2NVTC

Rna polymerase ii elongation complex in 150 mm mg+2 with gmpcpp
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
267
structure length
267
Chain Sequence
SEEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 5'-R(*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3'
publication title Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
total genus 46
structure length 267
sequence length 267
ec nomenclature
pdb deposition date 2006-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2nvtC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2nvtC01
2CW0A 1TWGC 1TWGK 4QJVA 1WCMC 1WCMK 4BBRC 4OIQA 4BBRK 4A93C 4A93K 1Y1VC 3HKZD 2NVQC 1Y1VK 3HKZL 2NVQK 3S15K 5C3EC 5C3EK 3H0GK 3GTPK 4MEYA 3CQZC 5IYCC 4BXXC 5FLMC 3CQZK 5IYCK 4MEXA 5M5XK 5FLMK 5M3FK 4BXXK 4NOIA 5M5WK 1TWAC 1TWAK 1BDFA 3HOUC 3HOUK 3S1QC 3S1QK 3GTOC 3GTOK 3PO2C 4XLNA 3PO2K 2R93C 2R93K 2E2IC 2E2IK 4XSXA 4LK0A 2PA8D 4C3JC 4C3JK 3DXJA 2PA8L 2A6EA 2WB1D 4QIWD 4QIWL 4A3GC 4A3GK 5TMFA 4G7ZA 2B63C 4X6AC 2B63K 4X6AK 5TMCA 1Y1WC 1IW7A 4C2MC 4C2MK 1Y1WK 3I4MK 4OINA 3S2DC 3S2DK 1R9TC 2WAQD 5IYBC 3GTJC 4MQ9A 2WAQL 5IYBK 3GTJK 4A3EC 2VUMC 4A3EK 4A3FC 4A3FK 2VUMK 4A3IC 4A3IK 4YFKA 4YFXA 4KMUA 4KN4A 2A68A 4JK1A 2E2HC 2E2HK 4Q4ZA 1I3QC 4A3KC 3S14C 4A3CC 2NVYC 3RZOC 2NVYK 4A3KK 3S14K 3HOWC 3HOWK 4A3CK 3M3YC 3GTLC 3GTLK 3M3YK 4C3HC 2JA8C 4C3HK 2JA8K 2R7ZC 2R7ZK 3K7AC 4LJZA 2WB1L 2O5JA 3K7AK 4AYBD 3HOVC 2JA6C 4AYBL 2JA6K 2Y0SD 2NVXC 2Y0SL 2NVXK 5D4DA 3GTGC 3GTGK 1R9TK 4GZYA 3GTKC 2BE5A 3GTKK 5IYDC 2JA7C 1YNNA 2JA7K 3H3VD 5IYDK 4Y52C 4Y52K 1YNJA 4XSZA 4KN7A 3S2HC 4G7OA 3S2HK 1SMYA 3RZDC 3RZDK 2O5IA 3HOZK 2A69A 1I3QK 4A3MC 4A3DC 4A3MK 3HOYC 4BY7C 3HOYK 3RZOK 4XLPA 4BY1C 4YFNA 4C3IC 4C3IK 4BY1K 4LK1A 1HQMA 3HOXC 3HOXK 3WODA 4ZH4A 1ZYRA 5IP7C 4QJVB 5M5YK 3GTMC 3GTMK 3S1RC 3S1RK 4YG2A 3M4OC 3M4OK 5IP9C 5IP9K 3HOVK 2PMZD 3PO3C 2PMZL 1TWHC 4A3BC 3S1NC 3FKIC 4BBSC 1TWHK 3FKIK 3S1NK 3PO3K 4A3BK 4BBSK 3H0GC 4OIPA 3GTPC 4A3JC 2E2JC 3S1MC 4A3JK 5C44C 5C44K 2E2JK 3S1MK 4LLGA 1XPPA 2R92C 2R92K 5C4XC 5C4XK 3H3VL 1SFOC 3I4NC 1SFOK 3I4NK 1I50C 1I50K 5M3MK 1I6VA 3HOZC 2PPBA 3GTQC 3S15C 3GTQK 1K83C 1TWCC 5C4JC 1K83K 1TWCK 5FJ8K 3EQLA 3S16C 5C4JK 3S16K 2JA5C 3S17C 2JA5K 3S17K 1I6HC 1TWFC 1TWFK 4A3DK 4OIRA 4BY7K 4Q5SA 1I6HK 4G7HA 4A3LC 4A3LK 4OIOA 2YU9C 2YU9K 2NVTC 3I4MC 2NVTK 5IP7K 2A6HA 4Y7NC 4Y7NK
