2QPMA

Leu492ala mutant of maize cytokinin oxidase/dehydrogenase complexed with benzylurea inhibitor cpbu
Total Genus 171
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
171
sequence length
502
structure length
496
Chain Sequence
PWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTADLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRLVYTDFAAFSADQERLTAPRSFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYAARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Cytokinin dehydrogenase 1
publication title Phenyl- and benzylurea cytokinins as competitive inhibitors of cytokinin oxidase/dehydrogenase: a structural study.
pubmed doi rcsb
source organism Zea mays
molecule tags Oxidoreductase
total genus 171
structure length 496
sequence length 502
ec nomenclature ec 1.5.99.12: Cytokinin dehydrogenase.
pdb deposition date 2007-07-24

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01565 FAD_binding_4 FAD binding domain
A PF09265 Cytokin-bind Cytokinin dehydrogenase 1, FAD and cytokinin binding
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.43.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 2qpmA01
3.30.465.10 Alpha Beta 2-Layer Sandwich Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 2qpmA02
3.40.462.10 Alpha Beta 3-Layer(aba) Sandwich Vanillyl-alcohol Oxidase; Chain A, domain 3 FAD-linked oxidases, C-terminal domain 2qpmA03
2QKNA 3S1DA 2I0KA 2P13A 3GSYA 3B9JB 1FFVC 4PVHA 3FW9A 3BW7A 1UXYA 1VAOA 1I19A 3ETRB 1E0YA 2BVHA 3D2DA 5G5HB 3LAEA 3S1EA 2W3RA 4BC7A 5HQXA 1W1JA 3AMZA 1W1QA 1N62C 2BVFA 3DQ0A 2RK5A 5FXDA 2W55A 1JRPA 5AE3A 1VDVA 3D2HA 1W1OA 3TSHA 1HSKA 1E8GA 2P3HA 1AHZA 2GQUA 1JROA 1N5WC 3NVZB 5FXPA 1QLUA 4HG0A 3EUB3 1ZR6A 2VFTA 4PVJA 3NS1B 2R2ZA 1MBBA 1WVFA 4XLOA 1FFUC 4JB1A 2Q4WA 3JS8A 4OALA 2VFUA 3D2JA 2NQWA 3PM9A 5G5GB 4PVEA 4BBYA 5FXFA 4EC3A 2PLSA 2VAOA 1E8FA 3VTEA 1AHUA 5HMRA 4PVKA 4BC9A 5AE2A 3DEDA 3W8WA 1FO4A 3NVVB 4PWBA 3FW8A 5FXEA 2OAIA 2P4PA 3S1FA 5AE1A 3TSJA 4PZFA 1MBTA 3SR6B 