2W0TA

Solution structure of the fcs zinc finger domain of human lmbl2
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
43
structure length
43
Chain Sequence
GSGSEPAVCEMCGIVGTREAFFSKTKRFCSVSCSRSYSSNSKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
molecule keywords LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN
publication title Solution Structure of the Fcs Zinc Finger Domain of the Human Polycomb Group Protein L(3)Mbt-Like 2.
pubmed doi rcsb
source organism Homo sapiens
total genus 4
structure length 43
sequence length 43
ec nomenclature
pdb deposition date 2008-10-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.160 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2w0tA00
2L8EA 2W0TA
chains in the Genus database with same CATH superfamily
1KBEA 2KCXA 1W4RA 1IW4A 2GVIA 1SGNI 2W0TA 1R0RI 2P6AC 2YUUA 2SGQI 1HEVA 2ORWA 2OU2A 4FKDA 2SGFI 3VDUA 4WP4A 1CGJI 1TGSI 4A24A 2UVOA 2J87A 3TJQA 5E3PA 5FUXA 3QAHA 2ORVA 1S20A 3FSYA 2A20A 1PTQA 5JHWC 1LR7A 4JCVE 1W3SA 3OL0A 3RU0A 2JW6A 1LR8A 1N13A 2B8TA 2OVOA 1YTPA 3QWPA 5CCMA 1AN1I 1TOTA 1YU6C 2M5XA 2OD1A 3KY9A 4GI3C 1P9ZA 4SGBI 3VE5A 1Y1BA 1Y8FA 1XX6A 1ULNA 2L8EA 2GKTI 3OXGA 1SGPI 5CCLA 2OZUA 1SGYI 2LEOA 4UXJA 1MT1A 1BMOA 2V1CC 3R5DA 2ENNA 3E2IA 3UFFA 2QQDA 3UGIA 1V1IA 4UXHA 1UUCA 2SGPI 3TOBA 2CWGA 1HPTA 2B0UC 1UVGA 2GKVA 1FARA 1KMAA 1Y1CA 2NU0I 2VRWB 1VDDA 3BJIA 5HQ8A 2ERWA 2JA1A 1KBFA 1PPFI 4DNCA 1K7VA 1WTJA 1Z7KB 3R5AA 5J8CA 1SGDI 1OMUA 2NU2I 2SGEI 3TO6A 1SGQI 3MEKA 1PCEA 2E73A 2K9HA 2NU1I 3UEYA 1UHAA 2CWHA 2QQEA 4E1PA 3QTLD 1CHOI 2DKVA 3OXFA 3SGBI 1MJ9A 2QQ0A 2KMPA 2CWFA 1WGCA 2X52A 5J8FA 1K7UA 1MJAA 2ELIA 3SGQI 3UGLA 1OVOA 1XBTA 3FSXA 3R5BA 5FUVA 3VDPA 3TO9A 2CJSC 2RIJA 1CSOI 5HI7A 2KMQA 3D00A 2F3CI 1DS2I 1UVFA 3UOEA 1RFHA 2FNFX 2GIVA 2ENZA 4UXIA 1H0ZA 3SEKC 2E5RA 2N52A 9WGAA 2L7XA 1V1HA 3OXLA 4B6DA 1TUSA 4AMLA 2LUYA 2ROWA 1OMTA 1OYVI 1ULKA 1WGTA 1DS3I 2PQ8A 3R5CA 1X74A 4OVOA 5EX0A 1P9GA 2N1AB 3TO7A 1X4SA 3PDNA 4MPIA 2NU3I 5E3QA 3GOXA 2J9RA 1IY6A 1FYBA 2KMOA 1Q9BA 3B4VC 5DAEA 1M8CA 1CT4I 1PTRA 2KMRA 1HJAI 2BUSA 2V1CA 2RC4A 3E59A 5E3RA 1TBRR 1TIHA 1TBQR 1XA6A 2ODDA 2UZ3A 2WCYA 3CXLA 2XRCA 2JXDA 2ARPF 2X3TA 1HDLA 1U5KA 5FUYA 1CE3A 1R79A 3UGDA 2WGCA 1MJBA 1SGRI 1FAQA 1TBOA 3OVOA 2QPOA 2N71A 4E1RA 3HH2C 2N17A 1PJUA 4L9MA 3UEJA 1CT0I 2SGDI 2NU4I 1M8BA 1Z2IA 2QQCA 2V53A 2GKRI 1IY5A 2JZMA 5EX3A 2DIPA 2LB7A 2Y0MA 7WGAA 2YQPA 3FC3A 1SGEI 1NUBA 1FY7A 2JYYA 1K7TA 1CGII 1LR9A 1TURA 1WKXA 4HGUA 1NXUA 1ULMA 2WVJA 3TOAA 1BUSA 5FUWA 2DB6A 1TBNA 1CT2I
