2XZ6A

Mtset-modified y53c mutant of aplysia achbp
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
205
structure length
205
Chain Sequence
b'QANLMRLKSDLFNRSPMYPGPTKDDPLTVTLGFTLQDIVKVDSSTNEVDLVYCEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLSPQIAVVTHDGSVMFIPAQRLSFMCDPTGVDSEEGVTCAVKFGSWVYSGFEIDLKTDTDQVDLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein
pubmed doi rcsb
molecule keywords SOLUBLE ACETYLCHOLINE RECEPTOR
source organism Aplysia californica
molecule tags Receptor
total genus 48
structure length 205
sequence length 205
chains with identical sequence B, C, D, E, F, G, H, I, J
ec nomenclature
pdb deposition date 2010-11-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 2xz6A00
2Y58A 4AFTA 4UM3S 3WTJA 1UV6A 3EI0A 4TNWA 2YN6A 4UM3A 2BG9C 3UU4A 4ALXA 5J5HA 4PIRA 2ZJVA 2W8FA 3WTIA 5BRXA 4ZZCA 5J0ZA 3JAEA 5HCMA 4HFIA 2XNVA 5SYOA 4HFCA 3U8KA 3UQ4A 4Z91A 5BP0A 4WV9A 3P4WA 3JAFA 3UU5A 3PMZA 4TWDA 3GUAA 3SQ9A 5HEHA 3SIOA 2YOEA 3IGQA 3RIAA 4HFDA 4COFA 4BFQA 5KZUA 5HEJA 2WNJA 1UW6A 3PEOA 5J5GA 4XK9A 4LMKA 2Y54A 3RQUA 2WNLA 3UU8A 4BQTA 4HFBA 4IL9A 4ZK1A 3WTMA 5KE4A 3P50A 3WTHA 5J5FA 4IREA 2BJ0A 2YKSA 5HEUA 4FRRA 2BYNA 2XQ9A 3SH1A 3T4MA 4ZJTA 2X00D 3LSVA 2BYSA 5LXBA 2XQAA 4A98A 2BG9E 4D01A 4TWFA 3UU6A 5AFJA 2XQ8A 4X5TA 2XZ5A 3ZKRA 4NPPA 2BYPA 5JMEA 3TLWA 4HFHA 3WTNA 2XNTA 4EZ1A 2VL0A 5CFBA 4F8HA 4QAAA 3C79A 3U8MA 2ZJUA 5HEGA 2WN9A 4ILBA 4AFHA 5AFLA 2W8GA 3ZDGA 3TLVA 3WTOA 4ZK4A 2BYRA 5AFKA 5BW2A 2QC1B 3RHWA 4UY2A 5IUXA 3TLTA 2Y7YA 5AFNA 4UM3P 3RIFA 5L47A 2XYTA 3TLUA 5AFMB 4LMJA 5HEOA 2XYSA 3RI5A 2PGZA 4Z90A 5TVCA 4ZJSA 5AFMA 2BR7A 5L4HA 2Y57A 2XQ4A 2XQ7A 2WZYA 5LG3A 4ILAA 4LMLA 5AFHA 2XQ5A 3RQWA 4ILCA 5FJVA 3SQ6A 4HQPA 4QABA 2YMEA 4UXUA 4ZZBA 4QACA 1I9BA 2XNUA 3ZDHA 2YMDA 3JADA 4UM1A 2XZ6A 5L4EA 2Y56A 2UZ6A 2XQ3A 5J5IA 3U8JA 1UX2A 2X00A 2BR8A 4DBMA 3EHZA 4B5DA 3UUBA 4NZBA 4ZRUA 2PH9A 4A97A 2XQ6A 3U8LA 3C84A 2BG9B 3UU3A 5AINA 4QH5A 4TWHA 2BG9A 4QH4A 3U8NA 3WTKA 2C9TA 3UQ7A 3TLSA 2WNCA 3WIPA 3EAMA 5CO5A 5HCJA 4XHEA 4IL4A 4QH1A 3WTLA 2BYQA 4ZR6A 4AFGA 4TNVA 4HFEA
chains in the Genus database with same CATH superfamily
