2OF5A

Oligomeric death domain complex
Total Genus 26
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
91
structure length
91
Chain Sequence
HILNSSPSDRQINQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSLHNGLRAVEVDPSLLLHMLE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Apoptosis
molecule keywords Death domain-containing protein CRADD
publication title Death domain assembly mechanism revealed by crystal structure of the oligomeric PIDDosome core complex.
pubmed doi rcsb
source organism Homo sapiens
total genus 26
structure length 91
sequence length 91
chains with identical sequence B, C, D, E, F, G
ec nomenclature
pdb deposition date 2007-01-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00531 Death Death domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 2of5A00
2P1HA 2LWEA 4M9ZA 4P4HA 4IZ7B 2N80A 3CRDA 2L6AA 4JQWA 4E9MA 1CY5A 2NZ7A 3QF2A 2M5VA 1UCPA 4A2WA 2YGSA 1N3KA 2MPCA 4JUPA 4ZBWA 1A1ZA 2DO9A 4M9XA 3CL3A 4QOBA 4LWDA 2NSNA 2DBFA 2A9IA 2IB1A 2YQFA 2N1FA 2G7RA 2N97A 2OF5H 4O9FA 1C15A 4NQKA 3LQQA 3MOPG 4M9SA 4DWNA 2GF5A 2MB9A 2N83A 4N1KA 1Z6TA 1WH4A 2MN4A 4F42A 3KATA 2BBRA 2DBDA 2VGQA 2O71A 1FADA 3YGSC 2L9MA 2KM6A 1WMGA 4EWIA 1NGRA 4A2QA 3MOPA 1E3YA 2MS8A 3LQRA 2LWDA 2NAQA 1YGOA 3EZQA 2N7ZA 4I16A 4RHWA 2LS7A 4D8OA 1E41A 4N1LA 4O7QA 2DBHA 2N00A 2HM2Q 3J6JA 3J63A 4N1JA 2YU0A 2OF5A 4FH0A 3YGSP 2D96A 3T6PA 1PN5A 1D2ZA 4O6XA 4F44A 4UZ0A 3MOPK 1DDFA 1ICHA 2DBGA 1WXPA 1D2ZB 1CWWA 2BBZA 4IZ5E 2MS7A 1DGNA 4O9LA 2YVIA 2B1WA 1A1WA 3EZQB 2KN6A 4IZAB 4P4HI 2A5YB 4RHWE 2F1SA
chains in the Genus database with same CATH superfamily
2P1HA 2LWEA 4M9ZA 4P4HA 4IZ7B 2N80A 3CRDA 2L6AA 4JQWA 4E9MA 1CY5A 2NZ7A 3QF2A 2M5VA 1UCPA 4A2WA 2YGSA 1N3KA 2MPCA 4JUPA 4ZBWA 1A1ZA 2DO9A 4M9XA 3CL3A 4QOBA 4LWDA 2NSNA 2DBFA 2A9IA 2IB1A 2YQFA 2N1FA 2G7RA 2N97A 2OF5H 4O9FA 1C15A 4NQKA 3LQQA 3MOPG 4M9SA 4DWNA 2GF5A 2MB9A 2N83A 4N1KA 1Z6TA 1WH4A 2MN4A 4F42A 3KATA 2BBRA 2DBDA 2VGQA 2O71A 1FADA 3YGSC 2XV9A 2L9MA 2KM6A 1WMGA 4EWIA 1NGRA 4A2QA 3MOPA 1E3YA 2MS8A 3LQRA 2LWDA 2NAQA 1YGOA 3EZQA 2N7ZA 4I16A 4RHWA 2LS7A 4D8OA 1E41A 4N1LA 4O7QA 2DBHA 2N00A 2HM2Q 3J6JA 3J63A 4N1JA 2YU0A 2OF5A 4FH0A 3YGSP 2D96A 3T6PA 1PN5A 1D2ZA 4O6XA 4F44A 4UZ0A 3MOPK 1DDFA 1ICHA 2DBGA 1WXPA 1D2ZB 1CWWA 2BBZA 4IZ5E 2MS7A 1DGNA 4O9LA 2YVIA 2B1WA 1A1WA 3EZQB 2KN6A 4IZAB 4P4HI 2A5YB 4RHWE 2MJMA 2F1SA
chains in the Genus database with same CATH topology
2P1HA 2LWEA 4M9ZA 4P4HA 4IZ7B 2N80A 3CRDA 2L6AA 4JQWA 4E9MA 1CY5A 2NZ7A 3QF2A 2M5VA 1UCPA 4A2WA 2YGSA 1N3KA 2MPCA 4JUPA 4ZBWA 1A1ZA 2DO9A 4M9XA 3CL3A 4QOBA 4LWDA 2NSNA 2DBFA 2A9IA 2IB1A 2YQFA 2N1FA 2G7RA 2N97A 2OF5H 4O9FA 1C15A 4NQKA 3LQQA 3MOPG 4M9SA 4DWNA 2GF5A 2MB9A 2N83A 4N1KA 1Z6TA 1WH4A 2MN4A 4F42A 3KATA 2BBRA 2DBDA 2VGQA 2O71A 1FADA 3YGSC 2XV9A 2L9MA 2KM6A 1WMGA 4EWIA 1NGRA 4A2QA 3MOPA 1E3YA 2MS8A 3LQRA 2LWDA 2NAQA 1YGOA 3EZQA 2N7ZA 4I16A 4RHWA 2LS7A 4D8OA 1E41A 4N1LA 4O7QA 2DBHA 2N00A 2HM2Q 3J6JA 3J63A 4N1JA 2YU0A 2OF5A 4FH0A 3YGSP 2D96A 3T6PA 1PN5A 1D2ZA 4O6XA 4F44A 4UZ0A 3MOPK 1DDFA 1ICHA 2DBGA 1WXPA 1D2ZB 1CWWA 2BBZA 4IZ5E 2MS7A 1DGNA 4O9LA 2YVIA 2B1WA 1A1WA 3EZQB 2KN6A 4IZAB 4P4HI 2A5YB 4RHWE 2MJMA 2F1SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2P1H A;  2LWE A;  4M9Z A;  4P4H A;  4IZ7 B;  2N80 A;  3CRD A;  2L6A A;  4JQW A;  4E9M A;  1CY5 A;  2NZ7 A;  3QF2 A;  2M5V A;  1UCP A;  4A2W A;  2YGS A;  1N3K A;  2MPC A;  4JUP A;  4ZBW A;  1A1Z A;  2DO9 A;  4M9X A;  3CL3 A;  4QOB A;  4LWD A;  2NSN A;  2DBF A;  2A9I A;  2IB1 A;  2YQF A;  2N1F A;  2G7R A;  2N97 A;  2OF5 H;  4O9F A;  1C15 A;  4NQK A;  3LQQ A;  3MOP G;  4M9S A;  4DWN A;  2GF5 A;  2MB9 A;  2N83 A;  4N1K A;  1Z6T A;  1WH4 A;  2MN4 A;  4F42 A;  3KAT A;  2BBR A;  2DBD A;  2VGQ A;  2O71 A;  1FAD A;  3YGS C;  2L9M A;  2KM6 A;  1WMG A;  4EWI A;  1NGR A;  4A2Q A;  3MOP A;  1E3Y A;  2MS8 A;  3LQR A;  2LWD A;  2NAQ A;  1YGO A;  3EZQ A;  2N7Z A;  4I16 A;  4RHW A;  2LS7 A;  4D8O A;  1E41 A;  4N1L A;  4O7Q A;  2DBH A;  2N00 A;  2HM2 Q;  3J6J A;  3J63 A;  4N1J A;  2YU0 A;  2OF5 A;  4FH0 A;  3YGS P;  2D96 A;  3T6P A;  1PN5 A;  1D2Z A;  4O6X A;  4F44 A;  4UZ0 A;  3MOP K;  1DDF A;  1ICH A;  2DBG A;  1WXP A;  1D2Z B;  1CWW A;  2BBZ A;  4IZ5 E;  2MS7 A;  1DGN A;  4O9L A;  2YVI A;  2B1W A;  1A1W A;  3EZQ B;  2KN6 A;  4IZA B;  4P4H I;  2A5Y B;  4RHW E;  2F1S A; 
#chains in the Genus database with same CATH topology
