2QCKA

Crystal structure of flavin reductase domain protein (yp_831077.1) from arthrobacter sp. fb24 at 1.90 a resolution
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
159
structure length
159
Chain Sequence
FEGTFKEMFRRHAAGVAIITVNYNGTPYGFTATSVASLSAQPPRFTFNMARSSSSWPAIANTTHIGVHMLGLDNQELADRFARTKNRFEGDHWELGPYEVPILKDVAGWLIGKIQMRLSFENNAVVVVEVVEGQVGEDGTPLLYHSGAYSQPVPLDYEI
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Flavin reductase domain protein
publication title Crystal structure of flavin reductase domain protein (YP_831077.1) from Arthrobacter sp. FB24 at 1.90 A resolution
rcsb
source organism Arthrobacter sp.
total genus 30
structure length 159
sequence length 159
ec nomenclature
pdb deposition date 2007-06-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01613 Flavin_Reduct Flavin reductase like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.110.10 Mainly Beta Roll Pnp Oxidase; Chain A Electron Transport, Fmn-binding Protein; Chain A 2qckA01
3K87A 3E4VA 3A6QA 3ZOFA 3R5ZA 2HTDA 2HHZA 4L82A 2ARZA 4HMWA 1I0SA 3KYFA 3B5MA 2RDEA 1VL7A 2IG6A 2RE7A 4N7RC 1FLMA 2OL5A 5ESCA 4YBNA 2E83A 1XXOA 1G76A 1JNWA 3CP3A 4F07A 4IRAA 4ZKYA 4HMSA 2GJGA 1T9MA 1EJEA 2X1JA 1RZ1A 1I0RA 1CI0A 2VPAA 2I02A 4HMTA 3ZODA 3F7EA 1W9AA 1AXJA 3AMFA 2Q9KA 2HQ7A 3R5YA 4R82A 5JABA 4Z85A 2ED4A 4XHYA 3TGVA 3BNKA 2IMLA 3BA3A 3PFTA 2ECRA 1W3RA 3A20A 3KYGA 3SWJA 3R5PA 2D38A 2X1KA 1W3OA 3R5RA 3CB0A 1USFA 1G77A 1DNLA 4HMXA 3RH7A 3U5WA 3A6RA 3H96A 1NRGA 1WV4A 1W3PA 2R6VA 2ASFA 1YLNA 1TY9A 2AQ6A 2D5MA 5CHOA 4YWNA 1G78A 3BPKA 2HTIA 3EC6A 4HMUA 1Y30A 2QEAA 2QCKA 3HMZA 3FGEA 3ZOCA 3R5LA 3ZOGA 4HMVA 2PTFA 3AWHA 2NR4A 2FHQA 1RFEA 3GASA 2R0XA 5CHEC 1RZ0A 2FURA 3FKHA 3DMBA 1WLIA 2OU5A 1WLKA 3R5WA 3VY5A 1WGBA 1XHNA 3IN6A 3DB0A 3U0IA 2ECUA 3K88A 2D37A 3U34A 3U35A 1YOAA 4QVBA 4HX6A 3K86A 3HY8A 2D36A 1USCA 2IABA 3DNHA 2HQ9A 3ZOHA 3VYAA 4Y9IA 2FG9A 1G79A 2A2JA 3VY2A 4XJ2A 2I51A 3NFWA 1W3QA 3ZOEA 5BNCA
chains in the Genus database with same CATH superfamily
