2XRBA

Structure of the n-terminal four domains of the complement regulator rat crry
Total Genus 39
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
254
structure length
254
Chain Sequence
QCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGYIKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCAA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords COMPLEMENT REGULATORY PROTEIN CRRY
publication title Structures of the Rat Complement Regulator Crry.
pubmed doi rcsb
source organism Rattus norvegicus
total genus 39
structure length 254
sequence length 254
ec nomenclature
pdb deposition date 2010-09-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00084 Sushi Sushi repeat (SCR repeat)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2xrbA03
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2xrbA02
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2xrbA01
2.10.70.10 Mainly Beta Ribbon Complement Module; domain 1 Complement Module, domain 1 2xrbA04
1SS2A 2MCYA 2W81A 1H2QP 3RJ3D 2B5ID 1MD7A 3IU3I 2IZ3A 3NFPI 1OK3A 1MD8A 2QY0A 4AYDA 1E5GA 2CKUA 2JRAA 3OEDC 4DJZA 3SW0X 3OXUD 3OP8A 1H04P 2BZMA 2IZ4A 4AYIA 3KXVA 5HYPA 4AYMA 5JPMG 4J38B 1ELVA 1GKNA 4PZ5A 4A5WB 3GXEA 1E88A 1O9AA 4WJG2 2V8EA 1U5MA 1G4GA 1NWVA 1E8BA 1OJYA 1H2PP 1GPZA 5HYTB 1VVCA 1TPMA 2G7IA 1HFHA 1OK9A 2EC3A 1QO6A 4MUCA 3ZD2A 5HYUB 1QUBA 2KMSA 1OJVA 1TPNA 4IGDA 4CSYA 2CG7A 2ERJA 4C16A 4F4OC 3ERBA 3INBC 1QGBA 2KRIA 2MCZA 3ZD1A 2RKZA 1FBRA 2YBYA 4AYEA 2RL0A 2RKYA 2RLQA 3GOVA 1UOTP 1PPQA 2XRDA 1OK1A 3M7PA 4LOSA 2CG6A 4K12A 1Q3XA 1LY2A 3TVJA 2LOJA 4JHSA 1HCCA 1Z92B 2EHFA 5FO8C 3IX0A 4ZH1D 5HZPB 1TPGA 1GHQB 3MQLA 1VVDA 1OJWA 2UWNA 1H03P 4B2SA 2JGWA 2W80A 4FXGG 3O8EB 3EJHA 3ZRZA 1ZJKA 1CKLA 1SRZA 3L89M 4ONTD 4B2RA 3CALA 2WIIC 4LOTA 3T5OA 1C1ZA 2O39C 2XQWC 5I0QB 3R62A 4YNXA 1OK2A 2YRAA 2XWBF 2RLPA 2A55A 2JGXA 1HFIA 1GKGA 2XRBA 1G4FA 3KZJA 4KKDA 2XWJI
chains in the Genus database with same CATH superfamily