chains in the Genus database with same CATH superfamily
1EK8A 4GTLA 1IBAA 3A8KA 4O2DA 3GSIA 5JVGS 4WF9S 1XXBA 4KAWX 2NVQC 2NVQK 3SZZA 5C3EC 5C3EK 1R9TA 4MEYA 5M5XK 2JH3A 4LR2A 3GTKA 3AQPA 1VH2A 5DM6S 1PJ6A 4XLNA 2R93C 2R93K 4PABA 4XSXA 2PA8L 3AD8C 1PJ7A 3ADAC 4A3GC 1I3QA 4A3GK 4GTCA 5TMFA 4GTFA 3CF5S 4KMDA 1BGWA 3N3YA 2WAQL 2Y3PA 4YFXA 4G0WA 4KB4A 5L46A 4JK1A 1KQ4A 1O2BA 5DM7S 2E2HC 3Q3QA 2E2HK 1XXAA 1WOPA 3A8JA 2ZJPS 3RZOC 3M3YC 3GDZA 3M3YK 2JA8C 2JA8K 3S0XA 4M1XA 2R7ZC 2R7ZK 3K7AC 3K7AK 4RMFA 4WFNS 4AYBD 4IOAS 3GTGC 3GTGK 1WOSA 1WCMA 1O27A 4LOWA 3FOEA 3AD9C 1EI6A 5IYDC 5IYDK 1WORA 1YX2A 1YNJA 4XSZA 2KXYA 4KN7A 3S2HC 3S2HK 3GTPA 3RZDC 3RZDK 1J98A 1VRQC 2A69A 4GTAA 4IO9S 4A3DC 4BY7C 1X31C 4P5AA 1HQMA 1WQFA 5M5YK 3BP8C 4KM9A 4YG2A 3HOVK 3ERED 3PO3C 3PO3K 1TWHC 3S1NC 1TWHK 3FKIC 3FKIK 3S1NK 1IE0A 1DCHA 3H0GC 3S1MC 3S1MK 5IOQA 3AQOA 1XPPA 3H3VL 1TWCC 1TWCK 4KMHA 3TTGA 2JA5C 2JA5K 3A8IA 2CFAB 4WJ4A 4OIRA 1INNA 5IORA 5JVHS 3LPXA 2NVTC 2NVTK 2GSUA 5IP7K 2A6HA 4Y7NC 4Y7NK 4GT9A 4OIQA 1DD5A 1XZQA 1Y1VC 3HKZD 1Y1VK 4WFBS 2NVXA 2ZFZA 3CQZC 3CQZK 1PJ5A 5M3FK 4MEXA 3QX3A 2KWAA 5IOTA 5M5WK 1TWAC 1TWAK 2JA7A 4BLAA 4FZBA 3LAPA 2E2IC 2E2IK 4LK0A 4C3JC 4C3JK 4KB2A 2A6EA 4QIWD 1O24A 2XCRB 2B63C 2B63K 4X6AC 4X6AK 1F93A 1IL2A 2GSOA 1AB4A 4PAAA 3L4KA 3GEEA 4G0VA 1R9TC 3GTJC 3GTJK 4A3FC 4A3FK 3AH5A 1EFWA 3PIPS 1L0WA 1FEUA 2ZJQS 3BUEA 4Q4ZA 1I3QC 1WOOA 4A3KC 3S14C 4A3CC 1XXCA 4A3KK 3S14K 4A3CK 3HOWC 3HOWK 4G0UA 3LYWA 1I50A 3TFIA 4C3HC 4C3HK 1K83A 2WB1L 1O2FB 5HQHA 5CJ9A 2JA6C 2JA6K 2Y0SD 4GZYA 1YNNA 3H3VD 4WILA 1F7VA 1SMYA 1WSVA 3HOYC 3HOYK 3RZOK 4AH6A 1JOEA 4BLBA 3HOXC 3HOXK 2R93A 1GE9A 4QJVB 3GTMC 3GTMK 3M4OC 4KASA 3M4OK 2PMZD 4WCES 2ZJRS 4BBSC 4A3BC 4A3BK 4BBSK 2RGRA 4OIPA 3GTPC 5C44C 5C44K 4LLGA 3HXAA 2R92C 2R92K 4WFAS 1SFOC 1SFOK 3GTQC 2XCQA 3GTQK 2FQOA 2E2HA 1BS2A 1TWFC 1TWFK 4A3DK 4BY7K 5HL8A 4G7HA 1O26A 3IPJA 2V6SA 2YU9C 2YU9K 3I4MC 4GTDA 2R7ZA 2CW0A 1TWGC 1TWGK 4DDQA 4QJVA 4BBRC 4BBRK 2ZUFA 2ZUEA 3GTGA 3H0GK 3TFJA 4BXXC 4BXXK 3V4GA 1B4BA 1VLOA 3S1QC 4GFQA 3S1QK 3GTOC 3GTOK 3PO2C 3PO2K 2PA8D 3DXJA 2WB1D 1VJEA 4G7ZA 1Y1WC 1Y1WK 1IW7A 3S2DC 1DCPA 3S2DK 2WAQD 1O28A 2L5NA 4A3EC 2VUMC 5EGHA 4A3EK 2VUMK 4A3IC 4A3IK 1TWHA 3FKIA 4KMUA 5JFEA 1F7UA 3AD7C 3JSTA 1XZPB 1ZXOA 2NVYC 2NVYK 3GTLC 3GTLK 1TWCA 2JA5A 3L4JA 2FQTA 3BP3A 2CFAA 2GAGC 4AYBL 1YCLA 2KQ1A 4KDDA 3PIOS 