2NSAA

Structures of and interactions between domains of trigger factor from themotoga maritim
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
167
structure length
167
Chain Sequence
EFETLEQLKESLKKEGKEIYDVEMKESMREQLLEKLPEIVEIEISDRTLEILVNEAINRLKREGRYEQIVSSYESEEKFREELKERILDDIKRDRVIEVLAQEKGISVNDEELEKEAEELAPFWGISPDRAKSLVKARQDLREELRWAILKRKVLDLLLQEVEHHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Chaperone
molecule keywords Trigger factor
publication title Structures of and interactions between domains of trigger factor from Thermotoga maritima.
pubmed doi rcsb
source organism Thermotoga maritima
total genus 64
structure length 167
sequence length 167
ec nomenclature ec 5.2.1.8: Peptidylprolyl isomerase.
pdb deposition date 2006-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF05698 Trigger_C Bacterial trigger factor protein (TF) C-terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.3120.10 Mainly Alpha Orthogonal Bundle Trigger factor, domain 2 Trigger factor, C-terminal domain 2nsaA00
1W26A 2MLYA 2NSAA 1T11A 1ZXJA 3GTYX 2MLZA 2MLXA 3GU0A
chains in the Genus database with same CATH superfamily
1W26A 2MLYA 2NSAA 1T11A 1ZXJA 3GTYX 2MLZA 2MLXA 3GU0A
chains in the Genus database with same CATH topology
1W26A 2MLYA 2NSAA 1T11A 1ZXJA 3GTYX 2MLZA 2MLXA 3GU0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W26 A;  2MLY A;  2NSA A;  1T11 A;  1ZXJ A;  3GTY X;  2MLZ A;  2MLX A;  3GU0 A; 
#chains in the Genus database with same CATH topology
 1W26 A;  2MLY A;  2NSA A;  1T11 A;  1ZXJ A;  3GTY X;  2MLZ A;  2MLX A;  3GU0 A; 
#chains in the Genus database with same CATH homology
 1W26 A;  2MLY A;  2NSA A;  1T11 A;  1ZXJ A;  3GTY X;  2MLZ A;  2MLX A;  3GU0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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