2NVXC

Rna polymerase ii elongation complex in 5 mm mg+2 with 2'-dutp
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
266
structure length
266
Chain Sequence
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEYSRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVSNLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKGIAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWPQSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQVVVRGIDTLQKKVASILLALTQMDQD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis
pubmed doi rcsb
molecule tags Transcription,transferase/dna-rna hybrid
molecule keywords 5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3'
total genus 46
structure length 266
sequence length 266
ec nomenclature
pdb deposition date 2006-11-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01000 RNA_pol_A_bac RNA polymerase Rpb3/RpoA insert domain
C PF01193 RNA_pol_L RNA polymerase Rpb3/Rpb11 dimerisation domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.170.120.12 Mainly Beta Beta Complex RNA Polymerase Alpha Subunit; Chain A, domain 2 DNA-directed RNA polymerase, insert domain 2nvxC02
3.30.1360.10 Alpha Beta 2-Layer Sandwich Gyrase A; domain 2 RNA polymerase, RBP11-like subunit 2nvxC01
4ZH4A 5C4XK 3HOVC 2A6HA 4XLNA 3H0GK 4MQ9A 5C4JK 3HOWK 3S2DK 3S2DC 5C44C 3S1QC 4A93K 4C2MC 4C3HK 4A3GK 5IYDC 4A3JK 1I6VA 2BE5A 2Y0SL 3EQLA 2R93C 4BY1C 4AYBL 2R7ZC 2O5JA 3GTQC 4YFKA 2O5IA 4Y7NK 3RZOK 2NVTK 4OIOA 4OIQA 4BY7C 2WAQL 4A3EC 1I3QC 4A3LK 1TWAK 2VUMK 4A3GC 4C3HC 2JA6C 3FKIC 4C2MK 4JK1A 4BBRC 5C4JC 3HOWC 4X6AC 4A3FK 1TWGK 3S1RC 3M4OC 3GTPC 4C3IK 2R93K 5C4XC 5D4DA 5M5WK 3S1MK 4XSZA 1I50K 2PMZL 2E2JK 5TMFA 4G7OA 3GTMK 4A3CK 1ZYRA 2R92C 5M5XK 2JA7C 3GTOK 3S16K 1YNJA 4Y52C 4QIWD 3S14C 3FKIK 4LLGA 3HOXC 4LJZA 3S15K 4A3LC 4QJVB 4A3EK 2E2IC 5C3EC 4Y7NC 3GTQK 3GTKC 5M3FK 4BY1K 3HOZK 2CW0A 1WCMC 4A3DK 5IYCC 4A3MC 3S2HK 4A3JC 5IYDK 3K7AC 3GTLC 5IP7K 4BXXK 5M3MK 1Y1VC 3RZDK 4XLPA 1TWCC 2A69A 1K83K 2B63K 3HKZD 1SFOC 4A3IC 3M3YC 4A3DC 1WCMK 3HOZC 4C3JK 1R9TK 3S17C 2PA8L 3GTKK 4BY7K 5FLMC 1IW7A 3PO3C 1YNNA 2NVYK 4A3BK 3S15C 1I6HK 3HOXK 3GTJK 5IYBC 1TWHC 4NOIA 4A3KC 3GTGC 3I4MC 4Q5SA 1TWFK 5IP9K 3HOYK 3S14K 4LK1A 3S16C 1TWFC 3HOYC 3GTJC 5TMCA 1TWHK 4YFNA 3I4MK 2WB1L 2JA5C 4A3BC 3HOUK 3PO3K 1HQMA 1Y1WC 4OIPA 2JA8C 2JA8K 3CQZK 4C3IC 4BBSK 3H3VL 3GTPK 4A3IK 3HOUC 2JA5K 1TWGC 4A3FC 2NVXC 4X6AK 4KN4A 1TWCK 3HKZL 1Y1VK 