1SS2A 2MCYA 2W81A 1H2QP 3RJ3D 2B5ID 1MD7A 3IU3I 2IZ3A 3NFPI 1OK3A 1MD8A 2QY0A 4AYDA 1E5GA 2CKUA 2JRAA 3OEDC 4DJZA 3SW0X 3OXUD 3OP8A 1H04P 2BZMA 2IZ4A 4AYIA 3KXVA 5HYPA 4AYMA 5JPMG 4J38B 1ELVA 1GKNA 1RLHA 4PZ5A 4A5WB 3GXEA 1E88A 1O9AA 4WJG2 2V8EA 2ZYCA 1U5MA 1G4GA 1NWVA 1E8BA 1OJYA 4PO7A 1H2PP 1GPZA 5HYTB 1VVCA 3CI0J 1TPMA 2G7IA 1HFHA 1OK9A 2EC3A 3ZLDA 1QO6A 4MUCA 3ZLEA 3ZD2A 5HYUB 2Y8SA 1QUBA 2KMSA 3FGTA 1OJVA 4BWCA 1TPNA 4IGDA 4CSYA 2CG7A 2ERJA 4C16A 4F4OC 3ERBA 3INBC 1QGBA 2X2ZA 2Y8TA 2KRIA 2MCZA 3ZD1A 2RKZA 1FBRA 2YBYA 4AYEA 2RL0A 2RKYA 2RLQA 3GOVA 1UOTP 1PPQA 2XRDA 1OK1A 3M7PA 4LOSA 2CG6A 4K12A 1Q3XA 1LY2A 3TVJA 2LOJA 4JHSA 1HCCA 5DN5A 4YIZA 1Z92B 2EHFA 2I2LA 5FO8C 3WSXA 3FGRA 3K3TA 3IX0A 4ZH1D 5HZPB 4N7EA 4MSLA 1TPGA 1GHQB 3MQLA 1VVDA 1OJWA 2UWNA 1H03P 4B2SA 2JGWA 2W80A 4FXGG 3O8EB 3EJHA 3F6KA 3ZRZA 5DN4A 1ZJKA 3WSYA 1CKLA 1SRZA 3L89M 3VWOA 4ONTD 4B2RA 3CALA 2WIIC 4LOTA 3T5OA 1C1ZA 2O39C 2XQWC 5I0QB 3R62A 4YNXA 1OK2A 2YRAA 2XWBF 2RLPA 2Y8RA 2A55A 2JGXA 4APLA 1HFIA 1GKGA 2XRBA 1G4FA 3NJAA 3KZJA 4KKDA 2XWJI
chains in the Genus database with same CATH topology
1SS2A 2MCYA 2W81A 1H2QP 3RJ3D 2B5ID 1MD7A 3IU3I 2IZ3A 3NFPI 1OK3A 1MD8A 2QY0A 4AYDA 1E5GA 2CKUA 2JRAA 3OEDC 4DJZA 3SW0X 3OXUD 3OP8A 1H04P 2BZMA 2IZ4A 4AYIA 3KXVA 5HYPA 4AYMA 5JPMG 4J38B 1ELVA 1GKNA 4PZ5A 4A5WB 3GXEA 1E88A 1O9AA 4WJG2 2V8EA 1U5MA 1G4GA 1NWVA 1E8BA 1OJYA 1H2PP 1GPZA 5HYTB 1VVCA 1TPMA 2G7IA 1HFHA 1OK9A 2EC3A 1QO6A 4MUCA 3ZD2A 5HYUB 1QUBA 2KMSA 1OJVA 1TPNA 4IGDA 4CSYA 2CG7A 2ERJA 4C16A 4F4OC 3ERBA 3INBC 1QGBA 2KRIA 2MCZA 3ZD1A 2RKZA 1FBRA 2YBYA 4AYEA 2RL0A 2RKYA 2RLQA 3GOVA 1UOTP 1PPQA 2XRDA 1OK1A 3M7PA 4LOSA 2CG6A 4K12A 1Q3XA 1LY2A 3TVJA 2LOJA 4JHSA 1HCCA 1Z92B 2EHFA 5FO8C 3IX0A 4ZH1D 5HZPB 1TPGA 1GHQB 3MQLA 1VVDA 1OJWA 2UWNA 1H03P 4B2SA 2JGWA 2W80A 4FXGG 3O8EB 3EJHA 3ZRZA 1ZJKA 1CKLA 1SRZA 3L89M 4ONTD 4B2RA 3CALA 2WIIC 4LOTA 3T5OA 1C1ZA 2O39C 2XQWC 5I0QB 3R62A 4YNXA 1OK2A 2YRAA 2XWBF 2RLPA 2A55A 2JGXA 1HFIA 1GKGA 2XRBA 1G4FA 3KZJA 4KKDA 2XWJI
