2W0TA

Solution structure of the fcs zinc finger domain of human lmbl2
Total Genus 4
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
43
structure length
43
Chain Sequence
b'GSGSEPAVCEMCGIVGTREAFFSKTKRFCSVSCSRSYSSNSKK'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Solution Structure of the Fcs Zinc Finger Domain of the Human Polycomb Group Protein L(3)Mbt-Like 2.
pubmed doi rcsb
molecule keywords LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN
source organism Homo sapiens
molecule tags Transcription
total genus 4
structure length 43
sequence length 43
ec nomenclature
pdb deposition date 2008-10-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.160 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2w0tA00
2L8EA 2W0TA
chains in the Genus database with same CATH superfamily
2QQCA 1FARA 1HPTA 1SGYI 1U5KA 1WGTA 2J87A 2KMQA 2NU3I 2UVOA 1WKXA 1SGNI 1TBNA 2XRCA 3UOEA 2GKTI 3UGDA 4FKDA 2SGFI 1TIHA 1W3SA 1M8CA 5EX0A 2VRWB 3OXGA 1Y1CA 5FUXA 5FUYA 1CE3A 2GVIA 2B0UC 1R0RI 1NUBA 1CSOI 3CXLA 1PPFI 2QQ0A 3D00A 2N1AB 1FAQA 1CGJI 5E3RA 1PTRA 1TBRR 1HEVA 1CT2I 2RIJA 1UUCA 2WCYA 3VE5A 1IY6A 4E1RA 2NU4I 2OD1A 1Y8FA 4GI3C 3QTLD 4WP4A 1MJAA 1XA6A 3MEKA 2WVJA 5EX3A 3FC3A 2E5RA 1DS2I 3R5BA 1WTJA 5E3QA 3UFFA 5J8CA 3OVOA 2DIPA 1TURA 2YUUA 2NU1I 1SGQI 5FUWA 2BUSA 2YQPA 1CT0I 2ORVA 3R5AA 1YU6C 1UHAA 3GOXA 1KMAA 4OVOA 4SGBI 1BUSA 2LB7A 1R79A 2KMPA 1M8BA 1Z2IA 2L8EA 4UXJA 2N17A 1NXUA 1K7TA 5FUVA 2ELIA 2SGDI 1DS3I 3PDNA 1PCEA 1S20A 1V1HA 2X52A 1OYVI 1PTQA 2LEOA 2SGQI 2J9RA 3BJIA 3SEKC 5J8FA 5HI7A 4B6DA 2OU2A 2DKVA 5E3PA 2CJSC 1CHOI 3R5CA 1Z7KB 2QQDA 4DNCA 2UZ3A 1TBOA 2PQ8A 3TJQA 2Y0MA 1LR9A 3B4VC 3E59A 1KBFA 2CWFA 1N13A 2KCXA 3UEYA 2NU0I 1WGCA 3HH2C 2ENZA 1H0ZA 2ORWA 1P9ZA 3VDPA 1CGII 7WGAA 1XBTA 2ODDA 1SGRI 1K7UA 1X4SA 1MJ9A 2WGCA 3SGBI 3TOBA 9WGAA 2B8TA 1SGPI 3OXFA 4L9MA 1TGSI 1P9GA 1HDLA 1TOTA 1K7VA 2ARPF 2JW6A 3OL0A 1LR7A 3QAHA 1AN1I 3UGIA 5HQ8A 3UEJA 1CT4I 3FSXA 2N52A 1FYBA 2GIVA 2F3CI 1FY7A 2JA1A 1V1IA 1RFHA 2OZUA 3TO6A 1OVOA 1UVGA 1VDDA 2JZMA 2CWHA 2QQEA 3QWPA 4E1PA 2ENNA 3RU0A 3E2IA 1SGDI 2V53A 1UVFA 1TBQR 1W4RA 1OMUA 1BMOA 2LUYA 4HGUA 2L7XA 2RC4A 3KY9A 2K9HA 2JXDA 5DAEA 1MJBA 1PJUA 4JCVE 