4Q4ZA 2YU9C 4BXXC 5IP7C 4LK0A 3K7AK 4QIWL 3GTLK 1TWAC 2VUMC 1I3QK 4KN7A 4A3KK 5IYBK 5IYCK 3RZOC 1XPPA 2NVYC 2PMZD 2A6EA 1SMYA 3PO2K 3PO2C 2E2IK 3S17K 5M5YK 4C3JC 3M3YK 1R9TC 1SFOK 2WB1D 4A93C 3S1QK 4YG2A 5C44K 1K83C 3RZDC 2B63C 4XSXA 2YU9K 3H0GC 2JA7K 2R92K 2NVXK 3HOVK 5FJ8K 3GTMC 4A3CC 1I50C 2E2JC 3S2HC 4A3MK 4OIRA 2E2HK 3I4NK 3CQZC 4G7ZA 2PA8D 4G7HA 4YFXA 4AYBD 4BBSC 1Y1WK 2NVQC 3I4NC 2Y0SD 5C3EK 3S1RK 3M4OK 4KMUA 1BDFA 3S1NK 4BBRK 4MEXA 4GZYA 2JA6K 3WODA 4MEYA 4QJVA 4Y52K 3S1NC 5IP9C 2PPBA 3GTGK 3GTOC 2NVTC 3H3VD 1I6HC 2NVQK 3DXJA 2WAQD 2R7ZK 3S1MC 2A68A 5FLMK 2E2HC 4OINA
chains in the Genus database with same CATH superfamily
4ZH4A 5C4XK 2A6HA 2B63A 4XLNA 1J6VA 4BKWA 3TFHA 5JVHS 2P8TA 1WCMA 4A3JK 3GTKA 3GTLA 1ZBSA 1G51A 3A8JA 3G4AA 1VGXA 4AH6A 1TWFA 3GTQC 4YFKA 3RZOK 4OIQA 4A3EC 4A3LK 2VUMK 4P5AA 3N3YA 4JK1A 5EGEA 2R92A 5C4XC 3T02A 2PMZL 4A3CK 5TMFA 5HQHA 5DM7S 1USOA 1ZYRA 5M5XK 4LR2A 1FEUA 2ZUEA 4Y52C 3S14C 4LJZA 4WFAS 2E2IC 5C3EC 3GTQK 5IOQA 2R7ZA 4A3MC 4LQYA 2NVXA 3SZZA 2A69A 3H0GA 1V5VA 3M3YC 3QX3A 1YNNA 2NVYK 3HOXK 1EH1A 3GTJK 3I4MC 1TWFK 3S14K 2GSNA 2D6FC 4LK1A 5IORA 1TWFC 3I4MK 2WB1L 2L3UA 1HQMA 1J6WA 2JA8K 2XCOA 1ISEA 3FHZA 5CJ9A 4KN4A 5IP7C 4LK0A 3BP3A 4QIWL 2VUMC 4KN7A 3T00A 5IYBK 2L5NA 2NVYC 1XZPA 3PO2K 1O27A 2E2IK 4KMAA 3M3YK 2WB1D 2B63C 2JA7K 1DCHA 2ZJQS 1IQ0A 1I50C 2E2JC 3S2HC 4G7ZA 3JSTA 2PA8D 2KWAA 1HI9A 1IBAA 5C3EK 1BDFA 1XXCA 5IOSA 4GZYA 3GTJA 4MEYA 5IP9C 3AH5A 3GTGK 2NVTC 4IOAS 1I6HC 4WCES 1TWHA 3I4NC 4BY7C 4WF9S 4ILDA 1L0WA 1R9TA 3S1QC 1XXAA 4KDDA 1Y1VA 2EBBA 1I6VA 2O5JA 2R93K 4OIOA 3AQPA 4C3HC 4KATA 4C2MK 4FM9A 3CAGA 1DCOA 3M4OC 3GTPC 3S0XA 1J6XA 5D4DA 1C0AA 4XSZA 1TWCA 3IPJA 3N0CA 1B4BA 4P5BA 3A8KA 3S16K 4QIWD 1WIHA 3L4KA 3FKIK 3FOFA 3AD9C 3HOXC 1IS1A 4GFQA 3TFIA 3LYWA 4P9SA 1WOSA 1WQFA 2GSOA 4BY1K 1WQHA 2CW0A 5IYCC 1WORA 5IYDK 4IOCS 4KC6A 5M3MK 1Y1VC 1TWCC 4KAWX 1BS2A 1SFOC 4A3IC 3HOZC 1BGWA 4GTFA 3PO3C 3S15C 2GSUA 5JVOA 1TWHC 4NOIA 3OEPA 3HOYC 4M1XA 1UV7A 4YFNA 3HOUK 1Y1WC 3CQZK 4BBSK 3CF5S 2JA5K 4U67S 5L46A 4BXXC 4GTAA 3K7AK 3GTLK 3GIRA 2RGRA 1TWAC 3RZOC 2R93A 2PMZD 1SMYA 5HL8A 3OPFA 3S17K 4C3JC 1R9TC 4YG2A 3AD8C 1O2AA 3DLLS 3RZDC 2YU9K 4KMDA 1ZVUA 5FJ8K 3GTMC 3BUEA 2E2HK 4YFXA 5E68A 3S1RK 4KMUA 3S1NK 1J98A 3MMLB 4MEXA 3WODA 3LPXA 2PPBA 1PJ6A 2NVQK 1EI6A 2CFAB 4OINA 2W7VA 1K83A 3GTPA 5C4JK 3HOWK 3S2DC 5C44C 4GTDA 4RMFA 1F7UA 4A93K 4A3GK 5IYDC 3N0BA 3EQLA 2NVYA 4BY1C 1USMA 4AYBL 2R7ZC 2JH3A 