2O5JD

Crystal structure of the t. thermophilus rnap polymerase elongation complex with the ntp substrate analog
Total Genus 275
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
275
sequence length
1504
structure length
1264
Chain Sequence
KKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLDGVALYRFASILVVKARVYPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVRAFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPLRSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVVLLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKKGAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELIQLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETTEKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVDVTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGVCQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDVEALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARKEAVEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords 5'-D(P*CP*CP*CP*TP*GP*TP*CP*TP*GP*GP*CP*GP*TP*TP*CP*GP*CP*GP
publication title Structural basis for substrate loading in bacterial RNA polymerase.
pubmed doi rcsb
molecule tags Transferase/dna-rna hybrid
total genus 275
structure length 1264
sequence length 1504
chains with identical sequence N
ec nomenclature ec 2.7.7.6: DNA-directed RNA polymerase.
pdb deposition date 2006-12-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
D PF00623 RNA_pol_Rpb1_2 RNA polymerase Rpb1, domain 2
D PF04983 RNA_pol_Rpb1_3 RNA polymerase Rpb1, domain 3
D PF04997 RNA_pol_Rpb1_1 RNA polymerase Rpb1, domain 1
D PF04998 RNA_pol_Rpb1_5 RNA polymerase Rpb1, domain 5
D PF05000 RNA_pol_Rpb1_4 RNA polymerase Rpb1, domain 4
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.132.30 Mainly Alpha Orthogonal Bundle Topoisomerase I; Chain A, domain 4 Topoisomerase I; Chain A, domain 4 2o5jD05
1.10.274.100 Mainly Alpha Orthogonal Bundle Enzyme I; Chain A, domain 2 Enzyme I; Chain A, domain 2 2o5jD04
2.20.28.170 Mainly Beta Single Sheet Rubrerythrin, domain 2 Rubrerythrin, domain 2 2o5jD07
2.40.40.70 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 2o5jD03
1I6VD 2PMZA 2A6HD 2R92A 2JA5A 2YU9A 3CQZA 2R7ZA 2B63A 2A6ED 2WAQA 2O5JD 2A68D 1YNND 1I3QA 3H0GA 1TWHA 4C2MA 1IW7D 3GTQA 3FKIA 1TWFA 3GTOA 2R93A 1YNJD 1SFOA 4QIWA 2CW0D 1Y1WA 2JA6A 2Y0SA 2VUMA 2NVXA 2BE5D 3GTJA 4AYBA 2E2IA 1K83A 1TWCA 3GTLA 2JA7A 2WB1A 1HQMD 1WCMA 1TWGA 1I50A 3GTPA 3GTMA 1SMYD 1R9TA 1Y1VA 3GTKA 3HKZA 1TWAA 1ZYRD 3GTGA 2E2HA 2NVYA 2A69D
chains in the Genus database with same CATH superfamily
