2XZ6A

Mtset-modified y53c mutant of aplysia achbp
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
205
structure length
205
Chain Sequence
QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYCEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Receptor
source organism Aplysia californica
publication title Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein
pubmed doi rcsb
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
total genus 48
structure length 205
sequence length 205
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2010-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2xz6A00
4UY2A 2XQ8A 5LXBA 3SH1A 3IGQA 2YKSA 4TWFA 4B5DA 4XK9A 3GUAA 3PMZA 3U8MA 2ZJUA 3PEOA 4ZJTA 4QAAA 2BJ0A 3WTNA 4ZK4A 5L4HA 4NZBA 2XQ9A 2QC1B 4ZZCA 3TLWA 3U8NA 4AFGA 4IL4A 4DBMA 5AFKA 5LG3A 4AFTA 4HFIA 3WTMA 2BG9C 4HFEA 4QH4A 3WTLA 5AFNA 4TWDA 4XHEA 3RHWA 4COFA 5BP0A 2XZ6A 4AFHA 4QH1A 3WIPA 4ILBA 4ZR6A 4EZ1A 5AFLA 4LMLA 2BG9B 2BYSA 3U8JA 4HFCA 2Y56A 4IREA 3P4WA 4LMKA 4TNWA 2XQ7A 4ZZBA 5BW2A 4UXUA 3ZDHA 1UV6A 3WTKA 2Y58A 2W8GA 5HEHA 4TWHA 2BG9A 5AINA 2YN6A 3UU3A 5SYOA 3T4MA 2VL0A 3UU6A 4ILAA 5CO5A 2WZYA 2PGZA 3WTOA 3C84A 4D01A 3WTIA 4ZJSA 5HEGA 3RIFA 4UM3P 4A97A 3JAFA 2BR7A 2BR8A 2BYPA 3SIOA 4PIRA 5L47A 3EI0A 2BYRA 1I9BA 5AFMB 3U8LA 2Y57A 4A98A 3SQ6A 2XYSA 2PH9A 3TLUA 3WTHA 1UW6A 2Y54A 3RQUA 4BFQA 5HEOA 4UM3S 2WNJA 3P50A 3JADA 2XYTA 3EHZA 4UM3A 2XNTA 4NPPA 4UM1A 4LMJA 5AFJA 2W8FA 2XQ4A 3UU5A 5KE4A 3RI5A 4BQTA 3C79A 2XZ5A 5J0ZA 2XNUA 3ZKRA 4ALXA 3U8KA 2WNLA 4HFDA 5KZUA 2BG9E 4FRRA 3TLSA 5J5FA 5J5IA 3JAEA 4QACA 3UU4A 5IUXA 3LSVA 4TNVA 4QABA 3SQ9A 5J5GA 3ZDGA 5JMEA 2Y7YA 3TLTA 5AFHA 5FJVA 2X00D 4ZRUA 5CFBA 2X00A 4HFBA 4HQPA 2WN9A 4ILCA 2YMDA 5J5HA 5AFMA 5HEJA 3UQ7A 4HFHA 3EAMA 2XQ3A 2ZJVA 3RQWA 3UU8A 2XQ5A 5L4EA 2BYNA 5TVCA 2BYQA 4Z91A 2YOEA 3WTJA 3UUBA 4IL9A 2XNVA 1UX2A 2UZ6A 2XQ6A 2WNCA 2C9TA 4ZK1A 5BRXA 4Z90A 2YMEA 5HEUA 3TLVA 4F8HA 3UQ4A 2XQAA 4WV9A 5HCMA 4X5TA 5HCJA 3RIAA 4QH5A
chains in the Genus database with same CATH superfamily