4Y7NK 5IOTA 2WAQL 1YX2A 1I3QC 4LOWA 4XCHA 4A3GC 1JOEA 2JA6C 4BBRC 4WFBS 5C4JC 3HOWC 4X6AC 1WOOA 2GAGC 1O28A 2XCRB 4A3FK 3LAPA 1O24A 4KMHA 2JA5A 5M5WK 3S1MK 3GEIA 3GTMK 2E2HA 3G4CA 2R92C 3GTOK 1Y1WA 4KB2A 3AQOA 4LLGA 2E2IA 5DM6S 3T01A 4Y7NC 1DCPA 4J3NA 4A3DK 1JQWA 1RU0A 4KARA 3K7AC 3GTLC 4BXXK 2V6SA 1XZQB 1EK8A 3FOEA 1K83K 3RZDK 4G0VA 1XZQA 3HKZD 1R9TK 1WCMK 2PA8L 3GTKK 3L4JA 1VRQC 1GE9A 4A3BK 5EGHA 2JA6A 4A3KC 4Q5SA 3GTGC 1WQGA 4PAAA 3TFJA 5TMCA 2JA5C 4A3BC 4WILA 4OIPA 2V6TA 4C3IC 1WSRA 3H3VL 5JVGS 3HOUC 1TWGC 4X6AK 3ADAC 4GTEA 3PIOS 3GTMA 1PJ7A 4Q4ZA 1Y1VK 2YU9C 1I3QK 4A3KK 5IYCK 1XPPA 3FKIA 2A6EA 2GAHC 2VUMA 3GDZA 5M5YK 2ZJPS 4WJ3M 1SFOK 5HL7S 1TWGA 5C44K 1K83C 1B4AA 4XSXA 3H0GC 3OREA 3SZYA 2R92K 3HOVK 4C45A 3CQZC 4BBSC 4G7HA 4PABA 2RH6A 1Y1WK 2Y0SD 4WFNS 2CFAA 3NUHA 4BBRK 2JA6K 4GT9A 2KXYA 4QJVA 1O2BA 3GTOC 2R7ZK 3S1MC 4KASA 2E2HC 3PIPS 2Y3PA 3HOVC 3A8IA 3H0GK 1IE0A 4MQ9A 1PJ5A 3S2DK 2KPUA 4C2MC 4C3HK 3ERED 2BE5A 5TJ3A 1EQRA 2R93C 2Y0SL 3GSIA 4WJ4A 1X31C 2O5IA 2NVTK 1TWAK 3FKIC 1SFOA 1ZQ1C 2PHCB 1TWGK 1VJEA 3TTGA 3S1RC 3CQZA 1BJTA 4C3IK 1I50K 2E2JK 2FQOA 4G7OA 2FQTA 2JA7C 1I3QA 1YNJA 4GTLA 2P5MA 3S15K 4A3LC 4QJVB 4A3EK 3GTGA 3GTKC 4KM9A 5M3FK 1F93A 4KB4A 3HOZK 1WCMC 3S2HK 4A3JC 2YU9A 1JVIA 4KM8A 5IP7K 2JA7A 1VH2A 4BLAA 1IL2A 1YCLA 1EFWA 2B63K 4XLPA 4C3JK 4A3DC 3GEHA 1KQ4A 3S17C 2ZFZA 4BY7K 5FLMC 3BP8C 1IW7A 1O26A 1I6HK 5IYBC 3HOYK 5IP9K 5CHPA 3S16C 1TWHK 3GTJC 1WOPA 3PO3K 1O25A 4FZBA 2JA8C 3GTPK 2ZJRS 1ZXOA 4A3IK 1VLOA 4A3FC 2NVXC 4IO9S 1TWCK 3HKZL 2ZUFA 2XCQA 3GTOA 4G0UA 3LAJA 1XXBA 4G0WA 1WSVA 1XZPB 3PO2C 1TWAA 3VA7A 3AD7C 4GTCA 4A93C 3S1QK 1F7VA 1DD5A 1AB4A 3V4GA 1F9NA 2NVXK 3GEEA 4A3CC 4A3MK 1I50A 4OIRA 2V6UA 1O2FB 3I4NK 3Q3QA 4AYBD 2NVQC 3M4OK 2KQ1A 4GTBA 4O2DA 4DDQA 4Y52K 3S1NC 3GTQA 1O29A 1INNA 3H3VD 5JFEA 3HXAA 3DXJA 2WAQD 4BLBA 2A68A 5FLMK
chains in the Genus database with same CATH topology
4ZH4A 5C4XK 3HOVC 2A6HA 4XLNA 3H0GK 4MQ9A 5C4JK 3HOWK 3S2DK 3S2DC 5C44C 3S1QC 4A93K 4C2MC 4C3HK 4A3GK 5IYDC 4A3JK 1I6VA 2BE5A 2Y0SL 3EQLA 2R93C 4BY1C 4AYBL 2R7ZC 2O5JA 3GTQC 4YFKA 2O5IA 4Y7NK 3RZOK 2NVTK 4OIOA 4OIQA 4BY7C 2WAQL 4A3EC 1I3QC 4A3LK 1TWAK 2VUMK 4A3GC 4C3HC 2JA6C 3FKIC 4C2MK 4JK1A 4BBRC 5C4JC 3HOWC 4X6AC 4A3FK 1TWGK 3S1RC 3M4OC 3GTPC 4C3IK 2R93K 5C4XC 5D4DA 5M5WK 3S1MK 4XSZA 1I50K 2PMZL 2E2JK 5TMFA 4G7OA 3GTMK 4A3CK 1ZYRA 2R92C 5M5XK 2JA7C 3GTOK 3S16K 1YNJA 4Y52C 4QIWD 3S14C 3FKIK 4LLGA 3HOXC 4LJZA 3S15K 4A3LC 