2RAXA

Crystal structure of borealin (20-78) bound to survivin (1-120)
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
115
structure length
115
Chain Sequence
TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEELTLGEFLKLDRERAKNKIAKETNN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cell cycle
molecule keywords Baculoviral IAP repeat-containing protein 5
publication title The mitotic regulator Survivin binds as a monomer to its functional interactor Borealin.
pubmed doi rcsb
source organism Homo sapiens
total genus 35
structure length 115
sequence length 115
chains with identical sequence E, X
ec nomenclature
pdb deposition date 2007-09-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00653 BIR Inhibitor of Apoptosis domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1170.10 Mainly Alpha Orthogonal Bundle Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A 2raxA00
4A0IA 4HY4A 3UW4A 1Q4QA 5C7CA 3UECA 3UEEA 5C7AA 1OXQA 1QBHA 1F3HA 3UIKA 5C0KA 3F7HA 3OZ1A 3UEHA 1XOXA 4MTIA 3UIIA 3F7GA 4A0JA 2OPYA 1TW6A 3M1DA 5C3HA 3GTAA 3D9TA 3UIJA 1XB1A 4J45A 4KMPA 2OPZA 2POIA 3UEIA 1NW9A 5C3KA 4A0NA 2QRAA 4J46A 1XB0A 4KMNA 3CM7A 3HL5A 3UW5A 1OY7A 3M0AD 4LGEA 5C7BA 4MU7A 5C83A 3CM2A 1C9QA 1TFQA 3G76A 1SDZA 2RAXA 3M0DD 4HY0A 1JD4A 1G3FA 1F9XA 4KJVA 1TFTA 3MUPA 3SIQA 3UEFA 3D9UA 3UIHA 1G73C 2RAWA 5C0LA 4LGUA 3SIPE 4OXCA 4J48A 4J47A 3GT9A 3CLXA 1I3OE 3T6PA 2JK7A 3UEDA 4J3YA 4WVUA 1JD6A 1M4MA 3UIGA 4EB9A 1E31A 3EYLA 2VM5A 4J44A 2POPB 4WVSA 4WVTA 2UVLA 4EC4A 1OXNA 2I3HA 3UEGA 3F7IA 1SE0A 2QFAA 5C84A 4HY5A 2VSLA 5C7DA 4KJUA 4MTZA 1JD5A 2I3IA
chains in the Genus database with same CATH superfamily
4A0IA 4HY4A 3UW4A 1Q4QA 5C7CA 3UECA 3UEEA 5C7AA 1OXQA 1QBHA 1F3HA 3UIKA 5C0KA 3F7HA 3OZ1A 3UEHA 1XOXA 4MTIA 3UIIA 3F7GA 4A0JA 2OPYA 1TW6A 3M1DA 5C3HA 3GTAA 3D9TA 3UIJA 1XB1A 4J45A 4KMPA 2OPZA 2POIA 3UEIA 1NW9A 5C3KA 4A0NA 2QRAA 4J46A 1XB0A 4KMNA 3CM7A 3HL5A 3UW5A 1OY7A 3M0AD 4LGEA 5C7BA 4MU7A 5C83A 3CM2A 1C9QA 1TFQA 3G76A 1SDZA 2RAXA 3M0DD 4HY0A 1JD4A 1G3FA 1F9XA 4KJVA 1TFTA 3MUPA 3SIQA 3UEFA 3D9UA 3UIHA 1G73C 2RAWA 5C0LA 4LGUA 3SIPE 4OXCA 4J48A 4J47A 3GT9A 3CLXA 1I3OE 3T6PA 2JK7A 3UEDA 4J3YA 4WVUA 1JD6A 1M4MA 3UIGA 4EB9A 1E31A 3EYLA 2VM5A 4J44A 2POPB 4WVSA 4WVTA 2UVLA 4EC4A 1OXNA 2I3HA 3UEGA 3F7IA 1SE0A 2QFAA 5C84A 4HY5A 2VSLA 5C7DA 4KJUA 4MTZA 1JD5A 2I3IA
