2YUHA

Solution structure of the c-terminal region in human tubulin folding cofactor c
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
179
structure length
179
Chain Sequence
GSSGSSGSWVCGFSNLESQVLEKRASELHQRDVLLTELSNCTVRLYGNPNTLRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEERNIQWDSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Solution structure of the C-terminal region in human tubulin folding cofactor C
rcsb
source organism Homo sapiens
molecule tags Chaperone
molecule keywords Tubulin-specific chaperone C
total genus 27
structure length 179
sequence length 179
ec nomenclature
pdb deposition date 2007-04-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07986 TBCC Tubulin binding cofactor C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.160.20.70 Mainly Beta 3 Solenoid Pectate Lyase C-like Pectate Lyase C-like 2yuhA01
1KQ5A 4V02C 1HF2A 2B0RA 3BH7B 1K4ZA 2BX6A 1K8FA 2YUHA 3BH6B
chains in the Genus database with same CATH superfamily
2VFMA 1KCDA 2ODLA 2X85A 1OFDA 3SQVA 5JLVC 2VFQA 4OJPA 3SYJA 1IDKA 3EQOA 4JRAC 4NK8A 1KCCA 3KRGA 2IQ7A 2W7ZA 2XC1A 4YCQA 4XLHA 2BM7A 2O6WA 2O04A 4XLAA 3GQ8A 3UW0A 4XOPA 5DNSA 4OM9A 4XLEA 2J8IA 3GQ7A 1EA0A 2XTXA 3BH7B 2X6WA 1PE9A 1RU4A 2NTQA 4YEJA 1EZGA 4YZXA 4YFOA 1BN8A 2UVFA 4YC5A 4W8RA 4W8SA 4XLFA 1TYXA 2O17A 4XR6A 3LJYA 1JTAA 4OJ6A 1HG8A 1O8LA 2VFPA 1O88A 4XORA 3GQAA 2X6XA 1QA3A 2VBMA 3PETA 4MR0A 3B90A 4XQFA 1OFMA 3GQ9A 4YELA 3LMWA 3LYCA 1O8FA 4I84A 2VJIA 1CLWA 1TSPA 1DBGA 3WWGA 5JMCB 3TH0A 1LM1A 4XOTA 1WMRA 1DABA 1O8MA 2EWEA 1KQ5A 1OFEA 2INUA 1O8GA 4C2LA 3RIQA 2BM6A 2VJJA 4XONA 2QYUA 3VMVA 1TYVA 4W8TA 1QCXA 2J8KA 1OGMX 4OZYA 2XT2A 2VFNA 3ML3A 1O8HA 4OJ5A 1IB4A 1O8EA 2NT9A 1KTWA 3B4NA 2PYGA 4XM3A 1GQ8A 4Z05A 5AMVA 4U49A 3SZEA 1TYUA 1RMGA 3ZSCA 1QRBA 2B0RA 4OZZA 4YZAA 1K5CA 1TYWA 2PECA 4XLCA 4HWVA 2O0VA 2QY1A 4XKWA 1QA1A 3JX8A 4OJLA 1RWRA 3T9GA 2O0WA 2X3HA 2XTWA 1BHEA 3SY2A 1L1IA 1O8IA 1IDJA 1QJVA 3JURA 3ZPPA 4YZQA 1XG2A 2BM5A 2BX6A 1K8FA 2NZMA 2XT4A 2YUHA 4URRA 2UVEA 4XMYA 3BH6B 3DU1X 4OJOA 1LLZA 1WXRA 5C1EA 3AK5A 1QQ1A 4EW9A 3B8YA 1HF2A 2QXZA 4Z03A 1OOCA 3NAWA 4PMHA 2VFOA 5C1CA 1K4ZA 2XTYA 3PSSA 3EQNA 1X0CA 3N90A 1LLWA 1QRCA 4V02C 2INVA 1EE6A 2NSTA 4YEIA 2Z8GA 4MXNA 1VBLA 3N6ZA 2VBKA 4KH3A 4Z06A 1H80A 2BM4A 4W8QA 4NK6A 4XN0A 1DBOA 3NB2A 2QX3A 3VSUA 2IOUG 1PLUA 4XKVA 2PYHA 2V5IA 2NTBA 4U4BA 1QA2A 4YDTA 1PXZA 2BSPA 1JRGA 1O8KA 4YZ0A 2QZAA 3P4GA 2NTPA 1O8JA 1OGOX 2O1DA 1OFLA 4XL9A 4XN3A 3VSVA 3SUCA 1CZFA 1IA5A 3FY3A 3PSZA 4OPWA 3VMWA 2NSPA 1AIRA 3VSTA 1NHCA 2F3LA 1O8DA 2VBEA 2G0YA 4AVZA 2X6YA 3H09A 2NT6A 3GRHA 4XNFA
chains in the Genus database with same CATH topology