1R9TK 2RH6A 4XCHA 3OPFA 3SZYA 1JQWA 4KMAA 2P5MA 3GTKC 2BE5A 3GTKK 1Y1VA 1J6XA 4G7OA 3OEPA 4BKWA 3GEHA 3CQZA 1WSRA 4GTBA 1I3QK 2W7VA 4ILDA 4A3MC 4A3MK 1TWAA 1USOA 1WQHA 1ZBSA 3WODA 2E2IA 5TJ3A 2GSNA 3S1RC 3NUHA 3S1RK 1WQGA 2B63A 1C0AA 4FM9A 1O2AA 2L3UA 2E2JC 5E68A 2E2JK 3GTJA 2EBBA 2KPUA 1J6WA 5C4XC 5C4XK 1VGXA 1HI9A 3HOZC 2PPBA 3HOZK 1DCOA 2V6TA 3S16C 1V5VA 3S16K 3S17C 3S17K 3MMLB 1I6HC 1I6HK 1IS1A 4A3LC 4A3LK 5EGEA 3DLLS 3N0BA 3G4AA 4KARA 1WCMC 1WCMK 2JA6A 4A93C 4A93K 4LQYA 3HKZL 3FHZA 3GTPK 5IYCC 5IYCK 5FLMC 5FLMK 1B4AA 4IOCS 4C45A 4NOIA 1BDFA 3HOUC 3HOUK 3GEIA 3N0CA 1O25A 4QIWL 3TFHA 5TMCA 4C2MC 4C2MK 3I4MK 4OINA 1F9NA 1BJTA 5IYBC 5IYBK 3GTMA 4MQ9A 3OREA 4YFKA 4KN4A 2A68A 3T02A 4KM8A 2R92A 1SFOA 3GTQA 1ZQ1C 5HL7S 4LJZA 2O5JA 1TWFA 1XZQB 4GTEA 3HOVC 1UV7A 3T01A 1JVIA 1O29A 2PHCB 2NVXC 2Y0SL 2P8TA 1USMA 3FOFA 5D4DA 4P5BA 2NVXK 4KATA 2YU9A 1IQ0A 1TWGA 4J3NA 4U67S 2JA7C 2JA7K 4Y52C 4Y52K 3H0GA 2O5IA 1G51A 3CAGA 4XLPA 4BY1C 4YFNA 4C3IC 4C3IK 3VA7A 4LK1A 4BY1K 3GTOA 1ZVUA 4ZH4A 2GAHC 1ZYRA 5IP7C 1WIHA 1EH1A 5IP9C 5IP9K 5CHPA 2PMZL 1Y1WA 5IOSA 1EQRA 4A3JC 4A3JK 1ISEA 2VUMA 4WJ3M 3I4NC 3I4NK 1I50C 1I50K 5M3MK 1I6VA 3S15C 3S15K 1K83C 5C4JC 1K83K 5FJ8K 5C4JK 3G4CA 3EQLA 3T00A 1XZPA 2D6FC 3GIRA 4Q5SA 2V6UA 2XCOA 5JVOA 2NVYA 1J6VA 4OIOA 3LAJA 4P9SA 3GTLA 1RU0A 4KC6A
chains in the Genus database with same CATH topology
2CW0A 1TWGC 1TWGK 4QJVA 1WCMC 1WCMK 4BBRC 4OIQA 4BBRK 4A93C 4A93K 1Y1VC 3HKZD 2NVQC 1Y1VK 3HKZL 2NVQK 3S15K 5C3EC 5C3EK 3H0GK 3GTPK 4MEYA 3CQZC 5IYCC 4BXXC 5FLMC 3CQZK 5IYCK 4MEXA 5M5XK 5FLMK 5M3FK 4BXXK 4NOIA 5M5WK 1TWAC 1TWAK 1BDFA 3HOUC 3HOUK 3S1QC 3S1QK 3GTOC 3GTOK 3PO2C 4XLNA 3PO2K 2R93C 2R93K 2E2IC 2E2IK 4XSXA 4LK0A 2PA8D 4C3JC 4C3JK 3DXJA 2PA8L 2A6EA 2WB1D 4QIWD 4QIWL 4A3GC 4A3GK 5TMFA 4G7ZA 2B63C 4X6AC 2B63K 4X6AK 5TMCA 1Y1WC 1IW7A 4C2MC 4C2MK 1Y1WK 3I4MK 4OINA 3S2DC 3S2DK 1R9TC 2WAQD 5IYBC 3GTJC 4MQ9A 2WAQL 5IYBK 3GTJK 4A3EC 2VUMC 4A3EK 4A3FC 4A3FK 2VUMK 4A3IC 4A3IK 4YFKA 4YFXA 4KMUA 4KN4A 2A68A 4JK1A 2E2HC 2E2HK 4Q4ZA 1I3QC 4A3KC 3S14C 4A3CC 2NVYC 3RZOC 2NVYK 4A3KK 3S14K 3HOWC 3HOWK 4A3CK 3M3YC 3GTLC 3GTLK 3M3YK 4C3HC 2JA8C 4C3HK 2JA8K 2R7ZC 2R7ZK 3K7AC 4LJZA 2WB1L 2O5JA 3K7AK 4AYBD 3HOVC 2JA6C 4AYBL 2JA6K 2Y0SD 2NVXC 2Y0SL 2NVXK 5D4DA 3GTGC 3GTGK 1R9TK 4GZYA 3GTKC 2BE5A 3GTKK 5IYDC 2JA7C 1YNNA 2JA7K 3H3VD 5IYDK 4Y52C 4Y52K 