5IP7L 2JIPA 1E60A 1Q8IA 3RZTA 4A3FL 3H9BA 1T9PA 4KB2A 2YU9A 1R49A 2AE0X 2JI2A 3VPBE 2G6GA 4RV0A 1PQFA 3FKIA 5C1BA 4NOMA 2KN9A 1EZBA 5GLXA 5DM71 1RDVA 1AA6A 4AR6A 3MPSA 4WFN1 4ZN3B 4H3TA 3GTPA 1KQGA 2JA5L 1EZAA 1BQ9A 4JP6A 1L8FA 2MX9A 1PFWA 2JI3A 4LHLA 1TWHL 1I6VD 2XJPA 1WLFA 2PICA 1G8JA 2V3VA 1E5VA 1EK8A 2EEOB 3H0GA 3K5NA 4C6GA 4BAAA 3X2KA 4KDDA 1QDNA 1VC3B 3HU1A 2E2HL 4NOHA 4KO8A 4K9FA 3S1QL 1R0GA 5GADc 4BBRL 3HKZA 5MF6A 4AHXA 2VL6A 1Y5IA 3IR7A 2KI8A 5CQGA 1NNQA 2F4QA 3GTQA 1DD5A 3RYGA 1PQEA 3MQKB 3LR8A 1ZC1A 1Y2MA 1A35A 2A6ED 1B13A 1FDOA 3PIO1 5FTJA 5IP9L 1IW7D 1TWGL 1R0FA 5M5WL 2K2DA 4A3CL 2WB1P 5GAHc 3PO3L 3HU2A 3P9AA 3SUJA 1Y1VL 3HOWL 2G5DA 1YLEA 3K5MA 3IU3I 2EZBA 4Y52L 4JJOA 1H7VA 2R4GA 3QVDA 4ZN1B 4A3JL 1PYQA 5T5MD 2B63A 2AQLA 4D7ZB 2O5JD 1B71A 4POGA 4CRYG 3X2OA 4TVMA 1ZYMA 5JSNB 1I50L 1TWFA 1P7PA 1RDGA 2VUMA 1E18A 1E61A 3DU5A 1S2ZA 4AR3A 4KB4A 4LMOA 3X2IA 3NZ4A 2YU9L 3PL5A 4FXDA 1UHEA 2EZAA 4LHNA 1TWAA 5IYBL 5C9HA 2WAQP 3MSUA 2NVYA 4CEJA 3M4AA 3J7Z1 3FKIL 4V2QA 4AR5A 5FTKA 4C3HL 4IP8A 2M6OA 1OGYA 5C18A 3H99A 4GA5A 5H4UA 5M5YL 2AQCA 4F3EA 3H3VM 3GTOA 1YNJD 1LPQA 1SFOA 1WJVA 3PO2L 1LKOA 4POFA 3J7Y1 3X2HA 5IY0A 4JS7A 3U4QA 3KYLA 2WB1A 3S16L 2DMRA 3RZOL 1QYBA 4ZM7A 5FLML 2L0ZA 3S1ML 2X0OA 2NYAA 2XJTA 4D3YA 2J9UB 2A6HD 2XJVA 2RFKB 1H5NA 2JIRA 4UY81 3PIP1 1IU5A 1IU6A 3HU3A 1QCVA 1ODHA 3ZG6A 1WC2A 4AHYA 4AOKB 2FIOA 5B6CA 1Y4ZA 1VCXA 3JR7A 3P2AA 1PQHA 1VZHA 1RYTA 3X2NA 2Y0SA 1FHHA 1T9QA 4B8CD 2KQAA 3K57A 3GTQL 3I4ML 1E32A 1YV1A 1VZGA 4C5RA 2PMZP 1Y1WA 3LF9A 3HOUL 4OYDB 1OWCA 2WAQA 4X6AL 2F5JA 1I3QA 4BABA 2V3BB 1BE7A 1SMWA 5C44L 2MX8A 2PVXA 1WQGA 1DMSA 2V45A 4AYBP 1PYUB 5JSBB 1W27A 5DYIA 3QC8A 4QIWA 1B2OA 5K2ME 2XJQA 3GTLA 3X2GA 1BW3A 1C09A 3GTMA 1CZ4A 2LTHA 4BXXL 2YIIA 1R9TA 4CEHA 2CKCA 4FG4A 1R0IA 2B63L 3CZBA 5FJ8L 3GTGA 1R0HA 1T6JA 4CEIA 2HROA 3H97A 4Q5GA 4KLNA 3EZEA 1TWFL 4XXBB 3CF2A 4KC6A 2VUML 1YNND 2K3NA 4L48A 2K3OA 2MP0A 1YUXA 3QWZA 4A3LL 2APOB 3WWLA 1Q16A 4Q5VA 4A3DL 1IROA 1FHMA 4G6BA 3EZBA 1DMRA 2NAPA 4JAFA 1TWAL 2N3EA 1TWCA 2NVYL 2K3QA 2JA7A 2HR5A 1G8KA 1H0HA 1T8IA 3S1NL 1RYQA 1BFYA 4KODA 2KKDA 3LR2A 7RXNA 2C45A 3LWQB 2PJJA 5EINC 4A93L 3DMRA 2VK9A 4A3KL 3HOVL 2LKMB 2A69D 1V9MA 2PMZA 1PT1A 3KYWA 1IS1A 2B9SB 1SFOL 2JIMA 2VPWA 2A68D 1PFYA 4YWLA 3X2LA 4FFTA 4C2MA 5C4XL 3HAXC 3X2PA 4NOKA 3TM7B 1FDIA 2JA6A 3LPEB 2FIPA 2NVQL 4NOLA 3PKIA 4A3BL 2NVXA 4XGHA 3GTKL 2BE5D 2E2JL 4AYBA 2E2IA 1I6HL 3LR6A 3O5AA 1K4SA 2AYJA 3K35A 2PYAA 3X2JA 4C5UA 1ZYRD 3I4NL 1MIUA 2E7ZA 1E8JA 2JA8L 4C5SA 3EZAA 2Z3RB 3DU6A 3LHPS 5C3EL 5M3ML 3PZAA 4A3EL 4O26A 1B2JA 3GTPL 2N1DB 5JVH1 4AVRA 3WWNB 3SUMA 8RXNA 3S1RL 1Y1WL 3HOZL 1KQFA 3U44A 1RR8C 1LKMA 5DM61 3S14L 1PFVA 1YK5A 1SMYD 3S15L 4FGUA 1Y1VA 5M3FL 1S3SA 2ZIXA 5DYGA 2X0QA 2CKAA 1I3QL 4BBSL 2PSMC 3HOYL 4AI3A 4IP9A 3H0GL 2AUSB 1WQFA 3SUKA 3M3GA 3M3YL 2Z3QB 2M6PA 5GM9A 1NXGA 3LWRB 3HJWB 4A3ML 1DX8A 4C3JL 2PPTA 3QQ7A 2HWGA 1VZIA 3NFPI 5FTNA 2M4VA 3GTLL 1EU1A 2PJHB 1WQHA 3GTML 1R9TL 1RB9A 1Y698 3PWFA 5IYCL 4AHZA 1PPYA 4JCWA 3HKZP 3GTJA 4GFQA 1BQ8A 3GTGL 3IR5A 1QQTA 1HQMD 5MFZA 5GLFA 1HD5A 1A36A 5MFPA 1RWDA 2HVYC 1OA7A 4FBSA 1Z92B 5AI3A 5H1Sc 2B5ID 