2O15A

Mycobacterium tuberculosis epsp synthase after partial products withdrawal
Total Genus 135
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
135
sequence length
424
structure length
424
Chain Sequence
MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVGSELTVSGRIEPGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGPVAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEVRGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE
publication title Complexes of 3-PHOSPHOSHIKIMATE 1-CARBOXYVINYLTRANSFERASE
rcsb
source organism Mycobacterium tuberculosis
total genus 135
structure length 424
sequence length 424
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2006-11-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2o15A01
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2o15A02
1RF6A 3FK1A 4E7BA 2AAYA 3ROIA 1MI4A 4E7DA 1G6TA 1X8RA 1UAEA 5U4HA 2O15A 3KQAA 3NVSA 1X8TA 1P89A 2PQBA 5BQ2A 1G6SA 3SWAA 2QFUA 2QFSA 3VCYA 2PQ9A 3SWDA 3V4TA 1YBGA 2O0EA 3SLHA 4R7UA 3ZH3A 2O0BA 3SWIA 2YVWA 1P88A 3FJXA 1DLGA 2PQCA 4E7FA 3SG1A 2GG6A 1Q36A 3SWGA 1RF4A 3SU9A 4ZNDA 4EIIA 2RL2A 3SWQA 3FK0A 4GFPA 1Q3GA 2O0ZA 1EJCA 3LTHA 3KR6A 1RF5A 3TI2A 2QFTA 3UPKA 2O0XA 4E7GA 2RL1A 2Z2CA 2GGDA 1EJDA 2GG4A 2QFQA 2AA9A 4FQDA 3KQJA 1EYNA 5BUFA 3RMTA 3SWEA 3TR1A 2PQDA 2GGAA 5BS5A 1NAWA 1RYWA 2O0DA 2BJBA 3FJZA 3R38A 4E7CA 1A2NA 3V5VA 4N3PA 3ISSA 4E7EA 3ZH4A 3SPBA 4EGRA
chains in the Genus database with same CATH superfamily
3KGDA 1RF6A 3FK1A 4CLQA 4E7BA 2AAYA 3ROIA 1MI4A 4E7DA 1G6TA 1X8RA 1UAEA 5U4HA 2O15A 3KQAA 1QMHA 3NVSA 1X8TA 1P89A 2PQBA 3TW3A 5BQ2A 1G6SA 3SWAA 2QFUA 2QFSA 3VCYA 2PQ9A 3SWDA 3V4TA 1YBGA 2O0EA 3SLHA 4R7UA 3ZH3A 3TUXA 2O0BA 3SWIA 2YVWA 1P88A 3FJXA 1DLGA 4O8JA 2PQCA 4E7FA 3SG1A 2GG6A 1Q36A 3SWGA 1RF4A 3SU9A 4ZNDA 4EIIA 2RL2A 3SWQA 3FK0A 4GFPA 1Q3GA 2O0ZA 1EJCA 3LTHA 3KR6A 3PQVA 1RF5A 3TI2A 2QFTA 3UPKA 2O0XA 4E7GA 2RL1A 2Z2CA 2GGDA 1EJDA 2GG4A 2QFQA 1QMIA 2AA9A 4FQDA 3KQJA 1EYNA 5BUFA 3RMTA 3SWEA 3TR1A 2PQDA 2GGAA 5BS5A 1NAWA 1RYWA 2O0DA 2BJBA 3FJZA 4O89A 3R38A 4E7CA 1A2NA 3V5VA 4N3PA 3ISSA 3TUTA 4E7EA 3ZH4A 3SPBA 4EGRA 3TV1A
chains in the Genus database with same CATH topology
1RF6A 3FK1A 4E7BA 2AAYA 3ROIA 1MI4A 4E7DA 1G6TA 1X8RA 1UAEA 5U4HA 2O15A 3KQAA 3NVSA 1X8TA 1P89A 2PQBA 5BQ2A 1G6SA 3SWAA 2QFUA 2QFSA 3VCYA 2PQ9A 3SWDA 3V4TA 1YBGA 2O0EA 3SLHA 4R7UA 3ZH3A 2O0BA 3SWIA 2YVWA 1P88A 3FJXA 1DLGA 2PQCA 4E7FA 3SG1A 2GG6A 1Q36A 3SWGA 1RF4A 3SU9A 4ZNDA 4EIIA 2RL2A 3SWQA 3FK0A 4GFPA 1Q3GA 2O0ZA 1EJCA 3LTHA 3KR6A 1RF5A 3TI2A 2QFTA 3UPKA 2O0XA 4E7GA 2RL1A 2Z2CA 2GGDA 1EJDA 2GG4A 2QFQA 2AA9A 4FQDA 3KQJA 1EYNA 5BUFA 3RMTA 3SWEA 3TR1A 2PQDA 2GGAA 5BS5A 1NAWA 1RYWA 2O0DA 2BJBA 3FJZA 3R38A 4E7CA 1A2NA 3V5VA 4N3PA 3ISSA 4E7EA 3ZH4A 3SPBA 4EGRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1RF6 A;  3FK1 A;  4E7B A;  2AAY A;  3ROI A;  1MI4 A;  4E7D