2Q81A

Crystal structure of the miz-1 btb/poz domain
Total Genus 41
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
114
structure length
114
Chain Sequence
SDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDGVHFKAHKAVLAACSEYFKMLFVDQKDVVHLDISNAAGLGQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHALKSL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords Miz-1 protein
publication title A Beta-Sheet Interaction Interface Directs the Tetramerisation of the Miz-1 POZ Domain
pubmed doi rcsb
source organism Homo sapiens
total genus 41
structure length 114
sequence length 114
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2007-06-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00651 BTB BTB/POZ domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.710.10 Alpha Beta 2-Layer Sandwich Potassium Channel Kv1.1; Chain A Potassium Channel Kv1.1; Chain A 2q81A00
4CXTA 3OGKA 5A15A 5H7HA 1EXBE 2Q81A 4CRHA 1EODA 2OVRA 4WQOC 4W9LB 3LUTB 3HU6A 4W9EB 4AWJB 4BGCA 2R9RB 3M52A 3LBZA 1R29A 4W9DB 2E31B 1NN7A 1T1DA 3M5BA 5IBKA 1VCBB 1S1GA 3BIMA 4CP3A 1QDWA 1HV2A 4EOZA 2PPIA 2C9WC 1FS2B 1A68A 1P22B 1R2BA 5BXDA 4UYIA 2IZVC 3ZNGB 2A79B 3HQIA 4W9GB 3ZUNB 5DAFA 5H7GA 4AP2A 4W9HB 5HZGC 1FS1B 4U2MA 3V7DA 1LM8C 1DSXA 4AJYC 4J8ZA 4UIJA 2P1QA 3LNMB 2JZ3C 2ASSA 3GA1A 4JTCB 3L2OA 3DCGB 5DADA 1QDVA 5BXHA 3ZRCB 3ZTCB 3C6NA 2NN2A 1LQBB 3KVTA 2VPKA 2OVPA 4N9F5 4B9KB 3OHUA 2P1OA 2MA9C 1BUOA 3C6PA 3I3NA 3ZRFB 2NZ0B 5FTAA 2ASTA 5A6RA 2IF5A 4W9IB 4W9JB 1R28A 4CXIA 3E4UA 3HVEA 4U77A 4U2NA 3ZKJB 3C6OA 2P1NA 2OVQA 4W9FB 3HVEB 2Z8HA 3M8VA 2IHCA 4JTDB 2VKPA 1EOEA 3OGMA 1FQVB 2P1MA 4I6JC 4JTAB 5EUPA 4CXJA 3M4TA 4W9CB 3MKSA 1CS3A 3B84A 4W9HH 3DRZA 3WSOB 5LLIB 3OGLA 2E32B 4W9KB 1EOFA 3ZTDB 2P1PA 4HXIA 4BKTB 3FKCA 2YY9A 5BO4C 4B95B 4BKSB 4ZOUA 1LDKD 3OHVA 4APFA 5JH5B 3HTMA 4JGHC 2FNJC 4B9KE 5BXBA 1NEXA 2I2RA 5HYWB
chains in the Genus database with same CATH superfamily