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SS2 A;  2MCY A;  2W81 A;  1H2Q P;  3RJ3 D;  2B5I D;  1MD7 A;  3IU3 I;  2IZ3 A;  3NFP I;  1OK3 A;  1MD8 A;  2QY0 A;  4AYD A;  1E5G A;  2CKU A;  2JRA A;  3OED C;  4DJZ A;  3SW0 X;  3OXU D;  3OP8 A;  1H04 P;  2BZM A;  2IZ4 A;  4AYI A;  3KXV A;  5HYP A;  4AYM A;  5JPM G;  4J38 B;  1ELV A;  1GKN A;  4PZ5 A;  4A5W B;  3GXE A;  1E88 A;  1O9A A;  4WJG 2;  2V8E A;  1U5M A;  1G4G A;  1NWV A;  1E8B A;  1OJY A;  1H2P P;  1GPZ A;  5HYT B;  1VVC A;  1TPM A;  2G7I A;  1HFH A;  1OK9 A;  2EC3 A;  1QO6 A;  4MUC A;  3ZD2 A;  5HYU B;  1QUB A;  2KMS A;  1OJV A;  1TPN A;  4IGD A;  4CSY A;  2CG7 A;  2ERJ A;  4C16 A;  4F4O C;  3ERB A;  3INB C;  1QGB A;  2KRI A;  2MCZ A;  3ZD1 A;  2RKZ A;  1FBR A;  2YBY A;  4AYE A;  2RL0 A;  2RKY A;  2RLQ A;  3GOV A;  1UOT P;  1PPQ A;  2XRD A;  1OK1 A;  3M7P A;  4LOS A;  2CG6 A;  4K12 A;  1Q3X A;  1LY2 A;  3TVJ A;  2LOJ A;  4JHS A;  1HCC A;  1Z92 B;  2EHF A;  5FO8 C;  3IX0 A;  4ZH1 D;  5HZP B;  1TPG A;  1GHQ B;  3MQL A;  1VVD A;  1OJW A;  2UWN A;  1H03 P;  4B2S A;  2JGW A;  2W80 A;  4FXG G;  3O8E B;  3EJH A;  3ZRZ A;  1ZJK A;  1CKL A;  1SRZ A;  3L89 M;  4ONT D;  4B2R A;  3CAL A;  2WII C;  4LOT A;  3T5O A;  1C1Z A;  2O39 C;  2XQW C;  5I0Q B;  3R62 A;  4YNX A;  1OK2 A;  2YRA A;  2XWB F;  2RLP A;  2A55 A;  2JGX A;  1HFI A;  1GKG A;  2XRB A;  1G4F A;  3KZJ A;  4KKD A;  2XWJ I; 
#chains in the Genus database with same CATH topology
 1SS2 A;  2MCY A;  2W81 A;  1H2Q P;  3RJ3 D;  2B5I D;  1MD7 A;  3IU3 I;  2IZ3 A;  3NFP I;  1OK3 A;  1MD8 A;  2QY0 A;  4AYD A;  1E5G A;  2CKU A;  2JRA A;  3OED C;  4DJZ A;  3SW0 X;  3OXU D;  3OP8 A;  1H04 P;  2BZM A;  2IZ4 A;  4AYI A;  3KXV A;  5HYP A;  4AYM A;  5JPM G;  4J38 B;  1ELV A;  1GKN A;  1RLH A;  4PZ5 A;  4A5W B;  3GXE A;  1E88 A;  1O9A A;  4WJG 2;  2V8E A;  2ZYC A;  1U5M A;  1G4G A;  1NWV A;  1E8B A;  1OJY A;  4PO7 A;  1H2P P;  1GPZ A;  5HYT B;  1VVC A;  3CI0 J;  1TPM A;  2G7I A;  1HFH A;  1OK9 A;  2EC3 A;  3ZLD A;  1QO6 A;  4MUC A;  3ZLE A;  3ZD2 A;  5HYU B;  2Y8S A;  1QUB A;  2KMS A;  3FGT A;  1OJV A;  4BWC A;  1TPN A;  4IGD A;  4CSY A;  2CG7 A;  2ERJ A;  4C16 A;  4F4O C;  3ERB A;  3INB C;  1QGB A;  2X2Z A;  2Y8T A;  2KRI A;  2MCZ A;  3ZD1 A;  2RKZ A;  1FBR A;  2YBY A;  4AYE A;  2RL0 A;  2RKY A;  2RLQ A;  3GOV A;  1UOT P;  1PPQ A;  2XRD A;  1OK1 A;  3M7P A;  4LOS A;  2CG6 A;  4K12 A;  1Q3X A;  1LY2 A;  3TVJ A;  2LOJ A;  4JHS A;  1HCC A;  5DN5 A;  4YIZ A;  1Z92 B;  2EHF A;  2I2L A;  5FO8 C;  3WSX A;  3FGR A;  3K3T A;  3IX0 A;  4ZH1 D;  5HZP B;  4N7E A;  4MSL A;  1TPG A;  1GHQ B;  3MQL A;  1VVD A;  1OJW A;  2UWN A;  1H03 P;  4B2S A;  2JGW A;  2W80 A;  4FXG G;  3O8E B;  3EJH A;  3F6K A;  3ZRZ A;  5DN4 A;  1ZJK A;  3WSY A;  1CKL A;  1SRZ A;  3L89 M;  3VWO A;  4ONT D;  4B2R A;  3CAL A;  2WII C;  4LOT A;  3T5O A;  1C1Z A;  2O39 C;  2XQW C;  5I0Q B;  3R62 A;  4YNX A;  1OK2 A;  2YRA A;  2XWB F;  2RLP A;  2Y8R A;  2A55 A;  2JGX A;  4APL A;  1HFI A;  1GKG A;  2XRB A;  1G4F A;  3NJA A;  3KZJ A;  4KKD A;  2XWJ I; 
#chains in the Genus database with same CATH homology
 1SS2 A;  2MCY A;  2W81 A;  1H2Q P;  3RJ3 D;  2B5I D;  1MD7 A;  3IU3 I;  2IZ3 A;  3NFP I;  1OK3 A;  1MD8 A;  2QY0 A;  4AYD A;  1E5G A;  2CKU A;  2JRA A;  3OED C;  4DJZ A;  3SW0 X;  3OXU D;  3OP8 A;  1H04 P;  2BZM A;  2IZ4 A;  4AYI A;  3KXV A;  5HYP A;  4AYM A;  5JPM G;  4J38 B;  1ELV A;  1GKN A;  4PZ5 A;  4A5W B;  3GXE A;  1E88 A;  1O9A A;  4WJG 2;  2V8E A;  1U5M A;  1G4G A;  1NWV A;  1E8B A;  1OJY A;  1H2P P;  1GPZ A;  5HYT B;  1VVC A;  1TPM A;  2G7I A;  1HFH A;  1OK9 A;  2EC3 A;  1QO6 A;  4MUC A;  3ZD2 A;  5HYU B;  1QUB A;  2KMS A;  1OJV A;  1TPN A;  4IGD A;  4CSY A;  2CG7 A;  2ERJ A;  4C16 A;  4F4O C;  3ERB A;  3INB C;  1QGB A;  2KRI A;  2MCZ A;  3ZD1 A;  2RKZ A;  1FBR A;  2YBY A;  4AYE A;  2RL0 A;  2RKY A;  2RLQ A;  3GOV A;  1UOT P;  1PPQ A;  2XRD A;  1OK1 A;  3M7P A;  4LOS A;  2CG6 A;  4K12 A;  1Q3X A;  1LY2 A;  3TVJ A;  2LOJ A;  4JHS A;  1HCC A;  1Z92 B;  2EHF A;  5FO8 C;  3IX0 A;  4ZH1 D;  5HZP B;  1TPG A;  1GHQ B;  3MQL A;  1VVD A;  1OJW A;  2UWN A;  1H03 P;  4B2S A;  2JGW A;  2W80 A;  4FXG G;  3O8E B;  3EJH A;  3ZRZ A;  1ZJK A;  1CKL A;  1SRZ A;  3L89 M;  4ONT D;  4B2R A;  3CAL A;  2WII C;  4LOT A;  3T5O A;  1C1Z A;  2O39 C;  2XQW C;  5I0Q B;  3R62 A;  4YNX A;  1OK2 A;  2YRA A;  2XWB F;  2RLP A;  2A55 A;  2JGX A;  1HFI A;  1GKG A;  2XRB A;  1G4F A;  3KZJ A;  4KKD A;  2XWJ I; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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