2P13A

Transporter associated domain corc_hlyc from nitrosomonas europaea
Total Genus 21
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
85
structure length
85
Chain Sequence
EKVVAEQQADGTWLMDGWISIRKASNLLEHDLVDEAERYSTLGGYLLWQFGYIPAAGEQITVDGLIFEIVSVNKHNIGKVRVHRT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Structural genomics, unknown function
molecule keywords CBS domain
publication title The crystal structure of the transporter associated domain CorC_HlyC from Nitrosomonas europaea
rcsb
source organism Nitrosomonas europaea
total genus 21
structure length 85
sequence length 85
chains with identical sequence B
ec nomenclature
pdb deposition date 2007-03-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03471 CorC_HlyC Transporter associated domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2p13A00
1FIQB 1N61C 4JAYA 5HMRA 1WVFA 4ZOHB 1V97A 5HQXA 2W54A 3BW7A 4BC9A 4BCAA 1FFUC 2W55A 2P13A 3LAEA 5AE3A 1FO4A 2BVHA 1W1RA 2YVSA 2QKNA 1W1LA 4ML8A 3KJMA 3SR6B 2RK5A 2R2ZA 1N5WC 3S1EA 5FXEA 5FXDA 1W1KA 1ZR6A 2NQWA 2VFUA 4PYTA 2VFRA 3AM9A 4BBYA 1QLTA 2GQUA 1JROA 2QPMA 1F0XA 1W1SA 3DQ0A 5AE2A 3S1DA 1QLUA 2O3GA 3B9JB 1MBTA 5FXFA 1E0YA 3NVWB 4HG0A 1VAOA 3TX1A 2R8DA 2GQTA 3DEDA 2VFVA 1E8GA 2OAIA 1UXYA 4XLOA 3S1FA 3S1CA 1E8FA 3NVVB 1W1JA 5HHZA 3NVZB 1AHUA 2Q85A 2VAOA 1WVEA 4BC7A 2P3HA 2AXRA 2PLSA 1WYGA 1T3QC 2EXRA 3C0PA 4OALA 3LLBA 3EUB3 3NS1B 3NRZB 1AHZA 3ETRB 1ZXIC 1W1QA 1I19A 2VFTA 4O95A 5G5GB 3NVYB 1W1OA 2I0KA 2MBRA 3W8WA 3AMZA 5G5HB 2Q4WA 2W3SA 1E8HA 3W8XA 1N60C 2P4PA 2VFSA 3W8ZA 1HSKA 5ADZA 1W1MA 2PLIA 2W3RA 1VDVA 3AN1A 1AHVA 1DZNA 1MBBA 2BVGA 5AE1A 1RM6B 5FXPA 1FFVC 2E3TA 4JB1A 2BVFA 3HRDC 1N63C 3JS8A 4MLAA 3I99A 1SB3B 1DIQA 1DIIA 3PM9A 1N5XA 1JRPA 1N62C
chains in the Genus database with same CATH superfamily
1FIQB 1N61C 4JAYA 5HMRA 1WVFA 4ZOHB 1V97A 4PWCA 2W54A 3BW7A 3VTEA 4BC9A 3FW9A 5HQXA 3D2HA 4BCAA 4EC3A 1FFUC 3D2JA 2W55A 2P13A 3D2DA 3LAEA 5AE3A 4DNSA 1FO4A 2BVHA 1W1RA 2YVSA 4UD8A 3RJ8A 2QKNA 1W1LA 4ML8A 3KJMA 3SR6B 5AWVA 2RK5A 2R2ZA 1N5WC 5I1WA 3S1EA 5FXEA 2Y08A 2WDWA 5FXDA 1W1KA 1ZR6A 2NQWA 2VFUA 4PYTA 2VFRA 3AM9A 4BBYA 1QLTA 2GQUA 4PVHA 1JROA 2QPMA 1F0XA 1W1SA 3DQ0A 5AE2A 3S1DA 1QLUA 2O3GA 3B9JB 1MBTA 5FXFA 1E0YA 3NVWB 5K8EA 4HG0A 1VAOA 3TX1A 2R8DA 2GQTA 3DEDA 2UUVA 2VFVA 