4CXTA 3OGKA 5A15A 5H7HA 1EXBE 2Q81A 4CRHA 1EODA 2OVRA 4WQOC 4W9LB 3LUTB 3DRXA 3HU6A 4W9EB 4AWJB 4BGCA 2R9RB 3M52A 3LBZA 1R29A 4W9DB 2E31B 1NN7A 1T1DA 3M5BA 5IBKA 1VCBB 4YY8A 1S1GA 3BIMA 4CP3A 1QDWA 1HV2A 4EOZA 2PPIA 2C9WC 1FS2B 1A68A 1P22B 1R2BA 4ZGCA 5BXDA 4UYIA 2IZVC 3ZNGB 2A79B 3HQIA 4W9GB 3ZUNB 5DAFA 5H7GA 4AP2A 4W9HB 5HZGC 1FS1B 4U2MA 3V7DA 1LM8C 1DSXA 4AJYC 4J8ZA 4UIJA 2P1QA 3LNMB 2JZ3C 2ASSA 3GA1A 4JTCB 3L2OA 3DCGB 5DADA 1QDVA 5BXHA 3ZRCB 3ZTCB 3C6NA 2NN2A 1LQBB 3KVTA 2VPKA 2OVPA 4N9F5 4B9KB 3OHUA 2P1OA 2MA9C 1BUOA 3C6PA 3I3NA 3ZRFB 2NZ0B 5FTAA 2ASTA 5A6RA 2IF5A 4W9IB 4W9JB 1R28A 4CXIA 3E4UA 3HVEA 4U77A 4U2NA 3ZKJB 3C6OA 2P1NA 2OVQA 4W9FB 3HVEB 2Z8HA 3M8VA 2IHCA 4JTDB 2VKPA 1EOEA 3OGMA 1FQVB 2P1MA 4I6JC 4JTAB 5EUPA 4CXJA 3M4TA 4W9CB 3MKSA 1CS3A 3B84A 4W9HH 3DRZA 3WSOB 5LLIB 3OGLA 2E32B 4W9KB 1EOFA 3ZTDB 2P1PA 4HXIA 4BKTB 3FKCA 2YY9A 5BO4C 4B95B 4BKSB 4ZOUA 1LDKD 3OHVA 4APFA 3DRYA 3HTMA 4JGHC 5JH5B 2FNJC 4B9KE 5BXBA 1NEXA 2I2RA 5HYWB
chains in the Genus database with same CATH topology
4CXTA 3OGKA 5A15A 5H7HA 1EXBE 2Q81A 4CRHA 1EODA 2OVRA 4WQOC 4W9LB 3LUTB 3DRXA 3HU6A 4W9EB 4AWJB 4BGCA 2R9RB 3M52A 3LBZA 1R29A 4W9DB 2E31B 1NN7A 1T1DA 3M5BA 5IBKA 1VCBB 4YY8A 1S1GA 3BIMA 4CP3A 1QDWA 1HV2A 4EOZA 2PPIA 2C9WC 1FS2B 1A68A 1P22B 1R2BA 4ZGCA 5BXDA 4UYIA 2IZVC 3ZNGB 2A79B 3HQIA 4W9GB 3ZUNB 5DAFA 5H7GA 4AP2A 4W9HB 5HZGC 1FS1B 4U2MA 3V7DA 1LM8C 1DSXA 4AJYC 4J8ZA 4UIJA 2P1QA 3LNMB 2JZ3C 2ASSA 3GA1A 4JTCB 3L2OA 3DCGB 5DADA 1QDVA 5BXHA 3ZRCB 3ZTCB 3C6NA 2NN2A 1LQBB 3KVTA 2VPKA 2OVPA 4N9F5 4B9KB 3OHUA 2P1OA 2MA9C 1BUOA 3C6PA 3I3NA 3ZRFB 2NZ0B 5FTAA 2ASTA 5A6RA 2IF5A 4W9IB 4W9JB 1R28A 4CXIA 3E4UA 3HVEA 4U77A 4U2NA 3ZKJB 3C6OA 2P1NA 2OVQA 4W9FB 3HVEB 2Z8HA 3M8VA 2IHCA 4JTDB 2VKPA 1EOEA 3OGMA 1FQVB 2P1MA 4I6JC 4JTAB 5EUPA 4CXJA 3M4TA 4W9CB 3MKSA 1CS3A 3B84A 4W9HH 3DRZA 3WSOB 5LLIB 3OGLA 2E32B 4W9KB 1EOFA 3ZTDB 2P1PA 4HXIA 4BKTB 3FKCA 2YY9A 5BO4C 4B95B 4BKSB 4ZOUA 1LDKD 3OHVA 4APFA 3DRYA 3HTMA 4JGHC 5JH5B 2FNJC 4B9KE 5BXBA 1NEXA 2I2RA 5HYWB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CXT A;  3OGK A;  5A15 A;  5H7H A;  1EXB E;  2Q81 A;  4CRH A;  1EOD A;  2OVR A;  4WQO C;  4W9L B;  3LUT B;  3HU6 A;  4W9E B;  4AWJ B;  4BGC A;  2R9R B;  3M52 A;  3LBZ A;  1R29 A;  4W9D B;  2E31 B;  1NN7 A;  1T1D A;  3M5B A;  5IBK A;  1VCB B;  1S1G A;  3BIM A;  4CP3 A;  1QDW A;  1HV2 A;  