1YNJA 4XSZA 4KN7A 3S2HC 4G7OA 3S2HK 1SMYA 3RZDC 3RZDK 2O5IA 3HOZK 2A69A 1I3QK 4A3MC 4A3DC 4A3MK 3HOYC 4BY7C 3HOYK 3RZOK 4XLPA 4BY1C 4YFNA 4C3IC 4C3IK 4BY1K 4LK1A 1HQMA 3HOXC 3HOXK 3WODA 4ZH4A 1ZYRA 5IP7C 4QJVB 5M5YK 3GTMC 3GTMK 3S1RC 3S1RK 4YG2A 3M4OC 3M4OK 5IP9C 5IP9K 3HOVK 2PMZD 3PO3C 2PMZL 1TWHC 4A3BC 3S1NC 3FKIC 4BBSC 1TWHK 3FKIK 3S1NK 3PO3K 4A3BK 4BBSK 3H0GC 4OIPA 3GTPC 4A3JC 2E2JC 3S1MC 4A3JK 5C44C 5C44K 2E2JK 3S1MK 4LLGA 1XPPA 2R92C 2R92K 5C4XC 5C4XK 3H3VL 1SFOC 3I4NC 1SFOK 3I4NK 1I50C 1I50K 5M3MK 1I6VA 3HOZC 2PPBA 3GTQC 3S15C 3GTQK 1K83C 1TWCC 5C4JC 1K83K 1TWCK 5FJ8K 3EQLA 3S16C 5C4JK 3S16K 2JA5C 3S17C 2JA5K 3S17K 1I6HC 1TWFC 1TWFK 4A3DK 4OIRA 4BY7K 4Q5SA 1I6HK 4G7HA 4A3LC 4A3LK 4OIOA 2YU9C 2YU9K 2NVTC 3I4MC 2NVTK 5IP7K 2A6HA 4Y7NC 4Y7NK
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CW0 A;  1TWG C;  1TWG K;  4QJV A;  1WCM C;  1WCM K;  4BBR C;  4OIQ A;  4BBR K;  4A93 C;  4A93 K;  1Y1V C;  3HKZ D;  2NVQ C;  1Y1V K;  3HKZ L;  2NVQ K;  3S15 K;  5C3E C;  5C3E K;  3H0G K;  3GTP K;  4MEY A;  3CQZ C;  5IYC C;  4BXX C;  5FLM C;  3CQZ K;  5IYC K;  4MEX A;  5M5X K;  5FLM K;  5M3F K;  4BXX K;  4NOI A;  5M5W K;  1TWA C;  1TWA K;  1BDF A;  3HOU C;  3HOU K;  3S1Q C;  3S1Q K;  3GTO C;  3GTO K;  3PO2 C;  4XLN A;  3PO2 K;  2R93 C;  2R93 K;  2E2I C;  2E2I K;  4XSX A;  4LK0 A;  2PA8 D;  4C3J C;  4C3J K;  3DXJ A;  2PA8 L;  2A6E A;  2WB1 D;  4QIW D;  4QIW L;  4A3G C;  4A3G K;  5TMF A;  4G7Z A;  2B63 C;  4X6A C;  2B63 K;  4X6A K;  5TMC A;  1Y1W C;  1IW7 A;  4C2M C;  4C2M K;  1Y1W K;  3I4M K;  4OIN A;  3S2D C;  3S2D K;  1R9T C;  2WAQ D;  5IYB C;  3GTJ C;  4MQ9 A;  2WAQ L;  5IYB K;  3GTJ K;  4A3E C;  2VUM C;  4A3E K;  4A3F C;  4A3F K;  2VUM K;  4A3I C;  4A3I K;  4YFK A;  4YFX A;  4KMU A;  4KN4 A;  2A68 A;  4JK1 A;  2E2H C;  2E2H K;  4Q4Z A;  1I3Q C;  4A3K C;  3S14 C;  4A3C C;  2NVY C;  3RZO C;  2NVY K;  4A3K K;  3S14 K;  3HOW C;  3HOW K;  4A3C K;  3M3Y C;  3GTL C;  3GTL K;  3M3Y K;  4C3H C;  2JA8 C;  4C3H K;  2JA8 K;  2R7Z C;  2R7Z K;  3K7A C;  4LJZ A;  2WB1 L;  2O5J A;  3K7A K;  4AYB D;  3HOV C;  2JA6 C;  4AYB L;  2JA6 K;  2Y0S D;  2NVX C;  2Y0S L;  2NVX K;  5D4D A;  3GTG C;  3GTG K;  1R9T K;  4GZY A;  3GTK C;  2BE5 A;  3GTK K;  5IYD C;  2JA7 C;  1YNN A;  2JA7 K;  3H3V D;  5IYD K;  4Y52 C;  4Y52 K;  1YNJ A;  4XSZ A;  4KN7 A;  3S2H C;  4G7O A;  