3WVOA 3LWPB 1CADA 2H12A 2PI8A 2ERJA 4JAGA 2R92A 4CRZA 3CQZA 1RRJA 1LKPA 3B0AB 1SMMA 5T5ID 1TWCL 2JA7L 2XJUA 4A3IL 2GMGA 1OA9A 2R93A 1PZXA 1PFUA 4RXNA 3SJRA 3RZDL 1AW8B 1K83A 3QQCE 3KYXA 1NH3A 1WCMA 4QCLA 2MQAA 3PLXB 5IYDL 2LPJA 2JIOA 5FTLA 1R7RA 1GE9A 4GS7D 4FERA 1EJ9A 4KDIA 3FDJA 1F4LA 2R7ZA 2JA6L 1QCSA 2NVXL 5AI2A 2EZCA 3P8BA 2E2IL 4C3IL 3K5LA 4AI2A 1BRFA 1OWBA 2QL0A 1ZRPA 1SIWA 3KYVA 5MLC9 2Y0NA 2HCZX 2X0PA 3PKJA 4AR4A 3K7AL 3S17L 3KYYA 2VPXA 1EH1A 1S30A 5JVG1 4KAWX 3K5OA 4KDLA 4AHWA 4DMRA 2YUJA 2JA5A 2V0EA 3LWVB 3A44A 4L8IA 1CAAA 4A3GL 3GTOL 3HJYB 1CR5A 2VPYA 1CZ5A 5MLC3 3OUGA 1TWHA 2ENGA 3HOXL 5GAGc 4JAEA 4AI0A 3D30A 2ERSA 5EPPA 1YUZA 1T6PA 1NXEA 4TPUA 4EJ3A 4BY7L 3SS2A 5RXNA 2LPIA 4D3ZA 2DSXA 4CQ5A 2XJSA 4FG2A 3IAYA 1BW4A 2JIQA 2VPZA 5C4JL 2E2HA 1N10A 3B08B 2XJRA 1TMOA 2BH0A 1SMUA 3KYUA 5AN9H 3SULA 3TIWA 2IV2X 1R5ZA 5EIOC 5FTMA 2Y0SP 3GTJL 2NYDA 3K59A 3LRDA 4U671 2PNWA 1LTLA 1A31A 5M5XL 2LYIA 2LCQA 3ML1A 2CR8A 1ISEA 4E6YA 4JP7A 3ENGA 5IZ2A 1TGOA 1R27A 3IR6A 4ENGA 3S2DL 4YWMA 4AHCA 3K58A 4V2RA 2PVEA 1TWGA 4JLRC 3X2MA 2R92L 2MS3A 3CQZL 1YK4A 5GLYA 3H9CA 2M4YA 2GAEA 4JADA 4C2M1 1S24A 2V0FA 1UHDA 1JYBA 2EY4E 3RZ6A 2JI1A 1K4TA 1SEUA 1T9OA 4FYDA 4AONB 1TL8A 3S2HL 2R93L 6RXNA 4V196 4AZDA 4QIWP 2C6AA 5MGNA 1K83L 1WCML 3LWOB 4BY1L 2CW0D 4AAYA 3QQ8A 4GA6A 1DVBA 1R0JA 4AN8A 2C6BA 3MAQA 4CS0A 3LNLA 4Y7NL 1I50A 4AI1A 1SC7A 4ME3A 3M4OL 2RDVA 1PT0A 2R7ZL 3GTKA 5GAEc 2NVTL 1IRNA
chains in the Genus database with same CATH topology
2JIPA 1E60A 1Q8IA 3RZTA 1T9PA 4KB2A 2YU9A 1R49A 2AE0X 2JI2A 3VPBE 2G6GA 4RV0A 1PQFA 3FKIA 5C1BA 4NOMA 2KN9A 5DM71 1RDVA 1AA6A 4AR6A 3MPSA 4WFN1 4ZN3B 4H3TA 3GTPA 1KQGA 1BQ9A 2MX9A 2JI3A 4LHLA 1I6VD 2XJPA 1WLFA 2PICA 1G8JA 2V3VA 1E5VA 1EK8A 2EEOB 3H0GA 3K5NA 4KDDA 1QDNA 1VC3B 3HU1A 4NOHA 4KO8A 4K9FA 1R0GA 5GADc 5MF6A 3HKZA 1Y5IA 4AHXA 2VL6A 3IR7A 2KI8A 5CQGA 1NNQA 2F4QA 3GTQA 1DD5A 3RYGA 1PQEA 3LR8A 1ZC1A 1A35A 2A6ED 1B13A 1FDOA 3PIO1 5FTJA 1IW7D 1R0FA 2K2DA 3HU2A 5GAHc 3P9AA 2G5DA 1YLEA 3K5MA 3IU3I 1H7VA 2R4GA 3QVDA 4ZN1B 1PYQA 5T5MD 2B63A 2AQLA 4D7ZB 2O5JD 1B71A 4POGA 4CRYG 4TVMA 5JSNB 1TWFA 1RDGA 2VUMA 1E18A 1E61A 3DU5A 1S2ZA 4AR3A 4KB4A 4LMOA 4FXDA 1UHEA 4LHNA 1TWAA 5C9HA 3MSUA 2NVYA 4CEJA 3M4AA 3J7Z1 4AR5A 5FTKA 4IP8A 2M6OA 1OGYA 5C18A 4GA5A 4F3EA 3GTOA 1YNJD 1LPQA 1SFOA 1WJVA 1LKOA 4POFA 3J7Y1 5IY0A 3U4QA 3KYLA 2WB1A 2DMRA 1QYBA 2L0ZA 2X0OA 2NYAA 2XJTA 4D3YA 2J9UB 2A6HD 2XJVA 1H5NA 2JIRA 4UY81 3PIP1 1IU5A 1IU6A 3HU3A 1QCVA 1ODHA 3ZG6A 4AHYA 4AOKB 2FIOA 5B6CA 1Y4ZA 1VCXA 3P2AA 1PQHA 1VZHA 1RYTA 2Y0SA 1FHHA 1T9QA 4B8CD 3K57A 1E32A 1YV1A 1VZGA 1Y1WA 3LF9A 4OYDB 1OWCA 2WAQA 2F5JA 1I3QA 2V3BB 1BE7A 1SMWA 2MX8A 2PVXA 1WQGA 1DMSA 2V45A 1PYUB 5JSBB 5DYIA 3QC8A 4QIWA 1B2OA 5K2ME 2XJQA 3GTLA 1C09A 3GTMA 1CZ4A 2LTHA 4CEHA 1R9TA 2CKCA 1R0IA 3CZBA 3GTGA 1R0HA 4CEIA 4Q5GA 4KLNA 4XXBB 3CF2A 4KC6A 1YNND 2K3NA 2K3OA 