4EOZ A;  2PPI A;  2C9W C;  1FS2 B;  1A68 A;  1P22 B;  1R2B A;  5BXD A;  4UYI A;  2IZV C;  3ZNG B;  2A79 B;  3HQI A;  4W9G B;  3ZUN B;  5DAF A;  5H7G A;  4AP2 A;  4W9H B;  5HZG C;  1FS1 B;  4U2M A;  3V7D A;  1LM8 C;  1DSX A;  4AJY C;  4J8Z A;  4UIJ A;  2P1Q A;  3LNM B;  2JZ3 C;  2ASS A;  3GA1 A;  4JTC B;  3L2O A;  3DCG B;  5DAD A;  1QDV A;  5BXH A;  3ZRC B;  3ZTC B;  3C6N A;  2NN2 A;  1LQB B;  3KVT A;  2VPK A;  2OVP A;  4N9F 5;  4B9K B;  3OHU A;  2P1O A;  2MA9 C;  1BUO A;  3C6P A;  3I3N A;  3ZRF B;  2NZ0 B;  5FTA A;  2AST A;  5A6R A;  2IF5 A;  4W9I B;  4W9J B;  1R28 A;  4CXI A;  3E4U A;  3HVE A;  4U77 A;  4U2N A;  3ZKJ B;  3C6O A;  2P1N A;  2OVQ A;  4W9F B;  3HVE B;  2Z8H A;  3M8V A;  2IHC A;  4JTD B;  2VKP A;  1EOE A;  3OGM A;  1FQV B;  2P1M A;  4I6J C;  4JTA B;  5EUP A;  4CXJ A;  3M4T A;  4W9C B;  3MKS A;  1CS3 A;  3B84 A;  4W9H H;  3DRZ A;  3WSO B;  5LLI B;  3OGL A;  2E32 B;  4W9K B;  1EOF A;  3ZTD B;  2P1P A;  4HXI A;  4BKT B;  3FKC A;  2YY9 A;  5BO4 C;  4B95 B;  4BKS B;  4ZOU A;  1LDK D;  3OHV A;  4APF A;  5JH5 B;  3HTM A;  4JGH C;  2FNJ C;  4B9K E;  5BXB A;  1NEX A;  2I2R A;  5HYW B; 
#chains in the Genus database with same CATH topology
 4CXT A;  3OGK A;  5A15 A;  5H7H A;  1EXB E;  2Q81 A;  4CRH A;  1EOD A;  2OVR A;  4WQO C;  4W9L B;  3LUT B;  3DRX A;  3HU6 A;  4W9E B;  4AWJ B;  4BGC A;  2R9R B;  3M52 A;  3LBZ A;  1R29 A;  4W9D B;  2E31 B;  1NN7 A;  1T1D A;  3M5B A;  5IBK A;  1VCB B;  4YY8 A;  1S1G A;  3BIM A;  4CP3 A;  1QDW A;  1HV2 A;  4EOZ A;  2PPI A;  2C9W C;  1FS2 B;  1A68 A;  1P22 B;  1R2B A;  4ZGC A;  5BXD A;  4UYI A;  2IZV C;  3ZNG B;  2A79 B;  3HQI A;  4W9G B;  3ZUN B;  5DAF A;  5H7G A;  4AP2 A;  4W9H B;  5HZG C;  1FS1 B;  4U2M A;  3V7D A;  1LM8 C;  1DSX A;  4AJY C;  4J8Z A;  4UIJ A;  2P1Q A;  3LNM B;  2JZ3 C;  2ASS A;  3GA1 A;  4JTC B;  3L2O A;  3DCG B;  5DAD A;  1QDV A;  5BXH A;  3ZRC B;  3ZTC B;  3C6N A;  2NN2 A;  1LQB B;  3KVT A;  2VPK A;  2OVP A;  4N9F 5;  4B9K B;  3OHU A;  2P1O A;  2MA9 C;  1BUO A;  3C6P A;  3I3N A;  3ZRF B;  2NZ0 B;  5FTA A;  2AST A;  5A6R A;  2IF5 A;  4W9I B;  4W9J B;  1R28 A;  4CXI A;  3E4U A;  3HVE A;  4U77 A;  