4QJVB 4A3EK 2E2IC 5C3EC 4Y7NC 3GTQK 3GTKC 5M3FK 4BY1K 3HOZK 2CW0A 1WCMC 4A3DK 5IYCC 4A3MC 3S2HK 4A3JC 5IYDK 3K7AC 3GTLC 5IP7K 4BXXK 5M3MK 1Y1VC 3RZDK 4XLPA 1TWCC 2A69A 1K83K 2B63K 3HKZD 1SFOC 4A3IC 3M3YC 4A3DC 1WCMK 3HOZC 4C3JK 1R9TK 3S17C 2PA8L 3GTKK 4BY7K 5FLMC 1IW7A 3PO3C 1YNNA 2NVYK 4A3BK 3S15C 1I6HK 3HOXK 3GTJK 5IYBC 1TWHC 4NOIA 4A3KC 3GTGC 3I4MC 4Q5SA 1TWFK 5IP9K 3HOYK 3S14K 4LK1A 3S16C 1TWFC 3HOYC 3GTJC 5TMCA 1TWHK 4YFNA 3I4MK 2WB1L 2JA5C 4A3BC 3HOUK 3PO3K 1HQMA 1Y1WC 4OIPA 2JA8C 2JA8K 3CQZK 4C3IC 4BBSK 3H3VL 3GTPK 4A3IK 3HOUC 2JA5K 1TWGC 4A3FC 2NVXC 4X6AK 4KN4A 1TWCK 3HKZL 1Y1VK 4Q4ZA 2YU9C 4BXXC 5IP7C 4LK0A 3K7AK 4QIWL 3GTLK 1TWAC 2VUMC 1I3QK 4KN7A 4A3KK 5IYBK 5IYCK 3RZOC 1XPPA 2NVYC 2PMZD 2A6EA 1SMYA 3PO2K 3PO2C 2E2IK 3S17K 5M5YK 4C3JC 3M3YK 1R9TC 1SFOK 2WB1D 4A93C 3S1QK 4YG2A 5C44K 1K83C 3RZDC 2B63C 4XSXA 2YU9K 3H0GC 2JA7K 2R92K 2NVXK 3HOVK 5FJ8K 3GTMC 4A3CC 1I50C 2E2JC 3S2HC 4A3MK 4OIRA 2E2HK 3I4NK 3CQZC 4G7ZA 2PA8D 4G7HA 4YFXA 4AYBD 4BBSC 1Y1WK 2NVQC 3I4NC 2Y0SD 5C3EK 3S1RK 3M4OK 4KMUA 1BDFA 3S1NK 4BBRK 4MEXA 4GZYA 2JA6K 3WODA 4MEYA 4QJVA 4Y52K 3S1NC 5IP9C 2PPBA 3GTGK 3GTOC 2NVTC 3H3VD 1I6HC 2NVQK 3DXJA 2WAQD 2R7ZK 3S1MC 2A68A 5FLMK 2E2HC 4OINA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ZH4 A;  5C4X K;  3HOV C;  2A6H A;  4XLN A;  3H0G K;  4MQ9 A;  5C4J K;  3HOW K;  3S2D K;  3S2D C;  5C44 C;  3S1Q C;  4A93 K;  4C2M C;  4C3H K;  4A3G K;  5IYD C;  4A3J K;  1I6V A;  2BE5 A;  2Y0S L;  3EQL A;  2R93 C;  4BY1 C;  4AYB L;  2R7Z C;  2O5J A;  3GTQ C;  4YFK A;  2O5I A;  4Y7N K;  3RZO K;  2NVT K;  4OIO A;  4OIQ A;  4BY7 C;  2WAQ L;  4A3E C;  1I3Q C;  4A3L K;  1TWA K;  2VUM K;  4A3G C;  4C3H C;  2JA6 C;  3FKI C;  4C2M K;  4JK1 A;  4BBR C;  5C4J C;  3HOW C;  4X6A C;  4A3F K;  1TWG K;  3S1R C;  3M4O C;  3GTP C;  4C3I K;  2R93 K;  5C4X C;  5D4D A;  5M5W K;  3S1M K;  4XSZ A;  1I50 K;  2PMZ L;  2E2J K;  5TMF A;  4G7O A;  3GTM K;  4A3C K;  1ZYR A;  2R92 C;  5M5X K;  2JA7 C;  3GTO K;  3S16 K;  1YNJ A;  4Y52 C;  4QIW D;  3S14 C;  3FKI K;  4LLG A;  3HOX C;  4LJZ A;  3S15 K;  4A3L C;  4QJV B;  4A3E K;  2E2I C;  5C3E C;  4Y7N C;  3GTQ K;  3GTK C;  5M3F K;  4BY1 K;  3HOZ K;  2CW0 A;  1WCM C;  4A3D K;  5IYC C;  4A3M C;  3S2H K;  4A3J C;  5IYD K;  3K7A C;  3GTL C;  5IP7 K;  4BXX K;  5M3M K;  1Y1V C;  3RZD K;  4XLP A;  1TWC C;  2A69 A;  1K83 K;  2B63 K;  3HKZ D;  1SFO C;  4A3I C;  3M3Y C;  4A3D C;  1WCM K;  3HOZ C;  4C3J K;  