2RT6A

Backbone 1h, 13c, and 15n chemical shift assignments for pric n-terminal domain
Total Genus 32
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
98
structure length
98
Chain Sequence
MKTALLLEKLEGQLATLRQRCAPVSQFATLSARFDRHLFQTRATTLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREW
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Dna binding protein
source organism Escherichia coli
publication title Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.
pubmed doi rcsb
molecule keywords Primosomal replication protein N''
total genus 32
structure length 98
sequence length 98
ec nomenclature
pdb deposition date 2013-04-24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.340 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 2rt6A00
2RT6A
chains in the Genus database with same CATH superfamily
3ZEDA 2F1BA 4IM0A 3RPMA 4I1QA 3LLLA 1DKYA 2FYVA 5TKYA 2Z0OA 4R5GA 4AZ6A 1OA1A 4EZPA 3C7NA 4AVMA 4H8SA 2X3XA 3DYTA 1I4LA 2OW7A 1R34A 4D8JA 3DPQA 1GNLA 4NSWA 2Q13A 3QNIA 3CZSA 2WYIA 3BVWA 3RV0A 2YIVX 4AZHA 1YWMA 3L3PA 4F01A 1HXKA 3O3OB 4R5JA 1GNTA 4AZGA 3T46A 1X03A 2YL6A 4IM3A 5E84A 3KAVA 3CZNA 2PMRA 4H6IA 2WYHA 4IWQA 2RAKA 3B52X 4R5IA 2D1LA 2OBLA 2GF4A 3ACOA 2ND1A 2LXYA 4FZOA 3CAZA 3FD9A 1Y2OA 2NCZA 1O7DB 3VEAA 2F7OA 1OA0A 3DX3A 2Z8YA 1R33A 4JLCA 3HAHA 3BUBA 4R5KA 3T48A 2JNSA 3DDGA 1WDZA 3D51A 2RAIA 4EZOA 3B51X 4EZRA 4JWCA 2Z0VA 3I39X 4JWDA 4NPHA 4AKVA 1HWWA 2YL5A 3BVTA 3BUPA 2EWFA 3I01A 4EZNA 1SU6A 3ER8C 2YKTA 4UDYX 4IW0A 3CKDA 3T49A 4B9QA 4DYLA 1QX1A 3LVTA 3LMFA 2X5CA 4WPEA 2O0I1 2QXLA 1E1DA 1TQWA 3RV1A 1I4TA 4JNEA 1W9MA 3CV5A 1QWNA 4JNFA 4H6HA 3ERCC 3BLBA 3D50A 1DKZA 4AZIA 3EJSA 1ZYLA 3BVUA 4M0MA 3M3WA 3SYVA 1LQ7A 3I04A 3CVRA 2WINM 4EZVA 3BVXA 3VKHA 2F7RA 2OO2A 4EZZA 2X3VA 3G9GA 1X04A 2QFFA 3SOGA 3ABHA 2YIAA 3BUQA 2F1AA 3Q0KA 4E81A 1MJGA 2Z0NA 2ELBA 4KIKB 2X3WA 4IWOA 2V0OA 3EJTA 1R5EA 4HY9A 2N3KA 4AZBA 3T47A 2LM0A 2D4CA 2OW6A 3D52A 3EJRA 1SUFA 1TQVA 4UDXX 2PY6A 1TQUA 4FZSA 2ZXQA 2GAFD 3D4YA 4JWIA 1O7DC 2YLLA 1TQSA 2OZNB 4AZCB 1U00A 2F7QA 2QKWA 3DX4A 3D2EA 3EJPA 4EZYA 