4U2N A;  3ZKJ B;  3C6O A;  2P1N A;  2OVQ A;  4W9F B;  3HVE B;  2Z8H A;  3M8V A;  2IHC A;  4JTD B;  2VKP A;  1EOE A;  3OGM A;  1FQV B;  2P1M A;  4I6J C;  4JTA B;  5EUP A;  4CXJ A;  3M4T A;  4W9C B;  3MKS A;  1CS3 A;  3B84 A;  4W9H H;  3DRZ A;  3WSO B;  5LLI B;  3OGL A;  2E32 B;  4W9K B;  1EOF A;  3ZTD B;  2P1P A;  4HXI A;  4BKT B;  3FKC A;  2YY9 A;  5BO4 C;  4B95 B;  4BKS B;  4ZOU A;  1LDK D;  3OHV A;  4APF A;  3DRY A;  3HTM A;  4JGH C;  5JH5 B;  2FNJ C;  4B9K E;  5BXB A;  1NEX A;  2I2R A;  5HYW B; 
#chains in the Genus database with same CATH homology
 4CXT A;  3OGK A;  5A15 A;  5H7H A;  1EXB E;  2Q81 A;  4CRH A;  1EOD A;  2OVR A;  4WQO C;  4W9L B;  3LUT B;  3DRX A;  3HU6 A;  4W9E B;  4AWJ B;  4BGC A;  2R9R B;  3M52 A;  3LBZ A;  1R29 A;  4W9D B;  2E31 B;  1NN7 A;  1T1D A;  3M5B A;  5IBK A;  1VCB B;  4YY8 A;  1S1G A;  3BIM A;  4CP3 A;  1QDW A;  1HV2 A;  4EOZ A;  2PPI A;  2C9W C;  1FS2 B;  1A68 A;  1P22 B;  1R2B A;  4ZGC A;  5BXD A;  4UYI A;  2IZV C;  3ZNG B;  2A79 B;  3HQI A;  4W9G B;  3ZUN B;  5DAF A;  5H7G A;  4AP2 A;  4W9H B;  5HZG C;  1FS1 B;  4U2M A;  3V7D A;  1LM8 C;  1DSX A;  4AJY C;  4J8Z A;  4UIJ A;  2P1Q A;  3LNM B;  2JZ3 C;  2ASS A;  3GA1 A;  4JTC B;  3L2O A;  3DCG B;  5DAD A;  1QDV A;  5BXH A;  3ZRC B;  3ZTC B;  3C6N A;  2NN2 A;  1LQB B;  3KVT A;  2VPK A;  2OVP A;  4N9F 5;  4B9K B;  3OHU A;  2P1O A;  2MA9 C;  1BUO A;  3C6P A;  3I3N A;  3ZRF B;  2NZ0 B;  5FTA A;  2AST A;  5A6R A;  2IF5 A;  4W9I B;  4W9J B;  1R28 A;  4CXI A;  3E4U A;  3HVE A;  4U77 A;  4U2N A;  3ZKJ B;  3C6O A;  2P1N A;  2OVQ A;  4W9F B;  3HVE B;  2Z8H A;  3M8V A;  2IHC A;  4JTD B;  2VKP A;  1EOE A;  3OGM A;  1FQV B;  2P1M A;  4I6J C;  4JTA B;  5EUP A;  4CXJ A;  3M4T A;  4W9C B;  3MKS A;  1CS3 A;  3B84 A;  4W9H H;  3DRZ A;  3WSO B;  5LLI B;  3OGL A;  2E32 B;  4W9K B;  1EOF A;  3ZTD B;  2P1P A;  4HXI A;  4BKT B;  3FKC A;  2YY9 A;  5BO4 C;  4B95 B;  4BKS B;  4ZOU A;  1LDK D;  3OHV A;  4APF A;  3DRY A;  3HTM A;  4JGH C;  5JH5 B;  2FNJ C;  4B9K E;  5BXB A;  1NEX A;  2I2R A;  5HYW B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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