2YUHA

Solution structure of the c-terminal region in human tubulin folding cofactor c
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
179
structure length
179
Chain Sequence
GSSGSSGSWVCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEERNIQWDSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of the C-terminal region in human tubulin folding cofactor C
rcsb
source organism Homo sapiens
molecule tags Chaperone
molecule keywords Tubulin-specific chaperone C
total genus 27
structure length 179
sequence length 179
ec nomenclature
pdb deposition date 2007-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07986 TBCC Tubulin binding cofactor C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2yuhA01
1K8FA 4V02C 2BX6A 1K4ZA 2YUHA 1HF2A 3BH6B 1KQ5A 2B0RA 3BH7B
chains in the Genus database with same CATH superfamily
4YC5A 3SZEA 4YEIA 1RMGA 4W8TA 2QZAA 1LLZA 2BM6A 4XM3A 3GQ7A 2EWEA 3SY2A 1CZFA 4OZZA 3JURA 3SUCA 3N6ZA 2INVA 3N90A 4XL9A 2ODLA 3JX8A 2BX6A 4XONA 2XTWA 3P4GA 2NSTA 2X3HA 1DBOA 3EQOA 4URRA 1LLWA 2IQ7A 3LMWA 1O8EA 1BN8A 1WMRA 4XMYA 2O0VA 1EA0A 2O1DA 2QY1A 2J8KA 4XLEA 1QA2A 3LJYA 4OZYA 4NK6A 2J8IA 2XT2A 4U49A 4XQFA 2F3LA 1RU4A 2QYUA 1BHEA 3PSZA 3RIQA 1IDJA 4XLFA 3GQAA 1QRCA 2VFQA 4XR6A 1OGMX 1O8LA 2VJJA 1KCCA 2INUA 1IA5A 1PLUA 3NAWA 1IB4A 2VFPA 2UVEA 2NTBA 4YDTA 3DU1X 4KH3A 3TH0A 3UW0A 3NB2A 5C1EA 1K5CA 1QA1A 2O04A 2UVFA 4YELA 3EQNA 4YZ0A 4MXNA 1O8IA 3VSTA 4OM9A 2VBEA 2NTPA 4XKVA 4Z05A 1L1IA 1EZGA 1K8FA 3FY3A 1KTWA 4W8RA 1OFMA 1QJVA 3AK5A 5JLVC 4XKWA 2O0WA 3ZPPA 3B8YA 4Z06A 2NZMA 1O8FA 2VBKA 1X0CA 2BSPA 2O6WA 2XTXA 2XT4A 1TSPA 4XLHA 2B0RA 5AMVA 4C2LA 1PXZA 1IDKA 2VFOA 1WXRA 3GQ8A 4YEJA 1H80A 1QRBA 4YZAA 1LM1A 2V5IA 1NHCA 1DABA 4YCQA 4YZXA 1AIRA 3T9GA 3SYJA 2W7ZA 4AVZA 2X6YA 1OOCA 3GQ9A 1O8JA 1K4ZA 1KCDA 4EW9A 3PETA 3ZSCA 1PE9A 2NT6A 4I84A 2PECA 4YZQA 4OJLA 3SQVA 4XN3A 1QQ1A 2VFNA 2VBMA 1DBGA 4MR0A 4V02C 3PSSA 3B4NA 4PMHA 1TYXA 4XOPA 1TYWA 2PYHA 1XG2A 4XLAA 2BM5A 4W8SA 3VMWA 5DNSA 5C1CA 1OGOX 2NT9A 4XORA 2O17A 3VMVA 4YFOA 4OPWA 3VSUA 1EE6A 2X6XA 1OFDA 2X6WA 4JRAC 1CLWA 2X85A 