2V0FA

Brk domain from human chd7
Total Genus 14
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
14
sequence length
87
structure length
87
Chain Sequence
GSRNPNKLDINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVVRGEGAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 7
publication title Solution Structure of the Brk Domains from Chd7
pubmed doi rcsb
source organism Homo sapiens
total genus 14
structure length 87
sequence length 87
ec nomenclature ec 3.6.4.12: DNA helicase.
pdb deposition date 2007-05-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07533 BRK BRK domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.28.130 Mainly Beta Single Sheet Rubrerythrin, domain 2 Rubrerythrin, domain 2 2v0fA01
2CKAA 2V0FA 2CKCA 2V0EA
chains in the Genus database with same CATH superfamily
3QQCE 4A3JL 1T9QA 4V196 4GS7D 2BE5D 5RXNA 4XGHA 5DM71 3LNLA 4A3CL 2AUSB 3MSUA 3M3YL 2J9UB 4YWMA 2O5JD 3ZG6A 1B71A 5MLC3 4WFN1 1SMUA 8RXNA 5MGNA 4QIWP 1IRNA 2R92L 1PFYA 5EIOC 4RXNA 3H97A 5IP7L 2JA5L 1NXEA 1T9PA 2PVEA 1NXGA 3HOVL 1T9OA 3PKJA 4U671 2RFKB 1YUZA 3KYXA 1F4LA 2C6BA 2HVYC 3LPEB 3S2HL 3PIP1 4JAEA 2A6ED 1Z92B 5JVG1 2CR8A 4XXBB 1PFVA 5EINC 3P2AA 3RZOL 1SMWA 5AN9H 3H0GL 1YV1A 1YK4A 3PO3L 1E8JA 4G6BA 1R0HA 3HKZP 1R0JA 2Y0SP 4C3IL 2JA7L 1IW7D 1YK5A 2ERJA 5GADc 3RZTA 3GTGL 3S1ML 1DVBA 1BQ9A 3VPBE 2A68D 3WWNB 5C3EL 2ERSA 4JAFA 3K35A 4AHYA 3FDJA 3S14L 3P8BA 3PIO1 3WWLA 3B08B 5K2ME 3PWFA 2K2DA 4C3HL 3LWPB 5M3ML 3S1QL 3JR7A 3LWRB 3PKIA 4LHNA 3NFPI 1VZHA 2HR5A 2Z3QB 4A3LL 1CADA 2APOB 2JI2A 3I4ML 4BBSL 2VL6A 3S1NL 1FHHA 2XJVA 5GAEc 1ZRPA 4TVMA 2NVTL 2JA6L 4AI1A 2RDVA 3HJWB 4AR3A 3H9BA 3SS2A 4E6YA 1B13A 5C44L 1B2OA 4AR6A 4AYBP 1DX8A 3HOZL 1TWGL 1TWAL 3S2DL 1R0IA 3IU3I 5H1Sc 1OWCA 5IYBL 1IROA 1BE7A 4Y52L 5JVH1 4A3BL 4TPUA 6RXNA 3RZDL 5M5YL 2A6HD 4AR4A 4B8CD 4BY7L 3PO2L 5M5WL 1TWFL 4POFA 1JYBA 1QQTA 2E2HL 4A3KL 5IYCL 3H9CA 4ZN3B 1C09A 4ZN1B 5AI2A 1OWBA 2GMGA 4K9FA 4BY1L 3K7AL 4X6AL 3H99A 2R7ZL 1QCVA 1R9TL 2NYDA 3PL5A 3PZAA 2V0EA 2H12A 4AHXA 1ODHA 3S1RL 4C2M1 2LCQA 1BFYA 1IU5A 