3S2H K;  1SMY A;  3RZD C;  3RZD K;  2O5I A;  3HOZ K;  2A69 A;  1I3Q K;  4A3M C;  4A3D C;  4A3M K;  3HOY C;  4BY7 C;  3HOY K;  3RZO K;  4XLP A;  4BY1 C;  4YFN A;  4C3I C;  4C3I K;  4BY1 K;  4LK1 A;  1HQM A;  3HOX C;  3HOX K;  3WOD A;  4ZH4 A;  1ZYR A;  5IP7 C;  4QJV B;  5M5Y K;  3GTM C;  3GTM K;  3S1R C;  3S1R K;  4YG2 A;  3M4O C;  3M4O K;  5IP9 C;  5IP9 K;  3HOV K;  2PMZ D;  3PO3 C;  2PMZ L;  1TWH C;  4A3B C;  3S1N C;  3FKI C;  4BBS C;  1TWH K;  3FKI K;  3S1N K;  3PO3 K;  4A3B K;  4BBS K;  3H0G C;  4OIP A;  3GTP C;  4A3J C;  2E2J C;  3S1M C;  4A3J K;  5C44 C;  5C44 K;  2E2J K;  3S1M K;  4LLG A;  1XPP A;  2R92 C;  2R92 K;  5C4X C;  5C4X K;  3H3V L;  1SFO C;  3I4N C;  1SFO K;  3I4N K;  1I50 C;  1I50 K;  5M3M K;  1I6V A;  3HOZ C;  2PPB A;  3GTQ C;  3S15 C;  3GTQ K;  1K83 C;  1TWC C;  5C4J C;  1K83 K;  1TWC K;  5FJ8 K;  3EQL A;  3S16 C;  5C4J K;  3S16 K;  2JA5 C;  3S17 C;  2JA5 K;  3S17 K;  1I6H C;  1TWF C;  1TWF K;  4A3D K;  4OIR A;  4BY7 K;  4Q5S A;  1I6H K;  4G7H A;  4A3L C;  4A3L K;  4OIO A;  2YU9 C;  2YU9 K;  2NVT C;  3I4M C;  2NVT K;  5IP7 K;  2A6H A;  4Y7N C;  4Y7N K; 
#chains in the Genus database with same CATH topology
 1EK8 A;  4GTL A;  1IBA A;  3A8K A;  4O2D A;  3GSI A;  5JVG S;  4WF9 S;  1XXB A;  4KAW X;  2NVQ C;  2NVQ K;  3SZZ A;  5C3E C;  5C3E K;  1R9T A;  4MEY A;  5M5X K;  2JH3 A;  4LR2 A;  3GTK A;  3AQP A;  1VH2 A;  5DM6 S;  1PJ6 A;  4XLN A;  2R93 C;  2R93 K;  4PAB A;  4XSX A;  2PA8 L;  3AD8 C;  1PJ7 A;  3ADA C;  4A3G C;  1I3Q A;  4A3G K;  4GTC A;  5TMF A;  4GTF A;  3CF5 S;  4KMD A;  1BGW A;  3N3Y A;  2WAQ L;  2Y3P A;  4YFX A;  4G0W A;  4KB4 A;  5L46 A;  4JK1 A;  1KQ4 A;  1O2B A;  5DM7 S;  2E2H C;  3Q3Q A;  2E2H K;  1XXA A;  1WOP A;  3A8J A;  2ZJP S;  3RZO C;  3M3Y C;  3GDZ A;  3M3Y K;  2JA8 C;  2JA8 K;  3S0X A;  4M1X A;  2R7Z C;  2R7Z K;  3K7A C;  3K7A K;  4RMF A;  4WFN S;  4AYB D;  4IOA S;  3GTG C;  3GTG K;  1WOS A;  1WCM A;  1O27 A;  4LOW A;  3FOE A;  3AD9 C;  1EI6 A;  5IYD C;  5IYD K;  1WOR A;  1YX2 A;  1YNJ A;  4XSZ A;  2KXY A;  4KN7 A;  3S2H C;  3S2H K;  3GTP A;  3RZD C;  3RZD K;  1J98 A;  1VRQ C;  2A69 A;  4GTA A;  4IO9 S;  4A3D C;  4BY7 C;  1X31 C;  4P5A A;  1HQM A;  1WQF A;  5M5Y K;  3BP8 C;  4KM9 A;  4YG2 A;  3HOV K;  3ERE D;  3PO3 C;  3PO3 K;  1TWH C;  3S1N C;  1TWH K;  3FKI C;  3FKI K;  3S1N K;  1IE0 A;  1DCH A;  