chains in the Genus database with same CATH topology
1KBEA 2KCXA 1W4RA 1IW4A 2GVIA 1SGNI 2W0TA 1R0RI 2P6AC 2YUUA 2SGQI 2ORWA 4FKDA 2SGFI 3VDUA 1CGJI 1TGSI 4A24A 2J87A 3TJQA 5FUXA 2ORVA 2A20A 1PTQA 5JHWC 1LR7A 4JCVE 1W3SA 3OL0A 3RU0A 2JW6A 1LR8A 1N13A 2B8TA 2OVOA 1YTPA 3QWPA 5CCMA 1AN1I 1TOTA 1YU6C 2M5XA 2OD1A 3KY9A 4GI3C 4SGBI 3VE5A 1Y1BA 1Y8FA 1XX6A 2L8EA 2GKTI 3OXGA 1SGPI 5CCLA 1SGYI 2LEOA 4UXJA 1MT1A 1BMOA 2V1CC 2ENNA 3E2IA 3UFFA 2QQDA 3UGIA 1V1IA 4UXHA 1UUCA 2SGPI 1HPTA 2B0UC 1UVGA 2GKVA 1FARA 1KMAA 1Y1CA 2NU0I 2VRWB 1VDDA 3BJIA 5HQ8A 2ERWA 2JA1A 1KBFA 1PPFI 1Z7KB 1SGDI 1OMUA 2NU2I 2SGEI 1SGQI 3MEKA 1PCEA 2E73A 2K9HA 2NU1I 3UEYA 4E1PA 2QQEA 3QTLD 1CHOI 3OXFA 3SGBI 2QQ0A 2KMPA 2ELIA 3SGQI 3UGLA 1OVOA 1XBTA 5FUVA 3VDPA 2CJSC 1CSOI 5HI7A 2KMQA 3D00A 2F3CI 1DS2I 1UVFA 1RFHA 2FNFX 4UXIA 2ENZA 3SEKC 2E5RA 2N52A 2L7XA 1V1HA 3OXLA 4B6DA 1TUSA 2LUYA 2ROWA 1OMTA 1OYVI 1DS3I 4OVOA 5EX0A 1X74A 3GOXA 2N1AB 1H0ZA 1X4SA 3PDNA 1IY6A 2NU3I 2J9RA 1FYBA 2KMOA 3B4VC 5DAEA 1M8CA 1CT4I 1PTRA 2KMRA 2BUSA 1HJAI 2V1CA 3E59A 1TBRR 1TIHA 1TBQR 1XA6A 2ODDA 2UZ3A 2WCYA 3CXLA 2XRCA 2JXDA 2ARPF 1HDLA 1U5KA 5FUYA 1CE3A 1R79A 3UGDA 1SGRI 1FAQA 1TBOA 3OVOA 2QPOA 2N71A 4E1RA 3HH2C 2N17A 1PJUA 4L9MA 3UEJA 1CT0I 2SGDI 2NU4I 1M8BA 2QQCA 2V53A 2GKRI 1IY5A 2JZMA 5EX3A 2DIPA 2YQPA 3FC3A 1SGEI 1NUBA 2JYYA 1CGII 1LR9A 1TURA 4HGUA 1BUSA 2WVJA 5FUWA 2DB6A 1TBNA 1CT2I
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2L8E A;  2W0T A; 
#chains in the Genus database with same CATH topology
 1KBE A;  2KCX A;  1W4R A;  1IW4 A;  2GVI A;  1SGN I;  2W0T A;  1R0R I;  2P6A C;  2YUU A;  2SGQ I;  1HEV A;  2ORW A;  2OU2 A;  4FKD A;  2SGF I;  3VDU A;  4WP4 A;  1CGJ I;  1TGS I;  4A24 A;  2UVO A;  2J87 A;  3TJQ A;  5E3P A;  5FUX A;  3QAH A;  2ORV A;  1S20 A;  3FSY A;  2A20 A;  1PTQ A;  5JHW C;  1LR7 A;  4JCV E;  1W3S A;  3OL0 A;  3RU0 