2Y58A 4AFTA 4UM3S 3WTJA 1UV6A 3EI0A 4TNWA 2YN6A 4UM3A 2BG9C 3UU4A 4ALXA 5J5HA 4PIRA 2ZJVA 2W8FA 3WTIA 5BRXA 4ZZCA 5J0ZA 3JAEA 5HCMA 4HFIA 2XNVA 5SYOA 4HFCA 3U8KA 3UQ4A 4Z91A 5BP0A 4WV9A 3P4WA 3JAFA 3UU5A 3PMZA 4TWDA 3GUAA 3SQ9A 5HEHA 3SIOA 2YOEA 3IGQA 3RIAA 4HFDA 4COFA 4BFQA 5KZUA 5HEJA 2WNJA 1UW6A 3PEOA 5J5GA 4XK9A 4LMKA 2Y54A 3RQUA 2WNLA 3UU8A 4BQTA 4HFBA 4IL9A 4ZK1A 3WTMA 5KE4A 3P50A 3WTHA 5J5FA 4IREA 2BJ0A 2YKSA 5HEUA 4FRRA 2BYNA 2XQ9A 3SH1A 3T4MA 4ZJTA 2X00D 3LSVA 2BYSA 5LXBA 2XQAA 4A98A 2BG9E 4D01A 4TWFA 3UU6A 5AFJA 2XQ8A 4X5TA 2XZ5A 3ZKRA 4NPPA 2BYPA 5JMEA 3TLWA 4HFHA 3WTNA 2XNTA 4EZ1A 2VL0A 5CFBA 4F8HA 4QAAA 3C79A 3U8MA 2ZJUA 5HEGA 2WN9A 4ILBA 4AFHA 5AFLA 2W8GA 3ZDGA 3TLVA 3WTOA 4ZK4A 2BYRA 5AFKA 5BW2A 2QC1B 3RHWA 4UY2A 5IUXA 3TLTA 2Y7YA 5AFNA 4UM3P 3RIFA 5L47A 2XYTA 3TLUA 5AFMB 4LMJA 5HEOA 2XYSA 3RI5A 2PGZA 4Z90A 5TVCA 4ZJSA 5AFMA 2BR7A 5L4HA 2Y57A 2XQ4A 2XQ7A 2WZYA 5LG3A 4ILAA 4LMLA 5AFHA 2XQ5A 3RQWA 4ILCA 5FJVA 3SQ6A 4HQPA 4QABA 2YMEA 4UXUA 4ZZBA 4QACA 1I9BA 2XNUA 3ZDHA 2YMDA 3JADA 4UM1A 2XZ6A 5L4EA 2Y56A 2UZ6A 2XQ3A 5J5IA 3U8JA 1UX2A 2X00A 2BR8A 4DBMA 3EHZA 4B5DA 3UUBA 4NZBA 4ZRUA 2PH9A 4A97A 2XQ6A 3U8LA 3C84A 2BG9B 3UU3A 5AINA 4QH5A 4TWHA 2BG9A 4QH4A 3U8NA 3WTKA 2C9TA 3UQ7A 3TLSA 2WNCA 3WIPA 3EAMA 5CO5A 5HCJA 4XHEA 4IL4A 4QH1A 3WTLA 2BYQA 4ZR6A 4AFGA 4TNVA 4HFEA
chains in the Genus database with same CATH topology
2Y58A 4AFTA 4UM3S 3WTJA 1UV6A 3EI0A 4TNWA 2YN6A 4UM3A 2BG9C 3UU4A 4ALXA 5J5HA 4PIRA 2ZJVA 2W8FA 3WTIA 5BRXA 4ZZCA 5J0ZA 3JAEA 5HCMA 4HFIA 2XNVA 5SYOA 4HFCA 3U8KA 3UQ4A 4Z91A 5BP0A 4WV9A 3P4WA 3JAFA 3UU5A 3PMZA 4TWDA 3GUAA 3SQ9A 5HEHA 3SIOA 2YOEA 3IGQA 3RIAA 4HFDA 4COFA 4BFQA 5KZUA 5HEJA 2WNJA 1UW6A 3PEOA 5J5GA 4XK9A 4LMKA 2Y54A 3RQUA 2WNLA 3UU8A 4BQTA 4HFBA 4IL9A 4ZK1A 3WTMA 5KE4A 3P50A 3WTHA 5J5FA 4IREA 2BJ0A 2YKSA 5HEUA 4FRRA 2BYNA 2XQ9A 3SH1A 3T4MA 4ZJTA 2X00D 3LSVA 2BYSA 5LXBA 2XQAA 4A98A 2BG9E 4D01A 4TWFA 3UU6A 5AFJA 2XQ8A 4X5TA 2XZ5A 3ZKRA 4NPPA 2BYPA 5JMEA 3TLWA 4HFHA 3WTNA 2XNTA 4EZ1A 2VL0A 5CFBA 4F8HA 4QAAA 3C79A 3U8MA 2ZJUA 5HEGA 2WN9A 4ILBA 4AFHA 5AFLA 2W8GA 3ZDGA 3TLVA 3WTOA 4ZK4A 2BYRA 5AFKA 5BW2A 2QC1B 3RHWA 4UY2A 5IUXA 3TLTA 2Y7YA 5AFNA 4UM3P 3RIFA 5L47A 2XYTA 3TLUA 5AFMB 4LMJA 5HEOA 2XYSA 3RI5A 2PGZA 4Z90A 5TVCA 4ZJSA 5AFMA 2BR7A 5L4HA 2Y57A 2XQ4A 2XQ7A 2WZYA 5LG3A 4ILAA 4LMLA 