1W1MA 3W8ZA 1W1LA 1DIIA 1WVEA 3AM9A 1N60C 1V97A 1FIQB 2E3TA 3FW7A 2PLIA 3HRDC 1QLTA 2W54A 3C0PA 1E8HA 4UD8A 2YVSA 2VFVA 4ZOHB 3FWAA 1N5XA 1W1RA 2VFRA 4PYTA 3S1CA 1RM6B 3NVWB 2R8DA 1DZNA 3NRZB 1N61C 1ZXIC 2AXRA 1SB3B 3KJMA 2VFSA 1W1KA 2W3SA 3I99A 4O95A 2QPMA 1F0XA 4JAYA 1N63C 3NVYB 2Q85A 2EXRA 2O3GA 3TX1A 4BCAA 3W8XA 5ADZA 2GQTA 4DNSA 4ML8A 5D79A 5HHZA 1T3QC 2BVGA 2MBRA 3LLBA 4PWCA 1WYGA 3AN1A 4MLAA 1W1SA 1AHVA 1DIQA
chains in the Genus database with same CATH superfamily
2QKNA 3S1DA 2I0KA 2P13A 3GSYA 3B9JB 2Y3SA 1FFVC 4PVHA 3FW9A 3BW7A 2UUUA 1UXYA 1VAOA 1I19A 3ETRB 1E0YA 2BVHA 3D2DA 3EJEB 5G5HB 3LAEA 3S1EA 2W3RA 4BC7A 5HQXA 1W1JA 3AMZA 1W1QA 1N62C 2BVFA 3DQ0A 2RK5A 5FXDA 2W55A 1JRPA 2IPIA 5AE3A 3EJBB 1VDVA 3D2HA 5I1WA 1W1OA 3TSHA 5L6GA 1HSKA 1E8GA 2P3HA 1AHZA 2GQUA 1JROA 1N5WC 3NVZB 5FXPA 1QLUA 3EJDB 4HG0A 3EUB3 1ZR6A 2VFTA 4PVJA 3NS1B 2R2ZA 1MBBA 1WVFA 5I1VA 4XLOA 3RJAA 1FFUC 4JB1A 2Q4WA 3JS8A 4OALA 2VFUA 3D2JA 2NQWA 3PM9A 5G5GB 4PVEA 4BBYA 5FXFA 4EC3A 2PLSA 2VAOA 1E8FA 3VTEA 1AHUA 5HMRA 4PVKA 4BC9A 5AE2A 3DEDA 3W8WA 1FO4A 3POPA 3NVVB 4PWBA 3RJ8A 3FW8A 2Y4GA 5FXEA 2OAIA 2P4PA 3S1FA 5AE1A 5AWVA 3TSJA 2WDWA 4PZFA 1MBTA 3SR6B 2UUVA 1W1MA 3W8ZA 1W1LA 1DIIA 1WVEA 3AM9A 1N60C 1V97A 1FIQB 2E3TA 3FW7A 2PLIA 3HRDC 1QLTA 2W54A 3C0PA 1E8HA 4UD8A 2YVSA 2VFVA 4ZOHB 3FWAA 1N5XA 1W1RA 2VFRA 4PYTA 3S1CA 1RM6B 3NVWB 2R8DA 1DZNA 3NRZB 2Y3RA 3PQBA 1N61C 5K8EA 1ZXIC 2Y08A 2AXRA 1SB3B 3KJMA 2VFSA 1W1KA 2W3SA 3I99A 4O95A 2QPMA 1F0XA 4JAYA 1N63C 3NVYB 2Q85A 2EXRA 2O3GA 3TX1A 4BCAA 3W8XA 5ADZA 2GQTA 4DNSA 4ML8A 5D79A 5HHZA 1T3QC 2BVGA 2MBRA 3LLBA 4PWCA 1WYGA 5L6FA 3AN1A 4MLAA 1W1SA 1AHVA 1DIQA 3HSUA
chains in the Genus database with same CATH topology
2QKNA 3S1DA 2I0KA 2P13A 3GSYA 3B9JB 2Y3SA 1FFVC 4PVHA 3FW9A 3BW7A 2UUUA 1UXYA 1VAOA 1I19A 3ETRB 1E0YA 2BVHA 3D2DA 5G5HB 3LAEA 3S1EA 2W3RA 4BC7A 5HQXA 1W1JA 3AMZA 1W1QA 1N62C 2BVFA 3DQ0A 2RK5A 5FXDA 2W55A 1JRPA 2IPIA 5AE3A 1VDVA 3D2HA 5I1WA 1W1OA 3TSHA 5L6GA 1HSKA 1E8GA 2P3HA 1AHZA 2GQUA 1JROA 1N5WC 