4UY2A 2XQ8A 5LXBA 3SH1A 3IGQA 2YKSA 4TWFA 4B5DA 4XK9A 3GUAA 3PMZA 3U8MA 2ZJUA 3PEOA 4ZJTA 4QAAA 2BJ0A 3WTNA 4ZK4A 5L4HA 4NZBA 2XQ9A 2QC1B 4ZZCA 3TLWA 3U8NA 4AFGA 4IL4A 4DBMA 5AFKA 5LG3A 4AFTA 4HFIA 3WTMA 2BG9C 4HFEA 4QH4A 3WTLA 5AFNA 4TWDA 4XHEA 3RHWA 4COFA 5BP0A 2XZ6A 4AFHA 4QH1A 3WIPA 4ILBA 4ZR6A 4EZ1A 5AFLA 4LMLA 2BG9B 2BYSA 3U8JA 4HFCA 2Y56A 4IREA 3P4WA 4LMKA 4TNWA 2XQ7A 4ZZBA 5BW2A 4UXUA 3ZDHA 1UV6A 3WTKA 2Y58A 2W8GA 5HEHA 4TWHA 2BG9A 5AINA 2YN6A 3UU3A 5SYOA 3T4MA 2VL0A 3UU6A 4ILAA 5CO5A 2WZYA 2PGZA 3WTOA 3C84A 4D01A 3WTIA 4ZJSA 5HEGA 3RIFA 4UM3P 4A97A 3JAFA 2BR7A 2BR8A 2BYPA 3SIOA 4PIRA 5L47A 3EI0A 2BYRA 1I9BA 5AFMB 3U8LA 2Y57A 4A98A 3SQ6A 2XYSA 2PH9A 3TLUA 3WTHA 1UW6A 2Y54A 3RQUA 4BFQA 5HEOA 4UM3S 2WNJA 3P50A 3JADA 2XYTA 3EHZA 4UM3A 2XNTA 4NPPA 4UM1A 4LMJA 5AFJA 2W8FA 2XQ4A 3UU5A 5KE4A 3RI5A 4BQTA 3C79A 2XZ5A 5J0ZA 2XNUA 3ZKRA 4ALXA 3U8KA 2WNLA 4HFDA 5KZUA 2BG9E 4FRRA 3TLSA 5J5FA 5J5IA 3JAEA 4QACA 3UU4A 5IUXA 3LSVA 4TNVA 4QABA 3SQ9A 5J5GA 3ZDGA 5JMEA 2Y7YA 3TLTA 5AFHA 5FJVA 2X00D 4ZRUA 5CFBA 2X00A 4HFBA 4HQPA 2WN9A 4ILCA 2YMDA 5J5HA 5AFMA 5HEJA 3UQ7A 4HFHA 3EAMA 2XQ3A 2ZJVA 3RQWA 3UU8A 2XQ5A 5L4EA 2BYNA 5TVCA 2BYQA 4Z91A 2YOEA 3WTJA 3UUBA 4IL9A 2XNVA 1UX2A 2UZ6A 2XQ6A 2WNCA 2C9TA 4ZK1A 5BRXA 4Z90A 2YMEA 5HEUA 3TLVA 4F8HA 3UQ4A 2XQAA 4WV9A 5HCMA 4X5TA 5HCJA 3RIAA 4QH5A
chains in the Genus database with same CATH topology
4UY2A 2XQ8A 5LXBA 3SH1A 3IGQA 2YKSA 4TWFA 4B5DA 4XK9A 3GUAA 3PMZA 3U8MA 2ZJUA 3PEOA 4ZJTA 4QAAA 2BJ0A 3WTNA 4ZK4A 5L4HA 4NZBA 2XQ9A 2QC1B 4ZZCA 3TLWA 3U8NA 4AFGA 4IL4A 4DBMA 5AFKA 5LG3A 4AFTA 4HFIA 3WTMA 2BG9C 4HFEA 4QH4A 3WTLA 5AFNA 4TWDA 4XHEA 3RHWA 4COFA 5BP0A 2XZ6A 4AFHA 4QH1A 3WIPA 4ILBA 4ZR6A 4EZ1A 5AFLA 4LMLA 2BG9B 2BYSA 3U8JA 4HFCA 2Y56A 4IREA 3P4WA 4LMKA 4TNWA 2XQ7A 4ZZBA 5BW2A 4UXUA 3ZDHA 1UV6A 3WTKA 2Y58A 2W8GA 5HEHA 4TWHA 2BG9A 5AINA 2YN6A 3UU3A 5SYOA 3T4MA 2VL0A 3UU6A 4ILAA 5CO5A 2WZYA 2PGZA 3WTOA 3C84A 4D01A 3WTIA 4ZJSA 5HEGA 3RIFA 4UM3P 4A97A 3JAFA 2BR7A 2BR8A 2BYPA 3SIOA 4PIRA 5L47A 3EI0A 2BYRA 1I9BA 5AFMB 3U8LA 2Y57A 4A98A 3SQ6A 2XYSA 2PH9A 3TLUA 3WTHA 1UW6A 2Y54A 3RQUA 4BFQA 5HEOA 4UM3S 2WNJA 3P50A 3JADA 2XYTA 3EHZA 4UM3A 2XNTA 4NPPA 4UM1A 4LMJA 5AFJA 2W8FA 2XQ4A 3UU5A 5KE4A 3RI5A 4BQTA 3C79A 2XZ5A 5J0ZA 2XNUA 3ZKRA 4ALXA 3U8KA 2WNLA 4HFDA 5KZUA 2BG9E 4FRRA 3TLSA 5J5FA 5J5IA 3JAEA 4QACA 3UU4A 5IUXA 3LSVA 4TNVA 4QABA 3SQ9A 5J5GA 3ZDGA 