2XVWA

Human serum albumin complexed with dansyl-l-arginine and myristic acid
Total Genus 220
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
220
sequence length
582
structure length
582
Chain Sequence
HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEPERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLECADDRADLAKYICENQDSISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNRRPCFSALEVDETYVPKEFNAETFTFHADICTLSEKEEQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKCCKADDKETCFAEEGKKLVAASQAALG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transport protein
molecule keywords SERUM ALBUMIN
publication title Structural Basis of Binding of Fluorescent, Site-Specific Dansylated Amino Acids to Human Serum Albumin.
pubmed doi rcsb
source organism Homo sapiens
total genus 220
structure length 582
sequence length 582
ec nomenclature
pdb deposition date 2010-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00273 Serum_albumin Serum albumin family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA03
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA02
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA04
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA01
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA06
1.10.246.10 Mainly Alpha Orthogonal Bundle Serum Albumin; Chain A, Domain 1 Serum Albumin; Chain A, Domain 1 2xvwA05
1E7EA 3V03A 1GNIA 1BKEA 5DQFA 1E7AA 4Z69A 3JRYA 4IW1A 4F5UA 1KXPD 3LU7A 3CX9A 1E7FA 1E7CA 5IIXA 4F5VA 2BXFA 2XVVA 4F5SA 4HGMB 2BXBA 1KW2A 3TDLA 1E7GA 2VUFA 5FUOA 2BXPA 1AO6A 3JQZA 4LB2A 1N5UA 5DBYA 3A73A 4HGKA 2BXNA 2XVUA 4IW2A 1LOTA 5HOZA 5IJ5A 3V09A 2BXQA 2BXEA 4E99A 1UORA 2BXMA 4PO0A 1J7EA 2XVQA 1BJ5A 4OT2A 4G03A 4J2VA 4N0UD 4OR0A 5GHKA 2BXAA 4L9QA 1HK4A 1E78A 2XSIA 1HK3A 2VDBA 4LB9A 4LA0A 1E7IA 3B9LA 2BXIA 2XVWA 1H9ZA 1HK5A 1TF0A 2BXCA 5ID7A 1J78A 4ZBQA 3LU8A 4L8UA 3SQJA 4EMXA 5ID9A 2XW1A 1BM0A 3V08A 2BXDA 2BX8A 4N0FD 1HK1A 3LU6A 1O9XA 2YDFA 5IJFA 4K2CA 1HK2A 4F5TA 5IJEA 4LUFA 3UIVA 2BXHA 5IFOA 2I2ZA 2VUEA 4L9KA 2I30A 2BXLA 2BXGA 4LUHA 4K71A 1HA2A 4JK4A 2XW0A 2BXKA 5IIHA 5IIUA 1GNJA 1E7HA 4ZBRA 1E7BA 4BKEA 2BXOA 3B9MA 4S1YA 1MA9A 4G04A
