2QFTA

E.coli epsp synthase pro101ser liganded with s3p and glyphosate
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
427
structure length
427
Chain Sequence
MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRSLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title Structural basis of glyphosate tolerance resulting from mutations of Pro101 in Escherichia coli 5-enolpyruvylshikimate-3-phosphate synthase.
pubmed doi rcsb
source organism Escherichia coli
total genus 158
structure length 427
sequence length 427
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2007-06-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2qftA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2qftA01
3R38A 3ROIA 4E7FA 3KQJA 3FK1A 2YVWA 3V5VA 1X8RA 2GGDA 2GGAA 2O0BA 1EJDA 1X8TA 2QFQA 1G6SA 4N3PA 3ZH3A 1Q36A 4EIIA 4E7EA 1MI4A 1EJCA 2O15A 4ZNDA 1RF6A 3ISSA 1DLGA 3SPBA 3V4TA 4EGRA 2QFUA 2AA9A 3UPKA 3SU9A 1Q3GA 3RMTA 2PQDA 3SG1A 4GFPA 3TI2A 4R7UA 3SWIA 1UAEA 1NAWA 3ZH4A 1P88A 3SLHA 2AAYA 2QFSA 3KR6A 1RF5A 5BUFA 1A2NA 5BQ2A 3VCYA 3SWQA 1P89A 4E7DA 4E7GA 4E7CA 1YBGA 3FJXA 3SWAA 2RL1A 3SWEA 3SWDA 3SWGA 2Z2CA 1RYWA 2O0EA 2GG6A 4E7BA 1EYNA 3TR1A 5U4HA 2PQCA 1RF4A 2PQ9A 2BJBA 2QFTA 2RL2A 3FJZA 2O0DA 3KQAA 3NVSA 1G6TA 4FQDA 2PQBA 2O0ZA 3FK0A 5BS5A 3LTHA 2GG4A 2O0XA
chains in the Genus database with same CATH superfamily
3R38A 3ROIA 4E7FA 3KQJA 3FK1A 2YVWA 3V5VA 1X8RA 2GGDA 2GGAA 2O0BA 1EJDA 1X8TA 2QFQA 1G6SA 3PQVA 4N3PA 3ZH3A 1Q36A 4EIIA 4E7EA 1MI4A 1EJCA 2O15A 4ZNDA 1RF6A 3ISSA 1DLGA 4O89A 3SPBA 3V4TA 4EGRA 2QFUA 2AA9A 3UPKA 3SU9A 1Q3GA 3RMTA 2PQDA 3SG1A 4GFPA 3TI2A 4R7UA 3SWIA 1UAEA 1NAWA 3ZH4A 1P88A 3SLHA 2AAYA 2QFSA 3KGDA 3TW3A 3KR6A 4O8JA 1RF5A 5BUFA 1A2NA 5BQ2A 3VCYA 3SWQA 1P89A 4E7DA 4E7GA 4E7CA 1YBGA 3FJXA 3SWAA 2RL1A 3SWEA 3SWDA 3SWGA 3TV1A 2Z2CA 4CLQA 1RYWA 2O0EA 2GG6A 4E7BA 1EYNA 3TR1A 5U4HA 2PQCA 1RF4A 2PQ9A 2BJBA 2QFTA 2RL2A 3FJZA 3TUXA 2O0DA 3KQAA 1QMHA 1QMIA 3NVSA 1G6TA 4FQDA 2PQBA 2O0ZA 3FK0A 5BS5A 3LTHA 3TUTA 2GG4A 2O0XA
chains in the Genus database with same CATH topology
3R38A 3ROIA 4E7FA 3KQJA 3FK1A 2YVWA 3V5VA 1X8RA 2GGDA 2GGAA 2O0BA 1EJDA 1X8TA 2QFQA 1G6SA 4N3PA 3ZH3A 1Q36A 4EIIA 4E7EA 1MI4A 1EJCA 2O15A 4ZNDA 1RF6A 3ISSA 1DLGA 3SPBA 3V4TA 4EGRA 2QFUA 2AA9A 3UPKA 3SU9A 1Q3GA 3RMTA 2PQDA 3SG1A 4GFPA 3TI2A 4R7UA 3SWIA 1UAEA 1NAWA 3ZH4A 1P88A 3SLHA 2AAYA 2QFSA 3KR6A 1RF5A 5BUFA 1A2NA 5BQ2A 3VCYA 3SWQA 1P89A 4E7DA 4E7GA 4E7CA 1YBGA 3FJXA 3SWAA 2RL1A 3SWEA 3SWDA 3SWGA 2Z2CA 1RYWA 2O0EA 2GG6A 4E7BA 1EYNA 3TR1A 5U4HA 2PQCA 1RF4A 2PQ9A 2BJBA 2QFTA 2RL2A 3FJZA 2O0DA 3KQAA 3NVSA 1G6TA 4FQDA 2PQBA 2O0ZA 3FK0A 5BS5A 3LTHA 2GG4A 2O0XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3R38 A;  3ROI A;  4E7F A;  3KQJ A;  3FK1 A;  2YVW A;  3V5V A;  1X8R A;  2GGD A;  2GGA A;  2O0B A;  1EJD A;  1X8T