3H0G C;  3S1M C;  3S1M K;  5IOQ A;  3AQO A;  1XPP A;  3H3V L;  1TWC C;  1TWC K;  4KMH A;  3TTG A;  2JA5 C;  2JA5 K;  3A8I A;  2CFA B;  4WJ4 A;  4OIR A;  1INN A;  5IOR A;  5JVH S;  3LPX A;  2NVT C;  2NVT K;  2GSU A;  5IP7 K;  2A6H A;  4Y7N C;  4Y7N K;  4GT9 A;  4OIQ A;  1DD5 A;  1XZQ A;  1Y1V C;  3HKZ D;  1Y1V K;  4WFB S;  2NVX A;  2ZFZ A;  3CQZ C;  3CQZ K;  1PJ5 A;  5M3F K;  4MEX A;  3QX3 A;  2KWA A;  5IOT A;  5M5W K;  1TWA C;  1TWA K;  2JA7 A;  4BLA A;  4FZB A;  3LAP A;  2E2I C;  2E2I K;  4LK0 A;  4C3J C;  4C3J K;  4KB2 A;  2A6E A;  4QIW D;  1O24 A;  2XCR B;  2B63 C;  2B63 K;  4X6A C;  4X6A K;  1F93 A;  1IL2 A;  2GSO A;  1AB4 A;  4PAA A;  3L4K A;  3GEE A;  4G0V A;  1R9T C;  3GTJ C;  3GTJ K;  4A3F C;  4A3F K;  3AH5 A;  1EFW A;  3PIP S;  1L0W A;  1FEU A;  2ZJQ S;  3BUE A;  4Q4Z A;  1I3Q C;  1WOO A;  4A3K C;  3S14 C;  4A3C C;  1XXC A;  4A3K K;  3S14 K;  4A3C K;  3HOW C;  3HOW K;  4G0U A;  3LYW A;  1I50 A;  3TFI A;  4C3H C;  4C3H K;  1K83 A;  2WB1 L;  1O2F B;  5HQH A;  5CJ9 A;  2JA6 C;  2JA6 K;  2Y0S D;  4GZY A;  1YNN A;  3H3V D;  4WIL A;  1F7V A;  1SMY A;  1WSV A;  3HOY C;  3HOY K;  3RZO K;  4AH6 A;  1JOE A;  4BLB A;  3HOX C;  3HOX K;  2R93 A;  1GE9 A;  4QJV B;  3GTM C;  3GTM K;  3M4O C;  4KAS A;  3M4O K;  2PMZ D;  4WCE S;  2ZJR S;  4BBS C;  4A3B C;  4A3B K;  4BBS K;  2RGR A;  4OIP A;  3GTP C;  5C44 C;  5C44 K;  4LLG A;  3HXA A;  2R92 C;  2R92 K;  4WFA S;  1SFO C;  1SFO K;  3GTQ C;  2XCQ A;  3GTQ K;  2FQO A;  2E2H A;  1BS2 A;  1TWF C;  1TWF K;  4A3D K;  4BY7 K;  5HL8 A;  4G7H A;  1O26 A;  3IPJ A;  2V6S A;  2YU9 C;  2YU9 K;  3I4M C;  4GTD A;  2R7Z A;  2CW0 A;  1TWG C;  1TWG K;  4DDQ A;  4QJV A;  4BBR C;  4BBR K;  2ZUF A;  2ZUE A;  3GTG A;  3H0G K;  3TFJ A;  4BXX C;  4BXX K;  3V4G A;  1B4B A;  1VLO A;  3S1Q C;  4GFQ A;  3S1Q K;  3GTO C;  3GTO K;  3PO2 C;  3PO2 K;  2PA8 D;  3DXJ A;  2WB1 D;  1VJE A;  4G7Z A;  1Y1W C;  1Y1W K;  1IW7 A;  3S2D C;  1DCP A;  3S2D K;  2WAQ D;  1O28 A;  2L5N A;  4A3E C;  2VUM C;  5EGH A;  4A3E K;  2VUM K;  4A3I C;  4A3I K;  1TWH A;  3FKI A;  4KMU A;  5JFE A;  1F7U A;  3AD7 C;  3JST A;  1XZP B;  1ZXO A;  2NVY C;  2NVY K;  3GTL C;  3GTL K;  1TWC A;  2JA5 A;  3L4J A;  2FQT A;  3BP3 A;  2CFA A;  2GAG C;  4AYB L;  1YCL A;  2KQ1 A;  4KDD A;  3PIO S;  1R9T K;  2RH6 A;  4XCH A;  3OPF A;  3SZY A;  1JQW A;  4KMA A;  2P5M A;  3GTK