1YUXA 3QWZA 1Q16A 3WWLA 4Q5VA 1IROA 1FHMA 4G6BA 1DMRA 2NAPA 4JAFA 2N3EA 1TWCA 2K3QA 2JA7A 2HR5A 1G8KA 1H0HA 1T8IA 1BFYA 1RYQA 4KODA 2KKDA 3LR2A 7RXNA 2C45A 2PJJA 3DMRA 5EINC 2VK9A 2LKMB 2A69D 1V9MA 2PMZA 1PT1A 3KYWA 1IS1A 2B9SB 2JIMA 2VPWA 2A68D 4YWLA 4C2MA 4NOKA 3TM7B 1FDIA 2JA6A 3LPEB 2FIPA 4NOLA 3PKIA 2NVXA 4XGHA 2BE5D 4AYBA 2E2IA 3LR6A 3O5AA 1K4SA 2AYJA 3K35A 2PYAA 1ZYRD 1MIUA 2E7ZA 1E8JA 2Z3RB 3DU6A 3LHPS 3PZAA 4O26A 1B2JA 2N1DB 5JVH1 3WWNB 8RXNA 1KQFA 3U44A 1RR8C 1LKMA 5DM61 1YK5A 1SMYD 4FGUA 1Y1VA 1S3SA 2ZIXA 5DYGA 2X0QA 2CKAA 2PSMC 4AI3A 4IP9A 1WQFA 2Z3QB 2M6PA 1NXGA 1DX8A 3QQ7A 2PPTA 1VZIA 3NFPI 5FTNA 2M4VA 1EU1A 2PJHB 1WQHA 1RB9A 1Y698 3PWFA 4AHZA 1PPYA 3GTJA 4GFQA 1BQ8A 3IR5A 1HQMD 5MFZA 5GLFA 1A36A 5MFPA 1RWDA 4FBSA 1Z92B 5AI3A 5H1Sc 2B5ID 3WVOA 1CADA 2H12A 2PI8A 2ERJA 4JAGA 2R92A 4CRZA 3CQZA 1RRJA 1LKPA 3B0AB 1SMMA 5T5ID 2XJUA 2GMGA 2R93A 4RXNA 3SJRA 1AW8B 1K83A 3QQCE 3KYXA 1NH3A 1WCMA 4QCLA 2MQAA 3PLXB 2LPJA 2JIOA 5FTLA 1R7RA 1GE9A 4GS7D 1EJ9A 4KDIA 2R7ZA 1QCSA 5AI2A 3P8BA 3K5LA 4AI2A 1BRFA 1OWBA 2QL0A 1ZRPA 1SIWA 3KYVA 5MLC9 2Y0NA 2X0PA 3PKJA 4AR4A 3KYYA 2VPXA 1EH1A 1S30A 5JVG1 4KAWX 3K5OA 4KDLA 4AHWA 4DMRA 2YUJA 2JA5A 2V0EA 3A44A 4L8IA 1CAAA 1CR5A 2VPYA 1CZ5A 5MLC3 3OUGA 1TWHA 5GAGc 4JAEA 4AI0A 2ERSA 5EPPA 1YUZA 1NXEA 4TPUA 4EJ3A 3SS2A 5RXNA 2LPIA 4D3ZA 2DSXA 2XJSA 3IAYA 2JIQA 2VPZA 2E2HA 1TMOA 3B08B 2XJRA 1SMUA 3KYUA 5AN9H 3TIWA 2IV2X 1R5ZA 5EIOC 5FTMA 2NYDA 3K59A 3LRDA 4U671 2PNWA 1LTLA 1A31A 2LYIA 2LCQA 3ML1A 2CR8A 1ISEA 4E6YA 5IZ2A 1TGOA 1R27A 3IR6A 4YWMA 4AHCA 3K58A 2PVEA 1TWGA 4JLRC 2MS3A 1YK4A 2M4YA 2GAEA 4JADA 1S24A 2V0FA 1UHDA 1JYBA 3RZ6A 2JI1A 1K4TA 1SEUA 1T9OA 4FYDA 4AONB 1TL8A 6RXNA 4V196 4AZDA 2C6AA 5MGNA 2CW0D 4AAYA 3QQ8A 4GA6A 1DVBA 1R0JA 4AN8A 2C6BA 3MAQA 4CS0A 3LNLA 1I50A 4AI1A 1SC7A 4ME3A 2RDVA 1PT0A 3GTKA 5GAEc 1IRNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1I6V D;  2PMZ A;  2A6H D;  2R92 A;  2JA5 A;  2YU9 A;  3CQZ A;  2R7Z A;  2B63 A;  2A6E D;  2WAQ A;  2O5J D;  2A68 D;  1YNN D;  1I3Q A;  3H0G A;  1TWH A;  4C2M A;  1IW7 D;  3GTQ A;  3FKI A;  1TWF A;  3GTO A;  2R93 A;  1YNJ D;  1SFO A;  4QIW A;  2CW0 D;  1Y1W A;  2JA6 A;  2Y0S A;  2VUM A;  2NVX A;  2BE5 D;  3GTJ A;  4AYB A;  2E2I A;  1K83 A;  1TWC A;  3GTL A;  2JA7 A;  2WB1 A;  1HQM D;  1WCM A;  1TWG A;  1I50 A;  3GTP A;  3GTM A;  1SMY D;  1R9T A;  1Y1V A;  3GTK A;  3HKZ A;  1TWA A;  1ZYR D;  3GTG A;  2E2H A;  2NVY A;  2A69 D; 
#chains in the Genus database with same CATH topology
