2XSVA

Crystal structure of l69a mutant acinetobacter radioresistens catechol 1,2 dioxygenase
Total Genus 96
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
96
sequence length
309
structure length
309
Chain Sequence
HHHHNRQQIDALVKQMNVDTAKGPVDERIQQVVVRLLGDLFQAIEDLDIQPSEVWKGLEYLTDAGQANELGALAAGLGLEHYLDLRADEADAKAGITGGTPRTIEGPLYVAGAPESVGFARMDDGSESDKVDTLIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFVSAPGYRKLTTQFNIEGDEYLWDDFAFATRDGLVATATDVTDEAEIARRELDKPFKHITFNVELVKEAEAAPSSEVERRRASA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase
molecule keywords CATECHOL 1,2 DIOXYGENASE
publication title X-Ray Crystallography, Mass Spectrometry and Single Crystal Microspectrophotometry: A Multidisciplinary Characterization of Catechol 1,2 Dioxygenase.
pubmed doi rcsb
source organism Acinetobacter radioresistens
total genus 96
structure length 309
sequence length 309
ec nomenclature
pdb deposition date 2010-09-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00775 Dioxygenase_C Dioxygenase
A PF04444 Dioxygenase_N Catechol dioxygenase N terminus
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.130.10 Mainly Beta Sandwich Protocatechuate 3,4-Dioxygenase, subunit A Aromatic compound dioxygenase 2xsvA00
1YKKA 3MFLM 2BUUB 1EOBA 3PCMA 3PCCA 2BUMA 4WHPA 2PCDA 1DLTA 2XSVA 2BUTB 3MV4M 4WHQA 4WHPD 3PCAA 3MI5M 1EOAA 2BURB 3LKTA 3PCDA 2BUQA 2BV0B 1YKNB 3I4YA 2XSUA 5TD3A 4WHSA 4WHOA 2BUZB 4WHRA 3PCNA 1YKOA 3PCIA 3MV6A 3PCCM 4WHSD 4WHOD 2BUWB 3HJSA 2AZQA 3PCAM 2BUXA 3PCDM 1EO2B 3PCJA 2XSRA 1YKKB 3I51A 3PCEA 4WHRF 3PCFA 2BUMB 2BUUA 3MI1A 3PCLM 3PCBA 2BUYA 4ILTA 3LXVM 3PCHM 3LMXM 3N9TA 3PCKA 3TH1A 4WHQB 2BUTA 1EO9A 3T63A 1EOAB 2BUVA 1YKLB 3PCMM 1TMXA 1EOCA 4ILVA 2PCDM 1YKNA 3HJ8A 3MFLA 4WHSB 1DMHA 3PCJM 3HHYA 1YKPA 1YKOB 1S9AA 3LKTM 3PCFM 3MI1M 1YKMB 3MV4A 3T67A 1EOBB 3PCKM 4WHPB 3HHXA 2BOYA 2BUWA 3T63M 3O6RA 2BUXB 3PCNM 3O5UA 3PCIM 3MV6M 3PCGA 3I4VA 2BUQB 2BURA 1DLMA 2BUYB 2BV0A 3HGIA 4WHOB 1EO9B 2BUVB 2BUZA 4WHRB 3T67M 3PCEM 1YKLA 1EOCB 3PCBM 3MI5A 3O32A 1DLQA 3PCGM 3HJQA 3PCLA 1YKPB 3HKPA 3O6JA 3LXVA 3PCHA 3LMXA 1EO2A 1YKMA
chains in the Genus database with same CATH superfamily
1YKKA 3MFLM 2BUUB 1EOBA 3PCMA 3PCCA 2BUMA 4WHPA 2PCDA 1DLTA 2XSVA 2BUTB 3MV4M 4WHQA 4WHPD 3PCAA 3MI5M 1EOAA 2BURB 3LKTA 3PCDA 2BUQA 2BV0B 1YKNB 3I4YA 2XSUA 5TD3A 4WHSA 4WHOA 2BUZB 4WHRA 3PCNA 1YKOA 3PCIA 3MV6A 3PCCM 4WHSD 4WHOD 2BUWB 3HJSA 2AZQA 3PCAM 2BUXA 3PCDM 1EO2B 3PCJA 2XSRA 1YKKB 3I51A 3PCEA 4WHRF 3PCFA 2BUMB 2BUUA 3MI1A 3PCLM 3PCBA 2BUYA 4ILTA 3LXVM 3PCHM 3LMXM 3N9TA 3PCKA 3TH1A 4WHQB 2BUTA 1EO9A 3T63A 1EOAB 2BUVA 1YKLB 3PCMM 1TMXA 1EOCA 4ILVA 2PCDM 1YKNA 3HJ8A 3MFLA 4WHSB 1DMHA 3PCJM 3HHYA 1YKPA 1YKOB 1S9AA 3LKTM 3PCFM 3MI1M 1YKMB 3MV4A 3T67A 1EOBB 3PCKM 4WHPB 3HHXA 2BOYA 2BUWA 3T63M 3O6RA 2BUXB 3PCNM 3O5UA 3PCIM 3MV6M 3PCGA 3I4VA 2BUQB 2BURA 1DLMA 2BUYB 2BV0A 3HGIA 4WHOB 1EO9B 2BUVB 2BUZA 4WHRB 3T67M 3PCEM 1YKLA 1EOCB 3PCBM 3MI5A 3O32A 1DLQA 3PCGM 3HJQA 3PCLA 1YKPB 3HKPA 3O6JA 3LXVA 3PCHA 3LMXA 1EO2A 1YKMA