3BVVA 5FLEX 3L3OM 1UPXA 3EJQA 3OHXM 5KBPA 4G6QA 3VEBA 4FM3A 3BUDA 4EZSA 4FZPA 1DKXA 4E3CA 1E2UA 4HR1B 3O3NB 3UITA 2EX3B 4PO2A 2EFLA 3DPOA 4JWEA 4BNEA 1HTYA 2YI9A 2RAJA 4R5LA 2YL9A 3DDFA 3QA8A 4KIKA 3GI7A 1URUA 2ALWA 4IM2A 1SU8A 3QNJA 3B53X 4DCNC 2MI7A 2JNKA 3Q84A 1OAOA 4WPCA 5C5BB 4AZCA 2FICA 3KAWA 3OWGA 2YLAA 3BUIA 1GN9A 2GA9D 3HAJA 5FIGA 3HAIA 4HR1A 3A98A 1JQKA 4ATMA 4AZ7A 3D2FA 2F7PA 2YIBA 4EZQA 3DX1A 2EFKA 2KHOA 1I49A 3QE6A 2YL8A 4EZUA 3PLTA 1SU7A 4F00A 1TQTA 3OK8A 2OBMA 3DPPA 3I2WA 4EZTA 1E9VA 4IWPA 3O3MB 2RT6A 4AZ5A 4EZWA 2YI8A 2Q12A 2C08A 3DX2A 3EJUA 3QWEA 3ER9B 4EZXA 5C5BA 3F7WA 3T4AG 4HYBA 3D4ZA 1ZWWA 4JN4A 1QWUA 4NQIA 4JL9A 3DX0A 1PS3A 2ND0A 3KDRA 1I4DA 2F18A
chains in the Genus database with same CATH topology
4EZVA 3B53X 3VKHA 3FD9A 3ZEDA 4EZZA 4IM0A 2QFFA 2NCZA 1OAOA 2YIAA 3VEAA 4E81A 1MJGA 1DKYA 5TKYA 3KAWA 4R5GA 4KIKB 4IWOA 1OA0A 1OA1A 4EZPA 3C7NA 4HY9A 3OWGA 2N3KA 2Z8YA 1GN9A 2GA9D 3T47A 4JLCA 2LM0A 4R5KA 3T48A 5FIGA 2JNSA 1SUFA 4UDXX 4HR1A 2PY6A 3A98A 1JQKA 2GAFD 4EZOA 4D8JA 4JWIA 3D2FA 2YIBA 3DPQA 1GNLA 4EZQA 3B51X 4EZRA 1U00A 4JWCA 3I39X 3D2EA 4EZYA 4JWDA 2KHOA 4NPHA 5FLEX 3RV0A 2YIVX 4EZUA 3L3OM 1SU7A 1UPXA 4F00A 3OHXM 4G6QA 3VEBA 2OBMA 4FM3A 3DPPA 4F01A 2EWFA 4EZTA 4EZSA 3O3OB 3I01A 1DKXA 4R5JA 4E3CA 1E2UA 4EZNA 1E9VA 1SU6A 4HR1B 4IWPA 1GNTA 3O3MB 3ER8C 2RT6A 4EZWA 3O3NB 3UITA 2EX3B 4PO2A 2YI8A 4UDYX 4IW0A 3T46A 3T49A 4B9QA 3DPOA 2X5CA 3LMFA 4JWEA 2QXLA 1E1DA 4IM3A 5E84A 2YI9A 3RV1A 3ER9B 4R5LA 3KAVA 4JNEA 4EZXA 1W9MA 3F7WA 3T4AG 4HYBA 4JNFA 4H6HA 3ERCC 4H6IA 4JN4A 3QA8A 4IWQA 4KIKA 3GI7A 4JL9A 1DKZA 3B52X 1ZYLA 4IM2A 4R5IA 4M0MA 1SU8A 2OBLA 2ND0A 3I04A 3KDRA 3QNJA 2WINM 2ND1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RT6 A; 
#chains in the Genus database with same CATH topology