C;  2BE5 A;  3GTK K;  1Y1V A;  1J6X A;  4G7O A;  3OEP A;  4BKW A;  3GEH A;  3CQZ A;  1WSR A;  4GTB A;  1I3Q K;  2W7V A;  4ILD A;  4A3M C;  4A3M K;  1TWA A;  1USO A;  1WQH A;  1ZBS A;  3WOD A;  2E2I A;  5TJ3 A;  2GSN A;  3S1R C;  3NUH A;  3S1R K;  1WQG A;  2B63 A;  1C0A A;  4FM9 A;  1O2A A;  2L3U A;  2E2J C;  5E68 A;  2E2J K;  3GTJ A;  2EBB A;  2KPU A;  1J6W A;  5C4X C;  5C4X K;  1VGX A;  1HI9 A;  3HOZ C;  2PPB A;  3HOZ K;  1DCO A;  2V6T A;  3S16 C;  1V5V A;  3S16 K;  3S17 C;  3S17 K;  3MML B;  1I6H C;  1I6H K;  1IS1 A;  4A3L C;  4A3L K;  5EGE A;  3DLL S;  3N0B A;  3G4A A;  4KAR A;  1WCM C;  1WCM K;  2JA6 A;  4A93 C;  4A93 K;  4LQY A;  3HKZ L;  3FHZ A;  3GTP K;  5IYC C;  5IYC K;  5FLM C;  5FLM K;  1B4A A;  4IOC S;  4C45 A;  4NOI A;  1BDF A;  3HOU C;  3HOU K;  3GEI A;  3N0C A;  1O25 A;  4QIW L;  3TFH A;  5TMC A;  4C2M C;  4C2M K;  3I4M K;  4OIN A;  1F9N A;  1BJT A;  5IYB C;  5IYB K;  3GTM A;  4MQ9 A;  3ORE A;  4YFK A;  4KN4 A;  2A68 A;  3T02 A;  4KM8 A;  2R92 A;  1SFO A;  3GTQ A;  1ZQ1 C;  5HL7 S;  4LJZ A;  2O5J A;  1TWF A;  1XZQ B;  4GTE A;  3HOV C;  1UV7 A;  3T01 A;  1JVI A;  1O29 A;  2PHC B;  2NVX C;  2Y0S L;  2P8T A;  1USM A;  3FOF A;  5D4D A;  4P5B A;  2NVX K;  4KAT A;  2YU9 A;  1IQ0 A;  1TWG A;  4J3N A;  4U67 S;  2JA7 C;  2JA7 K;  4Y52 C;  4Y52 K;  3H0G A;  2O5I A;  1G51 A;  3CAG A;  4XLP A;  4BY1 C;  4YFN A;  4C3I C;  4C3I K;  3VA7 A;  4LK1 A;  4BY1 K;  3GTO A;  1ZVU A;  4ZH4 A;  2GAH C;  1ZYR A;  5IP7 C;  1WIH A;  1EH1 A;  5IP9 C;  5IP9 K;  5CHP A;  2PMZ L;  1Y1W A;  5IOS A;  1EQR A;  4A3J C;  4A3J K;  1ISE A;  2VUM A;  4WJ3 M;  3I4N C;  3I4N K;  1I50 C;  1I50 K;  5M3M K;  1I6V A;  3S15 C;  3S15 K;  1K83 C;  5C4J C;  1K83 K;  5FJ8 K;  5C4J K;  3G4C A;  3EQL A;  3T00 A;  1XZP A;  2D6F C;  3GIR A;  4Q5S A;  2V6U A;  2XCO A;  5JVO A;  2NVY A;  1J6V A;  4OIO A;  3LAJ A;  4P9S A;  3GTL A;  1RU0 A;  4KC6 A; 
#chains in the Genus database with same CATH homology
 2CW0 A;  1TWG C;  1TWG K;  4QJV A;  1WCM C;  1WCM K;  4BBR C;  4OIQ A;  4BBR K;  4A93 C;  4A93 K;  1Y1V C;  3HKZ D;  2NVQ C;  1Y1V K;  3HKZ L;  2NVQ K;  3S15 K;  5C3E C;  5C3E K;  3H0G K;  3GTP K;  4MEY A;  3CQZ C;  5IYC C;  4BXX C;  5FLM C;  3CQZ K;  5IYC K;  4MEX A;  5M5X K;  5FLM K;  5M3F K;  4BXX K;  4NOI A;  5M5W K;  1TWA C;  1TWA K;  1BDF A;  3HOU C;  3HOU K;  3S1Q C;  3S1Q