2QFUA

E.coli epsp synthase pro101leu liganded with s3p and glyphosate
Total Genus 161
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
161
sequence length
427
structure length
427
Chain Sequence
MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRLLAAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 3-phosphoshikimate 1-carboxyvinyltransferase
publication title Structural basis of glyphosate tolerance resulting from mutations of Pro101 in Escherichia coli 5-enolpyruvylshikimate-3-phosphate synthase.
pubmed doi rcsb
source organism Escherichia coli
total genus 161
structure length 427
sequence length 427
ec nomenclature ec 2.5.1.19: 3-phosphoshikimate 1-carboxyvinyltransferase.
pdb deposition date 2007-06-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00275 EPSP_synthase EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2qfuA02
3.65.10.10 Alpha Beta Alpha-beta prism UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain Enolpyruvate transferase domain 2qfuA01
2GG6A 3SWDA 2O0ZA 4ZNDA 2PQBA 4FQDA 5BQ2A 1EYNA 4R7UA 3SG1A 1DLGA 3FJZA 3VCYA 1RYWA 1X8TA 3ZH3A 3UPKA 4N3PA 4E7EA 4EGRA 3R38A 1YBGA 2GG4A 1EJCA 3SWQA 4E7DA 5BUFA 2O0DA 3TI2A 4E7CA 3SWAA 2QFQA 3RMTA 3FJXA 3V5VA 4EIIA 1NAWA 1Q36A 2AA9A 1RF6A 2PQDA 3SU9A 1A2NA 2YVWA 3SWEA 3KR6A 2O0EA 1G6TA 1RF4A 3V4TA 2O15A 4E7GA 3KQJA 3LTHA 1RF5A 3SWIA 1MI4A 1P89A 3SPBA 2QFUA 3SWGA 2AAYA 1Q3GA 1X8RA 3NVSA 2BJBA 3SLHA 3FK0A 2RL1A 2O0XA 1P88A 2GGAA 1UAEA 4E7BA 2PQ9A 3KQAA 3ZH4A 2RL2A 2O0BA 2Z2CA 2QFSA 3ROIA 2QFTA 5U4HA 3ISSA 3FK1A 2PQCA 1G6SA 1EJDA 4E7FA 2GGDA 3TR1A 4GFPA 5BS5A
chains in the Genus database with same CATH superfamily
4O89A 2GG6A 3SWDA 2O0ZA 4ZNDA 2PQBA 4FQDA 5BQ2A 1EYNA 4R7UA 3SG1A 1DLGA 3FJZA 4O8JA 3VCYA 1RYWA 1X8TA 3ZH3A 3UPKA 1QMHA 4N3PA 4E7EA 4EGRA 3R38A 1YBGA 2GG4A 3PQVA 3TW3A 1EJCA 3SWQA 4E7DA 5BUFA 2O0DA 3TV1A 3TI2A 4E7CA 3SWAA 2QFQA 3RMTA 3FJXA 3V5VA 4EIIA 1NAWA 4CLQA 1Q36A 2AA9A 1RF6A 1QMIA 2PQDA 3SU9A 1A2NA 2YVWA 3SWEA 3KR6A 2O0EA 3TUXA 1G6TA 1RF4A 3V4TA 3TUTA 2O15A 4E7GA 3KQJA 3LTHA 1RF5A 3SWIA 1MI4A 1P89A 3SPBA 2QFUA 3SWGA 2AAYA 1Q3GA 1X8RA 3KGDA 3NVSA 2BJBA 3SLHA 3FK0A 2RL1A 2O0XA 1P88A 2GGAA 1UAEA 4E7BA 2PQ9A 3KQAA 3ZH4A 2RL2A 2O0BA 2Z2CA 2QFSA 3ROIA 2QFTA 5U4HA 3ISSA 3FK1A 2PQCA 1G6SA 1EJDA 4E7FA 2GGDA 3TR1A 4GFPA 5BS5A
chains in the Genus database with same CATH topology
2GG6A 3SWDA 2O0ZA 4ZNDA 2PQBA 4FQDA 5BQ2A 1EYNA 4R7UA 3SG1A 1DLGA 3FJZA 3VCYA 1RYWA 1X8TA 3ZH3A 3UPKA 4N3PA 4E7EA 4EGRA 3R38A 1YBGA 2GG4A 1EJCA 3SWQA 4E7DA 5BUFA 2O0DA 3TI2A 4E7CA 3SWAA 2QFQA 3RMTA 3FJXA 3V5VA 4EIIA 1NAWA 1Q36A 2AA9A 1RF6A 2PQDA 3SU9A 1A2NA 2YVWA 3SWEA 3KR6A 2O0EA 1G6TA 1RF4A 3V4TA 2O15A 4E7GA 3KQJA 3LTHA 1RF5A 3SWIA 1MI4A 1P89A 3SPBA 2QFUA 3SWGA 2AAYA 1Q3GA 1X8RA 3NVSA 2BJBA 3SLHA 3FK0A 2RL1A 2O0XA 1P88A 2GGAA 1UAEA 4E7BA 2PQ9A 3KQAA 3ZH4A 2RL2A 2O0BA 2Z2CA 2QFSA 3ROIA 2QFTA 5U4HA 3ISSA 3FK1A 2PQCA 1G6SA 1EJDA 4E7FA 2GGDA 3TR1A 4GFPA 