4A93L 3S17L 2XJTA 5GAGc 1S2ZA 2C6AA 2PVXA 4YWLA 5M5XL 2XJQA 1WCML 3H3VM 2MS3A 1BRFA 4AI2A 2VUML 3RZ6A 2PPTA 3GTLL 3GTPL 2XJUA 3CQZL 2JA8L 2AYJA 1LTLA 2AQCA 2E2IL 4AHZA 1LKOA 1K83L 3J7Z1 1I6HL 1Y1WL 1Y1VL 2YU9L 1BQ8A 4LHLA 3KYUA 2V3BB 2E2JL 4AHWA 3GTQL 2NVYL 1R0FA 4AI0A 1TWCL 1QYBA 2QL0A 1YUXA 3HOYL 5MF6A 2PYAA 1LKMA 2XJPA 3MQKB 2PMZP 2CKAA 4A3FL 2PSMC 2R93L 3FKIL 5MFPA 5C4XL 3J7Y1 3GTOL 2M4YA 3HOXL 3GTML 1RDVA 5AI3A 4POGA 1RDGA 1I3QL 2B63L 1PFUA 2DSXA 2B5ID 5IP9L 2ZIXA 1NNQA 5IY0A 3GTJL 5DM61 2M6PA 4A3EL 4UY81 1LKPA 3QVDA 1S30A 2NVXL 1H7VA 1RWDA 3RYGA 1S24A 5GAHc 4A3ML 1TWHL 1IU6A 2Z3RB 3LWVB 2KKDA 4C3JL 5M3FL 4A3DL 1CAAA 4ME3A 1SFOL 1RB9A 4A3IL 3S15L 3HOWL 2WAQP 4BXXL 2EY4E 1VZGA 5FLML 4BBRL 1VZIA 1B2JA 1P7PA 4AI3A 3A44A 3M4OL 1WJVA 1R0GA 2JI3A 5FJ8L 1I50L 5C4JL 4JAGA 3HAXC 3KYVA 3B0AB 7RXNA 3LWQB 1FHMA 1SMMA 2WB1P 1RYQA 1RYTA 2A69D 4AR5A 1VCXA 4Y7NL 3KYWA 2L0ZA 3I4NL 5MFZA 3S16L 2M6OA 4JADA 3HJYB 3GTKL 2XJSA 5IYDL 3KYYA 2NVQL 2JI1A 3MPSA 2KN9A 2V0FA 2CKCA 3HOUL 2M4VA 4A3GL 1PFWA 3LWOB 1PZXA 2XJRA
chains in the Genus database with same CATH topology
3WWLA 2LCQA 3B08B 5K2ME 4POGA 1RDGA 1BFYA 3PWFA 1IU5A 3QQCE 2DSXA 2B5ID 1T9QA 2XJTA 2ZIXA 5GAGc 4V196 1S2ZA 4GS7D 2C6AA 2BE5D 1NNQA 5RXNA 2PVXA 4XGHA 4YWLA 2K2DA 2XJQA 3LNLA 5IY0A 5DM71 3MSUA 5DM61 3PKIA 2M6PA 4LHNA 3NFPI 1VZHA 4UY81 2HR5A 2J9UB 2Z3QB 4YWMA 1LKPA 3QVDA 1S30A 2MS3A 1BRFA 1CADA 2JI2A 2O5JD 1H7VA 3ZG6A 1B71A 2VL6A 4AI2A 1RWDA 3RYGA 1FHHA 1S24A 2XJVA 5GAHc 5GAEc 1IU6A 1ZRPA 2Z3RB 4TVMA 3RZ6A 1SMUA 5MLC3 8RXNA 2KKDA 2PPTA 4AI1A 4WFN1 2XJUA 2RDVA 2AYJA 5MGNA 4AR3A 1IRNA 1LTLA 3SS2A 4E6YA 5EIOC 1CAAA 4RXNA 4AHZA 4ME3A 1LKOA 1B13A 3J7Z1 1B2OA 1RB9A 4AR6A 1DX8A 1NXEA 1T9PA 2PVEA 3IU3I 1R0IA 1NXGA 5H1Sc 1BQ8A 1T9OA 3KYUA 3PKJA 4LHLA 1VZGA 1YUZA 4U671 2V3BB 1OWCA 3KYXA 1IROA 1BE7A 2C6BA 1VZIA 4AHWA 5JVH1 3LPEB 1B2JA 4AI3A 3A44A 4TPUA 6RXNA 1WJVA 1R0GA 2JI3A 3PIP1 4JAGA 4JAEA 2A6ED 1R0FA 1Z92B 4AI0A 2A6HD 3KYVA 4AR4A 1QYBA 2CR8A 1YUXA 2QL0A 4B8CD 3B0AB 5JVG1 5MF6A 4POFA 1JYBA 4XXBB 7RXNA 2PYAA 1FHMA 1LKMA 1SMMA 5EINC 