 5IP7 L;  2JIP A;  1E60 A;  1Q8I A;  3RZT A;  4A3F L;  3H9B A;  1T9P A;  4KB2 A;  2YU9 A;  1R49 A;  2AE0 X;  2JI2 A;  3VPB E;  2G6G A;  4RV0 A;  1PQF A;  3FKI A;  5C1B A;  4NOM A;  2KN9 A;  1EZB A;  5GLX A;  5DM7 1;  1RDV A;  1AA6 A;  4AR6 A;  3MPS A;  4WFN 1;  4ZN3 B;  4H3T A;  3GTP A;  1KQG A;  2JA5 L;  1EZA A;  1BQ9 A;  4JP6 A;  1L8F A;  2MX9 A;  1PFW A;  2JI3 A;  4LHL A;  1TWH L;  1I6V D;  2XJP A;  1WLF A;  2PIC A;  1G8J A;  2V3V A;  1E5V A;  1EK8 A;  2EEO B;  3H0G A;  3K5N A;  4C6G A;  4BAA A;  3X2K A;  4KDD A;  1QDN A;  1VC3 B;  3HU1 A;  2E2H L;  4NOH A;  4KO8 A;  4K9F A;  3S1Q L;  1R0G A;  5GAD c;  4BBR L;  3HKZ A;  5MF6 A;  4AHX A;  2VL6 A;  1Y5I A;  3IR7 A;  2KI8 A;  5CQG A;  1NNQ A;  2F4Q A;  3GTQ A;  1DD5 A;  3RYG A;  1PQE A;  3MQK B;  3LR8 A;  1ZC1 A;  1Y2M A;  1A35 A;  2A6E D;  1B13 A;  1FDO A;  3PIO 1;  5FTJ A;  5IP9 L;  1IW7 D;  1TWG L;  1R0F A;  5M5W L;  2K2D A;  4A3C L;  2WB1 P;  5GAH c;  3PO3 L;  3HU2 A;  3P9A A;  3SUJ A;  1Y1V L;  3HOW L;  2G5D A;  1YLE A;  3K5M A;  3IU3 I;  2EZB A;  4Y52 L;  4JJO A;  1H7V A;  2R4G A;  3QVD A;  4ZN1 B;  4A3J L;  1PYQ A;  5T5M D;  2B63 A;  2AQL A;  4D7Z B;  2O5J D;  1B71 A;  4POG A;  4CRY G;  3X2O A;  4TVM A;  1ZYM A;  5JSN B;  1I50 L;  1TWF A;  1P7P A;  1RDG A;  2VUM A;  1E18 A;  1E61 A;  3DU5 A;  1S2Z A;  4AR3 A;  4KB4 A;  4LMO A;  3X2I A;  3NZ4 A;  2YU9 L;  3PL5 A;  4FXD A;  1UHE A;  2EZA A;  4LHN A;  1TWA A;  5IYB L;  5C9H A;  2WAQ P;  3MSU A;  2NVY A;  4CEJ A;  3M4A A;  3J7Z 1;  3FKI L;  4V2Q A;  4AR5 A;  5FTK A;  4C3H L;  4IP8 A;  2M6O A;  1OGY A;  5C18 A;  3H99 A;  4GA5 A;  5H4U A;  5M5Y L;  2AQC A;  4F3E A;  3H3V M;  3GTO A;  1YNJ D;  1LPQ A;  1SFO A;  1WJV A;  3PO2 L;  1LKO A;  4POF A;  3J7Y 1;  3X2H A;  5IY0 A;  4JS7 A;  3U4Q A;  3KYL A;  2WB1 A;  3S16 L;  2DMR A;  3RZO L;  1QYB A;  4ZM7 A;  5FLM L;  2L0Z A;  3S1M L;  2X0O A;  2NYA A;  2XJT A;  4D3Y A;  2J9U B;  2A6H D;  2XJV A;  2RFK B;  1H5N A;  2JIR A;  4UY8 1;  3PIP 1;  1IU5 A;  1IU6 A;  3HU3 A;  1QCV A;  1ODH A;  3ZG6 A;  1WC2 A;  4AHY A;  4AOK B;  2FIO A;  5B6C A;  1Y4Z A;  1VCX A;  3JR7 A;  3P2A A;  1PQH A;  1VZH A;  1RYT A;  3X2N A;  2Y0S A;  1FHH A;  1T9Q A;  4B8C D;  2KQA A;  3K57 A;  3GTQ L;  3I4M L;  1E32 A;  1YV1 A;  1VZG A;  4C5R A;  2PMZ P;  1Y1W A;  3LF9 A;  3HOU L;  4OYD B;  1OWC A;  2WAQ A;  4X6A L;  2F5J A;  1I3Q A;  4BAB A;  2V3B B;  1BE7 A;  1SMW A;  5C44 L;  2MX8 A;  2PVX A;  1WQG A;  1DMS A;  2V45 A;  4AYB P;  1PYU B;  5JSB B;  1W27 A;  5DYI A;  3QC8 A;  4QIW A;  1B2O A;  5K2M E;  2XJQ A;  3GTL A;  3X2G A;  1BW3 A;  1C09 A;  3GTM A;  1CZ4 A;  2LTH A;  4BXX L;  2YII A;  1R9T A;  4CEH A;  2CKC A;  4FG4 A;  1R0I A;  2B63 L;  3CZB A;  5FJ8 L;  3GTG A;  1R0H A;  1T6J A;  4CEI A;  2HRO A;  3H97 A;  4Q5G A;  4KLN A;  3EZE A;  1TWF L;  4XXB B;  3CF2 A;  4KC6 A;  2VUM L;  1YNN D;  2K3N A;  4L48 A;  2K3O A;  2MP0 A;  1YUX A;  3QWZ A;  4A3L L;  2APO B;  3WWL A;  1Q16 A;  4Q5V A;  4A3D L;  1IRO A;  1FHM A;  4G6B A;  3EZB A;  1DMR A;  2NAP A;  4JAF A;  1TWA L;  2N3E A;  1TWC A;  2NVY L;  2K3Q A;  2JA7 A;  2HR5 A;  1G8K A;  1H0H A;  1T8I A;  3S1N L;  1RYQ A;  1BFY A;  4KOD A;  2KKD A;  3LR2 A;  7RXN A;  2C45 A;  3LWQ B;  2PJJ A;  5EIN C;  4A93 L;  3DMR