2O0BA

Mycobacterium tuberculosis epsp synthase in complex with s3p (partially photolyzed)
Total Genus 147
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
147
sequence length
424
structure length
424
Chain Sequence
MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGSELTVSGRIEPGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEVRGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Complex of 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE with S3P
rcsb
molecule tags Transferase
source organism Mycobacterium tuberculosis
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
total genus 147
structure length 424
sequence length 424
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2006-11-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2o0bA01
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2o0bA02
2GG4A 3SWAA 1EYNA 2QFTA 3TR1A 3SWQA 2GGAA 1EJDA 2O0ZA 3SWDA 3KQJA 3KQAA 1P89A 1G6SA 2O0XA 2QFQA 1MI4A 3RMTA 3SWGA 4E7DA 1RF4A 2YVWA 1DLGA 2GGDA 2RL2A 2AA9A 3ROIA 3NVSA 1YBGA 4GFPA 2O15A 5U4HA 1X8RA 1RF5A 4R7UA 3FJXA 2BJBA 4E7BA 3V5VA 2RL1A 3ZH4A 3R38A 5BUFA 2O0EA 3SWIA 2O0DA 3LTHA 1EJCA 4FQDA 2PQCA 4ZNDA 3KR6A 2PQ9A 3SWEA 2QFSA 5BQ2A 2Z2CA 4E7GA 2PQDA 3FJZA 4E7CA 4EIIA 3ZH3A 3ISSA 3UPKA 1P88A 1A2NA 3SG1A 1RYWA 2AAYA 1UAEA 3TI2A 4E7EA 1Q3GA 5BS5A 3SU9A 2PQBA 4N3PA 1X8TA 3V4TA 3FK0A 3VCYA 4E7FA 2O0BA 1NAWA 2GG6A 1G6TA 4EGRA 3SPBA 2QFUA 1Q36A 3SLHA 1RF6A 3FK1A
chains in the Genus database with same CATH superfamily
2GG4A 3SWAA 1EYNA 2QFTA 3TR1A 3SWQA 2GGAA 1EJDA 2O0ZA 3SWDA 3KQJA 3KQAA 1QMHA 1P89A 1G6SA 2O0XA 2QFQA 1MI4A 3RMTA 3SWGA 4E7DA 1RF4A 2YVWA 1DLGA 3TW3A 2GGDA 2RL2A 2AA9A 3ROIA 3TUTA 4O8JA 3NVSA 1YBGA 4GFPA 1QMIA 2O15A 5U4HA 1X8RA 1RF5A 4O89A 4R7UA 3FJXA 2BJBA 4E7BA 3V5VA 3TV1A 2RL1A 3ZH4A 3R38A 5BUFA 2O0EA 3SWIA 2O0DA 3LTHA 1EJCA 4FQDA 2PQCA 4ZNDA 3KR6A 2PQ9A 3SWEA 2QFSA 5BQ2A 3KGDA 2Z2CA 4E7GA 2PQDA 3FJZA 4E7CA 4EIIA 3ZH3A 3ISSA 3TUXA 3UPKA 1P88A 1A2NA 3SG1A 1RYWA 2AAYA 1UAEA 3TI2A 4E7EA 1Q3GA 5BS5A 3SU9A 2PQBA 4N3PA 1X8TA 4CLQA 3V4TA 3FK0A 3PQVA 3VCYA 4E7FA 2O0BA 1NAWA 2GG6A 1G6TA 4EGRA 3SPBA 2QFUA 1Q36A 3SLHA 1RF6A 3FK1A
chains in the Genus database with same CATH topology
2GG4A 3SWAA 1EYNA 2QFTA 3TR1A 3SWQA 2GGAA 1EJDA 2O0ZA 3SWDA 3KQJA 3KQAA 1P89A 1G6SA 2O0XA 2QFQA 1MI4A 3RMTA 3SWGA 4E7DA 1RF4A 2YVWA 1DLGA 2GGDA 2RL2A 2AA9A 3ROIA 3NVSA 1YBGA 4GFPA 2O15A 5U4HA 1X8RA 1RF5A 4R7UA 3FJXA 2BJBA 4E7BA 3V5VA 2RL1A 3ZH4A 3R38A 5BUFA 2O0EA 3SWIA 2O0DA 3LTHA 1EJCA 4FQDA 2PQCA 4ZNDA 3KR6A 2PQ9A 3SWEA 2QFSA 5BQ2A 2Z2CA 4E7GA 2PQDA 3FJZA 4E7CA 4EIIA 3ZH3A 3ISSA 3UPKA 1P88A 1A2NA 3SG1A 1RYWA 2AAYA 1UAEA 3TI2A 4E7EA 1Q3GA 5BS5A 3SU9A 2PQBA 4N3PA 1X8TA 3V4TA 3FK0A 3VCYA 4E7FA 2O0BA 1NAWA 2GG6A 1G6TA 4EGRA 3SPBA 2QFUA 1Q36A 3SLHA 1RF6A 3FK1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GG4 A;  3SWA A;  1EYN A;  2QFT A;  3TR1 A;  