1ULNA 3OXLA 3R5DA 3TO7A 2M5XA 2W0TA 2GKVA 1Y1BA 1Q9BA 5CCLA 3SGQI 1LR8A 3UGLA 1YTPA 2KMOA 2CWGA 2JYYA 1TUSA 2A20A 2GKRI 2N71A 2X3TA 2ROWA 2DB6A 2SGEI 2P6AC 2V1CA 2V1CC 2FNFX 2SGPI 4UXHA 1KBEA 1SGEI 1X74A 3VDUA 5JHWC 2ERWA 2NU2I 4MPIA 4AMLA 1IW4A 3FSYA 1HJAI 2OVOA 4A24A 2KMRA 1ULKA 1OMTA 2QPOA 2E73A 1IY5A 3TO9A 1MT1A 4UXIA 1ULMA 3TOAA 1XX6A 5CCMA
chains in the Genus database with same CATH topology
2QQCA 1FARA 1HPTA 1SGYI 1U5KA 2J87A 2KMQA 2NU3I 1SGNI 1TBNA 2XRCA 2GKTI 3UGDA 4FKDA 2SGFI 1TIHA 1W3SA 1M8CA 5EX0A 2VRWB 3OXGA 1Y1CA 5FUXA 5FUYA 1CE3A 2GVIA 2B0UC 1R0RI 1NUBA 1CSOI 3CXLA 1PPFI 2QQ0A 3D00A 2N1AB 1FAQA 1CGJI 1PTRA 1TBRR 1CT2I 1UUCA 2WCYA 3VE5A 1IY6A 4E1RA 2NU4I 2OD1A 1Y8FA 4GI3C 3QTLD 1XA6A 3MEKA 5EX3A 2WVJA 3FC3A 2E5RA 1DS2I 3UFFA 3OVOA 2DIPA 1TURA 2YUUA 2NU1I 1SGQI 5FUWA 2BUSA 2YQPA 1CT0I 2ORVA 1YU6C 3GOXA 1KMAA 4OVOA 4SGBI 1BUSA 1R79A 2KMPA 1M8BA 2L8EA 4UXJA 2N17A 5FUVA 2ELIA 2SGDI 1DS3I 3PDNA 1PCEA 1V1HA 1OYVI 1PTQA 2LEOA 2SGQI 2J9RA 3BJIA 3SEKC 5HI7A 4B6DA 2CJSC 1CHOI 1Z7KB 2QQDA 2UZ3A 1TBOA 3TJQA 3B4VC 1LR9A 3E59A 1KBFA 1N13A 2KCXA 3UEYA 2NU0I 3HH2C 2ENZA 1H0ZA 2ORWA 3VDPA 1CGII 1XBTA 2ODDA 1SGRI 1X4SA 3SGBI 2B8TA 1SGPI 3OXFA 4L9MA 1TGSI 1HDLA 1TOTA 2ARPF 2JW6A 3UGIA 3OL0A 1LR7A 5HQ8A 1AN1I 3UEJA 1CT4I 2N52A 1FYBA 2F3CI 2JA1A 1V1IA 1RFHA 1OVOA 1VDDA 1UVGA 2JZMA 2QQEA 3QWPA 4E1PA 2ENNA 3RU0A 3E2IA 1SGDI 2V53A 1UVFA 1TBQR 1W4RA 1OMUA 1BMOA 2LUYA 4HGUA 2L7XA 3KY9A 2K9HA 2JXDA 5DAEA 1PJUA 4JCVE 3OXLA 2M5XA 2W0TA 2GKVA 1Y1BA 5CCLA 3SGQI 1LR8A 3UGLA 1YTPA 2KMOA 2JYYA 1TUSA 2A20A 2GKRI 2N71A 2ROWA 2DB6A 2SGEI 2P6AC 2V1CA 2V1CC 2FNFX 2SGPI 4UXHA 1KBEA 1SGEI 1X74A 3VDUA 5JHWC 2ERWA 2NU2I 1IW4A 1HJAI 2OVOA 4A24A 2KMRA 1OMTA 2QPOA 2E73A 1IY5A 1MT1A 4UXIA 1XX6A 5CCMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2L8E A;  2W0T A; 
#chains in the Genus database with same CATH topology