A;  2QFQ A;  1G6S A;  4N3P A;  3ZH3 A;  1Q36 A;  4EII A;  4E7E A;  1MI4 A;  1EJC A;  2O15 A;  4ZND A;  1RF6 A;  3ISS A;  1DLG A;  3SPB A;  3V4T A;  4EGR A;  2QFU A;  2AA9 A;  3UPK A;  3SU9 A;  1Q3G A;  3RMT A;  2PQD A;  3SG1 A;  4GFP A;  3TI2 A;  4R7U A;  3SWI A;  1UAE A;  1NAW A;  3ZH4 A;  1P88 A;  3SLH A;  2AAY A;  2QFS A;  3KR6 A;  1RF5 A;  5BUF A;  1A2N A;  5BQ2 A;  3VCY A;  3SWQ A;  1P89 A;  4E7D A;  4E7G A;  4E7C A;  1YBG A;  3FJX A;  3SWA A;  2RL1 A;  3SWE A;  3SWD A;  3SWG A;  2Z2C A;  1RYW A;  2O0E A;  2GG6 A;  4E7B A;  1EYN A;  3TR1 A;  5U4H A;  2PQC A;  1RF4 A;  2PQ9 A;  2BJB A;  2QFT A;  2RL2 A;  3FJZ A;  2O0D A;  3KQA A;  3NVS A;  1G6T A;  4FQD A;  2PQB A;  2O0Z A;  3FK0 A;  5BS5 A;  3LTH A;  2GG4 A;  2O0X A; 
#chains in the Genus database with same CATH topology
 3R38 A;  3ROI A;  4E7F A;  3KQJ A;  3FK1 A;  2YVW A;  3V5V A;  1X8R A;  2GGD A;  2GGA A;  2O0B A;  1EJD A;  1X8T A;  2QFQ A;  1G6S A;  3PQV A;  4N3P A;  3ZH3 A;  1Q36 A;  4EII A;  4E7E A;  1MI4 A;  1EJC A;  2O15 A;  4ZND A;  1RF6 A;  3ISS A;  1DLG A;  4O89 A;  3SPB A;  3V4T A;  4EGR A;  2QFU A;  2AA9 A;  3UPK A;  3SU9 A;  1Q3G A;  3RMT A;  2PQD A;  3SG1 A;  4GFP A;  3TI2 A;  4R7U A;  3SWI A;  1UAE A;  1NAW A;  3ZH4 A;  1P88 A;  3SLH A;  2AAY A;  2QFS A;  3KGD A;  3TW3 A;  3KR6 A;  4O8J A;  1RF5 A;  5BUF A;  1A2N A;  5BQ2 A;  3VCY A;  3SWQ A;  1P89 A;  4E7D A;  4E7G A;  4E7C A;  1YBG A;  3FJX A;  3SWA A;  2RL1 A;  3SWE A;  3SWD A;  3SWG A;  3TV1 A;  2Z2C A;  4CLQ A;  1RYW A;  2O0E A;  2GG6 A;  4E7B A;  1EYN A;  3TR1 A;  5U4H A;  2PQC A;  1RF4 A;  2PQ9 A;  2BJB A;  2QFT A;  2RL2 A;  3FJZ A;  3TUX A;  2O0D A;  3KQA A;  1QMH A;  1QMI A;  3NVS A;  1G6T A;  4FQD A;  2PQB A;  2O0Z A;  3FK0 A;  5BS5 A;  3LTH A;  3TUT A;  2GG4 A;  2O0X A; 
#chains in the Genus database with same CATH homology
 3R38 A;  3ROI A;  4E7F A;  3KQJ A;  3FK1 A;  2YVW A;  3V5V A;  1X8R A;  2GGD A;  2GGA A;  2O0B A;  1EJD A;  1X8T A;  2QFQ A;  1G6S A;  4N3P A;  3ZH3 A;  1Q36 A;  4EII A;  4E7E A;  1MI4 A;  1EJC A;  2O15 A;  4ZND A;  1RF6 A;  3ISS A;  1DLG A;  3SPB A;  3V4T A;  4EGR A;  2QFU A;  2AA9 A;  3UPK A;  3SU9 A;  1Q3G A;  3RMT A;  2PQD A;  3SG1 A;  4GFP A;  3TI2 A;  4R7U A;  3SWI A;  1UAE A;  1NAW A;  3ZH4 A;  1P88 A;  3SLH A;  2AAY A;  2QFS A;  3KR6 A;  1RF5 A;  5BUF A;  1A2N A;  5BQ2 A;  3VCY A;  3SWQ A;  1P89 A;  4E7D A;  4E7G A;  4E7C A;  1YBG A;  3FJX A;  3SWA A;  2RL1 A;  3SWE A;  3SWD A;  3SWG A;  2Z2C A;  1RYW A;  2O0E A;  2GG6 A;  4E7B A;  1EYN A;  3TR1 A;  5U4H A;  2PQC A;  1RF4 A;  2PQ9 A;  2BJB A;  2QFT A;  2RL2 A;  3FJZ A;  2O0D A;  3KQA A;  3NVS A;  1G6T A;  4FQD A;  2PQB A;  2O0Z A;  3FK0 A;  5BS5 A;  3LTH A;  2GG4 A;  2O0X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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