2RT6A

Backbone 1h, 13c, and 15n chemical shift assignments for pric n-terminal domain
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
98
structure length
98
Chain Sequence
MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.
pubmed doi rcsb
molecule keywords Primosomal replication protein N''
source organism Escherichia coli
molecule tags Dna binding protein
total genus 32
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2013-04-24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.340 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 2rt6A00
2RT6A
chains in the Genus database with same CATH superfamily
2F1BA 2JNKA 3Q84A 3I39X 3CZSA 1I4DA 3VEBA 3ACOA 2Z0NA 4BNEA 2YI8A 2KHOA 2GA9D 2OBLA 3CKDA 4M0MA 4PO2A 3EJRA 3QWEA 2O0I1 3D4ZA 3ZEDA 3O3NB 2WYHA 3HAJA 2YI9A 4HR1A 2RAJA 4FZSA 4AZIA 3BUPA 4EZTA 1JQKA 2MI7A 3I01A 4HYBA 4EZYA 2X3WA 3M3WA 1Y2OA 2RAIA 1HWWA 3D52A 2ND0A 1MJGA 1TQTA 4AZ7A 4AZ5A 2NCZA 1SU6A 2PY6A 4H6HA 2YLLA 4AZHA 4E81A 4JN4A 3D2EA 2F1AA 2YLAA 1R5EA 3G9GA 2FYVA 4JNFA 2PMRA 2Z0VA 3Q0KA 2F7PA 3D4YA 2JNSA 2EWFA 2GAFD 4IW0A 3QNIA 1SU7A 1X04A 1GN9A 3CV5A 1UPXA 3HAIA 4R5GA 4R5LA 1TQUA 4IWOA 3DX2A 4DCNC 4JWEA 2RAKA 3BVVA 3ABHA 4I1QA 4JWCA 3ER9B 3DYTA 2GF4A 1I4LA 2F18A 3PLTA 4AKVA 1I49A 4D8JA 2D1LA 3VKHA 3QE6A 3O3MB 1R33A 2ELBA 2YKTA 4EZPA 2Q13A 2YIAA 3L3PA 3CAZA 4DYLA 2OZNB 2YL6A 4E3CA 1W9MA 2QXLA 3T4AG 2X5CA 3CZNA 1WDZA 2X3XA 2OO2A 3KAVA 3BUIA 2OW7A 3LVTA 3QA8A 1O7DC 3BVWA 4EZWA 3ERCC 3DPQA 1I4TA 4FZOA 4KIKB 1ZYLA 4EZRA 4AVMA 3VEAA 2EX3B 3HAHA 3EJPA 3D2FA 4H6IA 3B53X 4UDXX 4EZXA 3EJSA 2WYIA 2YIVX 4IM2A 1OA0A 1URUA 2WINM 3BUBA 3DPOA 3I2WA 4EZOA 3T48A 4NPHA 4IWQA 3BVXA 3DX1A 3T47A 3RPMA 1ZWWA 5E84A 1QWNA 2EFLA 1QX1A 3KDRA 2F7RA 4AZCB 1LQ7A 3KAWA 2EFKA 1DKZA 2V0OA 2N3KA 4IM0A 1R34A 3BVTA 4EZUA 3B52X 1DKXA 2ND1A 4G6QA 4FM3A 2LM0A 3O3OB 1HXKA 3DX0A 4AZGA 5C5BB 3UITA 1TQWA 2YL9A 3BLBA 5FLEX 3BUDA 3SYVA 4F00A 3D51A 4EZSA 3DX4A 3B51X 4JWDA 2YL5A 3CVRA 4JNEA 4KIKA 3F7WA 3LMFA 4H8SA 1QWUA 3DDFA 4IWPA 3EJUA 3T46A 4WPEA 