5AFHA 2XQ5A 3RQWA 4ILCA 5FJVA 3SQ6A 4HQPA 4QABA 2YMEA 4UXUA 4ZZBA 4QACA 1I9BA 2XNUA 3ZDHA 2YMDA 3JADA 4UM1A 2XZ6A 5L4EA 2Y56A 2UZ6A 2XQ3A 5J5IA 3U8JA 1UX2A 2X00A 2BR8A 4DBMA 3EHZA 4B5DA 3UUBA 4NZBA 4ZRUA 2PH9A 4A97A 2XQ6A 3U8LA 3C84A 2BG9B 3UU3A 5AINA 4QH5A 4TWHA 2BG9A 4QH4A 3U8NA 3WTKA 2C9TA 3UQ7A 3TLSA 2WNCA 3WIPA 3EAMA 5CO5A 5HCJA 4XHEA 4IL4A 4QH1A 3WTLA 2BYQA 4ZR6A 4AFGA 4TNVA 4HFEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y58 A;  4AFT A;  4UM3 S;  3WTJ A;  1UV6 A;  3EI0 A;  4TNW A;  2YN6 A;  4UM3 A;  2BG9 C;  3UU4 A;  4ALX A;  5J5H A;  4PIR A;  2ZJV A;  2W8F A;  3WTI A;  5BRX A;  4ZZC A;  5J0Z A;  3JAE A;  5HCM A;  4HFI A;  2XNV A;  5SYO A;  4HFC A;  3U8K A;  3UQ4 A;  4Z91 A;  5BP0 A;  4WV9 A;  3P4W A;  3JAF A;  3UU5 A;  3PMZ A;  4TWD A;  3GUA A;  3SQ9 A;  5HEH A;  3SIO A;  2YOE A;  3IGQ A;  3RIA A;  4HFD A;  4COF A;  4BFQ A;  5KZU A;  5HEJ A;  2WNJ A;  1UW6 A;  3PEO A;  5J5G A;  4XK9 A;  4LMK A;  2Y54 A;  3RQU A;  2WNL A;  3UU8 A;  4BQT A;  4HFB A;  4IL9 A;  4ZK1 A;  3WTM A;  5KE4 A;  3P50 A;  3WTH A;  5J5F A;  4IRE A;  2BJ0 A;  2YKS A;  5HEU A;  4FRR A;  2BYN A;  2XQ9 A;  3SH1 A;  3T4M A;  4ZJT A;  2X00 D;  3LSV A;  2BYS A;  5LXB A;  2XQA A;  4A98 A;  2BG9 E;  4D01 A;  4TWF A;  3UU6 A;  5AFJ A;  2XQ8 A;  4X5T A;  2XZ5 A;  3ZKR A;  4NPP A;  2BYP A;  5JME A;  3TLW A;  4HFH A;  3WTN A;  2XNT A;  4EZ1 A;  2VL0 A;  5CFB A;  4F8H A;  4QAA A;  3C79 A;  3U8M A;  2ZJU A;  5HEG A;  2WN9 A;  4ILB A;  4AFH A;  5AFL A;  2W8G A;  3ZDG A;  3TLV A;  3WTO A;  4ZK4 A;  2BYR A;  5AFK A;  5BW2 A;  2QC1 B;  3RHW A;  4UY2 A;  5IUX A;  3TLT A;  2Y7Y A;  5AFN A;  4UM3 P;  3RIF A;  5L47 A;  2XYT A;  3TLU A;  5AFM B;  4LMJ A;  5HEO A;  2XYS A;  3RI5 A;  2PGZ A;  4Z90 A;  5TVC A;  4ZJS A;  5AFM A;  2BR7 A;  5L4H A;  2Y57 A;  2XQ4 A;  2XQ7 A;  2WZY A;  5LG3 A;  4ILA A;  4LML A;  5AFH A;  2XQ5 A;  3RQW A;  4ILC A;  5FJV A;  3SQ6 A;  4HQP A;  4QAB A;  2YME A;  4UXU A;  4ZZB A;  4QAC A;  1I9B A;  2XNU A;  3ZDH A;  2YMD A;  3JAD A;  4UM1 A;  2XZ6 A;  5L4E A;  2Y56 A;  2UZ6 A;  2XQ3 A;  5J5I A;  3U8J A;  1UX2 A;  2X00 A;  2BR8 A;  4DBM A;  3EHZ A;  4B5D A;  3UUB A;  4NZB A;  4ZRU A;  2PH9 A;  4A97 A;  2XQ6 A;  3U8L A;  3C84 A;  2BG9 B;  3UU3 A;  5AIN A;  4QH5 A;  4TWH A;  2BG9 A;  4QH4 A;  3U8N A;  3WTK A;  2C9T A;  3UQ7 A;  3TLS A;  2WNC A;  3WIP A;  3EAM A;  5CO5 A;  5HCJ A;  4XHE A;  4IL4 A;  4QH1 A;  3WTL A;  2BYQ A;  4ZR6 A;  4AFG A;  4TNV A;  4HFE A; 