chains in the Genus database with same CATH topology
1YKKA 3MFLM 2BUUB 1EOBA 3PCMA 3PCCA 2BUMA 4WHPA 2PCDA 1DLTA 2XSVA 2BUTB 3MV4M 4WHQA 4WHPD 3PCAA 3MI5M 1EOAA 2BURB 3LKTA 3PCDA 2BUQA 2BV0B 1YKNB 3I4YA 2XSUA 5TD3A 4WHSA 4WHOA 2BUZB 4WHRA 3PCNA 1YKOA 3PCIA 3MV6A 3PCCM 4WHSD 4WHOD 2BUWB 3HJSA 2AZQA 3PCAM 2BUXA 3PCDM 1EO2B 3PCJA 2XSRA 1YKKB 3I51A 3PCEA 4WHRF 3PCFA 2BUMB 2BUUA 3MI1A 3PCLM 3PCBA 2BUYA 4ILTA 3LXVM 3PCHM 3LMXM 3N9TA 3PCKA 3TH1A 4WHQB 2BUTA 1EO9A 3T63A 1EOAB 2BUVA 1YKLB 3PCMM 1TMXA 1EOCA 4ILVA 2PCDM 1YKNA 3HJ8A 3MFLA 4WHSB 1DMHA 3PCJM 3HHYA 1YKPA 1YKOB 1S9AA 3LKTM 3PCFM 3MI1M 1YKMB 3MV4A 3T67A 1EOBB 3PCKM 4WHPB 3HHXA 2BOYA 2BUWA 3T63M 3O6RA 2BUXB 3PCNM 3O5UA 3PCIM 3MV6M 3PCGA 3I4VA 2BUQB 2BURA 1DLMA 2BUYB 2BV0A 3HGIA 4WHOB 1EO9B 2BUVB 2BUZA 4WHRB 3T67M 3PCEM 1YKLA 1EOCB 3PCBM 3MI5A 3O32A 1DLQA 3PCGM 3HJQA 3PCLA 1YKPB 3HKPA 3O6JA 3LXVA 3PCHA 3LMXA 1EO2A 1YKMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YKK A;  3MFL M;  2BUU B;  1EOB A;  3PCM A;  3PCC A;  2BUM A;  4WHP A;  2PCD A;  1DLT A;  2XSV A;  2BUT B;  3MV4 M;  4WHQ A;  4WHP D;  3PCA A;  3MI5 M;  1EOA A;  2BUR B;  3LKT A;  3PCD A;  2BUQ A;  2BV0 B;  1YKN B;  3I4Y A;  2XSU A;  5TD3 A;  4WHS A;  4WHO A;  2BUZ B;  4WHR A;  3PCN A;  1YKO A;  3PCI A;  3MV6 A;  3PCC M;  4WHS D;  4WHO D;  2BUW B;  3HJS A;  2AZQ A;  3PCA M;  2BUX A;  3PCD M;  1EO2 B;  3PCJ A;  2XSR A;  1YKK B;  3I51 A;  3PCE A;  4WHR F;  3PCF A;  2BUM B;  2BUU A;  3MI1 A;  3PCL M;  3PCB A;  2BUY A;  4ILT A;  3LXV M;  3PCH M;  3LMX M;  3N9T A;  3PCK A;  3TH1 A;  4WHQ B;  2BUT A;  1EO9 A;  3T63 A;  1EOA B;  2BUV A;  1YKL B;  3PCM M;  1TMX A;  1EOC A;  4ILV A;  2PCD M;  1YKN A;  3HJ8 A;  3MFL A;  4WHS B;  1DMH A;  3PCJ M;  3HHY A;  1YKP A;  1YKO B;  1S9A A;  3LKT M;  3PCF M;  3MI1 M;  1YKM B;  3MV4 A;  3T67 A;  1EOB B;  3PCK M;  4WHP B;  3HHX A;  2BOY A;  2BUW A;  3T63 M;  3O6R A;  2BUX B;  3PCN M;  3O5U A;  3PCI M;  3MV6 M;  3PCG A;  3I4V A;  2BUQ B;  2BUR A;  1DLM A;  2BUY B;  2BV0 A;  3HGI A;  4WHO B;  1EO9 B;  2BUV B;  2BUZ A;  4WHR B;  3T67 M;  3PCE M;  1YKL A;  1EOC B;  3PCB M;  3MI5 A;  3O32 A;  1DLQ A;  3PCG M;  3HJQ A;  3PCL A;  1YKP B;  3HKP A;  3O6J A;  3LXV A;  3PCH A;  3LMX A;  1EO2 A;  1YKM A; 
#chains in the Genus database with same CATH topology