A;  2VK9 A;  4A3K L;  3HOV L;  2LKM B;  2A69 D;  1V9M A;  2PMZ A;  1PT1 A;  3KYW A;  1IS1 A;  2B9S B;  1SFO L;  2JIM A;  2VPW A;  2A68 D;  1PFY A;  4YWL A;  3X2L A;  4FFT A;  4C2M A;  5C4X L;  3HAX C;  3X2P A;  4NOK A;  3TM7 B;  1FDI A;  2JA6 A;  3LPE B;  2FIP A;  2NVQ L;  4NOL A;  3PKI A;  4A3B L;  2NVX A;  4XGH A;  3GTK L;  2BE5 D;  2E2J L;  4AYB A;  2E2I A;  1I6H L;  3LR6 A;  3O5A A;  1K4S A;  2AYJ A;  3K35 A;  2PYA A;  3X2J A;  4C5U A;  1ZYR D;  3I4N L;  1MIU A;  2E7Z A;  1E8J A;  2JA8 L;  4C5S A;  3EZA A;  2Z3R B;  3DU6 A;  3LHP S;  5C3E L;  5M3M L;  3PZA A;  4A3E L;  4O26 A;  1B2J A;  3GTP L;  2N1D B;  5JVH 1;  4AVR A;  3WWN B;  3SUM A;  8RXN A;  3S1R L;  1Y1W L;  3HOZ L;  1KQF A;  3U44 A;  1RR8 C;  1LKM A;  5DM6 1;  3S14 L;  1PFV A;  1YK5 A;  1SMY D;  3S15 L;  4FGU A;  1Y1V A;  5M3F L;  1S3S A;  2ZIX A;  5DYG A;  2X0Q A;  2CKA A;  1I3Q L;  4BBS L;  2PSM C;  3HOY L;  4AI3 A;  4IP9 A;  3H0G L;  2AUS B;  1WQF A;  3SUK A;  3M3G A;  3M3Y L;  2Z3Q B;  2M6P A;  5GM9 A;  1NXG A;  3LWR B;  3HJW B;  4A3M L;  1DX8 A;  4C3J L;  2PPT A;  3QQ7 A;  2HWG A;  1VZI A;  3NFP I;  5FTN A;  2M4V A;  3GTL L;  1EU1 A;  2PJH B;  1WQH A;  3GTM L;  1R9T L;  1RB9 A;  1Y69 8;  3PWF A;  5IYC L;  4AHZ A;  1PPY A;  4JCW A;  3HKZ P;  3GTJ A;  4GFQ A;  1BQ8 A;  3GTG L;  3IR5 A;  1QQT A;  1HQM D;  5MFZ A;  5GLF A;  1HD5 A;  1A36 A;  5MFP A;  1RWD A;  2HVY C;  1OA7 A;  4FBS A;  1Z92 B;  5AI3 A;  5H1S c;  2B5I D;  3WVO A;  3LWP B;  1CAD A;  2H12 A;  2PI8 A;  2ERJ A;  4JAG A;  2R92 A;  4CRZ A;  3CQZ A;  1RRJ A;  1LKP A;  3B0A B;  1SMM A;  5T5I D;  1TWC L;  2JA7 L;  2XJU A;  4A3I L;  2GMG A;  1OA9 A;  2R93 A;  1PZX A;  1PFU A;  4RXN A;  3SJR A;  3RZD L;  1AW8 B;  1K83 A;  3QQC E;  3KYX A;  1NH3 A;  1WCM A;  4QCL A;  2MQA A;  3PLX B;  5IYD L;  2LPJ A;  2JIO A;  5FTL A;  1R7R A;  1GE9 A;  4GS7 D;  4FER A;  1EJ9 A;  4KDI A;  3FDJ A;  1F4L A;  2R7Z A;  2JA6 L;  1QCS A;  2NVX L;  5AI2 A;  2EZC A;  3P8B A;  2E2I L;  4C3I L;  3K5L A;  4AI2 A;  1BRF A;  1OWB A;  2QL0 A;  1ZRP A;  1SIW A;  3KYV A;  5MLC 9;  2Y0N A;  2HCZ X;  2X0P A;  3PKJ A;  4AR4 A;  3K7A L;  3S17 L;  3KYY A;  2VPX A;  1EH1 A;  1S30 A;  5JVG 1;  4KAW X;  3K5O A;  4KDL A;  4AHW A;  4DMR A;  2YUJ A;  2JA5 A;  2V0E A;  3LWV B;  3A44 A;  4L8I A;  1CAA A;  4A3G L;  3GTO L;  3HJY B;  1CR5 A;  2VPY A;  1CZ5 A;  5MLC 3;  3OUG A;  1TWH A;  2ENG A;  3HOX L;  5GAG c;  4JAE A;  4AI0 A;  3D30 A;  2ERS A;  5EPP A;  1YUZ A;  1T6P A;  1NXE A;  4TPU A;  4EJ3 A;  4BY7 L;  3SS2 A;  5RXN A;  2LPI A;  4D3Z A;  2DSX A;  4CQ5 A;  2XJS A;  4FG2 A;  3IAY A;  1BW4 A;  2JIQ A;  2VPZ A;  5C4J L;  2E2H A;  1N10 A;  3B08 B;  2XJR A;  1TMO A;  2BH0 A;  1SMU A;  3KYU A;  5AN9 H;  3SUL A;  3TIW A;  2IV2 X;  1R5Z A;  5EIO C;  5FTM A;  2Y0S P;  3GTJ L;  2NYD A;  3K59 A;  3LRD A;  4U67 1;  2PNW A;  1LTL A;  1A31 A;  5M5X L;  2LYI