3WWGA 1HF2A 4XOTA 1HG8A 3GRHA 2QX3A 2IOUG 3VSVA 1GQ8A 1O88A 3ML3A 4XNFA 5JMCB 1O8KA 1QCXA 4HWVA 4XLCA 1QA3A 1O8GA 1JRGA 3LYCA 1O8DA 2G0YA 4OJPA 4Z03A 2BM7A 4W8QA 4XN0A 1OFEA 2Z8GA 1O8HA 2QXZA 4OJ6A 3KRGA 1TYUA 1OFLA 2NSPA 2NTQA 4NK8A 3B90A 1JTAA 2PYGA 4OJOA 1VBLA 2BM4A 1TYVA 4OJ5A 2VJIA 3H09A 2VFMA 2YUHA 4U4BA 2XTYA 1O8MA 3BH7B 2XC1A 3BH6B 1KQ5A 1RWRA
chains in the Genus database with same CATH topology
3SZEA 2VFOA 1WXRA 4JRAC 1CLWA 2BM6A 1HF2A 1QRBA 2VFPA 2V5IA 2IOUG 1DABA 3ML3A 3SYJA 5JMCB 4KH3A 3TH0A 3N6ZA 3N90A 2W7ZA 1QA1A 3JX8A 2BX6A 1QA3A 1K4ZA 3LYCA 3P4GA 2XC1A 3PETA 2G0YA 4OJPA 4OM9A 2BM7A 1K8FA 4OJLA 1QQ1A 2VFNA 4V02C 1QA2A 4OJ6A 3AK5A 5JLVC 1TYUA 3LJYA 1TYXA 2J8IA 4OJOA 1TYWA 2BM4A 2F3LA 3RIQA 1TYVA 4OJ5A 2BM5A 3H09A 2VFMA 2YUHA 1QRCA 4OPWA 1TSPA 2VFQA 3BH6B 1KQ5A 2B0RA 3BH7B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1K8F A;  4V02 C;  2BX6 A;  1K4Z A;  2YUH A;  1HF2 A;  3BH6 B;  1KQ5 A;  2B0R A;  3BH7 B; 
#chains in the Genus database with same CATH topology
 4YC5 A;  3SZE A;  4YEI A;  1RMG A;  4W8T A;  2QZA A;  1LLZ A;  2BM6 A;  4XM3 A;  3GQ7 A;  2EWE A;  3SY2 A;  1CZF A;  4OZZ A;  3JUR A;  3SUC A;  3N6Z A;  2INV A;  3N90 A;  4XL9 A;  2ODL A;  3JX8 A;  2BX6 A;  4XON A;  2XTW A;  3P4G A;  2NST A;  2X3H A;  1DBO A;  3EQO A;  4URR A;  1LLW A;  2IQ7 A;  3LMW A;  1O8E A;  1BN8 A;  1WMR A;  4XMY A;  2O0V A;  1EA0 A;  2O1D A;  2QY1 A;  2J8K A;  4XLE A;  1QA2 A;  3LJY A;  4OZY A;  4NK6 A;  2J8I A;  2XT2 A;  4U49 A;  4XQF A;  2F3L A;  1RU4 A;  2QYU A;  1BHE A;  3PSZ A;  3RIQ A;  1IDJ A;  4XLF A;  3GQA A;  1QRC A;  2VFQ A;  4XR6 A;  1OGM X;  1O8L A;  2VJJ A;  1KCC A;  2INU A;  1IA5 A;  1PLU A;  3NAW A;  1IB4 A;  2VFP A;  2UVE A;  2NTB A;  4YDT A;  3DU1 X;  4KH3 A;  3TH0 A;  3UW0 A;  3NB2 A;  5C1E A;  1K5C A;  1QA1 A;  2O04 A;  2UVF A;  4YEL A;  3EQN A;  4YZ0 A;  4MXN A;  1O8I A;  3VST A;  4OM9 A;  2VBE A;  2NTP A;  4XKV A;  4Z05 A;  1L1I A;  1EZG A;  1K8F A;  3FY3 A;  1KTW A;  4W8R A;  1OFM A;  1QJV A;  3AK5 A;  5JLV C;  4XKW A;  2O0W A;  3ZPP A;  3B8Y A;  4Z06 A;  2NZM A;  1O8F