#chains in the Genus database with same CATH topology
 2Y58 A;  4AFT A;  4UM3 S;  3WTJ A;  1UV6 A;  3EI0 A;  4TNW A;  2YN6 A;  4UM3 A;  2BG9 C;  3UU4 A;  4ALX A;  5J5H A;  4PIR A;  2ZJV A;  2W8F A;  3WTI A;  5BRX A;  4ZZC A;  5J0Z A;  3JAE A;  5HCM A;  4HFI A;  2XNV A;  5SYO A;  4HFC A;  3U8K A;  3UQ4 A;  4Z91 A;  5BP0 A;  4WV9 A;  3P4W A;  3JAF A;  3UU5 A;  3PMZ A;  4TWD A;  3GUA A;  3SQ9 A;  5HEH A;  3SIO A;  2YOE A;  3IGQ A;  3RIA A;  4HFD A;  4COF A;  4BFQ A;  5KZU A;  5HEJ A;  2WNJ A;  1UW6 A;  3PEO A;  5J5G A;  4XK9 A;  4LMK A;  2Y54 A;  3RQU A;  2WNL A;  3UU8 A;  4BQT A;  4HFB A;  4IL9 A;  4ZK1 A;  3WTM A;  5KE4 A;  3P50 A;  3WTH A;  5J5F A;  4IRE A;  2BJ0 A;  2YKS A;  5HEU A;  4FRR A;  2BYN A;  2XQ9 A;  3SH1 A;  3T4M A;  4ZJT A;  2X00 D;  3LSV A;  2BYS A;  5LXB A;  2XQA A;  4A98 A;  2BG9 E;  4D01 A;  4TWF A;  3UU6 A;  5AFJ A;  2XQ8 A;  4X5T A;  2XZ5 A;  3ZKR A;  4NPP A;  2BYP A;  5JME A;  3TLW A;  4HFH A;  3WTN A;  2XNT A;  4EZ1 A;  2VL0 A;  5CFB A;  4F8H A;  4QAA A;  3C79 A;  3U8M A;  2ZJU A;  5HEG A;  2WN9 A;  4ILB A;  4AFH A;  5AFL A;  2W8G A;  3ZDG A;  3TLV A;  3WTO A;  4ZK4 A;  2BYR A;  5AFK A;  5BW2 A;  2QC1 B;  3RHW A;  4UY2 A;  5IUX A;  3TLT A;  2Y7Y A;  5AFN A;  4UM3 P;  3RIF A;  5L47 A;  2XYT A;  3TLU A;  5AFM B;  4LMJ A;  5HEO A;  2XYS A;  3RI5 A;  2PGZ A;  4Z90 A;  5TVC A;  4ZJS A;  5AFM A;  2BR7 A;  5L4H A;  2Y57 A;  2XQ4 A;  2XQ7 A;  2WZY A;  5LG3 A;  4ILA A;  4LML A;  5AFH A;  2XQ5 A;  3RQW A;  4ILC A;  5FJV A;  3SQ6 A;  4HQP A;  4QAB A;  2YME A;  4UXU A;  4ZZB A;  4QAC A;  1I9B A;  2XNU A;  3ZDH A;  2YMD A;  3JAD A;  4UM1 A;  2XZ6 A;  5L4E A;  2Y56 A;  2UZ6 A;  2XQ3 A;  5J5I A;  3U8J A;  1UX2 A;  2X00 A;  2BR8 A;  4DBM A;  3EHZ A;  4B5D A;  3UUB A;  4NZB A;  4ZRU A;  2PH9 A;  4A97 A;  2XQ6 A;  3U8L A;  3C84 A;  2BG9 B;  3UU3 A;  5AIN A;  4QH5 A;  4TWH A;  2BG9 A;  4QH4 A;  3U8N A;  3WTK A;  2C9T A;  3UQ7 A;  3TLS A;  2WNC A;  3WIP A;  3EAM A;  5CO5 A;  5HCJ A;  4XHE A;  4IL4 A;  4QH1 A;  3WTL A;  2BYQ A;  4ZR6 A;  4AFG A;  4TNV A;  4HFE A; 