3K87A 3E4VA 3A6QA 3ZOFA 3R5ZA 2HTDA 2HHZA 4L82A 2ARZA 4HMWA 1I0SA 3KYFA 3B5MA 2L1TA 2RDEA 1VL7A 2IG6A 2RE7A 4N7RC 1FLMA 2OL5A 5ESCA 1Y12A 4YBNA 2E83A 1XXOA 1G76A 4UHVA 1JNWA 3CP3A 4F07A 4IRAA 4TV4A 4ZKYA 4HMSA 2GJGA 1T9MA 1EJEA 2X1JA 1RZ1A 1I0RA 1CI0A 2P5ZX 2VPAA 2I02A 4HMTA 3ZODA 3EAAA 4MTKA 3F7EA 1W9AA 2GUJA 4HKHA 1AXJA 3AMFA 2Q9KA 2HQ7A 3HE1A 3R5YA 4W64A 4R82A 2K4QA 5JABA 4Z85A 2ED4A 4XHYA 3TGVA 3BNKA 2IMLA 3BA3A 3PFTA 2ECRA 1W3RA 3A20A 3KYGA 3SWJA 3R5PA 2D38A 2X1KA 1W3OA 3R5RA 3CB0A 1USFA 1G77A 1DNLA 4HMXA 3RH7A 3U5WA 3A6RA 3H96A 1NRGA 1WV4A 1W3PA 2R6VA 2ASFA 1YLNA 1TY9A 2AQ6A 2D5MA 5CHOA 4YWNA 1G78A 3BPKA 2HTIA 3EC6A 4HMUA 1Y30A 2QEAA 2QCKA 3HMZA 3FGEA 3ZOCA 3R5LA 3ZOGA 4HMVA 2PTFA 3AWHA 2NR4A 2FHQA 1RFEA 3GASA 2R0XA 5CHEC 1RZ0A 2FURA 3FKHA 3DMBA 1WLIA 2OU5A 1WLKA 3R5WA 3VY5A 1WGBA 1XHNA 3IN6A 3V4HA 3DB0A 3U0IA 2ECUA 3K88A 2D37A 3U34A 3U35A 1YOAA 4QVBA 4HX6A 3K86A 3HY8A 2D36A 1USCA 2IABA 3DNHA 2HQ9A 3ZOHA 3VYAA 4Y9IA 2FG9A 1G79A 2A2JA 3VY2A 4XJ2A 2I51A 3NFWA 1W3QA 3ZOEA 5BNCA
chains in the Genus database with same CATH topology
3K87A 3E4VA 3A6QA 3ZOFA 3R5ZA 2HTDA 2HHZA 4L82A 2ARZA 4HMWA 1I0SA 3KYFA 3B5MA 2RDEA 1VL7A 2IG6A 2RE7A 4N7RC 1FLMA 2OL5A 5ESCA 4YBNA 2E83A 1XXOA 1G76A 1JNWA 3CP3A 4F07A 4IRAA 4ZKYA 4HMSA 2GJGA 1T9MA 1EJEA 2X1JA 1RZ1A 1I0RA 1CI0A 2VPAA 2I02A 4HMTA 3ZODA 3F7EA 1W9AA 1AXJA 3AMFA 2Q9KA 2HQ7A 3R5YA 4R82A 5JABA 4Z85A 2ED4A 4XHYA 3TGVA 3BNKA 2IMLA 3BA3A 3PFTA 2ECRA 1W3RA 3A20A 3KYGA 3SWJA 3R5PA 2D38A 2X1KA 1W3OA 3R5RA 3CB0A 1USFA 1G77A 1DNLA 4HMXA 3RH7A 3U5WA 3A6RA 3H96A 1NRGA 1WV4A 1W3PA 2R6VA 2ASFA 1YLNA 1TY9A 2AQ6A 2D5MA 5CHOA 4YWNA 1G78A 3BPKA 2HTIA 3EC6A 4HMUA 1Y30A 2QEAA 2QCKA 3HMZA 3FGEA 3ZOCA 3R5LA 3ZOGA 4HMVA 2PTFA 3AWHA 2NR4A 2FHQA 1RFEA 3GASA 2R0XA 5CHEC 1RZ0A 2FURA 3FKHA 3DMBA 1WLIA 2OU5A 1WLKA 3R5WA 3VY5A 1WGBA 1XHNA 3IN6A 3DB0A 3U0IA 2ECUA 3K88A 2D37A 3U34A 3U35A 1YOAA 4QVBA 4HX6A 3K86A 3HY8A 2D36A 1USCA 2IABA 3DNHA 2HQ9A 3ZOHA 3VYAA 4Y9IA 2FG9A 1G79A 2A2JA 3VY2A 4XJ2A 2I51A 3NFWA 1W3QA 3ZOEA 5BNCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K87 A;  3E4V A;  3A6Q A;  3ZOF A;  3R5Z A;  2HTD A;  2HHZ A;  4L82 A;  2ARZ A;  4HMW A;  1I0S A;  3KYF A;  3B5M A;  2RDE A;  1VL7 A;  2IG6 A;  2RE7 A;  4N7R C;  1FLM A;  2OL5 A;  5ESC A;  4YBN A;  2E83 A;  1XXO A;  1G76 A;  1JNW A;  3CP3 A;  