A;  2VBK A;  1X0C A;  2BSP A;  2O6W A;  2XTX A;  2XT4 A;  1TSP A;  4XLH A;  2B0R A;  5AMV A;  4C2L A;  1PXZ A;  1IDK A;  2VFO A;  1WXR A;  3GQ8 A;  4YEJ A;  1H80 A;  1QRB A;  4YZA A;  1LM1 A;  2V5I A;  1NHC A;  1DAB A;  4YCQ A;  4YZX A;  1AIR A;  3T9G A;  3SYJ A;  2W7Z A;  4AVZ A;  2X6Y A;  1OOC A;  3GQ9 A;  1O8J A;  1K4Z A;  1KCD A;  4EW9 A;  3PET A;  3ZSC A;  1PE9 A;  2NT6 A;  4I84 A;  2PEC A;  4YZQ A;  4OJL A;  3SQV A;  4XN3 A;  1QQ1 A;  2VFN A;  2VBM A;  1DBG A;  4MR0 A;  4V02 C;  3PSS A;  3B4N A;  4PMH A;  1TYX A;  4XOP A;  1TYW A;  2PYH A;  1XG2 A;  4XLA A;  2BM5 A;  4W8S A;  3VMW A;  5DNS A;  5C1C A;  1OGO X;  2NT9 A;  4XOR A;  2O17 A;  3VMV A;  4YFO A;  4OPW A;  3VSU A;  1EE6 A;  2X6X A;  1OFD A;  2X6W A;  4JRA C;  1CLW A;  2X85 A;  3WWG A;  1HF2 A;  4XOT A;  1HG8 A;  3GRH A;  2QX3 A;  2IOU G;  3VSV A;  1GQ8 A;  1O88 A;  3ML3 A;  4XNF A;  5JMC B;  1O8K A;  1QCX A;  4HWV A;  4XLC A;  1QA3 A;  1O8G A;  1JRG A;  3LYC A;  1O8D A;  2G0Y A;  4OJP A;  4Z03 A;  2BM7 A;  4W8Q A;  4XN0 A;  1OFE A;  2Z8G A;  1O8H A;  2QXZ A;  4OJ6 A;  3KRG A;  1TYU A;  1OFL A;  2NSP A;  2NTQ A;  4NK8 A;  3B90 A;  1JTA A;  2PYG A;  4OJO A;  1VBL A;  2BM4 A;  1TYV A;  4OJ5 A;  2VJI A;  3H09 A;  2VFM A;  2YUH A;  4U4B A;  2XTY A;  1O8M A;  3BH7 B;  2XC1 A;  3BH6 B;  1KQ5 A;  1RWR A; 
#chains in the Genus database with same CATH homology
 3SZE A;  2VFO A;  1WXR A;  4JRA C;  1CLW A;  2BM6 A;  1HF2 A;  1QRB A;  2VFP A;  2V5I A;  2IOU G;  1DAB A;  3ML3 A;  3SYJ A;  5JMC B;  4KH3 A;  3TH0 A;  3N6Z A;  3N90 A;  2W7Z A;  1QA1 A;  3JX8 A;  2BX6 A;  1QA3 A;  1K4Z A;  3LYC A;  3P4G A;  2XC1 A;  3PET A;  2G0Y A;  4OJP A;  4OM9 A;  2BM7 A;  1K8F A;  4OJL A;  1QQ1 A;  2VFN A;  4V02 C;  1QA2 A;  4OJ6 A;  3AK5 A;  5JLV C;  1TYU A;  3LJY A;  1TYX A;  2J8I A;  4OJO A;  1TYW A;  2BM4 A;  2F3L A;  3RIQ A;  1TYV A;  4OJ5 A;  2BM5 A;  3H09 A;  2VFM A;  2YUH A;  1QRC A;  4OPW A;  1TSP A;  2VFQ A;  3BH6 B;  1KQ5 A;  2B0R A;  3BH7 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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