5BS5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GG6 A;  3SWD A;  2O0Z A;  4ZND A;  2PQB A;  4FQD A;  5BQ2 A;  1EYN A;  4R7U A;  3SG1 A;  1DLG A;  3FJZ A;  3VCY A;  1RYW A;  1X8T A;  3ZH3 A;  3UPK A;  4N3P A;  4E7E A;  4EGR A;  3R38 A;  1YBG A;  2GG4 A;  1EJC A;  3SWQ A;  4E7D A;  5BUF A;  2O0D A;  3TI2 A;  4E7C A;  3SWA A;  2QFQ A;  3RMT A;  3FJX A;  3V5V A;  4EII A;  1NAW A;  1Q36 A;  2AA9 A;  1RF6 A;  2PQD A;  3SU9 A;  1A2N A;  2YVW A;  3SWE A;  3KR6 A;  2O0E A;  1G6T A;  1RF4 A;  3V4T A;  2O15 A;  4E7G A;  3KQJ A;  3LTH A;  1RF5 A;  3SWI A;  1MI4 A;  1P89 A;  3SPB A;  2QFU A;  3SWG A;  2AAY A;  1Q3G A;  1X8R A;  3NVS A;  2BJB A;  3SLH A;  3FK0 A;  2RL1 A;  2O0X A;  1P88 A;  2GGA A;  1UAE A;  4E7B A;  2PQ9 A;  3KQA A;  3ZH4 A;  2RL2 A;  2O0B A;  2Z2C A;  2QFS A;  3ROI A;  2QFT A;  5U4H A;  3ISS A;  3FK1 A;  2PQC A;  1G6S A;  1EJD A;  4E7F A;  2GGD A;  3TR1 A;  4GFP A;  5BS5 A; 
#chains in the Genus database with same CATH topology
 4O89 A;  2GG6 A;  3SWD A;  2O0Z A;  4ZND A;  2PQB A;  4FQD A;  5BQ2 A;  1EYN A;  4R7U A;  3SG1 A;  1DLG A;  3FJZ A;  4O8J A;  3VCY A;  1RYW A;  1X8T A;  3ZH3 A;  3UPK A;  1QMH A;  4N3P A;  4E7E A;  4EGR A;  3R38 A;  1YBG A;  2GG4 A;  3PQV A;  3TW3 A;  1EJC A;  3SWQ A;  4E7D A;  5BUF A;  2O0D A;  3TV1 A;  3TI2 A;  4E7C A;  3SWA A;  2QFQ A;  3RMT A;  3FJX A;  3V5V A;  4EII A;  1NAW A;  4CLQ A;  1Q36 A;  2AA9 A;  1RF6 A;  1QMI A;  2PQD A;  3SU9 A;  1A2N A;  2YVW A;  3SWE A;  3KR6 A;  2O0E A;  3TUX A;  1G6T A;  1RF4 A;  3V4T A;  3TUT A;  2O15 A;  4E7G A;  3KQJ A;  3LTH A;  1RF5 A;  3SWI A;  1MI4 A;  1P89 A;  3SPB A;  2QFU A;  3SWG A;  2AAY A;  1Q3G A;  1X8R A;  3KGD A;  3NVS A;  2BJB A;  3SLH A;  3FK0 A;  2RL1 A;  2O0X A;  1P88 A;  2GGA A;  1UAE A;  4E7B A;  2PQ9 A;  3KQA A;  3ZH4 A;  2RL2 A;  2O0B A;  2Z2C A;  2QFS A;  3ROI A;  2QFT A;  5U4H A;  3ISS A;  3FK1 A;  2PQC A;  1G6S A;  1EJD A;  4E7F A;  2GGD A;  3TR1 A;  4GFP A;  5BS5 A; 
#chains in the Genus database with same CATH homology
 2GG6 A;  3SWD A;  2O0Z A;  4ZND A;  2PQB A;  4FQD A;  5BQ2 A;  1EYN A;  4R7U A;  3SG1 A;  1DLG A;  3FJZ A;  3VCY A;  1RYW A;  1X8T A;  3ZH3 A;  3UPK A;  4N3P A;  4E7E A;  4EGR A;  3R38 A;  1YBG A;  2GG4 A;  1EJC A;  3SWQ A;  4E7D A;  5BUF A;  2O0D A;  3TI2 A;  4E7C A;  3SWA A;  2QFQ A;  3RMT A;  3FJX A;  3V5V A;  4EII A;  1NAW A;  1Q36 A;  2AA9 A;  1RF6 A;  2PQD A;  3SU9 A;  1A2N A;  2YVW A;  3SWE A;  3KR6 A;  2O0E A;  1G6T A;  1RF4 A;  3V4T A;  2O15 A;  4E7G A;  3KQJ A;  3LTH A;  1RF5 A;  3SWI A;  1MI4 A;  1P89 A;  3SPB A;  2QFU A;  3SWG A;  2AAY A;  1Q3G A;  1X8R A;  3NVS A;  2BJB A;  3SLH A;  3FK0 A;  2RL1 A;  2O0X A;  1P88 A;  2GGA A;  1UAE A;  4E7B A;  2PQ9 A;  3KQA A;  3ZH4 A;  2RL2 A;  2O0B A;  2Z2C A;  2QFS A;  3ROI A;  2QFT A;  5U4H A;  3ISS A;  3FK1 A;  2PQC A;  1G6S A;  1EJD A;  4E7F A;  2GGD A;  3TR1 A;  4GFP A;  5BS5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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