A;  1G6T A;  1X8R A;  1UAE A;  5U4H A;  2O15 A;  3KQA A;  3NVS A;  1X8T A;  1P89 A;  2PQB A;  5BQ2 A;  1G6S A;  3SWA A;  2QFU A;  2QFS A;  3VCY A;  2PQ9 A;  3SWD A;  3V4T A;  1YBG A;  2O0E A;  3SLH A;  4R7U A;  3ZH3 A;  2O0B A;  3SWI A;  2YVW A;  1P88 A;  3FJX A;  1DLG A;  2PQC A;  4E7F A;  3SG1 A;  2GG6 A;  1Q36 A;  3SWG A;  1RF4 A;  3SU9 A;  4ZND A;  4EII A;  2RL2 A;  3SWQ A;  3FK0 A;  4GFP A;  1Q3G A;  2O0Z A;  1EJC A;  3LTH A;  3KR6 A;  1RF5 A;  3TI2 A;  2QFT A;  3UPK A;  2O0X A;  4E7G A;  2RL1 A;  2Z2C A;  2GGD A;  1EJD A;  2GG4 A;  2QFQ A;  2AA9 A;  4FQD A;  3KQJ A;  1EYN A;  5BUF A;  3RMT A;  3SWE A;  3TR1 A;  2PQD A;  2GGA A;  5BS5 A;  1NAW A;  1RYW A;  2O0D A;  2BJB A;  3FJZ A;  3R38 A;  4E7C A;  1A2N A;  3V5V A;  4N3P A;  3ISS A;  4E7E A;  3ZH4 A;  3SPB A;  4EGR A; 
#chains in the Genus database with same CATH topology
 3KGD A;  1RF6 A;  3FK1 A;  4CLQ A;  4E7B A;  2AAY A;  3ROI A;  1MI4 A;  4E7D A;  1G6T A;  1X8R A;  1UAE A;  5U4H A;  2O15 A;  3KQA A;  1QMH A;  3NVS A;  1X8T A;  1P89 A;  2PQB A;  3TW3 A;  5BQ2 A;  1G6S A;  3SWA A;  2QFU A;  2QFS A;  3VCY A;  2PQ9 A;  3SWD A;  3V4T A;  1YBG A;  2O0E A;  3SLH A;  4R7U A;  3ZH3 A;  3TUX A;  2O0B A;  3SWI A;  2YVW A;  1P88 A;  3FJX A;  1DLG A;  4O8J A;  2PQC A;  4E7F A;  3SG1 A;  2GG6 A;  1Q36 A;  3SWG A;  1RF4 A;  3SU9 A;  4ZND A;  4EII A;  2RL2 A;  3SWQ A;  3FK0 A;  4GFP A;  1Q3G A;  2O0Z A;  1EJC A;  3LTH A;  3KR6 A;  3PQV A;  1RF5 A;  3TI2 A;  2QFT A;  3UPK A;  2O0X A;  4E7G A;  2RL1 A;  2Z2C A;  2GGD A;  1EJD A;  2GG4 A;  2QFQ A;  1QMI A;  2AA9 A;  4FQD A;  3KQJ A;  1EYN A;  5BUF A;  3RMT A;  3SWE A;  3TR1 A;  2PQD A;  2GGA A;  5BS5 A;  1NAW A;  1RYW A;  2O0D A;  2BJB A;  3FJZ A;  4O89 A;  3R38 A;  4E7C A;  1A2N A;  3V5V A;  4N3P A;  3ISS A;  3TUT A;  4E7E A;  3ZH4 A;  3SPB A;  4EGR A;  3TV1 A; 
#chains in the Genus database with same CATH homology
 1RF6 A;  3FK1 A;  4E7B A;  2AAY A;  3ROI A;  1MI4 A;  4E7D A;  1G6T A;  1X8R A;  1UAE A;  5U4H A;  2O15 A;  3KQA A;  3NVS A;  1X8T A;  1P89 A;  2PQB A;  5BQ2 A;  1G6S A;  3SWA A;  2QFU A;  2QFS A;  3VCY A;  2PQ9 A;  3SWD A;  3V4T A;  1YBG A;  2O0E A;  3SLH A;  4R7U A;  3ZH3 A;  2O0B A;  3SWI A;  2YVW A;  1P88 A;  3FJX A;  1DLG A;  2PQC A;  4E7F A;  3SG1 A;  2GG6 A;  1Q36 A;  3SWG A;  1RF4 A;  3SU9 A;  4ZND A;  4EII A;  2RL2 A;  3SWQ A;  3FK0 A;  4GFP A;  1Q3G A;  2O0Z A;  1EJC A;  3LTH A;  3KR6 A;  1RF5 A;  3TI2 A;  2QFT A;  3UPK A;  2O0X A;  4E7G A;  2RL1 A;  2Z2C A;  2GGD A;  1EJD A;  2GG4 A;  2QFQ A;  2AA9 A;  4FQD A;  3KQJ A;  1EYN A;  5BUF A;  3RMT A;  3SWE A;  3TR1 A;  2PQD A;  2GGA A;  5BS5 A;  1NAW A;  1RYW A;  2O0D A;  2BJB A;  3FJZ A;  3R38 A;  4E7C A;  1A2N A;  3V5V A;  4N3P A;  3ISS A;  4E7E A;  3ZH4 A;  3SPB A;  4EGR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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