1R9T K;  3S17 C;  2PA8 L;  3GTK K;  4BY7 K;  5FLM C;  1IW7 A;  3PO3 C;  1YNN A;  2NVY K;  4A3B K;  3S15 C;  1I6H K;  3HOX K;  3GTJ K;  5IYB C;  1TWH C;  4NOI A;  4A3K C;  3GTG C;  3I4M C;  4Q5S A;  1TWF K;  5IP9 K;  3HOY K;  3S14 K;  4LK1 A;  3S16 C;  1TWF C;  3HOY C;  3GTJ C;  5TMC A;  1TWH K;  4YFN A;  3I4M K;  2WB1 L;  2JA5 C;  4A3B C;  3HOU K;  3PO3 K;  1HQM A;  1Y1W C;  4OIP A;  2JA8 C;  2JA8 K;  3CQZ K;  4C3I C;  4BBS K;  3H3V L;  3GTP K;  4A3I K;  3HOU C;  2JA5 K;  1TWG C;  4A3F C;  2NVX C;  4X6A K;  4KN4 A;  1TWC K;  3HKZ L;  1Y1V K;  4Q4Z A;  2YU9 C;  4BXX C;  5IP7 C;  4LK0 A;  3K7A K;  4QIW L;  3GTL K;  1TWA C;  2VUM C;  1I3Q K;  4KN7 A;  4A3K K;  5IYB K;  5IYC K;  3RZO C;  1XPP A;  2NVY C;  2PMZ D;  2A6E A;  1SMY A;  3PO2 K;  3PO2 C;  2E2I K;  3S17 K;  5M5Y K;  4C3J C;  3M3Y K;  1R9T C;  1SFO K;  2WB1 D;  4A93 C;  3S1Q K;  4YG2 A;  5C44 K;  1K83 C;  3RZD C;  2B63 C;  4XSX A;  2YU9 K;  3H0G C;  2JA7 K;  2R92 K;  2NVX K;  3HOV K;  5FJ8 K;  3GTM C;  4A3C C;  1I50 C;  2E2J C;  3S2H C;  4A3M K;  4OIR A;  2E2H K;  3I4N K;  3CQZ C;  4G7Z A;  2PA8 D;  4G7H A;  4YFX A;  4AYB D;  4BBS C;  1Y1W K;  2NVQ C;  3I4N C;  2Y0S D;  5C3E K;  3S1R K;  3M4O K;  4KMU A;  1BDF A;  3S1N K;  4BBR K;  4MEX A;  4GZY A;  2JA6 K;  3WOD A;  4MEY A;  4QJV A;  4Y52 K;  3S1N C;  5IP9 C;  2PPB A;  3GTG K;  3GTO C;  2NVT C;  3H3V D;  1I6H C;  2NVQ K;  3DXJ A;  2WAQ D;  2R7Z K;  3S1M C;  2A68 A;  5FLM K;  2E2H C;  4OIN A; 
#chains in the Genus database with same CATH topology
 4ZH4 A;  5C4X K;  2A6H A;  2B63 A;  4XLN A;  1J6V A;  4BKW A;  3TFH A;  5JVH S;  2P8T A;  1WCM A;  4A3J K;  3GTK A;  3GTL A;  1ZBS A;  1G51 A;  3A8J A;  3G4A A;  1VGX A;  4AH6 A;  1TWF A;  3GTQ C;  4YFK A;  3RZO K;  4OIQ A;  4A3E C;  4A3L K;  2VUM K;  4P5A A;  3N3Y A;  4JK1 A;  5EGE A;  2R92 A;  5C4X C;  3T02 A;  2PMZ L;  4A3C K;  5TMF A;  5HQH A;  5DM7 S;  1USO A;  1ZYR A;  5M5X K;  4LR2 A;  1FEU A;  2ZUE A;  4Y52 C;  3S14 C;  4LJZ A;  4WFA S;  2E2I C;  5C3E C;  3GTQ K;  5IOQ A;  2R7Z A;  4A3M C;  4LQY A;  2NVX A;  3SZZ A;  2A69 A;  3H0G A;  1V5V A;  3M3Y C;  3QX3 A;  1YNN A;  2NVY K;  3HOX K;  1EH1 A;  3GTJ K;  3I4M C;  1TWF K;  3S14 K;  2GSN A;  2D6F C;  4LK1 A;  5IOR A;  1TWF C;  3I4M K;  2WB1 L;  2L3U A;  1HQM A;  1J6W A;  2JA8 K;  2XCO A;  1ISE A;  3FHZ A;  5CJ9 A;  4KN4 A;  5IP7 C;  4LK0 A;  3BP3 A;  4QIW L;  2VUM C;  4KN7 A;  3T00 A;  5IYB K;  2L5N A;  2NVY C;  