chains in the Genus database with same CATH superfamily
1E7EA 1H5WA 3V03A 2CKXA 2AGHB 3ICXA 1MIVA 3NVMA 2DBUA 1MM8A 2OZBB 1GNIA 1BKEA 5DQFA 2KBZA 1E7AA 4Z69A 2QM6A 3FNMA 1JNBA 3JRYA 3G9KD 3GQXA 4IW1A 2Z8IA 2E0XA 2LOQA 5D7GA 4F5UA 1KXPD 3LU7A 3CX9A 2EFCA 4D7XA 4GDKB 1E7FA 1E7CA 5IIXA 4F5VA 2BXFA 2XVVA 1KDXA 2DYMA 2QMCA 3VQIA 4F5SA 4HGMB 1TXUA 4ZUXV 2BXBA 3FWCC 1KW2A 2NNWA 3TDLA 3ECPA 1E7GA 4OTTA 2VUFA 5FUOA 2BXPA 4TQ0A 1AO6A 3JQZA 2DYOA 2V36A 3NVIA 3H37A 4LB2A 4G01A 1N5UA 5B5TA 2LQHA 5DBYA 3A73A 4HGKA 2BXNA 1MUSA 2XVUA 4IW2A 1LOTA 2JUHA 3M99C 2E0YA 4OTUA 2KWFA 5HOZA 5IJ5A 3V09A 2BXQA 4I9OA 4FJCB 2BXEA 4E99A 1UORA 2BXMA 5GIOA 2DBXA 3SIUB 4PO0A 2ROHA 1J7EA 2XVQA 1BJ5A 4DHXB 1FOUA 4OT2A 4G03A 4J2VA 4N0UD 4OR0A 5GHKA 5GINA 2AJEA 2BXAA 4L9QA 1VFIA 4N3ZA 4ZC6A 1HK4A 1E78A 1LNSA 2K0NA 2XSIA 1HK3A 2Z8KA 1VZSA 3MHSB 2VDBA 4LB9A 4LA0A 4C31B 1E7IA 3B9LA 2BXIA 3KIKA 4BY9C 3A75A 4WA6B 3WHRA 2DBWA 3NVKA 2XVWA 1SB0A 4NAWB 4DM0A 1H9ZA 3GQUA 1HK5A 1TF0A 2BXCA 5ID7A 1MUHA 1J78A 4ZBQA 5BPKA 3LU8A 3H3AA 3WHQA 4L8UA 3SQJA 4EMXA 3SIVB 4GDLB 4W4UB 5ID9A 2XW1A 1BM0A 2XMOA 3FWBC 2LXSA 4Z9OA 3V08A 3W1SA 3NMUA 2NQOA 2BXDA 2OT3A 2BX8A 2EFHA 4N0FD 4M70B 1HK1A 3LU6A 1O9XA 2EFDA 2YDFA 5IJFA 4K2CA 1HK2A 4F5TA 2LQIA 5IJEA 4LUFA 3UIVA 3KJLA 2BXHA 5GIPA 1MIWA 5IFOA 3MHHB 4GDXA 2I2ZA 2VUEA 4L9KA 4TQ1A 2I30A 2QHBA 1NT2B 2BXLA 2BXGA 4LUHA 4ZBKA 3WHSA 4K71A 3PLAA 1HA2A 4JK4A 2XW0A 2BXKA 4ZCGA 1MIYA 2EFEA 5IIHA 4GG2A 2LXTA 3BPJA 5IIUA 2Z8JA 1GNJA 4FIPB 1E7HA 4MBEC 4ZBRA 1IJGA 1E7BA 4BKEA 2BXOA 3B9MA 3GA9L 4S1YA 4FK5B 2DG5A 1MA9A 4G04A 2GUTA
chains in the Genus database with same CATH topology
1E7EA 1H5WA 3V03A 2CKXA 3ICXA 1MIVA 3NVMA 2DBUA 2OZBB 1GNIA 1BKEA 5DQFA 2KBZA 1E7AA 4Z69A 2QM6A 3FNMA 1JNBA 3JRYA 3G9KD 3GQXA 4IW1A 2Z8IA 2E0XA 2LOQA 5D7GA 4F5UA 1KXPD 3LU7A 3CX9A 2EFCA 4GDKB 1E7FA 1E7CA 5IIXA 4F5VA 2BXFA 2XVVA 2DYMA 2QMCA 3VQIA 4F5SA 4HGMB 1TXUA 4ZUXV 2BXBA 3FWCC 1KW2A 2NNWA 3TDLA 1E7GA 4OTTA 2VUFA 5FUOA 2BXPA 4TQ0A 1AO6A 3JQZA 2DYOA 2V36A 3NVIA 3H37A 4LB2A 4G01A 1N5UA 5B5TA 5DBYA 3A73A 4HGKA 2BXNA 2XVUA 4IW2A 1LOTA 2JUHA 3M99C 2E0YA 4OTUA 5HOZA 5IJ5A 3V09A 2BXQA 4FJCB 2BXEA 4E99A 1UORA 2BXMA 5GIOA 2DBXA 3SIUB 4PO0A 2ROHA 1J7EA 2XVQA 1BJ5A 4DHXB 1FOUA 