chains in the Genus database with same CATH topology
4A0IA 4HY4A 3UW4A 1Q4QA 5C7CA 3UECA 3UEEA 5C7AA 1OXQA 1QBHA 1F3HA 3UIKA 5C0KA 3F7HA 3OZ1A 3UEHA 1XOXA 4MTIA 3UIIA 3F7GA 4A0JA 2OPYA 1TW6A 3M1DA 5C3HA 3GTAA 3D9TA 3UIJA 1XB1A 4J45A 4KMPA 2OPZA 2POIA 3UEIA 1NW9A 5C3KA 4A0NA 2QRAA 4J46A 1XB0A 4KMNA 3CM7A 3HL5A 3UW5A 1OY7A 3M0AD 4LGEA 5C7BA 4MU7A 5C83A 3CM2A 1C9QA 1TFQA 3G76A 1SDZA 2RAXA 3M0DD 4HY0A 1JD4A 1G3FA 1F9XA 4KJVA 1TFTA 3MUPA 3SIQA 3UEFA 3D9UA 3UIHA 1G73C 2RAWA 5C0LA 4LGUA 3SIPE 4OXCA 4J48A 4J47A 3GT9A 3CLXA 1I3OE 3T6PA 2JK7A 3UEDA 4J3YA 4WVUA 1JD6A 1M4MA 3UIGA 4EB9A 1E31A 3EYLA 2VM5A 4J44A 2POPB 4WVSA 4WVTA 2UVLA 4EC4A 1OXNA 2I3HA 3UEGA 3F7IA 1SE0A 2QFAA 5C84A 4HY5A 2VSLA 5C7DA 4KJUA 4MTZA 1JD5A 2I3IA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4A0I A;  4HY4 A;  3UW4 A;  1Q4Q A;  5C7C A;  3UEC A;  3UEE A;  5C7A A;  1OXQ A;  1QBH A;  1F3H A;  3UIK A;  5C0K A;  3F7H A;  3OZ1 A;  3UEH A;  1XOX A;  4MTI A;  3UII A;  3F7G A;  4A0J A;  2OPY A;  1TW6 A;  3M1D A;  5C3H A;  3GTA A;  3D9T A;  3UIJ A;  1XB1 A;  4J45 A;  4KMP A;  2OPZ A;  2POI A;  3UEI A;  1NW9 A;  5C3K A;  4A0N A;  2QRA A;  4J46 A;  1XB0 A;  4KMN A;  3CM7 A;  3HL5 A;  3UW5 A;  1OY7 A;  3M0A D;  4LGE A;  5C7B A;  4MU7 A;  5C83 A;  3CM2 A;  1C9Q A;  1TFQ A;  3G76 A;  1SDZ A;  2RAX A;  3M0D D;  4HY0 A;  1JD4 A;  1G3F A;  1F9X A;  4KJV A;  1TFT A;  3MUP A;  3SIQ A;  3UEF A;  3D9U A;  3UIH A;  1G73 C;  2RAW A;  5C0L A;  4LGU A;  3SIP E;  4OXC A;  4J48 A;  4J47 A;  3GT9 A;  3CLX A;  1I3O E;  3T6P A;  2JK7 A;  3UED A;  4J3Y A;  4WVU A;  1JD6 A;  1M4M A;  3UIG A;  4EB9 A;  1E31 A;  3EYL A;  2VM5 A;  4J44 A;  2POP B;  4WVS A;  4WVT A;  2UVL A;  4EC4 A;  1OXN A;  2I3H A;  3UEG A;  3F7I A;  1SE0 A;  2QFA A;  5C84 A;  4HY5 A;  2VSL A;  5C7D A;  4KJU A;  4MTZ A;  1JD5 A;  2I3I A; 
#chains in the Genus database with same CATH topology
