2W0TA

Solution structure of the fcs zinc finger domain of human lmbl2
Total Genus 4
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
43
structure length
43
Chain Sequence
GSGSEPAVCEMCGIVGTREAFFSKTKRFCSVSCSRSYSSNSKK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transcription
source organism Homo sapiens
publication title Solution Structure of the Fcs Zinc Finger Domain of the Human Polycomb Group Protein L(3)Mbt-Like 2.
pubmed doi rcsb
molecule keywords LETHAL(3)MALIGNANT BRAIN TUMOR-LIKE 2 PROTEIN
total genus 4
structure length 43
sequence length 43
ec nomenclature
pdb deposition date 2008-10-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.60.160 Alpha Beta 2-Layer Sandwich Wheat Germ Agglutinin (Isolectin 2); domain 1 Wheat Germ Agglutinin (Isolectin 2); domain 1 2w0tA00
2L8EA 2W0TA
chains in the Genus database with same CATH superfamily
1X74A 1UHAA 4DNCA 2ROWA 1PTQA 1FARA 2YQPA 2NU3I 2B8TA 1CT2I 3UOEA 2FNFX 4OVOA 2SGQI 4E1RA 2A20A 2CJSC 1WTJA 1LR7A 2ODDA 1WGCA 3BJIA 2JZMA 1ULNA 1WKXA 2DIPA 3OXLA 4FKDA 2Y0MA 1H0ZA 1SGRI 1HDLA 1TUSA 4WP4A 2V1CA 1CGII 2M5XA 2QQCA 1K7UA 2XRCA 2N1AB 1PCEA 9WGAA 1KMAA 4B6DA 3R5BA 3SGBI 2ARPF 1AN1I 1IY6A 1K7TA 2BUSA 2ORWA 2SGEI 2V53A 3E59A 1P9GA 5E3QA 5FUYA 1N13A 1ULKA 2QQEA 1BUSA 1W4RA 1Y8FA 2SGPI 1HPTA 2V1CC 1Y1CA 1R79A 2SGDI 7WGAA 1MJ9A 1OVOA 3FSYA 1PJUA 3HH2C 2RIJA 1SGQI 3UGIA 2L7XA 3E2IA 1M8BA 1TBNA 4JCVE 3B4VC 2NU2I 1SGYI 2NU0I 5FUXA 1UVFA 1SGNI 2GKTI 3QAHA 1CE3A 2NU4I 2KMOA 1CHOI 1Q9BA 1KBEA 1XX6A 1CSOI 1Z2IA 2YUUA 4UXJA 1Z7KB 2GVIA 2N71A 5HQ8A 3FC3A 1OYVI 2SGFI 3CXLA 4HGUA 1CGJI 2F3CI 1UUCA 2K9HA 2UVOA 3PDNA 1X4SA 2WGCA 1TBQR 5FUWA 1BMOA 1K7VA 2GIVA 3UFFA 1V1IA 1SGDI 3R5AA 3OXGA 1PTRA 1MT1A 1W3SA 1NUBA 1S20A 2N17A 1MJBA 2QQ0A 1MJAA 2JA1A 4UXIA 3GOXA 1R0RI 3VDUA 5E3RA 4UXHA 1OMTA 1PPFI 5J8CA 3R5CA 2OU2A 1M8CA 1SGEI 1UVGA 2X52A 1U5KA 2GKRI 2ENNA 3QWPA 3KY9A 1V1HA 2ORVA 3TOBA 2OD1A 4SGBI 2L8EA 2WCYA 4A24A 3OXFA 3MEKA 1TURA 2JYYA 1TIHA 1FYBA 5E3PA 1CT4I 1ULMA 2KCXA 2KMPA 3TO6A 1FY7A 1SGPI 2LEOA 2OZUA 2P6AC 1P9ZA 3RU0A 2DB6A 2QPOA 3UEYA 2CWHA 1TGSI 4E1PA 3FSXA 1HEVA 3SEKC 2E73A 2RC4A 1OMUA 2W0TA 5HI7A 1TBOA 1XA6A 2LB7A 2JXDA 2J87A 2CWFA 3QTLD 3OL0A 5EX0A 