4R5KA 3LLLA 2X3VA 5TKYA 1SU8A 1E1DA 1E2UA 2LXYA 3OK8A 3DDGA 3DX3A 4B9QA 1O7DB 1GNLA 1HTYA 3A98A 4AZCA 1TQSA 2ALWA 1TQVA 3I04A 3EJQA 2D4CA 3BVUA 1OA1A 3OHXM 4AZ6A 3EJTA 4EZVA 2OW6A 4ATMA 1SUFA 4HR1B 4JLCA 3D50A 5C5BA 3GI7A 4FZPA 5FIGA 1U00A 4EZNA 3QNJA 4WPCA 2C08A 3SOGA 2QFFA 1E9VA 2QKWA 3RV1A 2ZXQA 2Z0OA 1YWMA 4NQIA 1PS3A 2YIBA 1X03A 2YL8A 3ER8C 3OWGA 3L3OM 3BUQA 4R5JA 3T49A 4AZBA 2OBMA 3DPPA 2F7QA 4IM3A 4UDYX 4JL9A 4JWIA 4NSWA 4R5IA 4F01A 5KBPA 2F7OA 1GNTA 4EZQA 4EZZA 3FD9A 4HY9A 1OAOA 2Q12A 2Z8YA 3C7NA 3RV0A 2FICA 2RT6A 1DKYA
chains in the Genus database with same CATH topology
4B9QA 4JWEA 3I39X 3VEBA 1GNLA 3A98A 4JWCA 3ER9B 3KDRA 2YI8A 3KAWA 1DKZA 2KHOA 2GA9D 2N3KA 2OBLA 4M0MA 4IM0A 4D8JA 3VKHA 3I04A 4PO2A 1OA1A 3O3MB 3OHXM 4EZUA 3B52X 4EZPA 1DKXA 3ZEDA 2YIAA 3O3NB 4EZVA 2ND1A 4G6QA 4FM3A 1SUFA 2LM0A 2YI9A 4HR1A 3O3OB 4HR1B 4JLCA 3GI7A 4EZTA 3UITA 1JQKA 5FIGA 3I01A 4E3CA 1W9MA 4HYBA 1U00A 5FLEX 4EZNA 2QXLA 3QNJA 5E84A 3T4AG 4EZYA 2X5CA 2QFFA 1E9VA 4F00A 4EZSA 3RV1A 3KAVA 3B51X 2ND0A 1MJGA 4JWDA 3QA8A 2NCZA 1SU6A 2YIBA 4JNEA 3ER8C 3OWGA 4EZWA 3L3OM 3ERCC 3DPQA 2PY6A 4H6HA 4KIKA 4E81A 4JN4A 3F7WA 3LMFA 3D2EA 4R5JA 3T49A 4KIKB 1ZYLA 4EZRA 3VEAA 2EX3B 2OBMA 3DPPA 3D2FA 4IM3A 4UDYX 4H6IA 4JL9A 3B53X 4IWPA 4JNFA 4UDXX 4JWIA 4R5IA 4EZXA 3T46A 2YIVX 2JNSA 4F01A 2EWFA 4IM2A 1OA0A 2GAFD 4R5KA 1GNTA 4EZQA 2WINM 4EZZA 3FD9A 3DPOA 4HY9A 4IW0A 1OAOA 1SU7A 1SU8A 5TKYA 1GN9A 1E1DA 4EZOA 2Z8YA 1E2UA 3T48A 4NPHA 4IWQA 3C7NA 1UPXA 3RV0A 2RT6A 3T47A 1DKYA 4R5GA 4R5LA 4IWOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RT6 A; 
#chains in the Genus database with same CATH topology
 2F1B A;  2JNK A;  3Q84 A;  3I39 X;  3CZS A;  1I4D A;  3VEB A;  3ACO A;  2Z0N A;  4BNE A;  2YI8 A;  2KHO A;  2GA9 D;  2OBL A;  3CKD A;  4M0M A;  4PO2 A;  3EJR A;  3QWE A;  2O0I 1;  3D4Z A;  3ZED A;  3O3N B;  2WYH A;  3HAJ A;  2YI9 A;  4HR1 A;  2RAJ A;  4FZS A;  4AZI A;  3BUP A;  4EZT A;  1JQK A;  2MI7 A;  3I01 A;  4HYB A;  4EZY A;  2X3W A;  3M3W A;  1Y2O A;  2RAI A;  