2XJPA 3P2AA 1SMWA 5AN9H 1RYQA 2A69D 1RYTA 1YV1A 1YK4A 1VCXA 4AR5A 4ZN3B 1C09A 3KYWA 2L0ZA 1E8JA 5MFZA 4ZN1B 5AI2A 2M6OA 1OWBA 2GMGA 4K9FA 4G6BA 4JADA 1R0HA 2XJSA 2CKAA 3KYYA 1R0JA 2PSMC 1QCVA 1IW7D 1YK5A 2ERJA 2JI1A 3MPSA 5GADc 3RZTA 5MFPA 3J7Y1 1DVBA 2KN9A 2NYDA 2V0FA 1BQ9A 2M4YA 3VPBE 2CKCA 2A68D 3PZAA 3WWNB 2V0EA 2M4VA 2ERSA 2H12A 1RDVA 4AHXA 5AI3A 4JAFA 3K35A 1ODHA 4AHYA 2XJRA 3P8BA 3PIO1
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CKA A;  2V0F A;  2CKC A;  2V0E A; 
#chains in the Genus database with same CATH topology
 3QQC E;  4A3J L;  1T9Q A;  4V19 6;  4GS7 D;  2BE5 D;  5RXN A;  4XGH A;  5DM7 1;  3LNL A;  4A3C L;  2AUS B;  3MSU A;  3M3Y L;  2J9U B;  4YWM A;  2O5J D;  3ZG6 A;  1B71 A;  5MLC 3;  4WFN 1;  1SMU A;  8RXN A;  5MGN A;  4QIW P;  1IRN A;  2R92 L;  1PFY A;  5EIO C;  4RXN A;  3H97 A;  5IP7 L;  2JA5 L;  1NXE A;  1T9P A;  2PVE A;  1NXG A;  3HOV L;  1T9O A;  3PKJ A;  4U67 1;  2RFK B;  1YUZ A;  3KYX A;  1F4L A;  2C6B A;  2HVY C;  3LPE B;  3S2H L;  3PIP 1;  4JAE A;  2A6E D;  1Z92 B;  5JVG 1;  2CR8 A;  4XXB B;  1PFV A;  5EIN C;  3P2A A;  3RZO L;  1SMW A;  5AN9 H;  3H0G L;  1YV1 A;  1YK4 A;  3PO3 L;  1E8J A;  4G6B A;  1R0H A;  3HKZ P;  1R0J A;  2Y0S P;  4C3I L;  2JA7 L;  1IW7 D;  1YK5 A;  2ERJ A;  5GAD c;  3RZT A;  3GTG L;  3S1M L;  1DVB A;  1BQ9 A;  3VPB E;  2A68 D;  3WWN B;  5C3E L;  2ERS A;  4JAF A;  3K35 A;  4AHY A;  3FDJ A;  3S14 L;  3P8B A;  3PIO 1;  3WWL A;  3B08 B;  5K2M E;  3PWF A;  2K2D A;  4C3H L;  3LWP B;  5M3M L;  3S1Q L;  3JR7 A;  3LWR B;  3PKI A;  4LHN A;  3NFP I;  1VZH A;  2HR5 A;  2Z3Q B;  4A3L L;  1CAD A;  2APO B;  2JI2 A;  3I4M L;  4BBS L;  2VL6 A;  3S1N L;  1FHH A;  2XJV A;  5GAE c;  1ZRP A;  4TVM A;  2NVT L;  2JA6 L;  4AI1 A;  2RDV A;  3HJW B;  4AR3 A;  3H9B A;  3SS2 A;  4E6Y A;  1B13 A;  5C44 L;  1B2O A;  4AR6 A;  4AYB P;  1DX8 A;  3HOZ L;  1TWG L;  1TWA L;  3S2D L;  1R0I A;  3IU3 I;  5H1S c;  1OWC A;  5IYB L;  1IRO A;  1BE7 A;  4Y52 L;  5JVH 1;  4A3B L;  4TPU A;  6RXN A;  3RZD L;  5M5Y L;  2A6H D;  4AR4 A;  4B8C D;  4BY7 L;  