1A 5ERVA 1IHCA 2G4RA 2NQSA 2G2CA 5ERUA 1O8OA 2F7YA 4CTAA 2PBQA 2NROA 4PD0A 5ERQA 4U91A 2NQNA 1UUYA 3MCHA 2IS8A 1DI6A 1EAVA 4TK4A 5ERSA 4TK3A 2NQUA 1R2KA 2NRPA 1XI8A 1JLJA 4CT8A 3MCJA 3OI9A 1G8LA 2FTSA 5G2SA 2F7WA 2NQKA 5ERTA 2FU3A 3KBQA 3K6AA 3IWTA 1Y5EA 2NQVA 5ERRA 1FC5A 1O8NA 4UUXA 5G2RA 4UUWA 1DI7A 1UZ5A 4U90A 3TCRA 4XCWA 4PD1A 1WU2A 1T3EA 1UUXA 3PZYA 4CT9A 3RFQA 2QQ1A 1MKZA 2X3LA 4NWOA 4UOCA 2NQQA 2NQRA 1O8QA 4TWGA 1G8RA 2NQMA 3MCIA 4LHBA 4CTAB 2NRSA
chains in the Genus database with same CATH superfamily
4TK1A 1YZYA 5ERVA 1IHCA 2G4RA 2NQSA 2G2CA 5D8HB 5ERUA 1O8OA 2F7YA 4CTAA 2PBQA 2NROA 4PD0A 5DMHA 5ERQA 4U91A 2NQNA 1UUYA 3MCHA 2IS8A 1DI6A 1EAVA 4TK4A 5ERSA 4TK3A 2NQUA 1R2KA 2NRPA 1XI8A 1I6VD 1JLJA 5D6GA 4CT8A 3MCJA 3OI9A 1G8LA 2FTSA 5G2SA 2F7WA 2NQKA 5ERTA 2FU3A 3KBQA 3K6AA 3IWTA 1Y5EA 3DQQA 2NQVA 5ERRA 1FC5A 3JSYA 1O8NA 4UUXA 5G2RA 1IW7D 4UUWA 1DI7A 1UZ5A 4U90A 3TCRA 4XCWA 4PD1A 1WU2A 1HQMD 1T3EA 1UUXA 3PZYA 4CT9A 4NWBA 3RFQA 2QQ1A 1MKZA 2X3LA 4NWOA 4UOCA 2NQQA 2NQRA 1O8QA 4TWGA 1G8RA 2NQMA 3MCIA 4LHBA 4CTAB 2NRSA
chains in the Genus database with same CATH topology
4TK1A 5ERVA 1IHCA 2G4RA 2NQSA 2G2CA 5D8HB 5ERUA 1O8OA 2F7YA 4CTAA 2PBQA 2NROA 4PD0A 5ERQA 4U91A 2NQNA 1UUYA 3MCHA 2IS8A 1DI6A 1EAVA 4TK4A 5ERSA 4TK3A 2NQUA 1R2KA 2NRPA 1XI8A 1I6VD 1JLJA 5D6GA 4CT8A 3MCJA 3OI9A 1G8LA 2FTSA 5G2SA 2F7WA 2NQKA 5ERTA 2FU3A 3KBQA 3K6AA 3IWTA 1Y5EA 2NQVA 5ERRA 1FC5A 3JSYA 1O8NA 4UUXA 5G2RA 1IW7D 4UUWA 1DI7A 1UZ5A 4U90A 3TCRA 4XCWA 4PD1A 1WU2A 1HQMD 1T3EA 1UUXA 3PZYA 4CT9A 4NWBA 3RFQA 2QQ1A 1MKZA 2X3LA 4NWOA 4UOCA 2NQQA 2NQRA 1O8QA 4TWGA 1G8RA 2NQMA 3MCIA 4LHBA 4CTAB 2NRSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4TK1 A;  5ERV A;  1IHC A;  2G4R A;  2NQS A;  2G2C A;  5ERU A;  1O8O A;  2F7Y A;  4CTA A;  2PBQ A;  2NRO A;  4PD0 A;  5ERQ A;  4U91 A;  2NQN A;  1UUY A;  3MCH A;  2IS8 A;  1DI6 A;  1EAV A;  4TK4 A;  5ERS A;  4TK3 A;  2NQU A;  1R2K A;  2NRP A;  1XI8 A;  1JLJ A;  4CT8 A;  3MCJ A;  3OI9 A;  1G8L A;  2FTS A;  5G2S A;  2F7W A;  2NQK A;  5ERT A;  2FU3 A;  3KBQ A;  3K6A A;  3IWT A;  1Y5E A;  2NQV A;  5ERR A;  1FC5 A;  1O8N A;  4UUX A;  5G2R A;  4UUW A;  1DI7 A;  1UZ5 A;  4U90 A;  3TCR A;  4XCW A;  4PD1 A;  1WU2 A;  1T3E A;  1UUX A;  3PZY A;  4CT9 A;  3RFQ A;  2QQ1 A;  1MKZ A;  2X3L A;  4NWO A;  4UOC A;  2NQQ A;  2NQR A;  1O8Q A;  4TWG A;  1G8R A;  2NQM A;  3MCI A;  4LHB A;  4CTA B;  2NRS A; 