A;  2LCQ A;  3ML1 A;  2CR8 A;  1ISE A;  4E6Y A;  4JP7 A;  3ENG A;  5IZ2 A;  1TGO A;  1R27 A;  3IR6 A;  4ENG A;  3S2D L;  4YWM A;  4AHC A;  3K58 A;  4V2R A;  2PVE A;  1TWG A;  4JLR C;  3X2M A;  2R92 L;  2MS3 A;  3CQZ L;  1YK4 A;  5GLY A;  3H9C A;  2M4Y A;  2GAE A;  4JAD A;  4C2M 1;  1S24 A;  2V0F A;  1UHD A;  1JYB A;  2EY4 E;  3RZ6 A;  2JI1 A;  1K4T A;  1SEU A;  1T9O A;  4FYD A;  4AON B;  1TL8 A;  3S2H L;  2R93 L;  6RXN A;  4V19 6;  4AZD A;  4QIW P;  2C6A A;  5MGN A;  1K83 L;  1WCM L;  3LWO B;  4BY1 L;  2CW0 D;  4AAY A;  3QQ8 A;  4GA6 A;  1DVB A;  1R0J A;  4AN8 A;  2C6B A;  3MAQ A;  4CS0 A;  3LNL A;  4Y7N L;  1I50 A;  4AI1 A;  1SC7 A;  4ME3 A;  3M4O L;  2RDV A;  1PT0 A;  2R7Z L;  3GTK A;  5GAE c;  2NVT L;  1IRN A; 
#chains in the Genus database with same CATH homology
 2JIP A;  1E60 A;  1Q8I A;  3RZT A;  1T9P A;  4KB2 A;  2YU9 A;  1R49 A;  2AE0 X;  2JI2 A;  3VPB E;  2G6G A;  4RV0 A;  1PQF A;  3FKI A;  5C1B A;  4NOM A;  2KN9 A;  5DM7 1;  1RDV A;  1AA6 A;  4AR6 A;  3MPS A;  4WFN 1;  4ZN3 B;  4H3T A;  3GTP A;  1KQG A;  1BQ9 A;  2MX9 A;  2JI3 A;  4LHL A;  1I6V D;  2XJP A;  1WLF A;  2PIC A;  1G8J A;  2V3V A;  1E5V A;  1EK8 A;  2EEO B;  3H0G A;  3K5N A;  4KDD A;  1QDN A;  1VC3 B;  3HU1 A;  4NOH A;  4KO8 A;  4K9F A;  1R0G A;  5GAD c;  5MF6 A;  3HKZ A;  1Y5I A;  4AHX A;  2VL6 A;  3IR7 A;  2KI8 A;  5CQG A;  1NNQ A;  2F4Q A;  3GTQ A;  1DD5 A;  3RYG A;  1PQE A;  3LR8 A;  1ZC1 A;  1A35 A;  2A6E D;  1B13 A;  1FDO A;  3PIO 1;  5FTJ A;  1IW7 D;  1R0F A;  2K2D A;  3HU2 A;  5GAH c;  3P9A A;  2G5D A;  1YLE A;  3K5M A;  3IU3 I;  1H7V A;  2R4G A;  3QVD A;  4ZN1 B;  1PYQ A;  5T5M D;  2B63 A;  2AQL A;  4D7Z B;  2O5J D;  1B71 A;  4POG A;  4CRY G;  4TVM A;  5JSN B;  1TWF A;  1RDG A;  2VUM A;  1E18 A;  1E61 A;  3DU5 A;  1S2Z A;  4AR3 A;  4KB4 A;  4LMO A;  4FXD A;  1UHE A;  4LHN A;  1TWA A;  5C9H A;  3MSU A;  2NVY A;  4CEJ A;  3M4A A;  3J7Z 1;  4AR5 A;  5FTK A;  4IP8 A;  2M6O A;  1OGY A;  5C18 A;  4GA5 A;  4F3E A;  3GTO A;  1YNJ D;  1LPQ A;  1SFO A;  1WJV A;  1LKO A;  4POF A;  3J7Y 1;  5IY0 A;  3U4Q A;  3KYL A;  2WB1 A;  2DMR A;  1QYB A;  2L0Z A;  2X0O A;  2NYA A;  2XJT A;  4D3Y A;  2J9U B;  2A6H D;  2XJV A;  1H5N A;  2JIR A;  4UY8 1;  3PIP 1;  1IU5 A;  1IU6 A;  3HU3 A;  1QCV A;  1ODH A;  3ZG6 A;  4AHY A;  4AOK B;  2FIO A;  5B6C A;  1Y4Z A;  1VCX A;  3P2A A;  1PQH A;  1VZH A;  1RYT A;  2Y0S A;  1FHH A;  1T9Q A;  4B8C D;  3K57 A;  1E32 A;  1YV1 A;  1VZG A;  1Y1W A;  3LF9 A;  4OYD B;  1OWC A;  2WAQ A;  2F5J A;  1I3Q A;  2V3B B;  1BE7 A;  1SMW A;  2MX8 A;  2PVX A;  1WQG A;  1DMS A;  2V45 A;  1PYU B;  5JSB B;  5DYI A;  3QC8 A;  4QIW A;  1B2O A;  5K2M E;  2XJQ A;  3GTL A;  1C09 A;  3GTM A;  1CZ4 A;  2LTH A;  4CEH A;  1R9T A;  2CKC A;  1R0I A;  3CZB A;  3GTG A;  1R0H A;  4CEI A;  4Q5G A;  4KLN A;  4XXB B;  3CF2 A;  4KC6 A;  1YNN D;  2K3N A;  2K3O A;  