5JMEA 2Y7YA 3TLTA 5AFHA 5FJVA 2X00D 4ZRUA 5CFBA 2X00A 4HFBA 4HQPA 2WN9A 4ILCA 2YMDA 5J5HA 5AFMA 5HEJA 3UQ7A 4HFHA 3EAMA 2XQ3A 2ZJVA 3RQWA 3UU8A 2XQ5A 5L4EA 2BYNA 5TVCA 2BYQA 4Z91A 2YOEA 3WTJA 3UUBA 4IL9A 2XNVA 1UX2A 2UZ6A 2XQ6A 2WNCA 2C9TA 4ZK1A 5BRXA 4Z90A 2YMEA 5HEUA 3TLVA 4F8HA 3UQ4A 2XQAA 4WV9A 5HCMA 4X5TA 5HCJA 3RIAA 4QH5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4UY2 A;  2XQ8 A;  5LXB A;  3SH1 A;  3IGQ A;  2YKS A;  4TWF A;  4B5D A;  4XK9 A;  3GUA A;  3PMZ A;  3U8M A;  2ZJU A;  3PEO A;  4ZJT A;  4QAA A;  2BJ0 A;  3WTN A;  4ZK4 A;  5L4H A;  4NZB A;  2XQ9 A;  2QC1 B;  4ZZC A;  3TLW A;  3U8N A;  4AFG A;  4IL4 A;  4DBM A;  5AFK A;  5LG3 A;  4AFT A;  4HFI A;  3WTM A;  2BG9 C;  4HFE A;  4QH4 A;  3WTL A;  5AFN A;  4TWD A;  4XHE A;  3RHW A;  4COF A;  5BP0 A;  2XZ6 A;  4AFH A;  4QH1 A;  3WIP A;  4ILB A;  4ZR6 A;  4EZ1 A;  5AFL A;  4LML A;  2BG9 B;  2BYS A;  3U8J A;  4HFC A;  2Y56 A;  4IRE A;  3P4W A;  4LMK A;  4TNW A;  2XQ7 A;  4ZZB A;  5BW2 A;  4UXU A;  3ZDH A;  1UV6 A;  3WTK A;  2Y58 A;  2W8G A;  5HEH A;  4TWH A;  2BG9 A;  5AIN A;  2YN6 A;  3UU3 A;  5SYO A;  3T4M A;  2VL0 A;  3UU6 A;  4ILA A;  5CO5 A;  2WZY A;  2PGZ A;  3WTO A;  3C84 A;  4D01 A;  3WTI A;  4ZJS A;  5HEG A;  3RIF A;  4UM3 P;  4A97 A;  3JAF A;  2BR7 A;  2BR8 A;  2BYP A;  3SIO A;  4PIR A;  5L47 A;  3EI0 A;  2BYR A;  1I9B A;  5AFM B;  3U8L A;  2Y57 A;  4A98 A;  3SQ6 A;  2XYS A;  2PH9 A;  3TLU A;  3WTH A;  1UW6 A;  2Y54 A;  3RQU A;  4BFQ A;  5HEO A;  4UM3 S;  2WNJ A;  3P50 A;  3JAD A;  2XYT A;  3EHZ A;  4UM3 A;  2XNT A;  4NPP A;  4UM1 A;  4LMJ A;  5AFJ A;  2W8F A;  2XQ4 A;  3UU5 A;  5KE4 A;  3RI5 A;  4BQT A;  3C79 A;  2XZ5 A;  5J0Z A;  2XNU A;  3ZKR A;  4ALX A;  3U8K A;  2WNL A;  4HFD A;  5KZU A;  2BG9 E;  4FRR A;  3TLS A;  5J5F A;  5J5I A;  3JAE A;  4QAC A;  3UU4 A;  5IUX A;  3LSV A;  4TNV A;  4QAB A;  3SQ9 A;  5J5G A;  3ZDG A;  5JME A;  2Y7Y A;  3TLT A;  5AFH A;  5FJV A;  2X00 D;  4ZRU A;  5CFB A;  2X00 A;  4HFB A;  4HQP A;  2WN9 A;  4ILC A;  2YMD A;  5J5H A;  5AFM A;  5HEJ A;  3UQ7 A;  4HFH A;  3EAM A;  2XQ3 A;  2ZJV A;  3RQW A;  3UU8 A;  2XQ5 A;  5L4E A;  2BYN A;  5TVC A;  2BYQ A;  4Z91 A;  2YOE A;  3WTJ A;  3UUB A;  4IL9 A;  2XNV A;  1UX2 A;  2UZ6 A;  2XQ6 A;  2WNC A;  2C9T A;  4ZK1 A;  5BRX A;  4Z90 A;  2YME A;  5HEU A;  3TLV A;  4F8H A;  3UQ4 A;  2XQA A;  4WV9 A;  5HCM A;  4X5T A;  5HCJ A;  3RIA A;  4QH5 A; 
