2YUHA

Solution structure of the c-terminal region in human tubulin folding cofactor c
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
179
structure length
179
Chain Sequence
GSSGSSGSWVCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEERNIQWDSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Tubulin-specific chaperone C
publication title Solution structure of the C-terminal region in human tubulin folding cofactor C
rcsb
source organism Homo sapiens
molecule tags Chaperone
total genus 27
structure length 179
sequence length 179
ec nomenclature
pdb deposition date 2007-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07986 TBCC Tubulin binding cofactor C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2yuhA01
1KQ5A 2B0RA 2YUHA 2BX6A 1K4ZA 1HF2A 3BH6B 4V02C 1K8FA 3BH7B
chains in the Genus database with same CATH superfamily
2IQ7A 2QY1A 1OGOX 1TSPA 1EZGA 3SUCA 1BN8A 3RIQA 1O8EA 2UVFA 3B8YA 1CLWA 2BM5A 4KH3A 4XKVA 1IB4A 2IOUG 1EE6A 3NB2A 1K8FA 2XTYA 1OOCA 3GQ7A 2W7ZA 1OGMX 1O8KA 3GQ8A 4OM9A 3PSZA 4Z06A 3AK5A 4W8TA 4XORA 1O8HA 3B4NA 1L1IA 3B90A 4XLEA 3VMWA 4C2LA 1AIRA 1H80A 2INVA 2NTPA 4Z05A 2BX6A 2NZMA 3H09A 1GQ8A 3P4GA 4U49A 2VFOA 1QA2A 1IDJA 1OFLA 2BM7A 2VFNA 4OJOA 2O1DA 2X3HA 4YC5A 4XOTA 4OJ5A 1WMRA 4Z03A 3GQAA 4OJLA 2O04A 4V02C 4XLCA 4XL9A 2PYHA 1IA5A 2XTWA 2O0WA 1NHCA 4W8QA 1HG8A 2VFQA 1TYXA 3SYJA 3SZEA 1KCCA 1QA3A 3VSUA 3LYCA 4YZ0A 1K4ZA 2Z8GA 2XT4A 4YZQA 3JX8A 1CZFA 5JLVC 2VBEA 1PE9A 2F3LA 3DU1X 1OFDA 2XC1A 2YUHA 4XNFA 4NK8A 3ZSCA 3LMWA 5DNSA 1RU4A 2J8IA 3GQ9A 2NTQA 1KTWA 2O17A 3WWGA 2XT2A 1K5CA 4XONA 3N90A 2UVEA 4YEIA 1EA0A 4OZYA 1PXZA 1HF2A 1QA1A 1QQ1A 1RWRA 3UW0A 3N6ZA 4YDTA 1OFEA 4XLHA 1RMGA 1LM1A 2X85A 4OZZA 4XQFA 3VSVA 3PETA 2NTBA 1O8FA 4PMHA 4YZXA 4XLAA 1DBOA 2V5IA 5AMVA 5C1CA 1QCXA 4URRA 3JURA 1LLZA 1TYUA 4I84A 2O6WA 4JRAC 1O88A 2B0RA 4XMYA 1QRBA 1TYWA 3GRHA 1O8GA 2J8KA 1KQ5A 2PECA 3ML3A 1O8DA 4MR0A 4YELA 1O8MA 1O8LA 4YCQA 2XTXA 1DBGA 2NSPA 1JRGA 3VSTA 1XG2A 1KCDA 2X6YA 4OJPA 2VFPA 2VBKA 5C1EA 4W8SA 2O0VA 2PYGA 3NAWA 1OFMA 1O8IA 3SY2A 2VJJA 1TYVA 2X6WA 2VBMA 3SQVA 