2V06A

Crystal structure of the ppm ser-thr phosphatase mspp from mycobacterium smegmatis at ph 5.5
Total Genus 70
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
70
sequence length
234
structure length
234
Chain Sequence
GMASVLSAATATDQGPVRENNQDACLADGILYAVADGFGARGHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords SER-THR PHOSPHATASE MSPP
publication title Structural and Binding Studies of the Three-Metal Center in Two Mycobacterial Ppm Ser/Thr Protein Phosphatases.
pubmed doi rcsb
source organism Mycobacterium smegmatis
total genus 70
structure length 234
sequence length 234
ec nomenclature ec 3.1.3.-:
pdb deposition date 2007-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13672 PP2C_2 Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 2v06A00
3UJKA 3W43A 3W44A 2POPA 2XZVA 4LGAB 3FXMA 4JNDA 4DA1A 3KDJB 3ZVUB 4LA7B 2Y09A 2J82A 2P8EA 2CM1A 3RNRA 2I0OA 4LGBB 3W40A 3W41A 1A6QA 3MQ3A 5F1MA 3NMVB 3PU9A 3NMTB 2IRMA 3T9QA 4RAFA 3RT0A 4RAGA 3QN1B 3NMNB 4LG5B 2JFSA 3FXLA 3JRQA 3FXOA 2V06A 4N0GA 4YZHA 4YZGA 2PNQA 4WVOB 2I44A 3FXJA 3KE6A 5JO1B 2J86A 3ZT9A 3UJGB 2POMA 3ES2A 3KB3B 3UJLB 3T91A 3EQ2A 2ISNA 2J4OA 3F79A 3D8KA 4DS8B 4RA2A 3W42A 2IQ1A 5ITIA 2PK0A 3N3CA 1TXOA 3W45A 4OICB 2JFRA 5D2UA 5JO2B 3FXKA 2JFTA
chains in the Genus database with same CATH superfamily
3UJKA 3W43A 3W44A 2POPA 2XZVA 4LGAB 3FXMA 4JNDA 4DA1A 3KDJB 3ZVUB 4LA7B 2Y09A 2J82A 4IIKA 2P8EA 2CM1A 3RNRA 2I0OA 4LGBB 3W40A 3W41A 1A6QA 3MQ3A 5F1MA 3NMVB 3PU9A 3NMTB 4IIPA 2IRMA 3T9QA 4RAFA 3RT0A 4RAGA 3QN1B 3NMNB 4LG5B 2JFSA 3FXLA 3JRQA 3FXOA 2V06A 4N0GA 4YZHA 4YZGA 2PNQA 4WVOB 2I44A 3FXJA 3KE6A 5JO1B 2J86A 3ZT9A 3UJGB 2POMA 3ES2A 3KB3B 3UJLB 3T91A 3EQ2A 2ISNA 2J4OA 3F79A 3D8KA 4DS8B 4RA2A 3W42A 2IQ1A 5ITIA 2PK0A 3N3CA 1TXOA 3W45A 4OICB 2JFRA 5D2UA 5JO2B 3FXKA 2JFTA
chains in the Genus database with same CATH topology
3UJKA 3W43A 3W44A 2POPA 2XZVA 4LGAB 3FXMA 4JNDA 4DA1A 3KDJB 3ZVUB 4LA7B 2Y09A 2J82A 2P8EA 2CM1A 3RNRA 2I0OA 4LGBB 3W40A 3W41A 1A6QA 3MQ3A 5F1MA 3NMVB 3PU9A 3NMTB 2IRMA 3T9QA 4RAFA 3RT0A 4RAGA 3QN1B 3NMNB 4LG5B 2JFSA 3FXLA 3JRQA 3FXOA 2V06A 4N0GA 4YZHA 4YZGA 2PNQA 4WVOB 2I44A 3FXJA 3KE6A 5JO1B 2J86A 3ZT9A 3UJGB 2POMA 3ES2A 3KB3B 3UJLB 3T91A 3EQ2A 2ISNA 2J4OA 3F79A 3D8KA 4DS8B 4RA2A 3W42A 2IQ1A 5ITIA 2PK0A 3N3CA 1TXOA 3W45A 4OICB 2JFRA 5D2UA 5JO2B 3FXKA 2JFTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3UJK A;  3W43 A;  3W44 A;  2POP A;  2XZV A;  4LGA B;  3FXM A;  4JND A;  4DA1 A;  3KDJ B;  3ZVU B;  4LA7 B;  2Y09 A;  2J82 A;  2P8E A;  2CM1 A;  3RNR A;  2I0O A;  4LGB B;  3W40 A;  3W41 A;  1A6Q A;  3MQ3 A;  5F1M A;  3NMV B;  3PU9 A;  3NMT B;  2IRM A;  3T9Q A;  4RAF A;  3RT0 A;  4RAG A;  3QN1 B;  3NMN B;  4LG5 B;  2JFS A;  3FXL A;  3JRQ A;  3FXO A;  2V06 A;  4N0G A;  4YZH A;  4YZG A;  2PNQ A;  4WVO B;  2I44 A;  3FXJ A;  3KE6 A;  5JO1 B;  2J86 A;  3ZT9 A;  3UJG B;  2POM A;  3ES2 A;  3KB3 B;  3UJL B;  3T91 A;  3EQ2 A;  2ISN A;  2J4O A;  3F79 A;  3D8K A;  4DS8 B;  4RA2 A;  3W42 A;  2IQ1 A;  5ITI A;  2PK0 A;  3N3C A;  1TXO A;  3W45 A;  4OIC B;  2JFR A;  5D2U A;  5JO2 B;  3FXK A;  2JFT A; 
#chains in the Genus database with same CATH topology
 3UJK A;  3W43 A;  3W44 A;  2POP A;  2XZV A;  4LGA B;  3FXM A;  4JND A;  4DA1 A;  3KDJ B;  3ZVU B;  4LA7 B;  2Y09 A;  2J82 A;  4IIK A;  2P8E A;  2CM1 A;  3RNR A;  2I0O A;  4LGB B;  3W40 A;  3W41 A;  1A6Q A;  3MQ3 A;  5F1M A;  3NMV B;  3PU9 A;  3NMT B;  4IIP A;  2IRM A;  3T9Q A;  4RAF A;  3RT0 A;  4RAG A;  3QN1 B;  3NMN B;  4LG5 B;  2JFS A;  3FXL A;  3JRQ A;  3FXO A;  2V06 A;  4N0G A;  4YZH A;  4YZG A;  2PNQ A;  4WVO B;  2I44 A;  3FXJ A;  3KE6 A;  5JO1 B;  2J86 A;  3ZT9 A;  3UJG B;  2POM A;  3ES2 A;  3KB3 B;  3UJL B;  3T91 A;  3EQ2 A;  2ISN A;  2J4O A;  3F79 A;  3D8K A;  4DS8 B;  4RA2 A;  3W42 A;  2IQ1 A;  5ITI A;  2PK0 A;  3N3C A;  1TXO A;  3W45 A;  4OIC B;  2JFR A;  5D2U A;  5JO2 B;  3FXK A;  2JFT A; 
#chains in the Genus database with same CATH homology
 3UJK A;  3W43 A;  3W44 A;  2POP A;  2XZV A;  4LGA B;  3FXM A;  4JND A;  4DA1 A;  3KDJ B;  3ZVU B;  4LA7 B;  2Y09 A;  2J82 A;  2P8E A;  2CM1 A;  3RNR A;  2I0O A;  4LGB B;  3W40 A;  3W41 A;  1A6Q A;  3MQ3 A;  5F1M A;  3NMV B;  3PU9 A;  3NMT B;  2IRM A;  3T9Q A;  4RAF A;  3RT0 A;  4RAG A;  3QN1 B;  3NMN B;  4LG5 B;  2JFS A;  3FXL A;  3JRQ A;  3FXO A;  2V06 A;  4N0G A;  4YZH A;  4YZG A;  2PNQ A;  4WVO B;  2I44 A;  3FXJ A;  3KE6 A;  5JO1 B;  2J86 A;  3ZT9 A;  3UJG B;  2POM A;  3ES2 A;  3KB3 B;  3UJL B;  3T91 A;  3EQ2 A;  2ISN A;  2J4O A;  3F79 A;  3D8K A;  4DS8 B;  4RA2 A;  3W42 A;  2IQ1 A;  5ITI A;  2PK0 A;  3N3C A;  1TXO A;  3W45 A;  4OIC B;  2JFR A;  5D2U A;  5JO2 B;  3FXK A;  2JFT A; 
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