2RT6A

Backbone 1h, 13c, and 15n chemical shift assignments for pric n-terminal domain
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
98
structure length
98
Chain Sequence
MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Primosomal replication protein N''
publication title Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.
pubmed doi rcsb
source organism Escherichia coli
molecule tags Dna binding protein
total genus 32
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2013-04-24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.340 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 2rt6A00
2RT6A
chains in the Genus database with same CATH superfamily
4PO2A 3I2WA 2Z0NA 3GI7A 1SU7A 4I1QA 4AZBA 4HY9A 3SYVA 4AVMA 2ND0A 4IW0A 1QWNA 3ABHA 2RT6A 3VEAA 1MJGA 3PLTA 2YL5A 3BUIA 3D4YA 3BVUA 2YI8A 1HTYA 1GNTA 3BUPA 3BVVA 4EZNA 2X3VA 2O0I1 4HYBA 4IWPA 1ZYLA 4UDXX 4FZOA 3I01A 3D52A 3EJSA 1TQWA 3D2FA 2ELBA 4ATMA 3B52X 1E1DA 2GF4A 3EJRA 1URUA 4JWCA 2EWFA 1R34A 4KIKB 5E84A 4DYLA 2F7RA 2MI7A 3CZNA 2ND1A 2LM0A 3DX2A 3T4AG 3LVTA 3B51X 2YL6A 4R5KA 4H6HA 2QXLA 3CZSA 4G6QA 4AZ6A 4EZXA 1TQTA 3LMFA 4DCNC 4NQIA 3T49A 4IM2A 2V0OA 1E9VA 4EZSA 4HR1A 3L3OM 1I4TA 4EZRA 4JWDA 3DX1A 2OO2A 1LQ7A 2F7OA 2EX3B 2X3XA 2FYVA 3I04A 1WDZA 1R5EA 2PY6A 3EJUA 1GNLA 3O3OB 3HAJA 4R5JA 4H8SA 3DX4A 3BUDA 4AZCA 4H6IA 3DDFA 3OWGA 1DKZA 2GAFD 4NSWA 4F00A 5TKYA 1E2UA 4IWOA 2YI9A 2QKWA 1SUFA 3CVRA 3G9GA 3D2EA 3CKDA 2OW7A 3C7NA 3QNJA 1UPXA 5FIGA 4JLCA 1SU8A 4E81A 3QNIA 1X03A 3T46A 4R5IA 2Z0VA 2GA9D 3BVTA 3A98A 3LLLA 4R5LA 2RAIA 3ACOA 4D8JA 3B53X 1OAOA 1SU6A 3RV1A 1PS3A 3DPQA 1I49A 2QFFA 3EJPA 4EZVA 4JL9A 1U00A 2C08A 2YL8A 4EZWA 2KHOA 2YLAA 3UITA 3D51A 2ALWA 2YIVX 4AZ7A 1TQUA 1I4DA 3D50A 2Z8YA 2Z0OA 4BNEA 5KBPA 2WINM 3BUBA 5C5BA 3F7WA 2X3WA 3O3MB 4FM3A 2F7PA 1DKYA 4JWEA 4F01A 2RAKA 2FICA 2EFLA 3OK8A 4R5GA 3DPPA 2X5CA 3OHXM 3QA8A 3DX3A 3SOGA 1OA0A 4EZOA 2JNSA 2OW6A 2OBMA 3VEBA 3BLBA 3EJQA 3ZEDA 4FZPA 2JNKA 3KDRA 4EZUA 4IM0A 3FD9A 1R33A 3DDGA 2N3KA 1OA1A 4EZYA 2NCZA 2D4CA 3M3WA 3RV0A 2YL9A 4AKVA 3BUQA 2YIBA 4E3CA 3KAVA 4AZHA 2F1BA 2WYHA 3EJTA 1O7DB 4AZCB 4WPEA 2PMRA 1HWWA 1Y2OA 3DX0A 2OZNB 3HAHA 3DPOA 2F1AA 3T48A 4B9QA 3ER8C 3KAWA 4NPHA 2D1LA 4EZZA 2F7QA 3DYTA 4AZ5A 2YLLA 3CAZA 3Q0KA 3O3NB 1I4LA 4JN4A 4JNFA 4KIKA 1O7DC 3BVWA 4FZSA 2WYIA 2YIAA 1ZWWA 4EZTA 4JWIA 2F18A 4JNEA 5FLEX 4EZPA 2Q13A 3BVXA 3QWEA 1HXKA 1JQKA 3ER9B 3Q84A 2Q12A 1GN9A 3L3PA 4AZIA 1DKXA 3VKHA 4IWQA 1W9MA 3I39X 2ZXQA 1YWMA 1QX1A 3T47A 2OBLA 3D4ZA 5C5BB 3HAIA 4EZQA 2RAJA 2EFKA 4WPCA 4HR1B 1TQVA 3QE6A 4UDYX 3CV5A 4M0MA 2LXYA 3ERCC 4AZGA 2YKTA 1X04A 3RPMA 1QWUA 4IM3A 1TQSA
chains in the Genus database with same CATH topology
2KHOA 4PO2A 4HR1A 3L3OM 3GI7A 1SU7A 3UITA 3T48A 4EZRA 4B9QA 3ER8C 2YIVX 3KAWA 4JWDA 4NPHA 2Z8YA 4HY9A 4EZZA 2WINM 2EX3B 3F7WA 2ND0A 3O3NB 3I04A 4JN4A 3O3MB 4IW0A 4JNFA 4KIKA 4FM3A 2RT6A 2PY6A 2YIAA 3VEAA 1GNLA 1DKYA 3O3OB 4JWEA 4EZTA 4JWIA 4R5JA 4F01A 4JNEA 5FLEX 4R5GA 4EZPA 3DPPA 1MJGA 4H6IA 2X5CA 3OHXM 3OWGA 1DKZA 3QA8A 2GAFD 1OA0A 4EZOA 1JQKA 2JNSA 2YI8A 3ER9B 4F00A 5TKYA 2OBMA 1E2UA 3VEBA 4IWOA 1GN9A 1GNTA 2YI9A 3ZEDA 1SUFA 4EZNA 1DKXA 3VKHA 4IWQA 3D2EA 1W9MA 4HYBA 3C7NA 4IWPA 3QNJA 1UPXA 1ZYLA 3I39X 3KDRA 5FIGA 4EZUA 4IM0A 4JLCA 4UDXX 1SU8A 3FD9A 3I01A 4E81A 3T47A 2OBLA 3T46A 2N3KA 3D2FA 3B52X 4R5IA 1OA1A 1E1DA 2GA9D 4EZYA 2NCZA 3A98A 3RV0A 4JWCA 4EZQA 4R5LA 2EWFA 4KIKB 5E84A 2YIBA 4EZSA 4E3CA 4D8JA 3KAVA 3B53X 4HR1B 2ND1A 2LM0A 1OAOA 1SU6A 3RV1A 4UDYX 3T4AG 4M0MA 3B51X 4R5KA 4H6HA 3DPQA 2QXLA 3ERCC 4G6QA 4EZXA 2QFFA 3LMFA 3T49A 4EZVA 4IM2A 4JL9A 1U00A 4IM3A 1E9VA 3DPOA 4EZWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RT6 A; 
#chains in the Genus database with same CATH topology
 4PO2 A;  3I2W A;  2Z0N A;  3GI7 A;  1SU7 A;  4I1Q A;  4AZB A;  4HY9 A;  3SYV A;  4AVM A;  2ND0 A;  4IW0 A;  1QWN A;  3ABH A;  2RT6 A;  3VEA A;  1MJG A;  3PLT A;  2YL5 A;  3BUI A;  3D4Y A;  3BVU A;  2YI8 A;  1HTY A;  1GNT A;  3BUP A;  3BVV A;  4EZN A;  2X3V A;  2O0I 1;  4HYB A;  4IWP A;  1ZYL A;  4UDX X;  4FZO A;  3I01 A;  3D52 A;  3EJS A;  