2WLRA

Putative thiosulfate sulfurtransferase ynje
Total Genus 131
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
131
sequence length
408
structure length
407
Chain Sequence
AELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWLDKMSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTRLQKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKVKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords PUTATIVE THIOSULFATE SULFURTRANSFERASE YNJE
publication title Structural Analysis of Ynje, a Putative Thiosulfate Sulfurtransferase
rcsb
source organism Escherichia coli
total genus 131
structure length 407
sequence length 408
ec nomenclature ec 2.8.1.1: Thiosulfate sulfurtransferase.
pdb deposition date 2009-06-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00581 Rhodanese Rhodanese-like domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2wlrA01
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2wlrA03
3.40.250.10 Alpha Beta 3-Layer(aba) Sandwich Oxidized Rhodanese; domain 1 Rhodanese-like domain 2wlrA02
1T3KA 3FLHA 1H4KX 2EG4B 1YM9A 1RHSA 3TG3A 1H4MX 3TP9A 2WLXA 2OUCA 4OCGA 2JTRA 2JTSA 2UZQA 3I2VA 3OP3A 1CWTA 2DCQA 1YMDA 3F4AA 4WH9A 3FOJA 2J6PA 1TQ1A 2JTQA 2MOIA 5LAMA 2IFDA 1CWRA 3G5JA 1YMLA 1YT8A 3HWIA 5LAOA 1YMKA 1URHA 3ICRA 3K9RA 1BOHA 1RHDA 3AAXA 3GK5A 1CWSA 2HHGA 3ILMA 3O3WA 4F67A 1UARA 4WH7A 3D1PA 3HZUA 3HIXA 1YS0A 5HBPA 1VEEA 1DP2A 2KL3A 1HZMA 3OLHA 4JGTA 1ORBA 3R2UA 2A2KA 1E0CA 2K0ZA 3ICSA 1BOIA 3MZZA 3FNJA 2MOLA 2MRMA 2ORAA 1C25A 1OKGA 1WV9A 3FS5A 3NTAA 3UTNX 5HBLA 1QB0A 2WLRA 3I3UA 3ICTA 2GWFA 1GN0A 3P3AA 3NTDA 3IWHA 2EG4A 2EG3A 5HBOA 3IPPA 3NHVA 3AAYA 1WHBA 5HPAA 2VSWA 1QXNA 3TG1B 3IPOA 2FSXA 2IFVA 1GMXA 5HBQA 3NT6A
chains in the Genus database with same CATH superfamily
1T3KA 3FLHA 1H4KX 2EG4B 1YM9A 1RHSA 3TG3A 1H4MX 3TP9A 2WLXA 2OUCA 4OCGA 2JTRA 2JTSA 2UZQA 3I2VA 3OP3A 1CWTA 2DCQA 2Q82A 1YMDA 3F4AA 4WH9A 3FOJA 2J6PA 1TQ1A 2JTQA 2MOIA 5LAMA 2IFDA 1CWRA 3G5JA 1YMLA 1YT8A 3HWIA 5LAOA 1YMKA 1URHA 3ICRA 3K9RA 1BOHA 1RHDA 3AAXA 3GK5A 1CWSA 2HHGA 3ILMA 3O3WA 4F67A 1UARA 4WH7A 3D1PA 3HZUA 3HIXA 1YS0A 