#chains in the Genus database with same CATH topology
 4TK1 A;  1YZY A;  5ERV A;  1IHC A;  2G4R A;  2NQS A;  2G2C A;  5D8H B;  5ERU A;  1O8O A;  2F7Y A;  4CTA A;  2PBQ A;  2NRO A;  4PD0 A;  5DMH A;  5ERQ A;  4U91 A;  2NQN A;  1UUY A;  3MCH A;  2IS8 A;  1DI6 A;  1EAV A;  4TK4 A;  5ERS A;  4TK3 A;  2NQU A;  1R2K A;  2NRP A;  1XI8 A;  1I6V D;  1JLJ A;  5D6G A;  4CT8 A;  3MCJ A;  3OI9 A;  1G8L A;  2FTS A;  5G2S A;  2F7W A;  2NQK A;  5ERT A;  2FU3 A;  3KBQ A;  3K6A A;  3IWT A;  1Y5E A;  3DQQ A;  2NQV A;  5ERR A;  1FC5 A;  3JSY A;  1O8N A;  4UUX A;  5G2R A;  1IW7 D;  4UUW A;  1DI7 A;  1UZ5 A;  4U90 A;  3TCR A;  4XCW A;  4PD1 A;  1WU2 A;  1HQM D;  1T3E A;  1UUX A;  3PZY A;  4CT9 A;  4NWB A;  3RFQ A;  2QQ1 A;  1MKZ A;  2X3L A;  4NWO A;  4UOC A;  2NQQ A;  2NQR A;  1O8Q A;  4TWG A;  1G8R A;  2NQM A;  3MCI A;  4LHB A;  4CTA B;  2NRS A; 
#chains in the Genus database with same CATH homology
 4TK1 A;  5ERV A;  1IHC A;  2G4R A;  2NQS A;  2G2C A;  5D8H B;  5ERU A;  1O8O A;  2F7Y A;  4CTA A;  2PBQ A;  2NRO A;  4PD0 A;  5ERQ A;  4U91 A;  2NQN A;  1UUY A;  3MCH A;  2IS8 A;  1DI6 A;  1EAV A;  4TK4 A;  5ERS A;  4TK3 A;  2NQU A;  1R2K A;  2NRP A;  1XI8 A;  1I6V D;  1JLJ A;  5D6G A;  4CT8 A;  3MCJ A;  3OI9 A;  1G8L A;  2FTS A;  5G2S A;  2F7W A;  2NQK A;  5ERT A;  2FU3 A;  3KBQ A;  3K6A A;  3IWT A;  1Y5E A;  2NQV A;  5ERR A;  1FC5 A;  3JSY A;  1O8N A;  4UUX A;  5G2R A;  1IW7 D;  4UUW A;  1DI7 A;  1UZ5 A;  4U90 A;  3TCR A;  4XCW A;  4PD1 A;  1WU2 A;  1HQM D;  1T3E A;  1UUX A;  3PZY A;  4CT9 A;  4NWB A;  3RFQ A;  2QQ1 A;  1MKZ A;  2X3L A;  4NWO A;  4UOC A;  2NQQ A;  2NQR A;  1O8Q A;  4TWG A;  1G8R A;  2NQM A;  3MCI A;  4LHB A;  4CTA B;  2NRS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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