2QYUA 3FY3A 2BM6A 4XR6A 2EWEA 2NT9A 3BH6B 1BHEA 4MXNA 4XLFA 2BM4A 3BH7B 1JTAA 4U4BA 4YZAA 3VMVA 5JMCB 4YEJA 4XOPA 4NK6A 1PLUA 1WXRA 1O8JA 1LLWA 4YFOA 2INUA 1QRCA 2VFMA 1IDKA 2QX3A 3PSSA 1QJVA 4AVZA 4W8RA 2X6XA 3KRGA 2VJIA 3EQNA 2NT6A 2ODLA 3TH0A 4EW9A 1X0CA 3ZPPA 3EQOA 2NSTA 2QXZA 4HWVA 2BSPA 2QZAA 3T9GA 4XKWA 1DABA 3LJYA 4OPWA 4XN3A 4OJ6A 4XM3A 4XN0A 2G0YA 1VBLA
chains in the Genus database with same CATH topology
1TYVA 1TSPA 2V5IA 2VFQA 3SYJA 1TYXA 4V02C 3RIQA 3SZEA 1QA3A 2BM6A 3LYCA 1K4ZA 2BM5A 1CLWA 3BH6B 1TYUA 3JX8A 4KH3A 2BM4A 2IOUG 3BH7B 2F3LA 4JRAC 5JLVC 2XC1A 1WXRA 2B0RA 2YUHA 2W7ZA 4OM9A 2J8IA 3AK5A 1QRCA 1TYWA 1QRBA 2VFMA 5JMCB 1KQ5A 3ML3A 3N90A 3TH0A 2BX6A 3H09A 3P4GA 1DABA 1HF2A 1QA1A 1QQ1A 2VFOA 4OJPA 2VFPA 1QA2A 2VFNA 2BM7A 3N6ZA 4OJOA 3LJYA 4OPWA 4OJ5A 4OJ6A 4OJLA 3PETA 2G0YA 1K8FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KQ5 A;  2B0R A;  2YUH A;  2BX6 A;  1K4Z A;  1HF2 A;  3BH6 B;  4V02 C;  1K8F A;  3BH7 B; 
#chains in the Genus database with same CATH topology
 2IQ7 A;  2QY1 A;  1OGO X;  1TSP A;  1EZG A;  3SUC A;  1BN8 A;  3RIQ A;  1O8E A;  2UVF A;  3B8Y A;  1CLW A;  2BM5 A;  4KH3 A;  4XKV A;  1IB4 A;  2IOU G;  1EE6 A;  3NB2 A;  1K8F A;  2XTY A;  1OOC A;  3GQ7 A;  2W7Z A;  1OGM X;  1O8K A;  3GQ8 A;  4OM9 A;  3PSZ A;  4Z06 A;  3AK5 A;  4W8T A;  4XOR A;  1O8H A;  3B4N A;  1L1I A;  3B90 A;  4XLE A;  3VMW A;  4C2L A;  1AIR A;  1H80 A;  2INV A;  2NTP A;  4Z05 A;  2BX6 A;  2NZM A;  3H09 A;  1GQ8 A;  3P4G A;  4U49 A;  2VFO A;  1QA2 A;  1IDJ A;  1OFL A;  2BM7 A;  2VFN A;  4OJO A;  2O1D A;  2X3H A;  4YC5 A;  4XOT A;  4OJ5 A;  1WMR A;  4Z03 A;  3GQA A;  4OJL A;  2O04 A;  4V02 C;  4XLC A;  4XL9 A;  2PYH A;  1IA5 A;  2XTW A;  2O0W A;  1NHC A;  4W8Q A;  1HG8 A;  2VFQ A;  1TYX A;  3SYJ A;  3SZE A;  1KCC A;  1QA3 A;  3VSU A;  3LYC A;  4YZ0 A;  1K4Z A;  2Z8G A;  2XT4 A;  4YZQ A;  3JX8 A;  1CZF A;  5JLV C;  2VBE A;  1PE9 A;  2F3L A;  3DU1 X;  1OFD A;  2XC1 A;  2YUH A;  4XNF A;  4NK8 A;  3ZSC A;  3LMW A;  5DNS A;  1RU4 A;  2J8I A;  3GQ9 A;  2NTQ A;  1KTW A;  2O17 A;  3WWG A;  2XT2 