#chains in the Genus database with same CATH homology
 2Y58 A;  4AFT A;  4UM3 S;  3WTJ A;  1UV6 A;  3EI0 A;  4TNW A;  2YN6 A;  4UM3 A;  2BG9 C;  3UU4 A;  4ALX A;  5J5H A;  4PIR A;  2ZJV A;  2W8F A;  3WTI A;  5BRX A;  4ZZC A;  5J0Z A;  3JAE A;  5HCM A;  4HFI A;  2XNV A;  5SYO A;  4HFC A;  3U8K A;  3UQ4 A;  4Z91 A;  5BP0 A;  4WV9 A;  3P4W A;  3JAF A;  3UU5 A;  3PMZ A;  4TWD A;  3GUA A;  3SQ9 A;  5HEH A;  3SIO A;  2YOE A;  3IGQ A;  3RIA A;  4HFD A;  4COF A;  4BFQ A;  5KZU A;  5HEJ A;  2WNJ A;  1UW6 A;  3PEO A;  5J5G A;  4XK9 A;  4LMK A;  2Y54 A;  3RQU A;  2WNL A;  3UU8 A;  4BQT A;  4HFB A;  4IL9 A;  4ZK1 A;  3WTM A;  5KE4 A;  3P50 A;  3WTH A;  5J5F A;  4IRE A;  2BJ0 A;  2YKS A;  5HEU A;  4FRR A;  2BYN A;  2XQ9 A;  3SH1 A;  3T4M A;  4ZJT A;  2X00 D;  3LSV A;  2BYS A;  5LXB A;  2XQA A;  4A98 A;  2BG9 E;  4D01 A;  4TWF A;  3UU6 A;  5AFJ A;  2XQ8 A;  4X5T A;  2XZ5 A;  3ZKR A;  4NPP A;  2BYP A;  5JME A;  3TLW A;  4HFH A;  3WTN A;  2XNT A;  4EZ1 A;  2VL0 A;  5CFB A;  4F8H A;  4QAA A;  3C79 A;  3U8M A;  2ZJU A;  5HEG A;  2WN9 A;  4ILB A;  4AFH A;  5AFL A;  2W8G A;  3ZDG A;  3TLV A;  3WTO A;  4ZK4 A;  2BYR A;  5AFK A;  5BW2 A;  2QC1 B;  3RHW A;  4UY2 A;  5IUX A;  3TLT A;  2Y7Y A;  5AFN A;  4UM3 P;  3RIF A;  5L47 A;  2XYT A;  3TLU A;  5AFM B;  4LMJ A;  5HEO A;  2XYS A;  3RI5 A;  2PGZ A;  4Z90 A;  5TVC A;  4ZJS A;  5AFM A;  2BR7 A;  5L4H A;  2Y57 A;  2XQ4 A;  2XQ7 A;  2WZY A;  5LG3 A;  4ILA A;  4LML A;  5AFH A;  2XQ5 A;  3RQW A;  4ILC A;  5FJV A;  3SQ6 A;  4HQP A;  4QAB A;  2YME A;  4UXU A;  4ZZB A;  4QAC A;  1I9B A;  2XNU A;  3ZDH A;  2YMD A;  3JAD A;  4UM1 A;  2XZ6 A;  5L4E A;  2Y56 A;  2UZ6 A;  2XQ3 A;  5J5I A;  3U8J A;  1UX2 A;  2X00 A;  2BR8 A;  4DBM A;  3EHZ A;  4B5D A;  3UUB A;  4NZB A;  4ZRU A;  2PH9 A;  4A97 A;  2XQ6 A;  3U8L A;  3C84 A;  2BG9 B;  3UU3 A;  5AIN A;  4QH5 A;  4TWH A;  2BG9 A;  4QH4 A;  3U8N A;  3WTK A;  2C9T A;  3UQ7 A;  3TLS A;  2WNC A;  3WIP A;  3EAM A;  5CO5 A;  5HCJ A;  4XHE A;  4IL4 A;  4QH1 A;  3WTL A;  2BYQ A;  4ZR6 A;  4AFG A;  4TNV A;  4HFE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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