2NSAA

Structures of and interactions between domains of trigger factor from themotoga maritim
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
167
structure length
167
Chain Sequence
EFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVEHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Structures of and interactions between domains of trigger factor from Thermotoga maritima.
pubmed doi rcsb
molecule tags Chaperone
source organism Thermotoga maritima
molecule keywords Trigger factor
total genus 64
structure length 167
sequence length 167
ec nomenclature ec 5.2.1.8: Peptidylprolyl isomerase.
pdb deposition date 2006-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF05698 Trigger_C Bacterial trigger factor protein (TF) C-terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3120.10 Mainly Alpha Orthogonal Bundle Trigger factor, domain 2 Trigger factor, C-terminal domain 2nsaA00
2MLXA 3GTYX 1ZXJA 2MLYA 1T11A 2MLZA 3GU0A 2NSAA 1W26A
chains in the Genus database with same CATH superfamily
2MLXA 3GTYX 1ZXJA 2MLYA 1T11A 2MLZA 3GU0A 2NSAA 1W26A
chains in the Genus database with same CATH topology
2MLXA 3GTYX 1ZXJA 2MLYA 1T11A 2MLZA 3GU0A 2NSAA 1W26A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MLX A;  3GTY X;  1ZXJ A;  2MLY A;  1T11 A;  2MLZ A;  3GU0 A;  2NSA A;  1W26 A; 
#chains in the Genus database with same CATH topology
 2MLX A;  3GTY X;  1ZXJ A;  2MLY A;  1T11 A;  2MLZ A;  3GU0 A;  2NSA A;  1W26 A; 
#chains in the Genus database with same CATH homology
 2MLX A;  3GTY X;  1ZXJ A;  2MLY A;  1T11 A;  2MLZ A;  3GU0 A;  2NSA A;  1W26 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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