1TQW A;  3D2F A;  2ELB A;  4ATM A;  3B52 X;  1E1D A;  2GF4 A;  3EJR A;  1URU A;  4JWC A;  2EWF A;  1R34 A;  4KIK B;  5E84 A;  4DYL A;  2F7R A;  2MI7 A;  3CZN A;  2ND1 A;  2LM0 A;  3DX2 A;  3T4A G;  3LVT A;  3B51 X;  2YL6 A;  4R5K A;  4H6H A;  2QXL A;  3CZS A;  4G6Q A;  4AZ6 A;  4EZX A;  1TQT A;  3LMF A;  4DCN C;  4NQI A;  3T49 A;  4IM2 A;  2V0O A;  1E9V A;  4EZS A;  4HR1 A;  3L3O M;  1I4T A;  4EZR A;  4JWD A;  3DX1 A;  2OO2 A;  1LQ7 A;  2F7O A;  2EX3 B;  2X3X A;  2FYV A;  3I04 A;  1WDZ A;  1R5E A;  2PY6 A;  3EJU A;  1GNL A;  3O3O B;  3HAJ A;  4R5J A;  4H8S A;  3DX4 A;  3BUD A;  4AZC A;  4H6I A;  3DDF A;  3OWG A;  1DKZ A;  2GAF D;  4NSW A;  4F00 A;  5TKY A;  1E2U A;  4IWO A;  2YI9 A;  2QKW A;  1SUF A;  3CVR A;  3G9G A;  3D2E A;  3CKD A;  2OW7 A;  3C7N A;  3QNJ A;  1UPX A;  5FIG A;  4JLC A;  1SU8 A;  4E81 A;  3QNI A;  1X03 A;  3T46 A;  4R5I A;  2Z0V A;  2GA9 D;  3BVT A;  3A98 A;  3LLL A;  4R5L A;  2RAI A;  3ACO A;  4D8J A;  3B53 X;  1OAO A;  1SU6 A;  3RV1 A;  1PS3 A;  3DPQ A;  1I49 A;  2QFF A;  3EJP A;  4EZV A;  4JL9 A;  1U00 A;  2C08 A;  2YL8 A;  4EZW A;  2KHO A;  2YLA A;  3UIT A;  3D51 A;  2ALW A;  2YIV X;  4AZ7 A;  1TQU A;  1I4D A;  3D50 A;  2Z8Y A;  2Z0O A;  4BNE A;  5KBP A;  2WIN M;  3BUB A;  5C5B A;  3F7W A;  2X3W A;  3O3M B;  4FM3 A;  2F7P A;  1DKY A;  4JWE A;  4F01 A;  2RAK A;  2FIC A;  2EFL A;  3OK8 A;  4R5G A;  3DPP A;  2X5C A;  3OHX M;  3QA8 A;  3DX3 A;  3SOG A;  1OA0 A;  4EZO A;  2JNS A;  2OW6 A;  2OBM A;  3VEB A;  3BLB A;  3EJQ A;  3ZED A;  4FZP A;  2JNK A;  3KDR A;  4EZU A;  4IM0 A;  3FD9 A;  1R33 A;  3DDG A;  2N3K A;  1OA1 A;  4EZY A;  2NCZ A;  2D4C A;  3M3W A;  3RV0 A;  2YL9 A;  4AKV A;  3BUQ A;  2YIB A;  4E3C A;  3KAV A;  4AZH A;  2F1B A;  2WYH A;  3EJT A;  1O7D B;  4AZC B;  4WPE A;  2PMR A;  1HWW A;  1Y2O A;  3DX0 A;  2OZN B;  3HAH A;  3DPO A;  2F1A A;  3T48 A;  4B9Q A;  3ER8 C;  3KAW A;  4NPH A;  2D1L A;  4EZZ A;  2F7Q A;  3DYT A;  4AZ5 A;  2YLL A;  3CAZ A;  3Q0K A;  3O3N B;  1I4L A;  4JN4 A;  4JNF A;  4KIK A;  1O7D C;  3BVW