4OT2A 4G03A 4J2VA 4N0UD 4OR0A 5GHKA 5GINA 2AJEA 2BXAA 4L9QA 1VFIA 4N3ZA 4ZC6A 1HK4A 1E78A 1LNSA 2XSIA 1HK3A 2Z8KA 1VZSA 3MHSB 2VDBA 4LB9A 4LA0A 4C31B 1E7IA 3B9LA 2BXIA 3KIKA 4BY9C 3A75A 4WA6B 3WHRA 2DBWA 3NVKA 2XVWA 4NAWB 1H9ZA 3GQUA 1HK5A 1TF0A 2BXCA 5ID7A 1J78A 4ZBQA 5BPKA 3LU8A 3H3AA 3WHQA 4L8UA 3SQJA 4EMXA 3SIVB 4GDLB 4W4UB 5ID9A 2XW1A 1BM0A 2XMOA 3FWBC 4Z9OA 3NMUA 3V08A 3W1SA 2NQOA 2BXDA 2OT3A 2BX8A 2EFHA 4N0FD 4M70B 1HK1A 3LU6A 1O9XA 2EFDA 2YDFA 5IJFA 4K2CA 1HK2A 4F5TA 5IJEA 4LUFA 3UIVA 3KJLA 2BXHA 5GIPA 1MIWA 5IFOA 3MHHB 4GDXA 2I2ZA 2VUEA 4L9KA 4TQ1A 2I30A 2QHBA 1NT2B 2BXLA 2BXGA 4LUHA 4ZBKA 3WHSA 4K71A 3PLAA 1HA2A 4JK4A 2XW0A 2BXKA 4ZCGA 1MIYA 2EFEA 5IIHA 4GG2A 5IIUA 2Z8JA 1GNJA 4FIPB 1E7HA 4MBEC 4ZBRA 1IJGA 1E7BA 4BKEA 2BXOA 3B9MA 3GA9L 4S1YA 4FK5B 2DG5A 1MA9A 4G04A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E7E A;  3V03 A;  1GNI A;  1BKE A;  5DQF A;  1E7A A;  4Z69 A;  3JRY A;  4IW1 A;  4F5U A;  1KXP D;  3LU7 A;  3CX9 A;  1E7F A;  1E7C A;  5IIX A;  4F5V A;  2BXF A;  2XVV A;  4F5S A;  4HGM B;  2BXB A;  1KW2 A;  3TDL A;  1E7G A;  2VUF A;  5FUO A;  2BXP A;  1AO6 A;  3JQZ A;  4LB2 A;  1N5U A;  5DBY A;  3A73 A;  4HGK A;  2BXN A;  2XVU A;  4IW2 A;  1LOT A;  5HOZ A;  5IJ5 A;  3V09 A;  2BXQ A;  2BXE A;  4E99 A;  1UOR A;  2BXM A;  4PO0 A;  1J7E A;  2XVQ A;  1BJ5 A;  4OT2 A;  4G03 A;  4J2V A;  4N0U D;  4OR0 A;  5GHK A;  2BXA A;  4L9Q A;  1HK4 A;  1E78 A;  2XSI A;  1HK3 A;  2VDB A;  4LB9 A;  4LA0 A;  1E7I A;  3B9L A;  2BXI A;  2XVW A;  1H9Z A;  1HK5 A;  1TF0 A;  2BXC A;  5ID7 A;  1J78 A;  4ZBQ A;  3LU8 A;  4L8U A;  3SQJ A;  4EMX A;  5ID9 A;  2XW1 A;  1BM0 A;  3V08 A;  2BXD A;  2BX8 A;  4N0F D;  1HK1 A;  3LU6 A;  1O9X A;  2YDF A;  5IJF A;  4K2C A;  1HK2 A;  4F5T A;  5IJE A;  4LUF A;  3UIV A;  2BXH A;  5IFO A;  2I2Z A;  2VUE A;  4L9K A;  2I30 A;  2BXL A;  2BXG A;  4LUH A;  4K71 A;  1HA2 A;  4JK4 A;  2XW0 A;  2BXK A;  5IIH A;  5IIU A;  1GNJ A;  1E7H A;  4ZBR A;  1E7B A;  4BKE A;  2BXO A;  3B9M A;  4S1Y A;  1MA9 A;  4G04 A; 
#chains in the Genus database with same CATH topology