4F07 A;  4IRA A;  4ZKY A;  4HMS A;  2GJG A;  1T9M A;  1EJE A;  2X1J A;  1RZ1 A;  1I0R A;  1CI0 A;  2VPA A;  2I02 A;  4HMT A;  3ZOD A;  3F7E A;  1W9A A;  1AXJ A;  3AMF A;  2Q9K A;  2HQ7 A;  3R5Y A;  4R82 A;  5JAB A;  4Z85 A;  2ED4 A;  4XHY A;  3TGV A;  3BNK A;  2IML A;  3BA3 A;  3PFT A;  2ECR A;  1W3R A;  3A20 A;  3KYG A;  3SWJ A;  3R5P A;  2D38 A;  2X1K A;  1W3O A;  3R5R A;  3CB0 A;  1USF A;  1G77 A;  1DNL A;  4HMX A;  3RH7 A;  3U5W A;  3A6R A;  3H96 A;  1NRG A;  1WV4 A;  1W3P A;  2R6V A;  2ASF A;  1YLN A;  1TY9 A;  2AQ6 A;  2D5M A;  5CHO A;  4YWN A;  1G78 A;  3BPK A;  2HTI A;  3EC6 A;  4HMU A;  1Y30 A;  2QEA A;  2QCK A;  3HMZ A;  3FGE A;  3ZOC A;  3R5L A;  3ZOG A;  4HMV A;  2PTF A;  3AWH A;  2NR4 A;  2FHQ A;  1RFE A;  3GAS A;  2R0X A;  5CHE C;  1RZ0 A;  2FUR A;  3FKH A;  3DMB A;  1WLI A;  2OU5 A;  1WLK A;  3R5W A;  3VY5 A;  1WGB A;  1XHN A;  3IN6 A;  3DB0 A;  3U0I A;  2ECU A;  3K88 A;  2D37 A;  3U34 A;  3U35 A;  1YOA A;  4QVB A;  4HX6 A;  3K86 A;  3HY8 A;  2D36 A;  1USC A;  2IAB A;  3DNH A;  2HQ9 A;  3ZOH A;  3VYA A;  4Y9I A;  2FG9 A;  1G79 A;  2A2J A;  3VY2 A;  4XJ2 A;  2I51 A;  3NFW A;  1W3Q A;  3ZOE A;  5BNC A; 
#chains in the Genus database with same CATH topology
 3K87 A;  3E4V A;  3A6Q A;  3ZOF A;  3R5Z A;  2HTD A;  2HHZ A;  4L82 A;  2ARZ A;  4HMW A;  1I0S A;  3KYF A;  3B5M A;  2L1T A;  2RDE A;  1VL7 A;  2IG6 A;  2RE7 A;  4N7R C;  1FLM A;  2OL5 A;  5ESC A;  1Y12 A;  4YBN A;  2E83 A;  1XXO A;  1G76 A;  4UHV A;  1JNW A;  3CP3 A;  4F07 A;  4IRA A;  4TV4 A;  4ZKY A;  4HMS A;  2GJG A;  1T9M A;  1EJE A;  2X1J A;  1RZ1 A;  1I0R A;  1CI0 A;  2P5Z X;  2VPA A;  2I02 A;  4HMT A;  3ZOD A;  3EAA A;  4MTK A;  3F7E A;  1W9A A;  2GUJ A;  4HKH A;  1AXJ A;  3AMF A;  2Q9K A;  2HQ7 A;  3HE1 A;  3R5Y A;  4W64 A;  4R82 A;  2K4Q A;  5JAB A;  4Z85 A;  2ED4 A;  4XHY A;  3TGV A;  3BNK A;  2IML A;  3BA3 A;  3PFT A;  2ECR A;  1W3R A;  3A20 A;  3KYG A;  3SWJ A;  3R5P A;  2D38 A;  2X1K A;  1W3O A;  3R5R A;  3CB0 A;  1USF A;  1G77 A;  1DNL A;  4HMX A;  3RH7 A;  3U5W A;  3A6R A;  3H96 A;  1NRG A;  1WV4 A;  1W3P A;  2R6V A;  2ASF A;  1YLN A;  1TY9 A;  2AQ6 A;  2D5M A;  5CHO A;  4YWN A;  1G78 A;  