 1YKK A;  3MFL M;  2BUU B;  1EOB A;  3PCM A;  3PCC A;  2BUM A;  4WHP A;  2PCD A;  1DLT A;  2XSV A;  2BUT B;  3MV4 M;  4WHQ A;  4WHP D;  3PCA A;  3MI5 M;  1EOA A;  2BUR B;  3LKT A;  3PCD A;  2BUQ A;  2BV0 B;  1YKN B;  3I4Y A;  2XSU A;  5TD3 A;  4WHS A;  4WHO A;  2BUZ B;  4WHR A;  3PCN A;  1YKO A;  3PCI A;  3MV6 A;  3PCC M;  4WHS D;  4WHO D;  2BUW B;  3HJS A;  2AZQ A;  3PCA M;  2BUX A;  3PCD M;  1EO2 B;  3PCJ A;  2XSR A;  1YKK B;  3I51 A;  3PCE A;  4WHR F;  3PCF A;  2BUM B;  2BUU A;  3MI1 A;  3PCL M;  3PCB A;  2BUY A;  4ILT A;  3LXV M;  3PCH M;  3LMX M;  3N9T A;  3PCK A;  3TH1 A;  4WHQ B;  2BUT A;  1EO9 A;  3T63 A;  1EOA B;  2BUV A;  1YKL B;  3PCM M;  1TMX A;  1EOC A;  4ILV A;  2PCD M;  1YKN A;  3HJ8 A;  3MFL A;  4WHS B;  1DMH A;  3PCJ M;  3HHY A;  1YKP A;  1YKO B;  1S9A A;  3LKT M;  3PCF M;  3MI1 M;  1YKM B;  3MV4 A;  3T67 A;  1EOB B;  3PCK M;  4WHP B;  3HHX A;  2BOY A;  2BUW A;  3T63 M;  3O6R A;  2BUX B;  3PCN M;  3O5U A;  3PCI M;  3MV6 M;  3PCG A;  3I4V A;  2BUQ B;  2BUR A;  1DLM A;  2BUY B;  2BV0 A;  3HGI A;  4WHO B;  1EO9 B;  2BUV B;  2BUZ A;  4WHR B;  3T67 M;  3PCE M;  1YKL A;  1EOC B;  3PCB M;  3MI5 A;  3O32 A;  1DLQ A;  3PCG M;  3HJQ A;  3PCL A;  1YKP B;  3HKP A;  3O6J A;  3LXV A;  3PCH A;  3LMX A;  1EO2 A;  1YKM A; 
#chains in the Genus database with same CATH homology
 1YKK A;  3MFL M;  2BUU B;  1EOB A;  3PCM A;  3PCC A;  2BUM A;  4WHP A;  2PCD A;  1DLT A;  2XSV A;  2BUT B;  3MV4 M;  4WHQ A;  4WHP D;  3PCA A;  3MI5 M;  1EOA A;  2BUR B;  3LKT A;  3PCD A;  2BUQ A;  2BV0 B;  1YKN B;  3I4Y A;  2XSU A;  5TD3 A;  4WHS A;  4WHO A;  2BUZ B;  4WHR A;  3PCN A;  1YKO A;  3PCI A;  3MV6 A;  3PCC M;  4WHS D;  4WHO D;  2BUW B;  3HJS A;  2AZQ A;  3PCA M;  2BUX A;  3PCD M;  1EO2 B;  3PCJ A;  2XSR A;  1YKK B;  3I51 A;  3PCE A;  4WHR F;  3PCF A;  2BUM B;  2BUU A;  3MI1 A;  3PCL M;  3PCB A;  2BUY A;  4ILT A;  3LXV M;  3PCH M;  3LMX M;  3N9T A;  3PCK A;  3TH1 A;  4WHQ B;  2BUT A;  1EO9 A;  3T63 A;  1EOA B;  2BUV A;  1YKL B;  3PCM M;  1TMX A;  1EOC A;  4ILV A;  2PCD M;  1YKN A;  3HJ8 A;  3MFL A;  4WHS B;  1DMH A;  3PCJ M;  3HHY A;  1YKP A;  1YKO B;  1S9A A;  3LKT M;  3PCF M;  3MI1 M;  1YKM B;  3MV4 A;  3T67 A;  1EOB B;  3PCK M;  4WHP B;  3HHX A;  2BOY A;  2BUW A;  3T63 M;  3O6R A;  2BUX B;  3PCN M;  3O5U A;  3PCI M;  3MV6 M;  3PCG A;  3I4V A;  2BUQ B;  2BUR A;  1DLM A;  2BUY B;  2BV0 A;  3HGI A;  4WHO B;  1EO9 B;  2BUV B;  2BUZ A;  4WHR B;  3T67 M;  3PCE M;  1YKL A;  1EOC B;  3PCB M;  3MI5 A;  3O32 A;  1DLQ A;  3PCG M;  3HJQ A;  3PCL A;  1YKP B;  3HKP A;  3O6J A;  3LXV A;  3PCH A;  3LMX A;  1EO2 A;  1YKM A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...