#chains in the Genus database with same CATH topology
 4UY2 A;  2XQ8 A;  5LXB A;  3SH1 A;  3IGQ A;  2YKS A;  4TWF A;  4B5D A;  4XK9 A;  3GUA A;  3PMZ A;  3U8M A;  2ZJU A;  3PEO A;  4ZJT A;  4QAA A;  2BJ0 A;  3WTN A;  4ZK4 A;  5L4H A;  4NZB A;  2XQ9 A;  2QC1 B;  4ZZC A;  3TLW A;  3U8N A;  4AFG A;  4IL4 A;  4DBM A;  5AFK A;  5LG3 A;  4AFT A;  4HFI A;  3WTM A;  2BG9 C;  4HFE A;  4QH4 A;  3WTL A;  5AFN A;  4TWD A;  4XHE A;  3RHW A;  4COF A;  5BP0 A;  2XZ6 A;  4AFH A;  4QH1 A;  3WIP A;  4ILB A;  4ZR6 A;  4EZ1 A;  5AFL A;  4LML A;  2BG9 B;  2BYS A;  3U8J A;  4HFC A;  2Y56 A;  4IRE A;  3P4W A;  4LMK A;  4TNW A;  2XQ7 A;  4ZZB A;  5BW2 A;  4UXU A;  3ZDH A;  1UV6 A;  3WTK A;  2Y58 A;  2W8G A;  5HEH A;  4TWH A;  2BG9 A;  5AIN A;  2YN6 A;  3UU3 A;  5SYO A;  3T4M A;  2VL0 A;  3UU6 A;  4ILA A;  5CO5 A;  2WZY A;  2PGZ A;  3WTO A;  3C84 A;  4D01 A;  3WTI A;  4ZJS A;  5HEG A;  3RIF A;  4UM3 P;  4A97 A;  3JAF A;  2BR7 A;  2BR8 A;  2BYP A;  3SIO A;  4PIR A;  5L47 A;  3EI0 A;  2BYR A;  1I9B A;  5AFM B;  3U8L A;  2Y57 A;  4A98 A;  3SQ6 A;  2XYS A;  2PH9 A;  3TLU A;  3WTH A;  1UW6 A;  2Y54 A;  3RQU A;  4BFQ A;  5HEO A;  4UM3 S;  2WNJ A;  3P50 A;  3JAD A;  2XYT A;  3EHZ A;  4UM3 A;  2XNT A;  4NPP A;  4UM1 A;  4LMJ A;  5AFJ A;  2W8F A;  2XQ4 A;  3UU5 A;  5KE4 A;  3RI5 A;  4BQT A;  3C79 A;  2XZ5 A;  5J0Z A;  2XNU A;  3ZKR A;  4ALX A;  3U8K A;  2WNL A;  4HFD A;  5KZU A;  2BG9 E;  4FRR A;  3TLS A;  5J5F A;  5J5I A;  3JAE A;  4QAC A;  3UU4 A;  5IUX A;  3LSV A;  4TNV A;  4QAB A;  3SQ9 A;  5J5G A;  3ZDG A;  5JME A;  2Y7Y A;  3TLT A;  5AFH A;  5FJV A;  2X00 D;  4ZRU A;  5CFB A;  2X00 A;  4HFB A;  4HQP A;  2WN9 A;  4ILC A;  2YMD A;  5J5H A;  5AFM A;  5HEJ A;  3UQ7 A;  4HFH A;  3EAM A;  2XQ3 A;  2ZJV A;  3RQW A;  3UU8 A;  2XQ5 A;  5L4E A;  2BYN A;  5TVC A;  2BYQ A;  4Z91 A;  2YOE A;  3WTJ A;  3UUB A;  4IL9 A;  2XNV A;  1UX2 A;  2UZ6 A;  2XQ6 A;  2WNC A;  2C9T A;  4ZK1 A;  5BRX A;  4Z90 A;  2YME A;  5HEU A;  3TLV A;  4F8H A;  3UQ4 A;  2XQA A;  4WV9 A;  5HCM A;  4X5T A;  5HCJ A;  3RIA A;  4QH5 A; 