1XZP A;  3PO2 K;  1O27 A;  2E2I K;  4KMA A;  3M3Y K;  2WB1 D;  2B63 C;  2JA7 K;  1DCH A;  2ZJQ S;  1IQ0 A;  1I50 C;  2E2J C;  3S2H C;  4G7Z A;  3JST A;  2PA8 D;  2KWA A;  1HI9 A;  1IBA A;  5C3E K;  1BDF A;  1XXC A;  5IOS A;  4GZY A;  3GTJ A;  4MEY A;  5IP9 C;  3AH5 A;  3GTG K;  2NVT C;  4IOA S;  1I6H C;  4WCE S;  1TWH A;  3I4N C;  4BY7 C;  4WF9 S;  4ILD A;  1L0W A;  1R9T A;  3S1Q C;  1XXA A;  4KDD A;  1Y1V A;  2EBB A;  1I6V A;  2O5J A;  2R93 K;  4OIO A;  3AQP A;  4C3H C;  4KAT A;  4C2M K;  4FM9 A;  3CAG A;  1DCO A;  3M4O C;  3GTP C;  3S0X A;  1J6X A;  5D4D A;  1C0A A;  4XSZ A;  1TWC A;  3IPJ A;  3N0C A;  1B4B A;  4P5B A;  3A8K A;  3S16 K;  4QIW D;  1WIH A;  3L4K A;  3FKI K;  3FOF A;  3AD9 C;  3HOX C;  1IS1 A;  4GFQ A;  3TFI A;  3LYW A;  4P9S A;  1WOS A;  1WQF A;  2GSO A;  4BY1 K;  1WQH A;  2CW0 A;  5IYC C;  1WOR A;  5IYD K;  4IOC S;  4KC6 A;  5M3M K;  1Y1V C;  1TWC C;  4KAW X;  1BS2 A;  1SFO C;  4A3I C;  3HOZ C;  1BGW A;  4GTF A;  3PO3 C;  3S15 C;  2GSU A;  5JVO A;  1TWH C;  4NOI A;  3OEP A;  3HOY C;  4M1X A;  1UV7 A;  4YFN A;  3HOU K;  1Y1W C;  3CQZ K;  4BBS K;  3CF5 S;  2JA5 K;  4U67 S;  5L46 A;  4BXX C;  4GTA A;  3K7A K;  3GTL K;  3GIR A;  2RGR A;  1TWA C;  3RZO C;  2R93 A;  2PMZ D;  1SMY A;  5HL8 A;  3OPF A;  3S17 K;  4C3J C;  1R9T C;  4YG2 A;  3AD8 C;  1O2A A;  3DLL S;  3RZD C;  2YU9 K;  4KMD A;  1ZVU A;  5FJ8 K;  3GTM C;  3BUE A;  2E2H K;  4YFX A;  5E68 A;  3S1R K;  4KMU A;  3S1N K;  1J98 A;  3MML B;  4MEX A;  3WOD A;  3LPX A;  2PPB A;  1PJ6 A;  2NVQ K;  1EI6 A;  2CFA B;  4OIN A;  2W7V A;  1K83 A;  3GTP A;  5C4J K;  3HOW K;  3S2D C;  5C44 C;  4GTD A;  4RMF A;  1F7U A;  4A93 K;  4A3G K;  5IYD C;  3N0B A;  3EQL A;  2NVY A;  4BY1 C;  1USM A;  4AYB L;  2R7Z C;  2JH3 A;  4Y7N K;  5IOT A;  2WAQ L;  1YX2 A;  1I3Q C;  4LOW A;  4XCH A;  4A3G C;  1JOE A;  2JA6 C;  4BBR C;  4WFB S;  5C4J C;  3HOW C;  4X6A C;  1WOO A;  2GAG C;  1O28 A;  2XCR B;  4A3F K;  3LAP A;  1O24 A;  4KMH A;  2JA5 A;  5M5W K;  3S1M K;  3GEI A;  3GTM K;  2E2H A;  3G4C A;  2R92 C;  3GTO K;  1Y1W A;  4KB2 A;  3AQO A;  4LLG A;  2E2I A;  5DM6 S;  3T01 A;  4Y7N C;  1DCP A;  4J3N A;  4A3D K;  1JQW A;  1RU0 A;  4KAR A;  3K7A C;  3GTL C;  4BXX K;  2V6S A;  1XZQ B;  1EK8 A;  3FOE A;  1K83 K;  3RZD K;  4G0V A;  1XZQ A;  3HKZ D;  1R9T K;  1WCM K;  2PA8 L;  3GTK K;  3L4J A;  1VRQ C;  1GE9 A;  4A3B K;  5EGH A;  2JA6 A;  4A3K C;  4Q5S A;  3GTG C;  1WQG A;  4PAA A;  3TFJ A;  5TMC A;  2JA5 C;  4A3B C;  4WIL A;  4OIP A;  2V6T A;  4C3I C;  1WSR A;  3H3V L;  5JVG S;  3HOU C;  1TWG C;  4X6A K;  3ADA C;  4GTE A;  3PIO S;  3GTM A;  1PJ7 A;  4Q4Z A;  1Y1V K;  2YU9 C;  1I3Q K;  4A3K K;  5IYC K;  1XPP A;  3FKI A;  2A6E A;  2GAH C;  2VUM A;  3GDZ A;  5M5Y K;  2ZJP S;  4WJ3 M;  1SFO K;  5HL7 S;  1TWG A;  5C44 K;  1K83 C;  1B4A A;  4XSX A;  3H0G C;  3ORE A;  3SZY A;  2R92 K;  3HOV K;  4C45 A;  3CQZ C;  4BBS C;  4G7H A;  4PAB A;  2RH6 A;  1Y1W K;  2Y0S D;  4WFN S;  2CFA A;  3NUH A;  4BBR K;  2JA6 K;  4GT9 A;  2KXY A;  4QJV A;  1O2B A;  3GTO C;  2R7Z K;  3S1M C;  4KAS A;  2E2H C;  3PIP S;  2Y3P A;  3HOV C;  3A8I A;  3H0G K;  1IE0 A;  4MQ9 A;  1PJ5 A;  3S2D K;  2KPU A;  4C2M C;  4C3H K;  3ERE D;  2BE5 A;  5TJ3 A;  1EQR A;  2R93 C;  2Y0S L;  3GSI A;  4WJ4 A;  1X31 C;  2O5I A;  2NVT K;  1TWA K;  3FKI C;  1SFO A;  1ZQ1 C;  2PHC B;  1TWG K;  1VJE A;  3TTG A;  3S1R C;  3CQZ A;  1BJT A;  4C3I K;  1I50 K;  2E2J K;  2FQO A;  4G7O A;  2FQT A;  2JA7 C;  1I3Q A;  1YNJ A;  4GTL A;  2P5M A;  3S15 K;  4A3L C;  4QJV B;  4A3E K;  3GTG A;  3GTK C;  4KM9 A;  5M3F K;  1F93 A;  4KB4 A;  3HOZ K;  1WCM C;  3S2H K;  4A3J C;  2YU9 A;  1JVI A;  4KM8 A;  5IP7 K;  2JA7 A;  1VH2 A;  4BLA A;  1IL2 A;  1YCL A;  1EFW A;  2B63 K;  4XLP A;  4C3J K;  4A3D C;  3GEH A;  1KQ4 A;  3S17 C;  2ZFZ A;  4BY7 K;  5FLM C;  3BP8 C;  1IW7 A;  1O26 A;  1I6H K;  5IYB C;  3HOY K;  5IP9 K;  5CHP A;  3S16 C;  1TWH K;  3GTJ C;  1WOP A;  3PO3 K;  1O25 A;  4FZB A;  2JA8 C;  3GTP K;  2ZJR S;  1ZXO A;  4A3I K;  1VLO A;  4A3F C;  2NVX C;  4IO9 S;  1TWC K;  3HKZ L;  2ZUF A;  2XCQ A;  3GTO A;  4G0U A;  3LAJ A;  1XXB A;  4G0W A;  1WSV A;  1XZP B;  3PO2 C;  1TWA A;  3VA7 A;  3AD7 C;  4GTC A;  4A93 C;  3S1Q K;  1F7V A;  1DD5 A;  1AB4 A;  3V4G A;  1F9N A;  2NVX K;  3GEE A;  4A3C C;  4A3M K;  1I50 A;  4OIR A;  2V6U A;  1O2F B;  3I4N K;  3Q3Q A;  4AYB D;  2NVQ C;  3M4O K;  2KQ1 A;  4GTB A;  4O2D A;  4DDQ A;  4Y52 K;  3S1N C;  3GTQ A;  1O29 A;  1INN A;  3H3V D;  5JFE A;  3HXA A;  3DXJ A;  2WAQ D;  4BLB A;  2A68 A;  5FLM K; 
#chains in the Genus database with same CATH homology