1E8GA 2OAIA 1UXYA 4XLOA 3S1FA 3S1CA 1E8FA 3NVVB 1W1JA 5HHZA 3NVZB 1AHUA 2Q85A 2VAOA 4PVKA 1WVEA 4BC7A 2P3HA 2AXRA 2PLSA 3FWAA 1WYGA 1T3QC 2EXRA 3C0PA 3HSUA 4OALA 3TSHA 4PWBA 3LLBA 3EUB3 3NS1B 3NRZB 1AHZA 3ETRB 1ZXIC 5L6GA 1W1QA 1I19A 2VFTA 4O95A 3TSJA 5D79A 5G5GB 3NVYB 1W1OA 2I0KA 2MBRA 3FW8A 3W8WA 3AMZA 5G5HB 2Q4WA 2W3SA 1E8HA 3W8XA 1N60C 2P4PA 2VFSA 3W8ZA 1HSKA 5ADZA 1W1MA 4PVJA 2PLIA 2UUUA 2W3RA 1VDVA 3AN1A 3GSYA 3PQBA 1AHVA 1DZNA 4PVEA 5L6FA 1MBBA 2BVGA 3POPA 5AE1A 2IPIA 1RM6B 5FXPA 2Y4GA 1FFVC 2E3TA 3RJAA 4JB1A 5I1VA 2BVFA 3HRDC 1N63C 3JS8A 4PZFA 4MLAA 3I99A 1SB3B 1DIQA 3FW7A 1DIIA 3PM9A 1N5XA 2Y3SA 1JRPA 2Y3RA 1N62C
chains in the Genus database with same CATH topology
1FIQB 1N61C 4JAYA 5HMRA 1WVFA 4ZOHB 1V97A 4PWCA 2W54A 3BW7A 3VTEA 4BC9A 3FW9A 5HQXA 3D2HA 4BCAA 4EC3A 1FFUC 3D2JA 2W55A 2P13A 3D2DA 3LAEA 5AE3A 4DNSA 1FO4A 2BVHA 1W1RA 2YVSA 4UD8A 3RJ8A 2QKNA 1W1LA 4ML8A 3KJMA 3SR6B 5AWVA 2RK5A 2R2ZA 1N5WC 5I1WA 3S1EA 5FXEA 2Y08A 2WDWA 5FXDA 1W1KA 1ZR6A 2NQWA 2VFUA 4PYTA 2VFRA 3AM9A 4BBYA 1QLTA 2GQUA 4PVHA 1JROA 2QPMA 1F0XA 1W1SA 3DQ0A 5AE2A 3S1DA 1QLUA 2O3GA 3B9JB 1MBTA 5FXFA 1E0YA 3NVWB 5K8EA 4HG0A 1VAOA 3TX1A 2R8DA 2GQTA 3DEDA 2UUVA 2VFVA 1E8GA 2OAIA 1UXYA 4XLOA 3S1FA 3S1CA 1E8FA 3NVVB 1W1JA 5HHZA 3NVZB 1AHUA 2Q85A 2VAOA 4PVKA 1WVEA 4BC7A 2P3HA 2AXRA 2PLSA 3FWAA 1WYGA 1T3QC 2EXRA 3C0PA 3HSUA 4OALA 3TSHA 4PWBA 3LLBA 3EUB3 3NS1B 3NRZB 1AHZA 3ETRB 1ZXIC 5L6GA 1W1QA 1I19A 2VFTA 4O95A 3TSJA 5D79A 5G5GB 3NVYB 1W1OA 2I0KA 2MBRA 3FW8A 3W8WA 3AMZA 5G5HB 2Q4WA 2W3SA 1E8HA 3W8XA 1N60C 2P4PA 2VFSA 3W8ZA 1HSKA 5ADZA 1W1MA 4PVJA 2PLIA 2UUUA 2W3RA 1VDVA 3AN1A 3GSYA 3PQBA 1AHVA 1DZNA 4PVEA 5L6FA 1MBBA 2BVGA 3POPA 5AE1A 2IPIA 1RM6B 5FXPA 2Y4GA 1FFVC 2E3TA 3RJAA 4JB1A 5I1VA 2BVFA 3HRDC 1N63C 3JS8A 4PZFA 4MLAA 3I99A 1SB3B 1DIQA 3FW7A 1DIIA 3PM9A 1N5XA 2Y3SA 1JRPA 2Y3RA 1N62C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FIQ B;  1N61 C;  4JAY A;  5HMR A;  1WVF A;  4ZOH B;  1V97 A;  5HQX A;  2W54 A;  3BW7 A;  4BC9 A;  4BCA A;  1FFU C;  2W55 A;  2P13 A;  3LAE A;  5AE3 A;  1FO4 A;  2BVH A;  1W1R A;  2YVS A;  2QKN A;  1W1L A;  4ML8 A;  3KJM A;  3SR6 B;  2RK5 A;  2R2Z A;  1N5W C;  3S1E A;  5FXE A;  5FXD A;  1W1K A;  1ZR6 A;  2NQW A;  2VFU A;  4PYT A;  2VFR A;  3AM9 A;  4BBY A;  1QLT A;  2GQU A;  1JRO