3PO2 L;  5M5W L;  1TWF L;  4POF A;  1JYB A;  1QQT A;  2E2H L;  4A3K L;  5IYC L;  3H9C A;  4ZN3 B;  1C09 A;  4ZN1 B;  5AI2 A;  1OWB A;  2GMG A;  4K9F A;  4BY1 L;  3K7A L;  4X6A L;  3H99 A;  2R7Z L;  1QCV A;  1R9T L;  2NYD A;  3PL5 A;  3PZA A;  2V0E A;  2H12 A;  4AHX A;  1ODH A;  3S1R L;  4C2M 1;  2LCQ A;  1BFY A;  1IU5 A;  4A93 L;  3S17 L;  2XJT A;  5GAG c;  1S2Z A;  2C6A A;  2PVX A;  4YWL A;  5M5X L;  2XJQ A;  1WCM L;  3H3V M;  2MS3 A;  1BRF A;  4AI2 A;  2VUM L;  3RZ6 A;  2PPT A;  3GTL L;  3GTP L;  2XJU A;  3CQZ L;  2JA8 L;  2AYJ A;  1LTL A;  2AQC A;  2E2I L;  4AHZ A;  1LKO A;  1K83 L;  3J7Z 1;  1I6H L;  1Y1W L;  1Y1V L;  2YU9 L;  1BQ8 A;  4LHL A;  3KYU A;  2V3B B;  2E2J L;  4AHW A;  3GTQ L;  2NVY L;  1R0F A;  4AI0 A;  1TWC L;  1QYB A;  2QL0 A;  1YUX A;  3HOY L;  5MF6 A;  2PYA A;  1LKM A;  2XJP A;  3MQK B;  2PMZ P;  2CKA A;  4A3F L;  2PSM C;  2R93 L;  3FKI L;  5MFP A;  5C4X L;  3J7Y 1;  3GTO L;  2M4Y A;  3HOX L;  3GTM L;  1RDV A;  5AI3 A;  4POG A;  1RDG A;  1I3Q L;  2B63 L;  1PFU A;  2DSX A;  2B5I D;  5IP9 L;  2ZIX A;  1NNQ A;  5IY0 A;  3GTJ L;  5DM6 1;  2M6P A;  4A3E L;  4UY8 1;  1LKP A;  3QVD A;  1S30 A;  2NVX L;  1H7V A;  1RWD A;  3RYG A;  1S24 A;  5GAH c;  4A3M L;  1TWH L;  1IU6 A;  2Z3R B;  3LWV B;  2KKD A;  4C3J L;  5M3F L;  4A3D L;  1CAA A;  4ME3 A;  1SFO L;  1RB9 A;  4A3I L;  3S15 L;  3HOW L;  2WAQ P;  4BXX L;  2EY4 E;  1VZG A;  5FLM L;  4BBR L;  1VZI A;  1B2J A;  1P7P A;  4AI3 A;  3A44 A;  3M4O L;  1WJV A;  1R0G A;  2JI3 A;  5FJ8 L;  1I50 L;  5C4J L;  4JAG A;  3HAX C;  3KYV A;  3B0A B;  7RXN A;  3LWQ B;  1FHM A;  1SMM A;  2WB1 P;  1RYQ A;  1RYT A;  2A69 D;  4AR5 A;  1VCX A;  4Y7N L;  3KYW A;  2L0Z A;  3I4N L;  5MFZ A;  3S16 L;  2M6O A;  4JAD A;  3HJY B;  3GTK L;  2XJS A;  5IYD L;  3KYY A;  2NVQ L;  2JI1 A;  3MPS A;  2KN9 A;  2V0F A;  2CKC A;  3HOU L;  2M4V A;  4A3G L;  1PFW A;  3LWO B;  1PZX A;  2XJR A; 
#chains in the Genus database with same CATH homology