1HWW A;  3D52 A;  2ND0 A;  1MJG A;  1TQT A;  4AZ7 A;  4AZ5 A;  2NCZ A;  1SU6 A;  2PY6 A;  4H6H A;  2YLL A;  4AZH A;  4E81 A;  4JN4 A;  3D2E A;  2F1A A;  2YLA A;  1R5E A;  3G9G A;  2FYV A;  4JNF A;  2PMR A;  2Z0V A;  3Q0K A;  2F7P A;  3D4Y A;  2JNS A;  2EWF A;  2GAF D;  4IW0 A;  3QNI A;  1SU7 A;  1X04 A;  1GN9 A;  3CV5 A;  1UPX A;  3HAI A;  4R5G A;  4R5L A;  1TQU A;  4IWO A;  3DX2 A;  4DCN C;  4JWE A;  2RAK A;  3BVV A;  3ABH A;  4I1Q A;  4JWC A;  3ER9 B;  3DYT A;  2GF4 A;  1I4L A;  2F18 A;  3PLT A;  4AKV A;  1I49 A;  4D8J A;  2D1L A;  3VKH A;  3QE6 A;  3O3M B;  1R33 A;  2ELB A;  2YKT A;  4EZP A;  2Q13 A;  2YIA A;  3L3P A;  3CAZ A;  4DYL A;  2OZN B;  2YL6 A;  4E3C A;  1W9M A;  2QXL A;  3T4A G;  2X5C A;  3CZN A;  1WDZ A;  2X3X A;  2OO2 A;  3KAV A;  3BUI A;  2OW7 A;  3LVT A;  3QA8 A;  1O7D C;  3BVW A;  4EZW A;  3ERC C;  3DPQ A;  1I4T A;  4FZO A;  4KIK B;  1ZYL A;  4EZR A;  4AVM A;  3VEA A;  2EX3 B;  3HAH A;  3EJP A;  3D2F A;  4H6I A;  3B53 X;  4UDX X;  4EZX A;  3EJS A;  2WYI A;  2YIV X;  4IM2 A;  1OA0 A;  1URU A;  2WIN M;  3BUB A;  3DPO A;  3I2W A;  4EZO A;  3T48 A;  4NPH A;  4IWQ A;  3BVX A;  3DX1 A;  3T47 A;  3RPM A;  1ZWW A;  5E84 A;  1QWN A;  2EFL A;  1QX1 A;  3KDR A;  2F7R A;  4AZC B;  1LQ7 A;  3KAW A;  2EFK A;  1DKZ A;  2V0O A;  2N3K A;  4IM0 A;  1R34 A;  3BVT A;  4EZU A;  3B52 X;  1DKX A;  2ND1 A;  4G6Q A;  4FM3 A;  2LM0 A;  3O3O B;  1HXK A;  3DX0 A;  4AZG A;  5C5B B;  3UIT A;  1TQW A;  2YL9 A;  3BLB A;  5FLE X;  3BUD A;  3SYV A;  4F00 A;  3D51 A;  4EZS A;  3DX4 A;  3B51 X;  4JWD A;  2YL5 A;  3CVR A;  4JNE A;  4KIK A;  3F7W A;  3LMF A;  4H8S A;  1QWU A;  3DDF A;  4IWP A;  3EJU A;  3T46 A;  4WPE A;  4R5K A;  3LLL A;  2X3V A;  5TKY A;  1SU8 A;  1E1D A;  1E2U A;  2LXY A;  3OK8 A;  3DDG A;  3DX3 A;  4B9Q A;  1O7D B;  1GNL A;  1HTY A;  3A98 A;  4AZC A;  1TQS A;  2ALW A;  1TQV A;  3I04 A;  3EJQ A;  2D4C A;  3BVU A;  1OA1 A;  3OHX M;  4AZ6 A;  3EJT A;  4EZV A;  2OW6 A;  4ATM A;  1SUF A;  4HR1 B;  4JLC A;  3D50 A;  5C5B A;  3GI7 A;  