A;  2QPM A;  1F0X A;  1W1S A;  3DQ0 A;  5AE2 A;  3S1D A;  1QLU A;  2O3G A;  3B9J B;  1MBT A;  5FXF A;  1E0Y A;  3NVW B;  4HG0 A;  1VAO A;  3TX1 A;  2R8D A;  2GQT A;  3DED A;  2VFV A;  1E8G A;  2OAI A;  1UXY A;  4XLO A;  3S1F A;  3S1C A;  1E8F A;  3NVV B;  1W1J A;  5HHZ A;  3NVZ B;  1AHU A;  2Q85 A;  2VAO A;  1WVE A;  4BC7 A;  2P3H A;  2AXR A;  2PLS A;  1WYG A;  1T3Q C;  2EXR A;  3C0P A;  4OAL A;  3LLB A;  3EUB 3;  3NS1 B;  3NRZ B;  1AHZ A;  3ETR B;  1ZXI C;  1W1Q A;  1I19 A;  2VFT A;  4O95 A;  5G5G B;  3NVY B;  1W1O A;  2I0K A;  2MBR A;  3W8W A;  3AMZ A;  5G5H B;  2Q4W A;  2W3S A;  1E8H A;  3W8X A;  1N60 C;  2P4P A;  2VFS A;  3W8Z A;  1HSK A;  5ADZ A;  1W1M A;  2PLI A;  2W3R A;  1VDV A;  3AN1 A;  1AHV A;  1DZN A;  1MBB A;  2BVG A;  5AE1 A;  1RM6 B;  5FXP A;  1FFV C;  2E3T A;  4JB1 A;  2BVF A;  3HRD C;  1N63 C;  3JS8 A;  4MLA A;  3I99 A;  1SB3 B;  1DIQ A;  1DII A;  3PM9 A;  1N5X A;  1JRP A;  1N62 C; 
#chains in the Genus database with same CATH topology
 1FIQ B;  1N61 C;  4JAY A;  5HMR A;  1WVF A;  4ZOH B;  1V97 A;  4PWC A;  2W54 A;  3BW7 A;  3VTE A;  4BC9 A;  3FW9 A;  5HQX A;  3D2H A;  4BCA A;  4EC3 A;  1FFU C;  3D2J A;  2W55 A;  2P13 A;  3D2D A;  3LAE A;  5AE3 A;  4DNS A;  1FO4 A;  2BVH A;  1W1R A;  2YVS A;  4UD8 A;  3RJ8 A;  2QKN A;  1W1L A;  4ML8 A;  3KJM A;  3SR6 B;  5AWV A;  2RK5 A;  2R2Z A;  1N5W C;  5I1W A;  3S1E A;  5FXE A;  2Y08 A;  2WDW A;  5FXD A;  1W1K A;  1ZR6 A;  2NQW A;  2VFU A;  4PYT A;  2VFR A;  3AM9 A;  4BBY A;  1QLT A;  2GQU A;  4PVH A;  1JRO A;  2QPM A;  1F0X A;  1W1S A;  3DQ0 A;  5AE2 A;  3S1D A;  1QLU A;  2O3G A;  3B9J B;  1MBT A;  5FXF A;  1E0Y A;  3NVW B;  5K8E A;  4HG0 A;  1VAO A;  3TX1 A;  2R8D A;  2GQT A;  3DED A;  2UUV A;  2VFV A;  1E8G A;  2OAI A;  1UXY A;  4XLO A;  3S1F A;  3S1C A;  1E8F A;  3NVV B;  1W1J A;  5HHZ A;  3NVZ B;  1AHU A;  2Q85 A;  2VAO A;  4PVK A;  1WVE A;  4BC7 A;  2P3H A;  2AXR A;  2PLS A;  3FWA A;  1WYG A;  1T3Q C;  2EXR A;  3C0P A;  3HSU A;  4OAL A;  3TSH A;  4PWB A;  3LLB A;  3EUB 3;  3NS1 B;  3NRZ B;  1AHZ A;  3ETR B;  1ZXI C;  5L6G A;  1W1Q A;  1I19 A;  2VFT A;  4O95 A;  3TSJ A;  5D79 A;  5G5G B;  3NVY B;  1W1O A;  2I0K A;  2MBR A;  3FW8 A;  3W8W A;  3AMZ A;  5G5H B;  2Q4W A;  2W3S A;  1E8H A;  3W8X A;  1N60 C;  2P4P A;  2VFS A;  3W8Z A;  