3NVZB 5FXPA 1QLUA 4HG0A 3EUB3 1ZR6A 2VFTA 4PVJA 3NS1B 2R2ZA 1MBBA 1WVFA 5I1VA 4XLOA 3RJAA 1FFUC 4JB1A 2Q4WA 3JS8A 4OALA 2VFUA 3D2JA 2NQWA 3PM9A 5G5GB 4PVEA 4BBYA 5FXFA 4EC3A 2PLSA 2VAOA 1E8FA 3VTEA 1AHUA 5HMRA 4PVKA 4BC9A 5AE2A 3DEDA 3W8WA 1FO4A 3POPA 3NVVB 4PWBA 3RJ8A 3FW8A 2Y4GA 5FXEA 2OAIA 2P4PA 3S1FA 5AE1A 5AWVA 3TSJA 2WDWA 4PZFA 1MBTA 3SR6B 2UUVA 1W1MA 3W8ZA 1W1LA 1DIIA 1WVEA 3AM9A 1N60C 1V97A 1FIQB 2E3TA 3FW7A 2PLIA 3HRDC 1QLTA 2W54A 3C0PA 1E8HA 4UD8A 2YVSA 2VFVA 4ZOHB 3FWAA 1N5XA 1W1RA 2VFRA 4PYTA 3S1CA 1RM6B 3NVWB 2R8DA 1DZNA 3NRZB 2Y3RA 3PQBA 1N61C 5K8EA 1ZXIC 2Y08A 2AXRA 1SB3B 3KJMA 2VFSA 1W1KA 2W3SA 3I99A 4O95A 2QPMA 1F0XA 4JAYA 1N63C 3NVYB 2Q85A 2EXRA 2O3GA 3TX1A 4BCAA 3W8XA 5ADZA 2GQTA 4DNSA 4ML8A 5D79A 5HHZA 1T3QC 2BVGA 2MBRA 3LLBA 4PWCA 1WYGA 5L6FA 3AN1A 4MLAA 1W1SA 1AHVA 1DIQA 3HSUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QKN A;  3S1D A;  2I0K A;  2P13 A;  3GSY A;  3B9J B;  1FFV C;  4PVH A;  3FW9 A;  3BW7 A;  1UXY A;  1VAO A;  1I19 A;  3ETR B;  1E0Y A;  2BVH A;  3D2D A;  5G5H B;  3LAE A;  3S1E A;  2W3R A;  4BC7 A;  5HQX A;  1W1J A;  3AMZ A;  1W1Q A;  1N62 C;  2BVF A;  3DQ0 A;  2RK5 A;  5FXD A;  2W55 A;  1JRP A;  5AE3 A;  1VDV A;  3D2H A;  1W1O A;  3TSH A;  1HSK A;  1E8G A;  2P3H A;  1AHZ A;  2GQU A;  1JRO A;  1N5W C;  3NVZ B;  5FXP A;  1QLU A;  4HG0 A;  3EUB 3;  1ZR6 A;  2VFT A;  4PVJ A;  3NS1 B;  2R2Z A;  1MBB A;  1WVF A;  4XLO A;  1FFU C;  4JB1 A;  2Q4W A;  3JS8 A;  4OAL A;  2VFU A;  3D2J A;  2NQW A;  3PM9 A;  5G5G B;  4PVE A;  4BBY A;  5FXF A;  4EC3 A;  2PLS A;  2VAO A;  1E8F A;  3VTE A;  1AHU A;  5HMR A;  4PVK A;  4BC9 A;  5AE2 A;  3DED A;  3W8W A;  1FO4 A;  3NVV B;  4PWB A;  3FW8 A;  5FXE A;  2OAI A;  2P4P A;  3S1F A;  5AE1 A;  3TSJ A;  4PZF A;  1MBT A;  3SR6 B;  1W1M A;  3W8Z A;  1W1L A;  1DII A;  1WVE A;  3AM9 A;  1N60 C;  1V97 A;  1FIQ B;  2E3T A;  3FW7 A;  2PLI A;  3HRD C;  1QLT A;  2W54 A;  3C0P A;  1E8H A;  4UD8 A;  2YVS A;  2VFV A;  4ZOH B;  3FWA A;  1N5X A;  1W1R A;  2VFR A;  4PYT A;  