1CT0I 2LUYA 3UGDA 3R5DA 2DKVA 5DAEA 4AMLA 5EX3A 1LR8A 3TJQA 1YU6C 3D00A 3UEJA 2B0UC 1KBFA 2N52A 2ERWA 2WVJA 5FUVA 2UZ3A 1FAQA 1RFHA 1TOTA 2JW6A 2KMRA 2KMQA 2PQ8A 3VDPA 2QQDA 5CCMA 2CWGA 1LR9A 5CCLA 1DS2I 5JHWC 2GKVA 1Y1BA 2NU1I 1VDDA 1HJAI 1YTPA 1DS3I 3TO9A 5J8FA 3OVOA 1NXUA 2X3TA 1IY5A 2VRWB 3SGQI 3TO7A 1IW4A 1WGTA 2J9RA 1TBRR 2ENZA 3VE5A 4GI3C 3UGLA 3TOAA 4MPIA 4L9MA 2ELIA 2E5RA 1XBTA 2OVOA
chains in the Genus database with same CATH topology
1X74A 2ROWA 1PTQA 1FARA 2YQPA 2NU3I 2B8TA 1CT2I 2FNFX 4OVOA 2SGQI 4E1RA 2A20A 2CJSC 2ODDA 1LR7A 3BJIA 2JZMA 3OXLA 2DIPA 4FKDA 1H0ZA 1SGRI 1HDLA 1TUSA 2V1CA 1CGII 2M5XA 2QQCA 2XRCA 2N1AB 1PCEA 1KMAA 4B6DA 3SGBI 1IY6A 2ARPF 1AN1I 2ORWA 2BUSA 2SGEI 2V53A 3E59A 5FUYA 1N13A 1BUSA 2QQEA 1W4RA 1Y8FA 2SGPI 1HPTA 2V1CC 1Y1CA 1R79A 2SGDI 1OVOA 1PJUA 3HH2C 3UGIA 1SGQI 2L7XA 3E2IA 1M8BA 1TBNA 4JCVE 3B4VC 2NU2I 1SGYI 2NU0I 5FUXA 1UVFA 1SGNI 2GKTI 1CE3A 2NU4I 2KMOA 1CHOI 1KBEA 1XX6A 1CSOI 2YUUA 4UXJA 1Z7KB 2GVIA 2N71A 5HQ8A 3FC3A 1OYVI 2SGFI 3CXLA 4HGUA 1CGJI 2F3CI 1UUCA 2K9HA 3PDNA 1X4SA 1TBQR 5FUWA 1BMOA 3UFFA 1V1IA 1SGDI 3OXGA 1PTRA 1MT1A 1W3SA 1NUBA 2N17A 2QQ0A 2JA1A 4UXIA 3GOXA 1R0RI 3VDUA 4UXHA 1OMTA 1PPFI 1M8CA 1SGEI 1UVGA 3QWPA 1U5KA 2GKRI 2ENNA 3KY9A 1V1HA 2ORVA 2OD1A 4SGBI 2L8EA 2WCYA 4A24A 3OXFA 3MEKA 1TURA 2JYYA 1TIHA 1FYBA 1CT4I 2KCXA 2KMPA 1SGPI 2LEOA 2P6AC 3RU0A 3UEYA 2DB6A 2QPOA 4E1PA 1TGSI 3SEKC 2E73A 1OMUA 2W0TA 5HI7A 1TBOA 1XA6A 2JXDA 2J87A 3QTLD 5EX0A 3OL0A 1CT0I 2LUYA 3UGDA 5DAEA 5EX3A 1LR8A 3TJQA 1YU6C 3D00A 3UEJA 2B0UC 1KBFA 2N52A 2ERWA 2WVJA 5FUVA 2UZ3A 1FAQA 1RFHA 1TOTA 2JW6A 2KMRA 2KMQA 3VDPA 2QQDA 5CCMA 1LR9A 5CCLA 1DS2I 5JHWC 2GKVA 1Y1BA 2NU1I 1VDDA 1HJAI 1YTPA 1DS3I 3OVOA 1IY5A 2VRWB 3SGQI 1IW4A 2J9RA 1TBRR 2ENZA 3VE5A 4GI3C 3UGLA 4L9MA 2ELIA 2E5RA 1XBTA 2OVOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2L8E A;  2W0T A; 
#chains in the Genus database with same CATH topology