 1E7E A;  1H5W A;  3V03 A;  2CKX A;  2AGH B;  3ICX A;  1MIV A;  3NVM A;  2DBU A;  1MM8 A;  2OZB B;  1GNI A;  1BKE A;  5DQF A;  2KBZ A;  1E7A A;  4Z69 A;  2QM6 A;  3FNM A;  1JNB A;  3JRY A;  3G9K D;  3GQX A;  4IW1 A;  2Z8I A;  2E0X A;  2LOQ A;  5D7G A;  4F5U A;  1KXP D;  3LU7 A;  3CX9 A;  2EFC A;  4D7X A;  4GDK B;  1E7F A;  1E7C A;  5IIX A;  4F5V A;  2BXF A;  2XVV A;  1KDX A;  2DYM A;  2QMC A;  3VQI A;  4F5S A;  4HGM B;  1TXU A;  4ZUX V;  2BXB A;  3FWC C;  1KW2 A;  2NNW A;  3TDL A;  3ECP A;  1E7G A;  4OTT A;  2VUF A;  5FUO A;  2BXP A;  4TQ0 A;  1AO6 A;  3JQZ A;  2DYO A;  2V36 A;  3NVI A;  3H37 A;  4LB2 A;  4G01 A;  1N5U A;  5B5T A;  2LQH A;  5DBY A;  3A73 A;  4HGK A;  2BXN A;  1MUS A;  2XVU A;  4IW2 A;  1LOT A;  2JUH A;  3M99 C;  2E0Y A;  4OTU A;  2KWF A;  5HOZ A;  5IJ5 A;  3V09 A;  2BXQ A;  4I9O A;  4FJC B;  2BXE A;  4E99 A;  1UOR A;  2BXM A;  5GIO A;  2DBX A;  3SIU B;  4PO0 A;  2ROH A;  1J7E A;  2XVQ A;  1BJ5 A;  4DHX B;  1FOU A;  4OT2 A;  4G03 A;  4J2V A;  4N0U D;  4OR0 A;  5GHK A;  5GIN A;  2AJE A;  2BXA A;  4L9Q A;  1VFI A;  4N3Z A;  4ZC6 A;  1HK4 A;  1E78 A;  1LNS A;  2K0N A;  2XSI A;  1HK3 A;  2Z8K A;  1VZS A;  3MHS B;  2VDB A;  4LB9 A;  4LA0 A;  4C31 B;  1E7I A;  3B9L A;  2BXI A;  3KIK A;  4BY9 C;  3A75 A;  4WA6 B;  3WHR A;  2DBW A;  3NVK A;  2XVW A;  1SB0 A;  4NAW B;  4DM0 A;  1H9Z A;  3GQU A;  1HK5 A;  1TF0 A;  2BXC A;  5ID7 A;  1MUH A;  1J78 A;  4ZBQ A;  5BPK A;  3LU8 A;  3H3A A;  3WHQ A;  4L8U A;  3SQJ A;  4EMX A;  3SIV B;  4GDL B;  4W4U B;  5ID9 A;  2XW1 A;  1BM0 A;  2XMO A;  3FWB C;  2LXS A;  4Z9O A;  3V08 A;  3W1S A;  3NMU A;  2NQO A;  2BXD A;  2OT3 A;  2BX8 A;  2EFH A;  4N0F D;  4M70 B;  1HK1 A;  3LU6 A;  1O9X A;  2EFD A;  2YDF A;  5IJF A;  4K2C A;  1HK2 A;  4F5T A;  2LQI A;  5IJE A;  4LUF A;  3UIV A;  3KJL A;  2BXH A;  5GIP A;  1MIW A;  5IFO A;  3MHH B;  4GDX A;  2I2Z A;  2VUE A;  4L9K A;  4TQ1 A;  2I30 A;  2QHB A;  1NT2 B;  2BXL A;  2BXG A;  4LUH A;  4ZBK A;  3WHS A;  4K71 A;  3PLA A;  1HA2 A;  4JK4 A;  2XW0 A;  2BXK A;  4ZCG A;  1MIY A;  2EFE A;  5IIH A;  4GG2 A;  2LXT A;  3BPJ A;  5IIU A;  2Z8J A;  1GNJ A;  4FIP B;  1E7H A;  4MBE C;  4ZBR A;  1IJG A;  1E7B A;  4BKE A;  2BXO A;  3B9M A;  3GA9 L;  4S1Y A;  4FK5 B;  2DG5 A;  1MA9 A;  4G04 A;  2GUT A; 
#chains in the Genus database with same CATH homology