A;  1K5C A;  4XON A;  3N90 A;  2UVE A;  4YEI A;  1EA0 A;  4OZY A;  1PXZ A;  1HF2 A;  1QA1 A;  1QQ1 A;  1RWR A;  3UW0 A;  3N6Z A;  4YDT A;  1OFE A;  4XLH A;  1RMG A;  1LM1 A;  2X85 A;  4OZZ A;  4XQF A;  3VSV A;  3PET A;  2NTB A;  1O8F A;  4PMH A;  4YZX A;  4XLA A;  1DBO A;  2V5I A;  5AMV A;  5C1C A;  1QCX A;  4URR A;  3JUR A;  1LLZ A;  1TYU A;  4I84 A;  2O6W A;  4JRA C;  1O88 A;  2B0R A;  4XMY A;  1QRB A;  1TYW A;  3GRH A;  1O8G A;  2J8K A;  1KQ5 A;  2PEC A;  3ML3 A;  1O8D A;  4MR0 A;  4YEL A;  1O8M A;  1O8L A;  4YCQ A;  2XTX A;  1DBG A;  2NSP A;  1JRG A;  3VST A;  1XG2 A;  1KCD A;  2X6Y A;  4OJP A;  2VFP A;  2VBK A;  5C1E A;  4W8S A;  2O0V A;  2PYG A;  3NAW A;  1OFM A;  1O8I A;  3SY2 A;  2VJJ A;  1TYV A;  2X6W A;  2VBM A;  3SQV A;  2QYU A;  3FY3 A;  2BM6 A;  4XR6 A;  2EWE A;  2NT9 A;  3BH6 B;  1BHE A;  4MXN A;  4XLF A;  2BM4 A;  3BH7 B;  1JTA A;  4U4B A;  4YZA A;  3VMV A;  5JMC B;  4YEJ A;  4XOP A;  4NK6 A;  1PLU A;  1WXR A;  1O8J A;  1LLW A;  4YFO A;  2INU A;  1QRC A;  2VFM A;  1IDK A;  2QX3 A;  3PSS A;  1QJV A;  4AVZ A;  4W8R A;  2X6X A;  3KRG A;  2VJI A;  3EQN A;  2NT6 A;  2ODL A;  3TH0 A;  4EW9 A;  1X0C A;  3ZPP A;  3EQO A;  2NST A;  2QXZ A;  4HWV A;  2BSP A;  2QZA A;  3T9G A;  4XKW A;  1DAB A;  3LJY A;  4OPW A;  4XN3 A;  4OJ6 A;  4XM3 A;  4XN0 A;  2G0Y A;  1VBL A; 
#chains in the Genus database with same CATH homology
 1TYV A;  1TSP A;  2V5I A;  2VFQ A;  3SYJ A;  1TYX A;  4V02 C;  3RIQ A;  3SZE A;  1QA3 A;  2BM6 A;  3LYC A;  1K4Z A;  2BM5 A;  1CLW A;  3BH6 B;  1TYU A;  3JX8 A;  4KH3 A;  2BM4 A;  2IOU G;  3BH7 B;  2F3L A;  4JRA C;  5JLV C;  2XC1 A;  1WXR A;  2B0R A;  2YUH A;  2W7Z A;  4OM9 A;  2J8I A;  3AK5 A;  1QRC A;  1TYW A;  1QRB A;  2VFM A;  5JMC B;  1KQ5 A;  3ML3 A;  3N90 A;  3TH0 A;  2BX6 A;  3H09 A;  3P4G A;  1DAB A;  1HF2 A;  1QA1 A;  1QQ1 A;  2VFO A;  4OJP A;  2VFP A;  1QA2 A;  2VFN A;  2BM7 A;  3N6Z A;  4OJO A;  3LJY A;  4OPW A;  4OJ5 A;  4OJ6 A;  4OJL A;  3PET A;  2G0Y A;  1K8F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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