 1X74 A;  1UHA A;  4DNC A;  2ROW A;  1PTQ A;  1FAR A;  2YQP A;  2NU3 I;  2B8T A;  1CT2 I;  3UOE A;  2FNF X;  4OVO A;  2SGQ I;  4E1R A;  2A20 A;  2CJS C;  1WTJ A;  1LR7 A;  2ODD A;  1WGC A;  3BJI A;  2JZM A;  1ULN A;  1WKX A;  2DIP A;  3OXL A;  4FKD A;  2Y0M A;  1H0Z A;  1SGR I;  1HDL A;  1TUS A;  4WP4 A;  2V1C A;  1CGI I;  2M5X A;  2QQC A;  1K7U A;  2XRC A;  2N1A B;  1PCE A;  9WGA A;  1KMA A;  4B6D A;  3R5B A;  3SGB I;  2ARP F;  1AN1 I;  1IY6 A;  1K7T A;  2BUS A;  2ORW A;  2SGE I;  2V53 A;  3E59 A;  1P9G A;  5E3Q A;  5FUY A;  1N13 A;  1ULK A;  2QQE A;  1BUS A;  1W4R A;  1Y8F A;  2SGP I;  1HPT A;  2V1C C;  1Y1C A;  1R79 A;  2SGD I;  7WGA A;  1MJ9 A;  1OVO A;  3FSY A;  1PJU A;  3HH2 C;  2RIJ A;  1SGQ I;  3UGI A;  2L7X A;  3E2I A;  1M8B A;  1TBN A;  4JCV E;  3B4V C;  2NU2 I;  1SGY I;  2NU0 I;  5FUX A;  1UVF A;  1SGN I;  2GKT I;  3QAH A;  1CE3 A;  2NU4 I;  2KMO A;  1CHO I;  1Q9B A;  1KBE A;  1XX6 A;  1CSO I;  1Z2I A;  2YUU A;  4UXJ A;  1Z7K B;  2GVI A;  2N71 A;  5HQ8 A;  3FC3 A;  1OYV I;  2SGF I;  3CXL A;  4HGU A;  1CGJ I;  2F3C I;  1UUC A;  2K9H A;  2UVO A;  3PDN A;  1X4S A;  2WGC A;  1TBQ R;  5FUW A;  1BMO A;  1K7V A;  2GIV A;  3UFF A;  1V1I A;  1SGD I;  3R5A A;  3OXG A;  1PTR A;  1MT1 A;  1W3S A;  1NUB A;  1S20 A;  2N17 A;  1MJB A;  2QQ0 A;  1MJA A;  2JA1 A;  4UXI A;  3GOX A;  1R0R I;  3VDU A;  5E3R A;  4UXH A;  1OMT A;  1PPF I;  5J8C A;  3R5C A;  2OU2 A;  1M8C A;  1SGE I;  1UVG A;  2X52 A;  1U5K A;  2GKR I;  2ENN A;  3QWP A;  3KY9 A;  1V1H A;  2ORV A;  3TOB A;  2OD1 A;  4SGB I;  2L8E A;  2WCY A;  4A24 A;  3OXF A;  3MEK A;  1TUR A;  2JYY A;  1TIH A;  1FYB A;  5E3P A;  1CT4 I;  1ULM A;  2KCX A;  2KMP A;  3TO6 A;  1FY7 A;  1SGP I;  2LEO A;  2OZU A;  2P6A C;  1P9Z A;  3RU0 A;  2DB6 A;  2QPO A;  3UEY A;  2CWH A;  1TGS I;  4E1P A;  3FSX A;  1HEV A;  3SEK C;  2E73 A;  2RC4 A;  1OMU A;  2W0T A;  5HI7 A;  1TBO A;  1XA6 A;  2LB7 A;  2JXD A;  2J87 A;  2CWF A;  3QTL D;  3OL0 A;  5EX0 A;  1CT0 I;  2LUY A;  3UGD A;  3R5D A;  2DKV A;  5DAE A;  4AML A;  5EX3 A;  1LR8 A;  3TJQ A;  1YU6 C;  3D00 A;  3UEJ A;  2B0U C;  1KBF A;  2N52 A;  2ERW A;  2WVJ A;  5FUV A;  2UZ3 A;  1FAQ A;  1RFH A;  1TOT A;  2JW6 A;  2KMR A;  2KMQ A;  2PQ8 A;  3VDP A;  2QQD A;  5CCM A;  2CWG A;  1LR9 A;  5CCL A;  1DS2 I;  5JHW C;  2GKV A;  1Y1B A;  2NU1 I;  1VDD A;  1HJA I;  1YTP A;  1DS3 I;  3TO9 A;  5J8F A;  3OVO A;  1NXU A;  2X3T A;  1IY5 A;  2VRW B;  3SGQ I;  3TO7 A;  1IW4 A;  1WGT A;  2J9R A;  1TBR R;  2ENZ A;  3VE5 A;  4GI3 C;  3UGL A;  3TOA A;  4MPI A;  4L9M A;  2ELI A;  2E5R A;  1XBT A;  2OVO A; 