3BPK A;  2HTI A;  3EC6 A;  4HMU A;  1Y30 A;  2QEA A;  2QCK A;  3HMZ A;  3FGE A;  3ZOC A;  3R5L A;  3ZOG A;  4HMV A;  2PTF A;  3AWH A;  2NR4 A;  2FHQ A;  1RFE A;  3GAS A;  2R0X A;  5CHE C;  1RZ0 A;  2FUR A;  3FKH A;  3DMB A;  1WLI A;  2OU5 A;  1WLK A;  3R5W A;  3VY5 A;  1WGB A;  1XHN A;  3IN6 A;  3V4H A;  3DB0 A;  3U0I A;  2ECU A;  3K88 A;  2D37 A;  3U34 A;  3U35 A;  1YOA A;  4QVB A;  4HX6 A;  3K86 A;  3HY8 A;  2D36 A;  1USC A;  2IAB A;  3DNH A;  2HQ9 A;  3ZOH A;  3VYA A;  4Y9I A;  2FG9 A;  1G79 A;  2A2J A;  3VY2 A;  4XJ2 A;  2I51 A;  3NFW A;  1W3Q A;  3ZOE A;  5BNC A; 
#chains in the Genus database with same CATH homology
 3K87 A;  3E4V A;  3A6Q A;  3ZOF A;  3R5Z A;  2HTD A;  2HHZ A;  4L82 A;  2ARZ A;  4HMW A;  1I0S A;  3KYF A;  3B5M A;  2RDE A;  1VL7 A;  2IG6 A;  2RE7 A;  4N7R C;  1FLM A;  2OL5 A;  5ESC A;  4YBN A;  2E83 A;  1XXO A;  1G76 A;  1JNW A;  3CP3 A;  4F07 A;  4IRA A;  4ZKY A;  4HMS A;  2GJG A;  1T9M A;  1EJE A;  2X1J A;  1RZ1 A;  1I0R A;  1CI0 A;  2VPA A;  2I02 A;  4HMT A;  3ZOD A;  3F7E A;  1W9A A;  1AXJ A;  3AMF A;  2Q9K A;  2HQ7 A;  3R5Y A;  4R82 A;  5JAB A;  4Z85 A;  2ED4 A;  4XHY A;  3TGV A;  3BNK A;  2IML A;  3BA3 A;  3PFT A;  2ECR A;  1W3R A;  3A20 A;  3KYG A;  3SWJ A;  3R5P A;  2D38 A;  2X1K A;  1W3O A;  3R5R A;  3CB0 A;  1USF A;  1G77 A;  1DNL A;  4HMX A;  3RH7 A;  3U5W A;  3A6R A;  3H96 A;  1NRG A;  1WV4 A;  1W3P A;  2R6V A;  2ASF A;  1YLN A;  1TY9 A;  2AQ6 A;  2D5M A;  5CHO A;  4YWN A;  1G78 A;  3BPK A;  2HTI A;  3EC6 A;  4HMU A;  1Y30 A;  2QEA A;  2QCK A;  3HMZ A;  3FGE A;  3ZOC A;  3R5L A;  3ZOG A;  4HMV A;  2PTF A;  3AWH A;  2NR4 A;  2FHQ A;  1RFE A;  3GAS A;  2R0X A;  5CHE C;  1RZ0 A;  2FUR A;  3FKH A;  3DMB A;  1WLI A;  2OU5 A;  1WLK A;  3R5W A;  3VY5 A;  1WGB A;  1XHN A;  3IN6 A;  3DB0 A;  3U0I A;  2ECU A;  3K88 A;  2D37 A;  3U34 A;  3U35 A;  1YOA A;  4QVB A;  4HX6 A;  3K86 A;  3HY8 A;  2D36 A;  1USC A;  2IAB A;  3DNH A;  2HQ9 A;  3ZOH A;  3VYA A;  4Y9I A;  2FG9 A;  1G79 A;  2A2J A;  3VY2 A;  4XJ2 A;  2I51 A;  3NFW A;  1W3Q A;  3ZOE A;  5BNC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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