 4A0I A;  4HY4 A;  3UW4 A;  1Q4Q A;  5C7C A;  3UEC A;  3UEE A;  5C7A A;  1OXQ A;  1QBH A;  1F3H A;  3UIK A;  5C0K A;  3F7H A;  3OZ1 A;  3UEH A;  1XOX A;  4MTI A;  3UII A;  3F7G A;  4A0J A;  2OPY A;  1TW6 A;  3M1D A;  5C3H A;  3GTA A;  3D9T A;  3UIJ A;  1XB1 A;  4J45 A;  4KMP A;  2OPZ A;  2POI A;  3UEI A;  1NW9 A;  5C3K A;  4A0N A;  2QRA A;  4J46 A;  1XB0 A;  4KMN A;  3CM7 A;  3HL5 A;  3UW5 A;  1OY7 A;  3M0A D;  4LGE A;  5C7B A;  4MU7 A;  5C83 A;  3CM2 A;  1C9Q A;  1TFQ A;  3G76 A;  1SDZ A;  2RAX A;  3M0D D;  4HY0 A;  1JD4 A;  1G3F A;  1F9X A;  4KJV A;  1TFT A;  3MUP A;  3SIQ A;  3UEF A;  3D9U A;  3UIH A;  1G73 C;  2RAW A;  5C0L A;  4LGU A;  3SIP E;  4OXC A;  4J48 A;  4J47 A;  3GT9 A;  3CLX A;  1I3O E;  3T6P A;  2JK7 A;  3UED A;  4J3Y A;  4WVU A;  1JD6 A;  1M4M A;  3UIG A;  4EB9 A;  1E31 A;  3EYL A;  2VM5 A;  4J44 A;  2POP B;  4WVS A;  4WVT A;  2UVL A;  4EC4 A;  1OXN A;  2I3H A;  3UEG A;  3F7I A;  1SE0 A;  2QFA A;  5C84 A;  4HY5 A;  2VSL A;  5C7D A;  4KJU A;  4MTZ A;  1JD5 A;  2I3I A; 
#chains in the Genus database with same CATH homology
 4A0I A;  4HY4 A;  3UW4 A;  1Q4Q A;  5C7C A;  3UEC A;  3UEE A;  5C7A A;  1OXQ A;  1QBH A;  1F3H A;  3UIK A;  5C0K A;  3F7H A;  3OZ1 A;  3UEH A;  1XOX A;  4MTI A;  3UII A;  3F7G A;  4A0J A;  2OPY A;  1TW6 A;  3M1D A;  5C3H A;  3GTA A;  3D9T A;  3UIJ A;  1XB1 A;  4J45 A;  4KMP A;  2OPZ A;  2POI A;  3UEI A;  1NW9 A;  5C3K A;  4A0N A;  2QRA A;  4J46 A;  1XB0 A;  4KMN A;  3CM7 A;  3HL5 A;  3UW5 A;  1OY7 A;  3M0A D;  4LGE A;  5C7B A;  4MU7 A;  5C83 A;  3CM2 A;  1C9Q A;  1TFQ A;  3G76 A;  1SDZ A;  2RAX A;  3M0D D;  4HY0 A;  1JD4 A;  1G3F A;  1F9X A;  4KJV A;  1TFT A;  3MUP A;  3SIQ A;  3UEF A;  3D9U A;  3UIH A;  1G73 C;  2RAW A;  5C0L A;  4LGU A;  3SIP E;  4OXC A;  4J48 A;  4J47 A;  3GT9 A;  3CLX A;  1I3O E;  3T6P A;  2JK7 A;  3UED A;  4J3Y A;  4WVU A;  1JD6 A;  1M4M A;  3UIG A;  4EB9 A;  1E31 A;  3EYL A;  2VM5 A;  4J44 A;  2POP B;  4WVS A;  4WVT A;  2UVL A;  4EC4 A;  1OXN A;  2I3H A;  3UEG A;  3F7I A;  1SE0 A;  2QFA A;  5C84 A;  4HY5 A;  2VSL A;  5C7D A;  4KJU A;  4MTZ A;  1JD5 A;  2I3I A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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