 2QQC A;  1FAR A;  1HPT A;  1SGY I;  1U5K A;  1WGT A;  2J87 A;  2KMQ A;  2NU3 I;  2UVO A;  1WKX A;  1SGN I;  1TBN A;  2XRC A;  3UOE A;  2GKT I;  3UGD A;  4FKD A;  2SGF I;  1TIH A;  1W3S A;  1M8C A;  5EX0 A;  2VRW B;  3OXG A;  1Y1C A;  5FUX A;  5FUY A;  1CE3 A;  2GVI A;  2B0U C;  1R0R I;  1NUB A;  1CSO I;  3CXL A;  1PPF I;  2QQ0 A;  3D00 A;  2N1A B;  1FAQ A;  1CGJ I;  5E3R A;  1PTR A;  1TBR R;  1HEV A;  1CT2 I;  2RIJ A;  1UUC A;  2WCY A;  3VE5 A;  1IY6 A;  4E1R A;  2NU4 I;  2OD1 A;  1Y8F A;  4GI3 C;  3QTL D;  4WP4 A;  1MJA A;  1XA6 A;  3MEK A;  2WVJ A;  5EX3 A;  3FC3 A;  2E5R A;  1DS2 I;  3R5B A;  1WTJ A;  5E3Q A;  3UFF A;  5J8C A;  3OVO A;  2DIP A;  1TUR A;  2YUU A;  2NU1 I;  1SGQ I;  5FUW A;  2BUS A;  2YQP A;  1CT0 I;  2ORV A;  3R5A A;  1YU6 C;  1UHA A;  3GOX A;  1KMA A;  4OVO A;  4SGB I;  1BUS A;  2LB7 A;  1R79 A;  2KMP A;  1M8B A;  1Z2I A;  2L8E A;  4UXJ A;  2N17 A;  1NXU A;  1K7T A;  5FUV A;  2ELI A;  2SGD I;  1DS3 I;  3PDN A;  1PCE A;  1S20 A;  1V1H A;  2X52 A;  1OYV I;  1PTQ A;  2LEO A;  2SGQ I;  2J9R A;  3BJI A;  3SEK C;  5J8F A;  5HI7 A;  4B6D A;  2OU2 A;  2DKV A;  5E3P A;  2CJS C;  1CHO I;  3R5C A;  1Z7K B;  2QQD A;  4DNC A;  2UZ3 A;  1TBO A;  2PQ8 A;  3TJQ A;  2Y0M A;  1LR9 A;  3B4V C;  3E59 A;  1KBF A;  2CWF A;  1N13 A;  2KCX A;  3UEY A;  2NU0 I;  1WGC A;  3HH2 C;  2ENZ A;  1H0Z A;  2ORW A;  1P9Z A;  3VDP A;  1CGI I;  7WGA A;  1XBT A;  2ODD A;  1SGR I;  1K7U A;  1X4S A;  1MJ9 A;  2WGC A;  3SGB I;  3TOB A;  9WGA A;  2B8T A;  1SGP I;  3OXF A;  4L9M A;  1TGS I;  1P9G A;  1HDL A;  1TOT A;  1K7V A;  2ARP F;  2JW6 A;  3OL0 A;  1LR7 A;  3QAH A;  1AN1 I;  3UGI A;  5HQ8 A;  3UEJ A;  1CT4 I;  3FSX A;  2N52 A;  1FYB A;  2GIV A;  2F3C I;  1FY7 A;  2JA1 A;  1V1I A;  1RFH A;  2OZU A;  3TO6 A;  1OVO A;  1UVG A;  1VDD A;  2JZM A;  2CWH A;  2QQE A;  3QWP A;  4E1P A;  2ENN A;  3RU0 A;  3E2I A;  1SGD I;  2V53 A;  1UVF A;  1TBQ R;  1W4R A;  1OMU A;  1BMO A;  2LUY A;  4HGU A;  2L7X A;  2RC4 A;  3KY9 A;  2K9H A;  2JXD A;  5DAE A;  1MJB A;  1PJU A;  4JCV E;  1ULN A;  3OXL A;  3R5D A;  3TO7 A;  2M5X A;  2W0T A;  2GKV A;  1Y1B A;  1Q9B A;  5CCL A;  3SGQ I;  1LR8 A;  3UGL A;  1YTP A;  2KMO A;  2CWG A;  2JYY A;  1TUS A;  2A20 A;  2GKR I;  2N71 A;  2X3T A;  2ROW A;  2DB6 A;  2SGE I;  2P6A C;  2V1C A;  2V1C C;  2FNF X;  2SGP I;  4UXH A;  1KBE A;  1SGE I;  1X74 A;  3VDU A;  5JHW C;  2ERW A;  2NU2 I;  4MPI A;  4AML A;  1IW4 A;  3FSY A;  1HJA I;  2OVO A;  4A24 A;  2KMR A;  1ULK A;  1OMT A;  2QPO A;  2E73 A;  1IY5 A;  3TO9 A;  1MT1 A;  4UXI A;  1ULM A;  3TOA A;  1XX6 A;  5CCM A; 