 4ZH4 A;  5C4X K;  3HOV C;  2A6H A;  4XLN A;  3H0G K;  4MQ9 A;  5C4J K;  3HOW K;  3S2D K;  3S2D C;  5C44 C;  3S1Q C;  4A93 K;  4C2M C;  4C3H K;  4A3G K;  5IYD C;  4A3J K;  1I6V A;  2BE5 A;  2Y0S L;  3EQL A;  2R93 C;  4BY1 C;  4AYB L;  2R7Z C;  2O5J A;  3GTQ C;  4YFK A;  2O5I A;  4Y7N K;  3RZO K;  2NVT K;  4OIO A;  4OIQ A;  4BY7 C;  2WAQ L;  4A3E C;  1I3Q C;  4A3L K;  1TWA K;  2VUM K;  4A3G C;  4C3H C;  2JA6 C;  3FKI C;  4C2M K;  4JK1 A;  4BBR C;  5C4J C;  3HOW C;  4X6A C;  4A3F K;  1TWG K;  3S1R C;  3M4O C;  3GTP C;  4C3I K;  2R93 K;  5C4X C;  5D4D A;  5M5W K;  3S1M K;  4XSZ A;  1I50 K;  2PMZ L;  2E2J K;  5TMF A;  4G7O A;  3GTM K;  4A3C K;  1ZYR A;  2R92 C;  5M5X K;  2JA7 C;  3GTO K;  3S16 K;  1YNJ A;  4Y52 C;  4QIW D;  3S14 C;  3FKI K;  4LLG A;  3HOX C;  4LJZ A;  3S15 K;  4A3L C;  4QJV B;  4A3E K;  2E2I C;  5C3E C;  4Y7N C;  3GTQ K;  3GTK C;  5M3F K;  4BY1 K;  3HOZ K;  2CW0 A;  1WCM C;  4A3D K;  5IYC C;  4A3M C;  3S2H K;  4A3J C;  5IYD K;  3K7A C;  3GTL C;  5IP7 K;  4BXX K;  5M3M K;  1Y1V C;  3RZD K;  4XLP A;  1TWC C;  2A69 A;  1K83 K;  2B63 K;  3HKZ D;  1SFO C;  4A3I C;  3M3Y C;  4A3D C;  1WCM K;  3HOZ C;  4C3J K;  1R9T K;  3S17 C;  2PA8 L;  3GTK K;  4BY7 K;  5FLM C;  1IW7 A;  3PO3 C;  1YNN A;  2NVY K;  4A3B K;  3S15 C;  1I6H K;  3HOX K;  3GTJ K;  5IYB C;  1TWH C;  4NOI A;  4A3K C;  3GTG C;  3I4M C;  4Q5S A;  1TWF K;  5IP9 K;  3HOY K;  3S14 K;  4LK1 A;  3S16 C;  1TWF C;  3HOY C;  3GTJ C;  5TMC A;  1TWH K;  4YFN A;  3I4M K;  2WB1 L;  2JA5 C;  4A3B C;  3HOU K;  3PO3 K;  1HQM A;  1Y1W C;  4OIP A;  2JA8 C;  2JA8 K;  3CQZ K;  4C3I C;  4BBS K;  3H3V L;  3GTP K;  4A3I K;  3HOU C;  2JA5 K;  1TWG C;  4A3F C;  2NVX C;  4X6A K;  4KN4 A;  1TWC K;  3HKZ L;  1Y1V K;  4Q4Z A;  2YU9 C;  4BXX C;  5IP7 C;  4LK0 A;  3K7A K;  4QIW L;  3GTL K;  1TWA C;  2VUM C;  1I3Q K;  4KN7 A;  4A3K K;  5IYB K;  5IYC K;  3RZO C;  1XPP A;  2NVY C;  2PMZ D;  2A6E A;  1SMY A;  3PO2 K;  3PO2 C;  2E2I K;  3S17 K;  5M5Y K;  4C3J C;  3M3Y K;  1R9T C;  1SFO K;  2WB1 D;  4A93 C;  3S1Q K;  4YG2 A;  5C44 K;  1K83 C;  3RZD C;  2B63 C;  4XSX A;  2YU9 K;  3H0G C;  2JA7 K;  2R92 K;  2NVX K;  3HOV K;  5FJ8 K;  3GTM C;  4A3C C;  1I50 C;  2E2J C;  3S2H C;  4A3M K;  4OIR A;  2E2H K;  3I4N K;  3CQZ C;  4G7Z A;  2PA8 D;  4G7H A;  4YFX A;  4AYB D;  4BBS C;  1Y1W K;  2NVQ C;  3I4N C;  2Y0S D;  5C3E K;  3S1R K;  3M4O K;  4KMU A;  1BDF A;  3S1N K;  4BBR K;  4MEX A;  4GZY A;  2JA6 K;  3WOD A;  4MEY A;  4QJV A;  4Y52 K;  3S1N C;  5IP9 C;  2PPB A;  3GTG K;  3GTO C;  2NVT C;  3H3V D;  1I6H C;  2NVQ K;  3DXJ A;  2WAQ D;  2R7Z K;  3S1M C;  2A68 A;  5FLM K;  2E2H C;  4OIN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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