3S1C A;  1RM6 B;  3NVW B;  2R8D A;  1DZN A;  3NRZ B;  1N61 C;  1ZXI C;  2AXR A;  1SB3 B;  3KJM A;  2VFS A;  1W1K A;  2W3S A;  3I99 A;  4O95 A;  2QPM A;  1F0X A;  4JAY A;  1N63 C;  3NVY B;  2Q85 A;  2EXR A;  2O3G A;  3TX1 A;  4BCA A;  3W8X A;  5ADZ A;  2GQT A;  4DNS A;  4ML8 A;  5D79 A;  5HHZ A;  1T3Q C;  2BVG A;  2MBR A;  3LLB A;  4PWC A;  1WYG A;  3AN1 A;  4MLA A;  1W1S A;  1AHV A;  1DIQ A; 
#chains in the Genus database with same CATH topology
 2QKN A;  3S1D A;  2I0K A;  2P13 A;  3GSY A;  3B9J B;  2Y3S A;  1FFV C;  4PVH A;  3FW9 A;  3BW7 A;  2UUU A;  1UXY A;  1VAO A;  1I19 A;  3ETR B;  1E0Y A;  2BVH A;  3D2D A;  3EJE B;  5G5H B;  3LAE A;  3S1E A;  2W3R A;  4BC7 A;  5HQX A;  1W1J A;  3AMZ A;  1W1Q A;  1N62 C;  2BVF A;  3DQ0 A;  2RK5 A;  5FXD A;  2W55 A;  1JRP A;  2IPI A;  5AE3 A;  3EJB B;  1VDV A;  3D2H A;  5I1W A;  1W1O A;  3TSH A;  5L6G A;  1HSK A;  1E8G A;  2P3H A;  1AHZ A;  2GQU A;  1JRO A;  1N5W C;  3NVZ B;  5FXP A;  1QLU A;  3EJD B;  4HG0 A;  3EUB 3;  1ZR6 A;  2VFT A;  4PVJ A;  3NS1 B;  2R2Z A;  1MBB A;  1WVF A;  5I1V A;  4XLO A;  3RJA A;  1FFU C;  4JB1 A;  2Q4W A;  3JS8 A;  4OAL A;  2VFU A;  3D2J A;  2NQW A;  3PM9 A;  5G5G B;  4PVE A;  4BBY A;  5FXF A;  4EC3 A;  2PLS A;  2VAO A;  1E8F A;  3VTE A;  1AHU A;  5HMR A;  4PVK A;  4BC9 A;  5AE2 A;  3DED A;  3W8W A;  1FO4 A;  3POP A;  3NVV B;  4PWB A;  3RJ8 A;  3FW8 A;  2Y4G A;  5FXE A;  2OAI A;  2P4P A;  3S1F A;  5AE1 A;  5AWV A;  3TSJ A;  2WDW A;  4PZF A;  1MBT A;  3SR6 B;  2UUV A;  1W1M A;  3W8Z A;  1W1L A;  1DII A;  1WVE A;  3AM9 A;  1N60 C;  1V97 A;  1FIQ B;  2E3T A;  3FW7 A;  2PLI A;  3HRD C;  1QLT A;  2W54 A;  3C0P A;  1E8H A;  4UD8 A;  2YVS A;  2VFV A;  4ZOH B;  3FWA A;  1N5X A;  1W1R A;  2VFR A;  4PYT A;  3S1C A;  1RM6 B;  3NVW B;  2R8D A;  1DZN A;  3NRZ B;  2Y3R A;  3PQB A;  1N61 C;  5K8E A;  1ZXI C;  2Y08 A;  2AXR A;  1SB3 B;  3KJM A;  2VFS A;  1W1K A;  2W3S A;  3I99 A;  4O95 A;  2QPM A;  1F0X A;  4JAY A;  1N63 C;  3NVY B;  2Q85 A;  2EXR A;  2O3G A;  3TX1 A;  4BCA A;  3W8X A;  5ADZ A;  2GQT A;  4DNS A;  4ML8 A;  5D79 A;  5HHZ A;  1T3Q C;  2BVG A;  2MBR A;  3LLB A;  4PWC A;  1WYG A;  5L6F A;  3AN1 A;  4MLA A;  1W1S A;  1AHV A;  1DIQ A;  3HSU A; 