#chains in the Genus database with same CATH homology
 2QQC A;  1FAR A;  1HPT A;  1SGY I;  1U5K A;  2J87 A;  2KMQ A;  2NU3 I;  1SGN I;  1TBN A;  2XRC A;  2GKT I;  3UGD A;  4FKD A;  2SGF I;  1TIH A;  1W3S A;  1M8C A;  5EX0 A;  2VRW B;  3OXG A;  1Y1C A;  5FUX A;  5FUY A;  1CE3 A;  2GVI A;  2B0U C;  1R0R I;  1NUB A;  1CSO I;  3CXL A;  1PPF I;  2QQ0 A;  3D00 A;  2N1A B;  1FAQ A;  1CGJ I;  1PTR A;  1TBR R;  1CT2 I;  1UUC A;  2WCY A;  3VE5 A;  1IY6 A;  4E1R A;  2NU4 I;  2OD1 A;  1Y8F A;  4GI3 C;  3QTL D;  1XA6 A;  3MEK A;  5EX3 A;  2WVJ A;  3FC3 A;  2E5R A;  1DS2 I;  3UFF A;  3OVO A;  2DIP A;  1TUR A;  2YUU A;  2NU1 I;  1SGQ I;  5FUW A;  2BUS A;  2YQP A;  1CT0 I;  2ORV A;  1YU6 C;  3GOX A;  1KMA A;  4OVO A;  4SGB I;  1BUS A;  1R79 A;  2KMP A;  1M8B A;  2L8E A;  4UXJ A;  2N17 A;  5FUV A;  2ELI A;  2SGD I;  1DS3 I;  3PDN A;  1PCE A;  1V1H A;  1OYV I;  1PTQ A;  2LEO A;  2SGQ I;  2J9R A;  3BJI A;  3SEK C;  5HI7 A;  4B6D A;  2CJS C;  1CHO I;  1Z7K B;  2QQD A;  2UZ3 A;  1TBO A;  3TJQ A;  3B4V C;  1LR9 A;  3E59 A;  1KBF A;  1N13 A;  2KCX A;  3UEY A;  2NU0 I;  3HH2 C;  2ENZ A;  1H0Z A;  2ORW A;  3VDP A;  1CGI I;  1XBT A;  2ODD A;  1SGR I;  1X4S A;  3SGB I;  2B8T A;  1SGP I;  3OXF A;  4L9M A;  1TGS I;  1HDL A;  1TOT A;  2ARP F;  2JW6 A;  3UGI A;  3OL0 A;  1LR7 A;  5HQ8 A;  1AN1 I;  3UEJ A;  1CT4 I;  2N52 A;  1FYB A;  2F3C I;  2JA1 A;  1V1I A;  1RFH A;  1OVO A;  1VDD A;  1UVG A;  2JZM A;  2QQE A;  3QWP A;  4E1P A;  2ENN A;  3RU0 A;  3E2I A;  1SGD I;  2V53 A;  1UVF A;  1TBQ R;  1W4R A;  1OMU A;  1BMO A;  2LUY A;  4HGU A;  2L7X A;  3KY9 A;  2K9H A;  2JXD A;  5DAE A;  1PJU A;  4JCV E;  3OXL A;  2M5X A;  2W0T A;  2GKV A;  1Y1B A;  5CCL A;  3SGQ I;  1LR8 A;  3UGL A;  1YTP A;  2KMO A;  2JYY A;  1TUS A;  2A20 A;  2GKR I;  2N71 A;  2ROW A;  2DB6 A;  2SGE I;  2P6A C;  2V1C A;  2V1C C;  2FNF X;  2SGP I;  4UXH A;  1KBE A;  1SGE I;  1X74 A;  3VDU A;  5JHW C;  2ERW A;  2NU2 I;  1IW4 A;  1HJA I;  2OVO A;  4A24 A;  2KMR A;  1OMT A;  2QPO A;  2E73 A;  1IY5 A;  1MT1 A;  4UXI A;  1XX6 A;  5CCM A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...