5HBPA 1VEEA 1DP2A 2KL3A 1HZMA 3OLHA 4JGTA 1ORBA 3R2UA 2A2KA 1E0CA 2K0ZA 3ICSA 1BOIA 3MZZA 3FNJA 2MOLA 2MRMA 2ORAA 1C25A 1OKGA 1WV9A 3FS5A 3NTAA 3UTNX 5HBLA 1QB0A 2WLRA 3I3UA 3ICTA 2GWFA 1GN0A 3P3AA 3NTDA 3IWHA 2EG4A 2EG3A 5HBOA 3IPPA 3NHVA 3AAYA 1WHBA 5HPAA 2VSWA 1QXNA 3TG1B 3IPOA 2FSXA 2IFVA 1GMXA 5HBQA 3NT6A
chains in the Genus database with same CATH topology
1T3KA 3FLHA 1H4KX 2EG4B 1YM9A 1RHSA 3TG3A 1H4MX 3TP9A 2WLXA 2OUCA 4OCGA 2JTRA 2JTSA 2UZQA 3I2VA 3OP3A 1CWTA 2DCQA 1YMDA 3F4AA 4WH9A 3FOJA 2J6PA 1TQ1A 2JTQA 2MOIA 5LAMA 2IFDA 1CWRA 3G5JA 1YMLA 1YT8A 3HWIA 5LAOA 1YMKA 1URHA 3ICRA 3K9RA 1BOHA 1RHDA 3AAXA 3GK5A 1CWSA 2HHGA 3ILMA 3O3WA 4F67A 1UARA 4WH7A 3D1PA 3HZUA 3HIXA 1YS0A 5HBPA 1VEEA 1DP2A 2KL3A 1HZMA 3OLHA 4JGTA 1ORBA 3R2UA 2A2KA 1E0CA 2K0ZA 3ICSA 1BOIA 3MZZA 3FNJA 2MOLA 2MRMA 2ORAA 1C25A 1OKGA 1WV9A 3FS5A 3NTAA 3UTNX 5HBLA 1QB0A 2WLRA 3I3UA 3ICTA 2GWFA 1GN0A 3P3AA 3NTDA 3IWHA 2EG4A 2EG3A 5HBOA 3IPPA 3NHVA 3AAYA 1WHBA 5HPAA 2VSWA 1QXNA 3TG1B 3IPOA 2FSXA 2IFVA 1GMXA 5HBQA 3NT6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T3K A;  3FLH A;  1H4K X;  2EG4 B;  1YM9 A;  1RHS A;  3TG3 A;  1H4M X;  3TP9 A;  2WLX A;  2OUC A;  4OCG A;  2JTR A;  2JTS A;  2UZQ A;  3I2V A;  3OP3 A;  1CWT A;  2DCQ A;  1YMD A;  3F4A A;  4WH9 A;  3FOJ A;  2J6P A;  1TQ1 A;  2JTQ A;  2MOI A;  5LAM A;  2IFD A;  1CWR A;  3G5J A;  1YML A;  1YT8 A;  3HWI A;  5LAO A;  1YMK A;  1URH A;  3ICR A;  3K9R A;  1BOH A;  1RHD A;  3AAX A;  3GK5 A;  1CWS A;  2HHG A;  3ILM A;  3O3W A;  4F67 A;  1UAR A;  4WH7 A;  3D1P A;  3HZU A;  3HIX A;  1YS0 A;  5HBP A;  1VEE A;  1DP2 A;  2KL3 A;  1HZM A;  3OLH A;  4JGT A;  1ORB A;  3R2U A;  2A2K A;  1E0C A;  2K0Z A;  3ICS A;  1BOI A;  3MZZ A;  3FNJ A;  2MOL A;  2MRM A;  2ORA A;  1C25 A;  1OKG A;  1WV9 A;  3FS5 A;  3NTA A;  3UTN X;  5HBL A;  1QB0 A;  2WLR A;  3I3U A;  3ICT A;  2GWF A;  1GN0 A;  3P3A A;  3NTD A;  3IWH A;  2EG4 A;  2EG3 A;  5HBO A;  3IPP A;  3NHV A;  3AAY A;  1WHB A;  5HPA A;  2VSW A;  1QXN A;  3TG1 B;  3IPO A;  2FSX A;  2IFV A;  1GMX A;  5HBQ A;  3NT6 A; 
#chains in the Genus database with same CATH topology