 1E7E A;  1H5W A;  3V03 A;  2CKX A;  3ICX A;  1MIV A;  3NVM A;  2DBU A;  2OZB B;  1GNI A;  1BKE A;  5DQF A;  2KBZ A;  1E7A A;  4Z69 A;  2QM6 A;  3FNM A;  1JNB A;  3JRY A;  3G9K D;  3GQX A;  4IW1 A;  2Z8I A;  2E0X A;  2LOQ A;  5D7G A;  4F5U A;  1KXP D;  3LU7 A;  3CX9 A;  2EFC A;  4GDK B;  1E7F A;  1E7C A;  5IIX A;  4F5V A;  2BXF A;  2XVV A;  2DYM A;  2QMC A;  3VQI A;  4F5S A;  4HGM B;  1TXU A;  4ZUX V;  2BXB A;  3FWC C;  1KW2 A;  2NNW A;  3TDL A;  1E7G A;  4OTT A;  2VUF A;  5FUO A;  2BXP A;  4TQ0 A;  1AO6 A;  3JQZ A;  2DYO A;  2V36 A;  3NVI A;  3H37 A;  4LB2 A;  4G01 A;  1N5U A;  5B5T A;  5DBY A;  3A73 A;  4HGK A;  2BXN A;  2XVU A;  4IW2 A;  1LOT A;  2JUH A;  3M99 C;  2E0Y A;  4OTU A;  5HOZ A;  5IJ5 A;  3V09 A;  2BXQ A;  4FJC B;  2BXE A;  4E99 A;  1UOR A;  2BXM A;  5GIO A;  2DBX A;  3SIU B;  4PO0 A;  2ROH A;  1J7E A;  2XVQ A;  1BJ5 A;  4DHX B;  1FOU A;  4OT2 A;  4G03 A;  4J2V A;  4N0U D;  4OR0 A;  5GHK A;  5GIN A;  2AJE A;  2BXA A;  4L9Q A;  1VFI A;  4N3Z A;  4ZC6 A;  1HK4 A;  1E78 A;  1LNS A;  2XSI A;  1HK3 A;  2Z8K A;  1VZS A;  3MHS B;  2VDB A;  4LB9 A;  4LA0 A;  4C31 B;  1E7I A;  3B9L A;  2BXI A;  3KIK A;  4BY9 C;  3A75 A;  4WA6 B;  3WHR A;  2DBW A;  3NVK A;  2XVW A;  4NAW B;  1H9Z A;  3GQU A;  1HK5 A;  1TF0 A;  2BXC A;  5ID7 A;  1J78 A;  4ZBQ A;  5BPK A;  3LU8 A;  3H3A A;  3WHQ A;  4L8U A;  3SQJ A;  4EMX A;  3SIV B;  4GDL B;  4W4U B;  5ID9 A;  2XW1 A;  1BM0 A;  2XMO A;  3FWB C;  4Z9O A;  3NMU A;  3V08 A;  3W1S A;  2NQO A;  2BXD A;  2OT3 A;  2BX8 A;  2EFH A;  4N0F D;  4M70 B;  1HK1 A;  3LU6 A;  1O9X A;  2EFD A;  2YDF A;  5IJF A;  4K2C A;  1HK2 A;  4F5T A;  5IJE A;  4LUF A;  3UIV A;  3KJL A;  2BXH A;  5GIP A;  1MIW A;  5IFO A;  3MHH B;  4GDX A;  2I2Z A;  2VUE A;  4L9K A;  4TQ1 A;  2I30 A;  2QHB A;  1NT2 B;  2BXL A;  2BXG A;  4LUH A;  4ZBK A;  3WHS A;  4K71 A;  3PLA A;  1HA2 A;  4JK4 A;  2XW0 A;  2BXK A;  4ZCG A;  1MIY A;  2EFE A;  5IIH A;  4GG2 A;  5IIU A;  2Z8J A;  1GNJ A;  4FIP B;  1E7H A;  4MBE C;  4ZBR A;  1IJG A;  1E7B A;  4BKE A;  2BXO A;  3B9M A;  3GA9 L;  4S1Y A;  4FK5 B;  2DG5 A;  1MA9 A;  4G04 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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