A;  2JW6 A;  1LR8 A;  1N13 A;  2B8T A;  2OVO A;  1YTP A;  3QWP A;  5CCM A;  1AN1 I;  1TOT A;  1YU6 C;  2M5X A;  2OD1 A;  3KY9 A;  4GI3 C;  1P9Z A;  4SGB I;  3VE5 A;  1Y1B A;  1Y8F A;  1XX6 A;  1ULN A;  2L8E A;  2GKT I;  3OXG A;  1SGP I;  5CCL A;  2OZU A;  1SGY I;  2LEO A;  4UXJ A;  1MT1 A;  1BMO A;  2V1C C;  3R5D A;  2ENN A;  3E2I A;  3UFF A;  2QQD A;  3UGI A;  1V1I A;  4UXH A;  1UUC A;  2SGP I;  3TOB A;  2CWG A;  1HPT A;  2B0U C;  1UVG A;  2GKV A;  1FAR A;  1KMA A;  1Y1C A;  2NU0 I;  2VRW B;  1VDD A;  3BJI A;  5HQ8 A;  2ERW A;  2JA1 A;  1KBF A;  1PPF I;  4DNC A;  1K7V A;  1WTJ A;  1Z7K B;  3R5A A;  5J8C A;  1SGD I;  1OMU A;  2NU2 I;  2SGE I;  3TO6 A;  1SGQ I;  3MEK A;  1PCE A;  2E73 A;  2K9H A;  2NU1 I;  3UEY A;  1UHA A;  2CWH A;  2QQE A;  4E1P A;  3QTL D;  1CHO I;  2DKV A;  3OXF A;  3SGB I;  1MJ9 A;  2QQ0 A;  2KMP A;  2CWF A;  1WGC A;  2X52 A;  5J8F A;  1K7U A;  1MJA A;  2ELI A;  3SGQ I;  3UGL A;  1OVO A;  1XBT A;  3FSX A;  3R5B A;  5FUV A;  3VDP A;  3TO9 A;  2CJS C;  2RIJ A;  1CSO I;  5HI7 A;  2KMQ A;  3D00 A;  2F3C I;  1DS2 I;  1UVF A;  3UOE A;  1RFH A;  2FNF X;  2GIV A;  2ENZ A;  4UXI A;  1H0Z A;  3SEK C;  2E5R A;  2N52 A;  9WGA A;  2L7X A;  1V1H A;  3OXL A;  4B6D A;  1TUS A;  4AML A;  2LUY A;  2ROW A;  1OMT A;  1OYV I;  1ULK A;  1WGT A;  1DS3 I;  2PQ8 A;  3R5C A;  1X74 A;  4OVO A;  5EX0 A;  1P9G A;  2N1A B;  3TO7 A;  1X4S A;  3PDN A;  4MPI A;  2NU3 I;  5E3Q A;  3GOX A;  2J9R A;  1IY6 A;  1FYB A;  2KMO A;  1Q9B A;  3B4V C;  5DAE A;  1M8C A;  1CT4 I;  1PTR A;  2KMR A;  1HJA I;  2BUS A;  2V1C A;  2RC4 A;  3E59 A;  5E3R A;  1TBR R;  1TIH A;  1TBQ R;  1XA6 A;  2ODD A;  2UZ3 A;  2WCY A;  3CXL A;  2XRC A;  2JXD A;  2ARP F;  2X3T A;  1HDL A;  1U5K A;  5FUY A;  1CE3 A;  1R79 A;  3UGD A;  2WGC A;  1MJB A;  1SGR I;  1FAQ A;  1TBO A;  3OVO A;  2QPO A;  2N71 A;  4E1R A;  3HH2 C;  2N17 A;  1PJU A;  4L9M A;  3UEJ A;  1CT0 I;  2SGD I;  2NU4 I;  1M8B A;  1Z2I A;  2QQC A;  2V53 A;  2GKR I;  1IY5 A;  2JZM A;  5EX3 A;  2DIP A;  2LB7 A;  2Y0M A;  7WGA A;  2YQP A;  3FC3 A;  1SGE I;  1NUB A;  1FY7 A;  2JYY A;  1K7T A;  1CGI I;  1LR9 A;  1TUR A;  1WKX A;  4HGU A;  1NXU A;  1ULM A;  2WVJ A;  3TOA A;  1BUS A;  5FUW A;  2DB6 A;  1TBN A;  1CT2 I; 