 3WWL A;  2LCQ A;  3B08 B;  5K2M E;  4POG A;  1RDG A;  1BFY A;  3PWF A;  1IU5 A;  3QQC E;  2DSX A;  2B5I D;  1T9Q A;  2XJT A;  2ZIX A;  5GAG c;  4V19 6;  1S2Z A;  4GS7 D;  2C6A A;  2BE5 D;  1NNQ A;  5RXN A;  2PVX A;  4XGH A;  4YWL A;  2K2D A;  2XJQ A;  3LNL A;  5IY0 A;  5DM7 1;  3MSU A;  5DM6 1;  3PKI A;  2M6P A;  4LHN A;  3NFP I;  1VZH A;  4UY8 1;  2HR5 A;  2J9U B;  2Z3Q B;  4YWM A;  1LKP A;  3QVD A;  1S30 A;  2MS3 A;  1BRF A;  1CAD A;  2JI2 A;  2O5J D;  1H7V A;  3ZG6 A;  1B71 A;  2VL6 A;  4AI2 A;  1RWD A;  3RYG A;  1FHH A;  1S24 A;  2XJV A;  5GAH c;  5GAE c;  1IU6 A;  1ZRP A;  2Z3R B;  4TVM A;  3RZ6 A;  1SMU A;  5MLC 3;  8RXN A;  2KKD A;  2PPT A;  4AI1 A;  4WFN 1;  2XJU A;  2RDV A;  2AYJ A;  5MGN A;  4AR3 A;  1IRN A;  1LTL A;  3SS2 A;  4E6Y A;  5EIO C;  1CAA A;  4RXN A;  4AHZ A;  4ME3 A;  1LKO A;  1B13 A;  3J7Z 1;  1B2O A;  1RB9 A;  4AR6 A;  1DX8 A;  1NXE A;  1T9P A;  2PVE A;  3IU3 I;  1R0I A;  1NXG A;  5H1S c;  1BQ8 A;  1T9O A;  3KYU A;  3PKJ A;  4LHL A;  1VZG A;  1YUZ A;  4U67 1;  2V3B B;  1OWC A;  3KYX A;  1IRO A;  1BE7 A;  2C6B A;  1VZI A;  4AHW A;  5JVH 1;  3LPE B;  1B2J A;  4AI3 A;  3A44 A;  4TPU A;  6RXN A;  1WJV A;  1R0G A;  2JI3 A;  3PIP 1;  4JAG A;  4JAE A;  2A6E D;  1R0F A;  1Z92 B;  4AI0 A;  2A6H D;  3KYV A;  4AR4 A;  1QYB A;  2CR8 A;  1YUX A;  2QL0 A;  4B8C D;  3B0A B;  5JVG 1;  5MF6 A;  4POF A;  1JYB A;  4XXB B;  7RXN A;  2PYA A;  1FHM A;  1LKM A;  1SMM A;  5EIN C;  2XJP A;  3P2A A;  1SMW A;  5AN9 H;  1RYQ A;  2A69 D;  1RYT A;  1YV1 A;  1YK4 A;  1VCX A;  4AR5 A;  4ZN3 B;  1C09 A;  3KYW A;  2L0Z A;  1E8J A;  5MFZ A;  4ZN1 B;  5AI2 A;  2M6O A;  1OWB A;  2GMG A;  4K9F A;  4G6B A;  4JAD A;  1R0H A;  2XJS A;  2CKA A;  3KYY A;  1R0J A;  2PSM C;  1QCV A;  1IW7 D;  1YK5 A;  2ERJ A;  2JI1 A;  3MPS A;  5GAD c;  3RZT A;  5MFP A;  3J7Y 1;  1DVB A;  2KN9 A;  2NYD A;  2V0F A;  1BQ9 A;  2M4Y A;  3VPB E;  2CKC A;  2A68 D;  3PZA A;  3WWN B;  2V0E A;  2M4V A;  2ERS A;  2H12 A;  1RDV A;  4AHX A;  5AI3 A;  4JAF A;  3K35 A;  1ODH A;  4AHY A;  2XJR A;  3P8B A;  3PIO 1; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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