3SWQ A;  2GGA A;  1EJD A;  2O0Z A;  3SWD A;  3KQJ A;  3KQA A;  1P89 A;  1G6S A;  2O0X A;  2QFQ A;  1MI4 A;  3RMT A;  3SWG A;  4E7D A;  1RF4 A;  2YVW A;  1DLG A;  2GGD A;  2RL2 A;  2AA9 A;  3ROI A;  3NVS A;  1YBG A;  4GFP A;  2O15 A;  5U4H A;  1X8R A;  1RF5 A;  4R7U A;  3FJX A;  2BJB A;  4E7B A;  3V5V A;  2RL1 A;  3ZH4 A;  3R38 A;  5BUF A;  2O0E A;  3SWI A;  2O0D A;  3LTH A;  1EJC A;  4FQD A;  2PQC A;  4ZND A;  3KR6 A;  2PQ9 A;  3SWE A;  2QFS A;  5BQ2 A;  2Z2C A;  4E7G A;  2PQD A;  3FJZ A;  4E7C A;  4EII A;  3ZH3 A;  3ISS A;  3UPK A;  1P88 A;  1A2N A;  3SG1 A;  1RYW A;  2AAY A;  1UAE A;  3TI2 A;  4E7E A;  1Q3G A;  5BS5 A;  3SU9 A;  2PQB A;  4N3P A;  1X8T A;  3V4T A;  3FK0 A;  3VCY A;  4E7F A;  2O0B A;  1NAW A;  2GG6 A;  1G6T A;  4EGR A;  3SPB A;  2QFU A;  1Q36 A;  3SLH A;  1RF6 A;  3FK1 A; 
#chains in the Genus database with same CATH topology
 2GG4 A;  3SWA A;  1EYN A;  2QFT A;  3TR1 A;  3SWQ A;  2GGA A;  1EJD A;  2O0Z A;  3SWD A;  3KQJ A;  3KQA A;  1QMH A;  1P89 A;  1G6S A;  2O0X A;  2QFQ A;  1MI4 A;  3RMT A;  3SWG A;  4E7D A;  1RF4 A;  2YVW A;  1DLG A;  3TW3 A;  2GGD A;  2RL2 A;  2AA9 A;  3ROI A;  3TUT A;  4O8J A;  3NVS A;  1YBG A;  4GFP A;  1QMI A;  2O15 A;  5U4H A;  1X8R A;  1RF5 A;  4O89 A;  4R7U A;  3FJX A;  2BJB A;  4E7B A;  3V5V A;  3TV1 A;  2RL1 A;  3ZH4 A;  3R38 A;  5BUF A;  2O0E A;  3SWI A;  2O0D A;  3LTH A;  1EJC A;  4FQD A;  2PQC A;  4ZND A;  3KR6 A;  2PQ9 A;  3SWE A;  2QFS A;  5BQ2 A;  3KGD A;  2Z2C A;  4E7G A;  2PQD A;  3FJZ A;  4E7C A;  4EII A;  3ZH3 A;  3ISS A;  3TUX A;  3UPK A;  1P88 A;  1A2N A;  3SG1 A;  1RYW A;  2AAY A;  1UAE A;  3TI2 A;  4E7E A;  1Q3G A;  5BS5 A;  3SU9 A;  2PQB A;  4N3P A;  1X8T A;  4CLQ A;  3V4T A;  3FK0 A;  3PQV A;  3VCY A;  4E7F A;  2O0B A;  1NAW A;  2GG6 A;  1G6T A;  4EGR A;  3SPB A;  2QFU A;  1Q36 A;  3SLH A;  1RF6 A;  3FK1 A; 
#chains in the Genus database with same CATH homology
 2GG4 A;  3SWA A;  1EYN A;  2QFT A;  3TR1 A;  3SWQ A;  2GGA A;  1EJD A;  2O0Z A;  3SWD A;  3KQJ A;  3KQA A;  1P89 A;  1G6S A;  2O0X A;  2QFQ A;  1MI4 A;  3RMT A;  3SWG A;  4E7D A;  1RF4 A;  2YVW A;  1DLG A;  2GGD A;  2RL2 A;  2AA9 A;  3ROI A;  3NVS A;  1YBG A;  4GFP A;  2O15 A;  5U4H A;  1X8R A;  1RF5 A;  4R7U A;  3FJX A;  2BJB A;  4E7B A;  3V5V A;  2RL1 A;  3ZH4 A;  3R38 A;  5BUF A;  2O0E A;  3SWI A;  2O0D A;  3LTH A;  1EJC A;  4FQD A;  2PQC A;  4ZND A;  3KR6 A;  2PQ9 A;  3SWE A;  2QFS A;  5BQ2 A;  2Z2C A;  4E7G A;  2PQD A;  3FJZ A;  4E7C A;  4EII A;  3ZH3 A;  3ISS A;  3UPK A;  1P88 A;  1A2N A;  3SG1 A;  1RYW A;  2AAY A;  1UAE A;  3TI2 A;  4E7E A;  1Q3G A;  5BS5 A;  3SU9 A;  2PQB A;  4N3P A;  1X8T A;  3V4T A;  3FK0 A;  3VCY A;  4E7F A;  2O0B A;  1NAW A;  2GG6 A;  1G6T A;  4EGR A;  3SPB A;  2QFU A;  1Q36 A;  3SLH A;  1RF6 A;  3FK1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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