#chains in the Genus database with same CATH homology
 1X74 A;  2ROW A;  1PTQ A;  1FAR A;  2YQP A;  2NU3 I;  2B8T A;  1CT2 I;  2FNF X;  4OVO A;  2SGQ I;  4E1R A;  2A20 A;  2CJS C;  2ODD A;  1LR7 A;  3BJI A;  2JZM A;  3OXL A;  2DIP A;  4FKD A;  1H0Z A;  1SGR I;  1HDL A;  1TUS A;  2V1C A;  1CGI I;  2M5X A;  2QQC A;  2XRC A;  2N1A B;  1PCE A;  1KMA A;  4B6D A;  3SGB I;  1IY6 A;  2ARP F;  1AN1 I;  2ORW A;  2BUS A;  2SGE I;  2V53 A;  3E59 A;  5FUY A;  1N13 A;  1BUS A;  2QQE A;  1W4R A;  1Y8F A;  2SGP I;  1HPT A;  2V1C C;  1Y1C A;  1R79 A;  2SGD I;  1OVO A;  1PJU A;  3HH2 C;  3UGI A;  1SGQ I;  2L7X A;  3E2I A;  1M8B A;  1TBN A;  4JCV E;  3B4V C;  2NU2 I;  1SGY I;  2NU0 I;  5FUX A;  1UVF A;  1SGN I;  2GKT I;  1CE3 A;  2NU4 I;  2KMO A;  1CHO I;  1KBE A;  1XX6 A;  1CSO I;  2YUU A;  4UXJ A;  1Z7K B;  2GVI A;  2N71 A;  5HQ8 A;  3FC3 A;  1OYV I;  2SGF I;  3CXL A;  4HGU A;  1CGJ I;  2F3C I;  1UUC A;  2K9H A;  3PDN A;  1X4S A;  1TBQ R;  5FUW A;  1BMO A;  3UFF A;  1V1I A;  1SGD I;  3OXG A;  1PTR A;  1MT1 A;  1W3S A;  1NUB A;  2N17 A;  2QQ0 A;  2JA1 A;  4UXI A;  3GOX A;  1R0R I;  3VDU A;  4UXH A;  1OMT A;  1PPF I;  1M8C A;  1SGE I;  1UVG A;  3QWP A;  1U5K A;  2GKR I;  2ENN A;  3KY9 A;  1V1H A;  2ORV A;  2OD1 A;  4SGB I;  2L8E A;  2WCY A;  4A24 A;  3OXF A;  3MEK A;  1TUR A;  2JYY A;  1TIH A;  1FYB A;  1CT4 I;  2KCX A;  2KMP A;  1SGP I;  2LEO A;  2P6A C;  3RU0 A;  3UEY A;  2DB6 A;  2QPO A;  4E1P A;  1TGS I;  3SEK C;  2E73 A;  1OMU A;  2W0T A;  5HI7 A;  1TBO A;  1XA6 A;  2JXD A;  2J87 A;  3QTL D;  5EX0 A;  3OL0 A;  1CT0 I;  2LUY A;  3UGD A;  5DAE A;  5EX3 A;  1LR8 A;  3TJQ A;  1YU6 C;  3D00 A;  3UEJ A;  2B0U C;  1KBF A;  2N52 A;  2ERW A;  2WVJ A;  5FUV A;  2UZ3 A;  1FAQ A;  1RFH A;  1TOT A;  2JW6 A;  2KMR A;  2KMQ A;  3VDP A;  2QQD A;  5CCM A;  1LR9 A;  5CCL A;  1DS2 I;  5JHW C;  2GKV A;  1Y1B A;  2NU1 I;  1VDD A;  1HJA I;  1YTP A;  1DS3 I;  3OVO A;  1IY5 A;  2VRW B;  3SGQ I;  1IW4 A;  2J9R A;  1TBR R;  2ENZ A;  3VE5 A;  4GI3 C;  3UGL A;  4L9M A;  2ELI A;  2E5R A;  1XBT A;  2OVO A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...