#chains in the Genus database with same CATH homology
 4UY2 A;  2XQ8 A;  5LXB A;  3SH1 A;  3IGQ A;  2YKS A;  4TWF A;  4B5D A;  4XK9 A;  3GUA A;  3PMZ A;  3U8M A;  2ZJU A;  3PEO A;  4ZJT A;  4QAA A;  2BJ0 A;  3WTN A;  4ZK4 A;  5L4H A;  4NZB A;  2XQ9 A;  2QC1 B;  4ZZC A;  3TLW A;  3U8N A;  4AFG A;  4IL4 A;  4DBM A;  5AFK A;  5LG3 A;  4AFT A;  4HFI A;  3WTM A;  2BG9 C;  4HFE A;  4QH4 A;  3WTL A;  5AFN A;  4TWD A;  4XHE A;  3RHW A;  4COF A;  5BP0 A;  2XZ6 A;  4AFH A;  4QH1 A;  3WIP A;  4ILB A;  4ZR6 A;  4EZ1 A;  5AFL A;  4LML A;  2BG9 B;  2BYS A;  3U8J A;  4HFC A;  2Y56 A;  4IRE A;  3P4W A;  4LMK A;  4TNW A;  2XQ7 A;  4ZZB A;  5BW2 A;  4UXU A;  3ZDH A;  1UV6 A;  3WTK A;  2Y58 A;  2W8G A;  5HEH A;  4TWH A;  2BG9 A;  5AIN A;  2YN6 A;  3UU3 A;  5SYO A;  3T4M A;  2VL0 A;  3UU6 A;  4ILA A;  5CO5 A;  2WZY A;  2PGZ A;  3WTO A;  3C84 A;  4D01 A;  3WTI A;  4ZJS A;  5HEG A;  3RIF A;  4UM3 P;  4A97 A;  3JAF A;  2BR7 A;  2BR8 A;  2BYP A;  3SIO A;  4PIR A;  5L47 A;  3EI0 A;  2BYR A;  1I9B A;  5AFM B;  3U8L A;  2Y57 A;  4A98 A;  3SQ6 A;  2XYS A;  2PH9 A;  3TLU A;  3WTH A;  1UW6 A;  2Y54 A;  3RQU A;  4BFQ A;  5HEO A;  4UM3 S;  2WNJ A;  3P50 A;  3JAD A;  2XYT A;  3EHZ A;  4UM3 A;  2XNT A;  4NPP A;  4UM1 A;  4LMJ A;  5AFJ A;  2W8F A;  2XQ4 A;  3UU5 A;  5KE4 A;  3RI5 A;  4BQT A;  3C79 A;  2XZ5 A;  5J0Z A;  2XNU A;  3ZKR A;  4ALX A;  3U8K A;  2WNL A;  4HFD A;  5KZU A;  2BG9 E;  4FRR A;  3TLS A;  5J5F A;  5J5I A;  3JAE A;  4QAC A;  3UU4 A;  5IUX A;  3LSV A;  4TNV A;  4QAB A;  3SQ9 A;  5J5G A;  3ZDG A;  5JME A;  2Y7Y A;  3TLT A;  5AFH A;  5FJV A;  2X00 D;  4ZRU A;  5CFB A;  2X00 A;  4HFB A;  4HQP A;  2WN9 A;  4ILC A;  2YMD A;  5J5H A;  5AFM A;  5HEJ A;  3UQ7 A;  4HFH A;  3EAM A;  2XQ3 A;  2ZJV A;  3RQW A;  3UU8 A;  2XQ5 A;  5L4E A;  2BYN A;  5TVC A;  2BYQ A;  4Z91 A;  2YOE A;  3WTJ A;  3UUB A;  4IL9 A;  2XNV A;  1UX2 A;  2UZ6 A;  2XQ6 A;  2WNC A;  2C9T A;  4ZK1 A;  5BRX A;  4Z90 A;  2YME A;  5HEU A;  3TLV A;  4F8H A;  3UQ4 A;  2XQA A;  4WV9 A;  5HCM A;  4X5T A;  5HCJ A;  3RIA A;  4QH5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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