 2P1H A;  2LWE A;  4M9Z A;  4P4H A;  4IZ7 B;  2N80 A;  3CRD A;  2L6A A;  4JQW A;  4E9M A;  1CY5 A;  2NZ7 A;  3QF2 A;  2M5V A;  1UCP A;  4A2W A;  2YGS A;  1N3K A;  2MPC A;  4JUP A;  4ZBW A;  1A1Z A;  2DO9 A;  4M9X A;  3CL3 A;  4QOB A;  4LWD A;  2NSN A;  2DBF A;  2A9I A;  2IB1 A;  2YQF A;  2N1F A;  2G7R A;  2N97 A;  2OF5 H;  4O9F A;  1C15 A;  4NQK A;  3LQQ A;  3MOP G;  4M9S A;  4DWN A;  2GF5 A;  2MB9 A;  2N83 A;  4N1K A;  1Z6T A;  1WH4 A;  2MN4 A;  4F42 A;  3KAT A;  2BBR A;  2DBD A;  2VGQ A;  2O71 A;  1FAD A;  3YGS C;  2XV9 A;  2L9M A;  2KM6 A;  1WMG A;  4EWI A;  1NGR A;  4A2Q A;  3MOP A;  1E3Y A;  2MS8 A;  3LQR A;  2LWD A;  2NAQ A;  1YGO A;  3EZQ A;  2N7Z A;  4I16 A;  4RHW A;  2LS7 A;  4D8O A;  1E41 A;  4N1L A;  4O7Q A;  2DBH A;  2N00 A;  2HM2 Q;  3J6J A;  3J63 A;  4N1J A;  2YU0 A;  2OF5 A;  4FH0 A;  3YGS P;  2D96 A;  3T6P A;  1PN5 A;  1D2Z A;  4O6X A;  4F44 A;  4UZ0 A;  3MOP K;  1DDF A;  1ICH A;  2DBG A;  1WXP A;  1D2Z B;  1CWW A;  2BBZ A;  4IZ5 E;  2MS7 A;  1DGN A;  4O9L A;  2YVI A;  2B1W A;  1A1W A;  3EZQ B;  2KN6 A;  4IZA B;  4P4H I;  2A5Y B;  4RHW E;  2MJM A;  2F1S A; 
#chains in the Genus database with same CATH homology
 2P1H A;  2LWE A;  4M9Z A;  4P4H A;  4IZ7 B;  2N80 A;  3CRD A;  2L6A A;  4JQW A;  4E9M A;  1CY5 A;  2NZ7 A;  3QF2 A;  2M5V A;  1UCP A;  4A2W A;  2YGS A;  1N3K A;  2MPC A;  4JUP A;  4ZBW A;  1A1Z A;  2DO9 A;  4M9X A;  3CL3 A;  4QOB A;  4LWD A;  2NSN A;  2DBF A;  2A9I A;  2IB1 A;  2YQF A;  2N1F A;  2G7R A;  2N97 A;  2OF5 H;  4O9F A;  1C15 A;  4NQK A;  3LQQ A;  3MOP G;  4M9S A;  4DWN A;  2GF5 A;  2MB9 A;  2N83 A;  4N1K A;  1Z6T A;  1WH4 A;  2MN4 A;  4F42 A;  3KAT A;  2BBR A;  2DBD A;  2VGQ A;  2O71 A;  1FAD A;  3YGS C;  2XV9 A;  2L9M A;  2KM6 A;  1WMG A;  4EWI A;  1NGR A;  4A2Q A;  3MOP A;  1E3Y A;  2MS8 A;  3LQR A;  2LWD A;  2NAQ A;  1YGO A;  3EZQ A;  2N7Z A;  4I16 A;  4RHW A;  2LS7 A;  4D8O A;  1E41 A;  4N1L A;  4O7Q A;  2DBH A;  2N00 A;  2HM2 Q;  3J6J A;  3J63 A;  4N1J A;  2YU0 A;  2OF5 A;  4FH0 A;  3YGS P;  2D96 A;  3T6P A;  1PN5 A;  1D2Z A;  4O6X A;  4F44 A;  4UZ0 A;  3MOP K;  1DDF A;  1ICH A;  2DBG A;  1WXP A;  1D2Z B;  1CWW A;  2BBZ A;  4IZ5 E;  2MS7 A;  1DGN A;  4O9L A;  2YVI A;  2B1W A;  1A1W A;  3EZQ B;  2KN6 A;  4IZA B;  4P4H I;  2A5Y B;  4RHW E;  2MJM A;  2F1S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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