#chains in the Genus database with same CATH homology
 1KBE A;  2KCX A;  1W4R A;  1IW4 A;  2GVI A;  1SGN I;  2W0T A;  1R0R I;  2P6A C;  2YUU A;  2SGQ I;  2ORW A;  4FKD A;  2SGF I;  3VDU A;  1CGJ I;  1TGS I;  4A24 A;  2J87 A;  3TJQ A;  5FUX A;  2ORV A;  2A20 A;  1PTQ A;  5JHW C;  1LR7 A;  4JCV E;  1W3S A;  3OL0 A;  3RU0 A;  2JW6 A;  1LR8 A;  1N13 A;  2B8T A;  2OVO A;  1YTP A;  3QWP A;  5CCM A;  1AN1 I;  1TOT A;  1YU6 C;  2M5X A;  2OD1 A;  3KY9 A;  4GI3 C;  4SGB I;  3VE5 A;  1Y1B A;  1Y8F A;  1XX6 A;  2L8E A;  2GKT I;  3OXG A;  1SGP I;  5CCL A;  1SGY I;  2LEO A;  4UXJ A;  1MT1 A;  1BMO A;  2V1C C;  2ENN A;  3E2I A;  3UFF A;  2QQD A;  3UGI A;  1V1I A;  4UXH A;  1UUC A;  2SGP I;  1HPT A;  2B0U C;  1UVG A;  2GKV A;  1FAR A;  1KMA A;  1Y1C A;  2NU0 I;  2VRW B;  1VDD A;  3BJI A;  5HQ8 A;  2ERW A;  2JA1 A;  1KBF A;  1PPF I;  1Z7K B;  1SGD I;  1OMU A;  2NU2 I;  2SGE I;  1SGQ I;  3MEK A;  1PCE A;  2E73 A;  2K9H A;  2NU1 I;  3UEY A;  4E1P A;  2QQE A;  3QTL D;  1CHO I;  3OXF A;  3SGB I;  2QQ0 A;  2KMP A;  2ELI A;  3SGQ I;  3UGL A;  1OVO A;  1XBT A;  5FUV A;  3VDP A;  2CJS C;  1CSO I;  5HI7 A;  2KMQ A;  3D00 A;  2F3C I;  1DS2 I;  1UVF A;  1RFH A;  2FNF X;  4UXI A;  2ENZ A;  3SEK C;  2E5R A;  2N52 A;  2L7X A;  1V1H A;  3OXL A;  4B6D A;  1TUS A;  2LUY A;  2ROW A;  1OMT A;  1OYV I;  1DS3 I;  4OVO A;  5EX0 A;  1X74 A;  3GOX A;  2N1A B;  1H0Z A;  1X4S A;  3PDN A;  1IY6 A;  2NU3 I;  2J9R A;  1FYB A;  2KMO A;  3B4V C;  5DAE A;  1M8C A;  1CT4 I;  1PTR A;  2KMR A;  2BUS A;  1HJA I;  2V1C A;  3E59 A;  1TBR R;  1TIH A;  1TBQ R;  1XA6 A;  2ODD A;  2UZ3 A;  2WCY A;  3CXL A;  2XRC A;  2JXD A;  2ARP F;  1HDL A;  1U5K A;  5FUY A;  1CE3 A;  1R79 A;  3UGD A;  1SGR I;  1FAQ A;  1TBO A;  3OVO A;  2QPO A;  2N71 A;  4E1R A;  3HH2 C;  2N17 A;  1PJU A;  4L9M A;  3UEJ A;  1CT0 I;  2SGD I;  2NU4 I;  1M8B A;  2QQC A;  2V53 A;  2GKR I;  1IY5 A;  2JZM A;  5EX3 A;  2DIP A;  2YQP A;  3FC3 A;  1SGE I;  1NUB A;  2JYY A;  1CGI I;  1LR9 A;  1TUR A;  4HGU A;  1BUS A;  2WVJ A;  5FUW A;  2DB6 A;  1TBN A;  1CT2 I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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