1YUX A;  3QWZ A;  1Q16 A;  3WWL A;  4Q5V A;  1IRO A;  1FHM A;  4G6B A;  1DMR A;  2NAP A;  4JAF A;  2N3E A;  1TWC A;  2K3Q A;  2JA7 A;  2HR5 A;  1G8K A;  1H0H A;  1T8I A;  1BFY A;  1RYQ A;  4KOD A;  2KKD A;  3LR2 A;  7RXN A;  2C45 A;  2PJJ A;  3DMR A;  5EIN C;  2VK9 A;  2LKM B;  2A69 D;  1V9M A;  2PMZ A;  1PT1 A;  3KYW A;  1IS1 A;  2B9S B;  2JIM A;  2VPW A;  2A68 D;  4YWL A;  4C2M A;  4NOK A;  3TM7 B;  1FDI A;  2JA6 A;  3LPE B;  2FIP A;  4NOL A;  3PKI A;  2NVX A;  4XGH A;  2BE5 D;  4AYB A;  2E2I A;  3LR6 A;  3O5A A;  1K4S A;  2AYJ A;  3K35 A;  2PYA A;  1ZYR D;  1MIU A;  2E7Z A;  1E8J A;  2Z3R B;  3DU6 A;  3LHP S;  3PZA A;  4O26 A;  1B2J A;  2N1D B;  5JVH 1;  3WWN B;  8RXN A;  1KQF A;  3U44 A;  1RR8 C;  1LKM A;  5DM6 1;  1YK5 A;  1SMY D;  4FGU A;  1Y1V A;  1S3S A;  2ZIX A;  5DYG A;  2X0Q A;  2CKA A;  2PSM C;  4AI3 A;  4IP9 A;  1WQF A;  2Z3Q B;  2M6P A;  1NXG A;  1DX8 A;  3QQ7 A;  2PPT A;  1VZI A;  3NFP I;  5FTN A;  2M4V A;  1EU1 A;  2PJH B;  1WQH A;  1RB9 A;  1Y69 8;  3PWF A;  4AHZ A;  1PPY A;  3GTJ A;  4GFQ A;  1BQ8 A;  3IR5 A;  1HQM D;  5MFZ A;  5GLF A;  1A36 A;  5MFP A;  1RWD A;  4FBS A;  1Z92 B;  5AI3 A;  5H1S c;  2B5I D;  3WVO A;  1CAD A;  2H12 A;  2PI8 A;  2ERJ A;  4JAG A;  2R92 A;  4CRZ A;  3CQZ A;  1RRJ A;  1LKP A;  3B0A B;  1SMM A;  5T5I D;  2XJU A;  2GMG A;  2R93 A;  4RXN A;  3SJR A;  1AW8 B;  1K83 A;  3QQC E;  3KYX A;  1NH3 A;  1WCM A;  4QCL A;  2MQA A;  3PLX B;  2LPJ A;  2JIO A;  5FTL A;  1R7R A;  1GE9 A;  4GS7 D;  1EJ9 A;  4KDI A;  2R7Z A;  1QCS A;  5AI2 A;  3P8B A;  3K5L A;  4AI2 A;  1BRF A;  1OWB A;  2QL0 A;  1ZRP A;  1SIW A;  3KYV A;  5MLC 9;  2Y0N A;  2X0P A;  3PKJ A;  4AR4 A;  3KYY A;  2VPX A;  1EH1 A;  1S30 A;  5JVG 1;  4KAW X;  3K5O A;  4KDL A;  4AHW A;  4DMR A;  2YUJ A;  2JA5 A;  2V0E A;  3A44 A;  4L8I A;  1CAA A;  1CR5 A;  2VPY A;  1CZ5 A;  5MLC 3;  3OUG A;  1TWH A;  5GAG c;  4JAE A;  4AI0 A;  2ERS A;  5EPP A;  1YUZ A;  1NXE A;  4TPU A;  4EJ3 A;  3SS2 A;  5RXN A;  2LPI A;  4D3Z A;  2DSX A;  2XJS A;  3IAY A;  2JIQ A;  2VPZ A;  2E2H A;  1TMO A;  3B08 B;  2XJR A;  1SMU A;  3KYU A;  5AN9 H;  3TIW A;  2IV2 X;  1R5Z A;  5EIO C;  5FTM A;  2NYD A;  3K59 A;  3LRD A;  4U67 1;  2PNW A;  1LTL A;  1A31 A;  2LYI A;  2LCQ A;  3ML1 A;  2CR8 A;  1ISE A;  4E6Y A;  5IZ2 A;  1TGO A;  1R27 A;  3IR6 A;  4YWM A;  4AHC A;  3K58 A;  2PVE A;  1TWG A;  4JLR C;  2MS3 A;  1YK4 A;  2M4Y A;  2GAE A;  4JAD A;  1S24 A;  2V0F A;  1UHD A;  1JYB A;  3RZ6 A;  2JI1 A;  1K4T A;  1SEU A;  1T9O A;  4FYD A;  4AON B;  1TL8 A;  6RXN A;  4V19 6;  4AZD A;  2C6A A;  5MGN A;  2CW0 D;  4AAY A;  3QQ8 A;  4GA6 A;  1DVB A;  1R0J A;  4AN8 A;  2C6B A;  3MAQ A;  4CS0 A;  3LNL A;  1I50 A;  4AI1 A;  1SC7 A;  4ME3 A;  2RDV A;  1PT0 A;  3GTK A;  5GAE c;  1IRN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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