2REAA

Crystal structures of c2alpha-pi3 kinase px-domain domain indicate conformational change associated with ligand binding.
Total Genus 30
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
30
sequence length
116
structure length
116
Chain Sequence
DGRIKEVSVFTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFPNRMVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHGSHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containi
publication title Crystal structures of PI3K-C2alpha PX domain indicate conformational change associated with ligand binding
pubmed doi rcsb
source organism Homo sapiens
total genus 30
structure length 116
sequence length 116
ec nomenclature ec 2.7.1.154: Phosphatidylinositol-4-phosphate 3-kinase.
pdb deposition date 2007-09-26
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1520.10 Alpha Beta 2-Layer Sandwich PX Domain Phox-like domain 2reaA00
4IKBA 1KQ6A 2V14A 2RAKA 2WWEA 4OXWA 4PZGA 3HPBA 4PQPA 2I4KA 4P2IA 3FOGA 2CSKA 2DYBA 4AZ9A 2REDA 2RAJA 4P2JA 2YPSA 3P0CA 4PQOA 2IWLX 2REAA 1OCUA 4HASA 4IKDA 4BGJA 1GD5A 1OCSA 1XTNA 3HPCX 2ETTA 2CZOA 1XTEA 3DYTA 3IQ2A 4IKBB 1KMDA 2RAIA 2AR5A 4AKVA 2V6VA 4ON3A 2L73A 3LUIA 1H6HA 1O7KA
chains in the Genus database with same CATH superfamily
4IKBA 1KQ6A 2V14A 2RAKA 2WWEA 4OXWA 4PZGA 3HPBA 4PQPA 2I4KA 4P2IA 3FOGA 2CSKA 2DYBA 4AZ9A 2REDA 2RAJA 4P2JA 2YPSA 3P0CA 4PQOA 2IWLX 2REAA 1OCUA 4HASA 4IKDA 4BGJA 1GD5A 1OCSA 1XTNA 3HPCX 2ETTA 2CZOA 1XTEA 3DYTA 3IQ2A 4IKBB 1KMDA 2RAIA 2AR5A 4AKVA 2V6VA 4ON3A 2L73A 3LUIA 1H6HA 1O7KA
chains in the Genus database with same CATH topology
4IKBA 1KQ6A 2V14A 2RAKA 2WWEA 4OXWA 4PZGA 3HPBA 4PQPA 2I4KA 4P2IA 3FOGA 2CSKA 2DYBA 4AZ9A 2REDA 2RAJA 4P2JA 2YPSA 3P0CA 4PQOA 2IWLX 2REAA 1OCUA 4HASA 4IKDA 4BGJA 1GD5A 1OCSA 1XTNA 3HPCX 2ETTA 2CZOA 1XTEA 3DYTA 3IQ2A 4IKBB 1KMDA 2RAIA 2AR5A 4AKVA 2V6VA 4ON3A 2L73A 3LUIA 1H6HA 1O7KA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IKB A;  1KQ6 A;  2V14 A;  2RAK A;  2WWE A;  4OXW A;  4PZG A;  3HPB A;  4PQP A;  2I4K A;  4P2I A;  3FOG A;  2CSK A;  2DYB A;  4AZ9 A;  2RED A;  2RAJ A;  4P2J A;  2YPS A;  3P0C A;  4PQO A;  2IWL X;  2REA A;  1OCU A;  4HAS A;  4IKD A;  4BGJ A;  1GD5 A;  1OCS A;  1XTN A;  3HPC X;  2ETT A;  2CZO A;  1XTE A;  3DYT A;  3IQ2 A;  4IKB B;  1KMD A;  2RAI A;  2AR5 A;  4AKV A;  2V6V A;  4ON3 A;  2L73 A;  3LUI A;  1H6H A;  1O7K A; 
#chains in the Genus database with same CATH topology
 4IKB A;  1KQ6 A;  2V14 A;  2RAK A;  2WWE A;  4OXW A;  4PZG A;  3HPB A;  4PQP A;  2I4K A;  4P2I A;  3FOG A;  2CSK A;  2DYB A;  4AZ9 A;  2RED A;  2RAJ A;  4P2J A;  2YPS A;  3P0C A;  4PQO A;  2IWL X;  2REA A;  1OCU A;  4HAS A;  4IKD A;  4BGJ A;  1GD5 A;  1OCS A;  1XTN A;  3HPC X;  2ETT A;  2CZO A;  1XTE A;  3DYT A;  3IQ2 A;  4IKB B;  1KMD A;  2RAI A;  2AR5 A;  4AKV A;  2V6V A;  4ON3 A;  2L73 A;  3LUI A;  1H6H A;  1O7K A; 
#chains in the Genus database with same CATH homology
 4IKB A;  1KQ6 A;  2V14 A;  2RAK A;  2WWE A;  4OXW A;  4PZG A;  3HPB A;  4PQP A;  2I4K A;  4P2I A;  3FOG A;  2CSK A;  2DYB A;  4AZ9 A;  2RED A;  2RAJ A;  4P2J A;  2YPS A;  3P0C A;  4PQO A;  2IWL X;  2REA A;  1OCU A;  4HAS A;  4IKD A;  4BGJ A;  1GD5 A;  1OCS A;  1XTN A;  3HPC X;  2ETT A;  2CZO A;  1XTE A;  3DYT A;  3IQ2 A;  4IKB B;  1KMD A;  2RAI A;  2AR5 A;  4AKV A;  2V6V A;  4ON3 A;  2L73 A;  3LUI A;  1H6H A;  1O7K A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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