#chains in the Genus database with same CATH homology
 2QKN A;  3S1D A;  2I0K A;  2P13 A;  3GSY A;  3B9J B;  2Y3S A;  1FFV C;  4PVH A;  3FW9 A;  3BW7 A;  2UUU A;  1UXY A;  1VAO A;  1I19 A;  3ETR B;  1E0Y A;  2BVH A;  3D2D A;  5G5H B;  3LAE A;  3S1E A;  2W3R A;  4BC7 A;  5HQX A;  1W1J A;  3AMZ A;  1W1Q A;  1N62 C;  2BVF A;  3DQ0 A;  2RK5 A;  5FXD A;  2W55 A;  1JRP A;  2IPI A;  5AE3 A;  1VDV A;  3D2H A;  5I1W A;  1W1O A;  3TSH A;  5L6G A;  1HSK A;  1E8G A;  2P3H A;  1AHZ A;  2GQU A;  1JRO A;  1N5W C;  3NVZ B;  5FXP A;  1QLU A;  4HG0 A;  3EUB 3;  1ZR6 A;  2VFT A;  4PVJ A;  3NS1 B;  2R2Z A;  1MBB A;  1WVF A;  5I1V A;  4XLO A;  3RJA A;  1FFU C;  4JB1 A;  2Q4W A;  3JS8 A;  4OAL A;  2VFU A;  3D2J A;  2NQW A;  3PM9 A;  5G5G B;  4PVE A;  4BBY A;  5FXF A;  4EC3 A;  2PLS A;  2VAO A;  1E8F A;  3VTE A;  1AHU A;  5HMR A;  4PVK A;  4BC9 A;  5AE2 A;  3DED A;  3W8W A;  1FO4 A;  3POP A;  3NVV B;  4PWB A;  3RJ8 A;  3FW8 A;  2Y4G A;  5FXE A;  2OAI A;  2P4P A;  3S1F A;  5AE1 A;  5AWV A;  3TSJ A;  2WDW A;  4PZF A;  1MBT A;  3SR6 B;  2UUV A;  1W1M A;  3W8Z A;  1W1L A;  1DII A;  1WVE A;  3AM9 A;  1N60 C;  1V97 A;  1FIQ B;  2E3T A;  3FW7 A;  2PLI A;  3HRD C;  1QLT A;  2W54 A;  3C0P A;  1E8H A;  4UD8 A;  2YVS A;  2VFV A;  4ZOH B;  3FWA A;  1N5X A;  1W1R A;  2VFR A;  4PYT A;  3S1C A;  1RM6 B;  3NVW B;  2R8D A;  1DZN A;  3NRZ B;  2Y3R A;  3PQB A;  1N61 C;  5K8E A;  1ZXI C;  2Y08 A;  2AXR A;  1SB3 B;  3KJM A;  2VFS A;  1W1K A;  2W3S A;  3I99 A;  4O95 A;  2QPM A;  1F0X A;  4JAY A;  1N63 C;  3NVY B;  2Q85 A;  2EXR A;  2O3G A;  3TX1 A;  4BCA A;  3W8X A;  5ADZ A;  2GQT A;  4DNS A;  4ML8 A;  5D79 A;  5HHZ A;  1T3Q C;  2BVG A;  2MBR A;  3LLB A;  4PWC A;  1WYG A;  5L6F A;  3AN1 A;  4MLA A;  1W1S A;  1AHV A;  1DIQ A;  3HSU A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...