2P19A

Crystal structure of bacterial regulatory protein of gntr family from corynebacterium glutamicum
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
148
structure length
148
Chain Sequence
KNANLDPKTRVLEHRLLAASSAIAEKLGVSAGDEVLLIRRLRSTGDIPVAILENYLPPAFNDVSLDELEKGGLYDALRSRGVVLKIANQKIGARRAVGEESTLLDIEDGGPLLTVERVALDNSGQVIELGSHCYRPDMYNFETTLVAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords Transcriptional regulator
publication title The crystal structure of Bacterial regulatory protein of gntR family from Corynebacterium glutamicum
rcsb
source organism Corynebacterium glutamicum
total genus 35
structure length 148
sequence length 148
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-03-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07702 UTRA UTRA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1410.10 Alpha Beta 3-Layer(aba) Sandwich Chorismate lyase Chorismate lyase-like 2p19A01
3BWGA 2FA1A 4ZSKA 2P19A 2NWIA 3L5ZA 1XLRA 4U0VA 2OGGA 1G81A 2WV0A 4ZSBA 4ZSIA 1FW9A 2RA5A 3CNVA 2OOIA 3F8MA 3HFIA 2AHCA 1TT8A 4WWCA 3EETA 4U0WA 3F8LA 3LHEA 2IKKA 1G1BA 2PKHA 1JD3A 3DDVA 3EDPA
chains in the Genus database with same CATH superfamily
3BWGA 2FA1A 4ZSKA 2P19A 2NWIA 3L5ZA 1XLRA 4U0VA 2OGGA 1G81A 2WV0A 4ZSBA 4ZSIA 1FW9A 2RA5A 3CNVA 2OOIA 3F8MA 3HFIA 2AHCA 1TT8A 4WWCA 3EETA 4U0WA 3F8LA 3LHEA 2IKKA 1G1BA 2PKHA 1JD3A 3DDVA 3EDPA
chains in the Genus database with same CATH topology
3BWGA 2FA1A 4ZSKA 2P19A 2NWIA 3L5ZA 1XLRA 4U0VA 2OGGA 1G81A 2WV0A 4ZSBA 4ZSIA 1FW9A 2RA5A 3CNVA 2OOIA 3F8MA 3HFIA 2AHCA 1TT8A 4WWCA 3EETA 4U0WA 3F8LA 3LHEA 2IKKA 1G1BA 2PKHA 1JD3A 3DDVA 3EDPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BWG A;  2FA1 A;  4ZSK A;  2P19 A;  2NWI A;  3L5Z A;  1XLR A;  4U0V A;  2OGG A;  1G81 A;  2WV0 A;  4ZSB A;  4ZSI A;  1FW9 A;  2RA5 A;  3CNV A;  2OOI A;  3F8M A;  3HFI A;  2AHC A;  1TT8 A;  4WWC A;  3EET A;  4U0W A;  3F8L A;  3LHE A;  2IKK A;  1G1B A;  2PKH A;  1JD3 A;  3DDV A;  3EDP A; 
#chains in the Genus database with same CATH topology
 3BWG A;  2FA1 A;  4ZSK A;  2P19 A;  2NWI A;  3L5Z A;  1XLR A;  4U0V A;  2OGG A;  1G81 A;  2WV0 A;  4ZSB A;  4ZSI A;  1FW9 A;  2RA5 A;  3CNV A;  2OOI A;  3F8M A;  3HFI A;  2AHC A;  1TT8 A;  4WWC A;  3EET A;  4U0W A;  3F8L A;  3LHE A;  2IKK A;  1G1B A;  2PKH A;  1JD3 A;  3DDV A;  3EDP A; 
#chains in the Genus database with same CATH homology
 3BWG A;  2FA1 A;  4ZSK A;  2P19 A;  2NWI A;  3L5Z A;  1XLR A;  4U0V A;  2OGG A;  1G81 A;  2WV0 A;  4ZSB A;  4ZSI A;  1FW9 A;  2RA5 A;  3CNV A;  2OOI A;  3F8M A;  3HFI A;  2AHC A;  1TT8 A;  4WWC A;  3EET A;  4U0W A;  3F8L A;  3LHE A;  2IKK A;  1G1B A;  2PKH A;  1JD3 A;  3DDV A;  3EDP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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