1HSK A;  5ADZ A;  1W1M A;  4PVJ A;  2PLI A;  2UUU A;  2W3R A;  1VDV A;  3AN1 A;  3GSY A;  3PQB A;  1AHV A;  1DZN A;  4PVE A;  5L6F A;  1MBB A;  2BVG A;  3POP A;  5AE1 A;  2IPI A;  1RM6 B;  5FXP A;  2Y4G A;  1FFV C;  2E3T A;  3RJA A;  4JB1 A;  5I1V A;  2BVF A;  3HRD C;  1N63 C;  3JS8 A;  4PZF A;  4MLA A;  3I99 A;  1SB3 B;  1DIQ A;  3FW7 A;  1DII A;  3PM9 A;  1N5X A;  2Y3S A;  1JRP A;  2Y3R A;  1N62 C; 
#chains in the Genus database with same CATH homology
 1FIQ B;  1N61 C;  4JAY A;  5HMR A;  1WVF A;  4ZOH B;  1V97 A;  4PWC A;  2W54 A;  3BW7 A;  3VTE A;  4BC9 A;  3FW9 A;  5HQX A;  3D2H A;  4BCA A;  4EC3 A;  1FFU C;  3D2J A;  2W55 A;  2P13 A;  3D2D A;  3LAE A;  5AE3 A;  4DNS A;  1FO4 A;  2BVH A;  1W1R A;  2YVS A;  4UD8 A;  3RJ8 A;  2QKN A;  1W1L A;  4ML8 A;  3KJM A;  3SR6 B;  5AWV A;  2RK5 A;  2R2Z A;  1N5W C;  5I1W A;  3S1E A;  5FXE A;  2Y08 A;  2WDW A;  5FXD A;  1W1K A;  1ZR6 A;  2NQW A;  2VFU A;  4PYT A;  2VFR A;  3AM9 A;  4BBY A;  1QLT A;  2GQU A;  4PVH A;  1JRO A;  2QPM A;  1F0X A;  1W1S A;  3DQ0 A;  5AE2 A;  3S1D A;  1QLU A;  2O3G A;  3B9J B;  1MBT A;  5FXF A;  1E0Y A;  3NVW B;  5K8E A;  4HG0 A;  1VAO A;  3TX1 A;  2R8D A;  2GQT A;  3DED A;  2UUV A;  2VFV A;  1E8G A;  2OAI A;  1UXY A;  4XLO A;  3S1F A;  3S1C A;  1E8F A;  3NVV B;  1W1J A;  5HHZ A;  3NVZ B;  1AHU A;  2Q85 A;  2VAO A;  4PVK A;  1WVE A;  4BC7 A;  2P3H A;  2AXR A;  2PLS A;  3FWA A;  1WYG A;  1T3Q C;  2EXR A;  3C0P A;  3HSU A;  4OAL A;  3TSH A;  4PWB A;  3LLB A;  3EUB 3;  3NS1 B;  3NRZ B;  1AHZ A;  3ETR B;  1ZXI C;  5L6G A;  1W1Q A;  1I19 A;  2VFT A;  4O95 A;  3TSJ A;  5D79 A;  5G5G B;  3NVY B;  1W1O A;  2I0K A;  2MBR A;  3FW8 A;  3W8W A;  3AMZ A;  5G5H B;  2Q4W A;  2W3S A;  1E8H A;  3W8X A;  1N60 C;  2P4P A;  2VFS A;  3W8Z A;  1HSK A;  5ADZ A;  1W1M A;  4PVJ A;  2PLI A;  2UUU A;  2W3R A;  1VDV A;  3AN1 A;  3GSY A;  3PQB A;  1AHV A;  1DZN A;  4PVE A;  5L6F A;  1MBB A;  2BVG A;  3POP A;  5AE1 A;  2IPI A;  1RM6 B;  5FXP A;  2Y4G A;  1FFV C;  2E3T A;  3RJA A;  4JB1 A;  5I1V A;  2BVF A;  3HRD C;  1N63 C;  3JS8 A;  4PZF A;  4MLA A;  3I99 A;  1SB3 B;  1DIQ A;  3FW7 A;  1DII A;  3PM9 A;  1N5X A;  2Y3S A;  1JRP A;  2Y3R A;  1N62 C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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