 1T3K A;  3FLH A;  1H4K X;  2EG4 B;  1YM9 A;  1RHS A;  3TG3 A;  1H4M X;  3TP9 A;  2WLX A;  2OUC A;  4OCG A;  2JTR A;  2JTS A;  2UZQ A;  3I2V A;  3OP3 A;  1CWT A;  2DCQ A;  2Q82 A;  1YMD A;  3F4A A;  4WH9 A;  3FOJ A;  2J6P A;  1TQ1 A;  2JTQ A;  2MOI A;  5LAM A;  2IFD A;  1CWR A;  3G5J A;  1YML A;  1YT8 A;  3HWI A;  5LAO A;  1YMK A;  1URH A;  3ICR A;  3K9R A;  1BOH A;  1RHD A;  3AAX A;  3GK5 A;  1CWS A;  2HHG A;  3ILM A;  3O3W A;  4F67 A;  1UAR A;  4WH7 A;  3D1P A;  3HZU A;  3HIX A;  1YS0 A;  5HBP A;  1VEE A;  1DP2 A;  2KL3 A;  1HZM A;  3OLH A;  4JGT A;  1ORB A;  3R2U A;  2A2K A;  1E0C A;  2K0Z A;  3ICS A;  1BOI A;  3MZZ A;  3FNJ A;  2MOL A;  2MRM A;  2ORA A;  1C25 A;  1OKG A;  1WV9 A;  3FS5 A;  3NTA A;  3UTN X;  5HBL A;  1QB0 A;  2WLR A;  3I3U A;  3ICT A;  2GWF A;  1GN0 A;  3P3A A;  3NTD A;  3IWH A;  2EG4 A;  2EG3 A;  5HBO A;  3IPP A;  3NHV A;  3AAY A;  1WHB A;  5HPA A;  2VSW A;  1QXN A;  3TG1 B;  3IPO A;  2FSX A;  2IFV A;  1GMX A;  5HBQ A;  3NT6 A; 
#chains in the Genus database with same CATH homology
 1T3K A;  3FLH A;  1H4K X;  2EG4 B;  1YM9 A;  1RHS A;  3TG3 A;  1H4M X;  3TP9 A;  2WLX A;  2OUC A;  4OCG A;  2JTR A;  2JTS A;  2UZQ A;  3I2V A;  3OP3 A;  1CWT A;  2DCQ A;  1YMD A;  3F4A A;  4WH9 A;  3FOJ A;  2J6P A;  1TQ1 A;  2JTQ A;  2MOI A;  5LAM A;  2IFD A;  1CWR A;  3G5J A;  1YML A;  1YT8 A;  3HWI A;  5LAO A;  1YMK A;  1URH A;  3ICR A;  3K9R A;  1BOH A;  1RHD A;  3AAX A;  3GK5 A;  1CWS A;  2HHG A;  3ILM A;  3O3W A;  4F67 A;  1UAR A;  4WH7 A;  3D1P A;  3HZU A;  3HIX A;  1YS0 A;  5HBP A;  1VEE A;  1DP2 A;  2KL3 A;  1HZM A;  3OLH A;  4JGT A;  1ORB A;  3R2U A;  2A2K A;  1E0C A;  2K0Z A;  3ICS A;  1BOI A;  3MZZ A;  3FNJ A;  2MOL A;  2MRM A;  2ORA A;  1C25 A;  1OKG A;  1WV9 A;  3FS5 A;  3NTA A;  3UTN X;  5HBL A;  1QB0 A;  2WLR A;  3I3U A;  3ICT A;  2GWF A;  1GN0 A;  3P3A A;  3NTD A;  3IWH A;  2EG4 A;  2EG3 A;  5HBO A;  3IPP A;  3NHV A;  3AAY A;  1WHB A;  5HPA A;  2VSW A;  1QXN A;  3TG1 B;  3IPO A;  2FSX A;  2IFV A;  1GMX A;  5HBQ A;  3NT6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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