 3ZED A;  2F1B A;  4IM0 A;  3RPM A;  4I1Q A;  3LLL A;  1DKY A;  2FYV A;  5TKY A;  2Z0O A;  4R5G A;  4AZ6 A;  1OA1 A;  4EZP A;  3C7N A;  4AVM A;  4H8S A;  2X3X A;  3DYT A;  1I4L A;  2OW7 A;  1R34 A;  4D8J A;  3DPQ A;  1GNL A;  4NSW A;  2Q13 A;  3QNI A;  3CZS A;  2WYI A;  3BVW A;  3RV0 A;  2YIV X;  4AZH A;  1YWM A;  3L3P A;  4F01 A;  1HXK A;  3O3O B;  4R5J A;  1GNT A;  4AZG A;  3T46 A;  1X03 A;  2YL6 A;  4IM3 A;  5E84 A;  3KAV A;  3CZN A;  2PMR A;  4H6I A;  2WYH A;  4IWQ A;  2RAK A;  3B52 X;  4R5I A;  2D1L A;  2OBL A;  2GF4 A;  3ACO A;  2ND1 A;  2LXY A;  4FZO A;  3CAZ A;  3FD9 A;  1Y2O A;  2NCZ A;  1O7D B;  3VEA A;  2F7O A;  1OA0 A;  3DX3 A;  2Z8Y A;  1R33 A;  4JLC A;  3HAH A;  3BUB A;  4R5K A;  3T48 A;  2JNS A;  3DDG A;  1WDZ A;  3D51 A;  2RAI A;  4EZO A;  3B51 X;  4EZR A;  4JWC A;  2Z0V A;  3I39 X;  4JWD A;  4NPH A;  4AKV A;  1HWW A;  2YL5 A;  3BVT A;  3BUP A;  2EWF A;  3I01 A;  4EZN A;  1SU6 A;  3ER8 C;  2YKT A;  4UDY X;  4IW0 A;  3CKD A;  3T49 A;  4B9Q A;  4DYL A;  1QX1 A;  3LVT A;  3LMF A;  2X5C A;  4WPE A;  2O0I 1;  2QXL A;  1E1D A;  1TQW A;  3RV1 A;  1I4T A;  4JNE A;  1W9M A;  3CV5 A;  1QWN A;  4JNF A;  4H6H A;  3ERC C;  3BLB A;  3D50 A;  1DKZ A;  4AZI A;  3EJS A;  1ZYL A;  3BVU A;  4M0M A;  3M3W A;  3SYV A;  1LQ7 A;  3I04 A;  3CVR A;  2WIN M;  4EZV A;  3BVX A;  3VKH A;  2F7R A;  2OO2 A;  4EZZ A;  2X3V A;  3G9G A;  1X04 A;  2QFF A;  3SOG A;  3ABH A;  2YIA A;  3BUQ A;  2F1A A;  3Q0K A;  4E81 A;  1MJG A;  2Z0N A;  2ELB A;  4KIK B;  2X3W A;  4IWO A;  2V0O A;  3EJT A;  1R5E A;  4HY9 A;  2N3K A;  4AZB A;  3T47 A;  2LM0 A;  2D4C A;  2OW6 A;  3D52 A;  3EJR A;  1SUF A;  1TQV A;  4UDX X;  2PY6 A;  1TQU A;  4FZS A;  2ZXQ A;  2GAF D;  3D4Y A;  4JWI A;  1O7D C;  2YLL A;  1TQS A;  2OZN B;  4AZC B;  1U00 A;  2F7Q A;  2QKW A;  3DX4 A;  3D2E A;  3EJP A;  4EZY A;  3BVV A;  5FLE X;  3L3O M;  1UPX A;  3EJQ A;  3OHX M;  5KBP A;  4G6Q A;  3VEB A;  4FM3 A;  3BUD A;  4EZS A;  4FZP A;  1DKX A;  4E3C A;  1E2U A;  4HR1 B;  3O3N B;  3UIT A;  2EX3 B;  4PO2 A;  2EFL A;  3DPO A;  4JWE A;  4BNE A;  1HTY A;  2YI9 A;  2RAJ A;  4R5L A;  2YL9 A;  3DDF A;  3QA8 A;  4KIK A;  3GI7 A;  1URU A;  2ALW A;  4IM2 A;  1SU8 A;  3QNJ A;  3B53 X;  4DCN C;  2MI7 A;  2JNK A;  3Q84 A;  1OAO A;  4WPC A;  5C5B B;  4AZC A;  2FIC A;  3KAW A;  3OWG A;  2YLA A;  3BUI A;  1GN9 A;  2GA9 D;  3HAJ A;  5FIG A;  3HAI A;  4HR1 A;  3A98 A;  1JQK A;  4ATM A;  4AZ7 A;  3D2F A;  2F7P A;  2YIB A;  4EZQ A;  3DX1 A;  2EFK A;  2KHO A;  1I49 A;  3QE6 A;  2YL8 A;  4EZU A;  3PLT A;  1SU7 A;  4F00 A;  1TQT A;  3OK8 A;  2OBM A;  3DPP A;  3I2W A;  4EZT A;  1E9V A;  4IWP A;  3O3M B;  2RT6 A;  4AZ5 A;  4EZW A;  2YI8 A;  2Q12 A;  2C08 A;  3DX2 A;  3EJU A;  3QWE A;  3ER9 B;  4EZX A;  5C5B A;  3F7W A;  3T4A G;  4HYB A;  3D4Z A;  1ZWW A;  4JN4 A;  1QWU A;  4NQI A;  4JL9 A;  3DX0 A;  1PS3 A;  2ND0 A;  3KDR A;  1I4D A;  2F18 A; 
#chains in the Genus database with same CATH homology
 4EZV A;  3B53 X;  3VKH A;  3FD9 A;  3ZED A;  4EZZ A;  4IM0 A;  2QFF A;  2NCZ A;  1OAO A;  2YIA A;  3VEA A;  4E81 A;  1MJG A;  1DKY A;  5TKY A;  3KAW A;  4R5G A;  4KIK B;  4IWO A;  1OA0 A;  1OA1 A;  4EZP A;  3C7N A;  4HY9 A;  3OWG A;  2N3K A;  2Z8Y A;  1GN9 A;  2GA9 D;  3T47 A;  4JLC A;  2LM0 A;  4R5K A;  3T48 A;  5FIG A;  2JNS A;  1SUF A;  4UDX X;  4HR1 A;  2PY6 A;  3A98 A;  1JQK A;  2GAF D;  4EZO A;  4D8J A;  4JWI A;  3D2F A;  2YIB A;  3DPQ A;  1GNL A;  4EZQ A;  3B51 X;  4EZR A;  1U00 A;  4JWC A;  3I39 X;  3D2E A;  4EZY A;  4JWD A;  2KHO A;  4NPH A;  5FLE X;  3RV0 A;  2YIV X;  4EZU A;  3L3O M;  1SU7 A;  1UPX A;  4F00 A;  3OHX M;  4G6Q A;  3VEB A;  2OBM A;  4FM3 A;  3DPP A;  4F01 A;  2EWF A;  4EZT A;  4EZS A;  3O3O B;  3I01 A;  1DKX A;  4R5J A;  4E3C A;  1E2U A;  4EZN A;  1E9V A;  1SU6 A;  4HR1 B;  4IWP A;  1GNT A;  3O3M B;  3ER8 C;  2RT6 A;  4EZW A;  3O3N B;  3UIT A;  2EX3 B;  4PO2 A;  2YI8 A;  4UDY X;  4IW0 A;  3T46 A;  3T49 A;  4B9Q A;  3DPO A;  2X5C A;  3LMF A;  4JWE A;  2QXL A;  1E1D A;  4IM3 A;  5E84 A;  2YI9 A;  3RV1 A;  3ER9 B;  4R5L A;  3KAV A;  4JNE A;  4EZX A;  1W9M A;  3F7W A;  3T4A G;  4HYB A;  4JNF A;  4H6H A;  3ERC C;  4H6I A;  4JN4 A;  3QA8 A;  4IWQ A;  4KIK A;  3GI7 A;  4JL9 A;  1DKZ A;  3B52 X;  1ZYL A;  4IM2 A;  4R5I A;  4M0M A;  1SU8 A;  2OBL A;  2ND0 A;  3I04 A;  3KDR A;  3QNJ A;  2WIN M;  2ND1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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