A;  4FZS A;  2WYI A;  2YIA A;  1ZWW A;  4EZT A;  4JWI A;  2F18 A;  4JNE A;  5FLE X;  4EZP A;  2Q13 A;  3BVX A;  3QWE A;  1HXK A;  1JQK A;  3ER9 B;  3Q84 A;  2Q12 A;  1GN9 A;  3L3P A;  4AZI A;  1DKX A;  3VKH A;  4IWQ A;  1W9M A;  3I39 X;  2ZXQ A;  1YWM A;  1QX1 A;  3T47 A;  2OBL A;  3D4Z A;  5C5B B;  3HAI A;  4EZQ A;  2RAJ A;  2EFK A;  4WPC A;  4HR1 B;  1TQV A;  3QE6 A;  4UDY X;  3CV5 A;  4M0M A;  2LXY A;  3ERC C;  4AZG A;  2YKT A;  1X04 A;  3RPM A;  1QWU A;  4IM3 A;  1TQS A; 
#chains in the Genus database with same CATH homology
 2KHO A;  4PO2 A;  4HR1 A;  3L3O M;  3GI7 A;  1SU7 A;  3UIT A;  3T48 A;  4EZR A;  4B9Q A;  3ER8 C;  2YIV X;  3KAW A;  4JWD A;  4NPH A;  2Z8Y A;  4HY9 A;  4EZZ A;  2WIN M;  2EX3 B;  3F7W A;  2ND0 A;  3O3N B;  3I04 A;  4JN4 A;  3O3M B;  4IW0 A;  4JNF A;  4KIK A;  4FM3 A;  2RT6 A;  2PY6 A;  2YIA A;  3VEA A;  1GNL A;  1DKY A;  3O3O B;  4JWE A;  4EZT A;  4JWI A;  4R5J A;  4F01 A;  4JNE A;  5FLE X;  4R5G A;  4EZP A;  3DPP A;  1MJG A;  4H6I A;  2X5C A;  3OHX M;  3OWG A;  1DKZ A;  3QA8 A;  2GAF D;  1OA0 A;  4EZO A;  1JQK A;  2JNS A;  2YI8 A;  3ER9 B;  4F00 A;  5TKY A;  2OBM A;  1E2U A;  3VEB A;  4IWO A;  1GN9 A;  1GNT A;  2YI9 A;  3ZED A;  1SUF A;  4EZN A;  1DKX A;  3VKH A;  4IWQ A;  3D2E A;  1W9M A;  4HYB A;  3C7N A;  4IWP A;  3QNJ A;  1UPX A;  1ZYL A;  3I39 X;  3KDR A;  5FIG A;  4EZU A;  4IM0 A;  4JLC A;  4UDX X;  1SU8 A;  3FD9 A;  3I01 A;  4E81 A;  3T47 A;  2OBL A;  3T46 A;  2N3K A;  3D2F A;  3B52 X;  4R5I A;  1OA1 A;  1E1D A;  2GA9 D;  4EZY A;  2NCZ A;  3A98 A;  3RV0 A;  4JWC A;  4EZQ A;  4R5L A;  2EWF A;  4KIK B;  5E84 A;  2YIB A;  4EZS A;  4E3C A;  4D8J A;  3KAV A;  3B53 X;  4HR1 B;  2ND1 A;  2LM0 A;  1OAO A;  1SU6 A;  3RV1 A;  4UDY X;  3T4A G;  4M0M A;  3B51 X;  4R5K A;  4H6H A;  3DPQ A;  2QXL A;  3ERC C;  4G6Q A;  4EZX A;  2QFF A;  3LMF A;  3T49 A;  4EZV A;  4IM2 A;  4JL9 A;  1U00 A;  4IM3 A;  1E9V A;  3DPO A;  4EZW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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