4FZP A;  5FIG A;  1U00 A;  4EZN A;  3QNJ A;  4WPC A;  2C08 A;  3SOG A;  2QFF A;  1E9V A;  2QKW A;  3RV1 A;  2ZXQ A;  2Z0O A;  1YWM A;  4NQI A;  1PS3 A;  2YIB A;  1X03 A;  2YL8 A;  3ER8 C;  3OWG A;  3L3O M;  3BUQ A;  4R5J A;  3T49 A;  4AZB A;  2OBM A;  3DPP A;  2F7Q A;  4IM3 A;  4UDY X;  4JL9 A;  4JWI A;  4NSW A;  4R5I A;  4F01 A;  5KBP A;  2F7O A;  1GNT A;  4EZQ A;  4EZZ A;  3FD9 A;  4HY9 A;  1OAO A;  2Q12 A;  2Z8Y A;  3C7N A;  3RV0 A;  2FIC A;  2RT6 A;  1DKY A; 
#chains in the Genus database with same CATH homology
 4B9Q A;  4JWE A;  3I39 X;  3VEB A;  1GNL A;  3A98 A;  4JWC A;  3ER9 B;  3KDR A;  2YI8 A;  3KAW A;  1DKZ A;  2KHO A;  2GA9 D;  2N3K A;  2OBL A;  4M0M A;  4IM0 A;  4D8J A;  3VKH A;  3I04 A;  4PO2 A;  1OA1 A;  3O3M B;  3OHX M;  4EZU A;  3B52 X;  4EZP A;  1DKX A;  3ZED A;  2YIA A;  3O3N B;  4EZV A;  2ND1 A;  4G6Q A;  4FM3 A;  1SUF A;  2LM0 A;  2YI9 A;  4HR1 A;  3O3O B;  4HR1 B;  4JLC A;  3GI7 A;  4EZT A;  3UIT A;  1JQK A;  5FIG A;  3I01 A;  4E3C A;  1W9M A;  4HYB A;  1U00 A;  5FLE X;  4EZN A;  2QXL A;  3QNJ A;  5E84 A;  3T4A G;  4EZY A;  2X5C A;  2QFF A;  1E9V A;  4F00 A;  4EZS A;  3RV1 A;  3KAV A;  3B51 X;  2ND0 A;  1MJG A;  4JWD A;  3QA8 A;  2NCZ A;  1SU6 A;  2YIB A;  4JNE A;  3ER8 C;  3OWG A;  4EZW A;  3L3O M;  3ERC C;  3DPQ A;  2PY6 A;  4H6H A;  4KIK A;  4E81 A;  4JN4 A;  3F7W A;  3LMF A;  3D2E A;  4R5J A;  3T49 A;  4KIK B;  1ZYL A;  4EZR A;  3VEA A;  2EX3 B;  2OBM A;  3DPP A;  3D2F A;  4IM3 A;  4UDY X;  4H6I A;  4JL9 A;  3B53 X;  4IWP A;  4JNF A;  4UDX X;  4JWI A;  4R5I A;  4EZX A;  3T46 A;  2YIV X;  2JNS A;  4F01 A;  2EWF A;  4IM2 A;  1OA0 A;  2GAF D;  4R5K A;  1GNT A;  4EZQ A;  2WIN M;  4EZZ A;  3FD9 A;  3DPO A;  4HY9 A;  4IW0 A;  1OAO A;  1SU7 A;  1SU8 A;  5TKY A;  1GN9 A;  1E1D A;  4EZO A;  2Z8Y A;  1E2U A;  3T48 A;  4NPH A;  4IWQ A;  3C7N A;  1UPX A;  3RV0 A;  2RT6 A;  3T47 A;  1DKY A;  4R5G A;  4R5L A;  4IWO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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