K;  3GTO C;  3GTO K;  3PO2 C;  4XLN A;  3PO2 K;  2R93 C;  2R93 K;  2E2I C;  2E2I K;  4XSX A;  4LK0 A;  2PA8 D;  4C3J C;  4C3J K;  3DXJ A;  2PA8 L;  2A6E A;  2WB1 D;  4QIW D;  4QIW L;  4A3G C;  4A3G K;  5TMF A;  4G7Z A;  2B63 C;  4X6A C;  2B63 K;  4X6A K;  5TMC A;  1Y1W C;  1IW7 A;  4C2M C;  4C2M K;  1Y1W K;  3I4M K;  4OIN A;  3S2D C;  3S2D K;  1R9T C;  2WAQ D;  5IYB C;  3GTJ C;  4MQ9 A;  2WAQ L;  5IYB K;  3GTJ K;  4A3E C;  2VUM C;  4A3E K;  4A3F C;  4A3F K;  2VUM K;  4A3I C;  4A3I K;  4YFK A;  4YFX A;  4KMU A;  4KN4 A;  2A68 A;  4JK1 A;  2E2H C;  2E2H K;  4Q4Z A;  1I3Q C;  4A3K C;  3S14 C;  4A3C C;  2NVY C;  3RZO C;  2NVY K;  4A3K K;  3S14 K;  3HOW C;  3HOW K;  4A3C K;  3M3Y C;  3GTL C;  3GTL K;  3M3Y K;  4C3H C;  2JA8 C;  4C3H K;  2JA8 K;  2R7Z C;  2R7Z K;  3K7A C;  4LJZ A;  2WB1 L;  2O5J A;  3K7A K;  4AYB D;  3HOV C;  2JA6 C;  4AYB L;  2JA6 K;  2Y0S D;  2NVX C;  2Y0S L;  2NVX K;  5D4D A;  3GTG C;  3GTG K;  1R9T K;  4GZY A;  3GTK C;  2BE5 A;  3GTK K;  5IYD C;  2JA7 C;  1YNN A;  2JA7 K;  3H3V D;  5IYD K;  4Y52 C;  4Y52 K;  1YNJ A;  4XSZ A;  4KN7 A;  3S2H C;  4G7O A;  3S2H K;  1SMY A;  3RZD C;  3RZD K;  2O5I A;  3HOZ K;  2A69 A;  1I3Q K;  4A3M C;  4A3D C;  4A3M K;  3HOY C;  4BY7 C;  3HOY K;  3RZO K;  4XLP A;  4BY1 C;  4YFN A;  4C3I C;  4C3I K;  4BY1 K;  4LK1 A;  1HQM A;  3HOX C;  3HOX K;  3WOD A;  4ZH4 A;  1ZYR A;  5IP7 C;  4QJV B;  5M5Y K;  3GTM C;  3GTM K;  3S1R C;  3S1R K;  4YG2 A;  3M4O C;  3M4O K;  5IP9 C;  5IP9 K;  3HOV K;  2PMZ D;  3PO3 C;  2PMZ L;  1TWH C;  4A3B C;  3S1N C;  3FKI C;  4BBS C;  1TWH K;  3FKI K;  3S1N K;  3PO3 K;  4A3B K;  4BBS K;  3H0G C;  4OIP A;  3GTP C;  4A3J C;  2E2J C;  3S1M C;  4A3J K;  5C44 C;  5C44 K;  2E2J K;  3S1M K;  4LLG A;  1XPP A;  2R92 C;  2R92 K;  5C4X C;  5C4X K;  3H3V L;  1SFO C;  3I4N C;  1SFO K;  3I4N K;  1I50 C;  1I50 K;  5M3M K;  1I6V A;  3HOZ C;  2PPB A;  3GTQ C;  3S15 C;  3GTQ K;  1K83 C;  1TWC C;  5C4J C;  1K83 K;  1TWC K;  5FJ8 K;  3EQL A;  3S16 C;  5C4J K;  3S16 K;  2JA5 C;  3S17 C;  2JA5 K;  3S17 K;  1I6H C;  1TWF C;  1TWF K;  4A3D K;  4OIR A;  4BY7 K;  4Q5S A;  1I6H K;  4G7H A;  4A3L C;  4A3L K;  4OIO A;  2YU9 C;  2YU9 K;  2NVT C;  3I4M C;  2NVT K;  5IP7 K;  2A6H A;  4Y7N C;  4Y7N K; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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