2VFMA 1TYUA 3N90A 4V02C 1QRCA 1QRBA 2B0RA 2VFPA 1TYWA 3N6ZA 4KH3A 1QA3A 5JLVC 2VFQA 3PETA 4OJPA 2BM4A 3SYJA 4JRAC 3SZEA 2W7ZA 2XC1A 3LYCA 1QA1A 2IOUG 1CLWA 2BM7A 1TSPA 2V5IA 3JX8A 4OJLA 3TH0A 5JMCB 1DABA 1QA2A 4OM9A 1KQ5A 2J8IA 3RIQA 2BM6A 3BH7B 3P4GA 2BM5A 2BX6A 1K8FA 1TYVA 2YUHA 3BH6B 4OJOA 1WXRA 2VFNA 3ML3A 4OPWA 4OJ5A 3AK5A 1QQ1A 1HF2A 2F3LA 1TYXA 1K4ZA 2VFOA 3LJYA 2G0YA 3H09A 4OJ6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KQ5 A;  4V02 C;  1HF2 A;  2B0R A;  3BH7 B;  1K4Z A;  2BX6 A;  1K8F A;  2YUH A;  3BH6 B; 
#chains in the Genus database with same CATH topology
 2VFM A;  1KCD A;  2ODL A;  2X85 A;  1OFD A;  3SQV A;  5JLV C;  2VFQ A;  4OJP A;  3SYJ A;  1IDK A;  3EQO A;  4JRA C;  4NK8 A;  1KCC A;  3KRG A;  2IQ7 A;  2W7Z A;  2XC1 A;  4YCQ A;  4XLH A;  2BM7 A;  2O6W A;  2O04 A;  4XLA A;  3GQ8 A;  3UW0 A;  4XOP A;  5DNS A;  4OM9 A;  4XLE A;  2J8I A;  3GQ7 A;  1EA0 A;  2XTX A;  3BH7 B;  2X6W A;  1PE9 A;  1RU4 A;  2NTQ A;  4YEJ A;  1EZG A;  4YZX A;  4YFO A;  1BN8 A;  2UVF A;  4YC5 A;  4W8R A;  4W8S A;  4XLF A;  1TYX A;  2O17 A;  4XR6 A;  3LJY A;  1JTA A;  4OJ6 A;  1HG8 A;  1O8L A;  2VFP A;  1O88 A;  4XOR A;  3GQA A;  2X6X A;  1QA3 A;  2VBM A;  3PET A;  4MR0 A;  3B90 A;  4XQF A;  1OFM A;  3GQ9 A;  4YEL A;  3LMW A;  3LYC A;  1O8F A;  4I84 A;  2VJI A;  1CLW A;  1TSP A;  1DBG A;  3WWG A;  5JMC B;  3TH0 A;  1LM1 A;  4XOT A;  1WMR A;  1DAB A;  1O8M A;  2EWE A;  1KQ5 A;  1OFE A;  2INU A;  1O8G A;  4C2L A;  3RIQ A;  2BM6 A;  2VJJ A;  4XON A;  2QYU A;  3VMV A;  1TYV A;  4W8T A;  1QCX A;  2J8K A;  1OGM X;  4OZY A;  2XT2 A;  2VFN A;  3ML3 A;  1O8H A;  4OJ5 A;  1IB4 A;  1O8E A;  2NT9 A;  1KTW A;  3B4N A;  2PYG A;  4XM3 A;  1GQ8 A;  4Z05 A;  5AMV A;  4U49 A;  3SZE A;  1TYU A;  1RMG A;  3ZSC A;  1QRB A;  2B0R A;  4OZZ A;  4YZA A;  1K5C A;  1TYW A;  2PEC A;  4XLC A;  4HWV A;  2O0V A;  2QY1 A;  4XKW A;  1QA1 A;  3JX8 A;  4OJL A;  1RWR A;  3T9G A;  2O0W A;  2X3H A;  2XTW A;  1BHE A;  3SY2 A;  1L1I A;  1O8I A;  1IDJ A;  1QJV A;  3JUR A;  3ZPP A;  4YZQ A;  1XG2 A;  2BM5 A;  2BX6 A;  1K8F A;  2NZM A;  2XT4 A;  2YUH A;  4URR A;  2UVE A;  4XMY A;  3BH6 B;  3DU1 X;  4OJO A;  1LLZ A;  1WXR A;  5C1E A;  3AK5 A;  1QQ1 A;  4EW9 A;  3B8Y A;  1HF2 A;  2QXZ A;  4Z03 A;  1OOC A;  3NAW A;  4PMH A;  2VFO A;  5C1C A;  1K4Z A;  2XTY A;  3PSS A;  3EQN A;  1X0C A;  3N90 A;  1LLW A;  1QRC A;  4V02 C;  2INV A;  1EE6 A;  2NST A;  4YEI A;  2Z8G A;  4MXN A;  1VBL A;  3N6Z A;  2VBK A;  4KH3 A;  4Z06 A;  1H80 A;  2BM4 A;  4W8Q A;  4NK6 A;  4XN0 A;  1DBO A;  3NB2 A;  2QX3 A;  3VSU A;  2IOU G;  1PLU A;  4XKV A;  2PYH A;  2V5I A;  2NTB A;  4U4B A;  1QA2 A;  4YDT A;  1PXZ A;  2BSP A;  1JRG A;  1O8K A;  4YZ0 A;  2QZA A;  3P4G A;  2NTP A;  1O8J A;  1OGO X;  2O1D A;  1OFL A;  4XL9 A;  4XN3 A;  3VSV A;  3SUC A;  1CZF A;  1IA5 A;  3FY3 A;  3PSZ A;  4OPW A;  3VMW A;  2NSP A;  1AIR A;  3VST A;  1NHC A;  2F3L A;  1O8D A;  2VBE A;  2G0Y A;  4AVZ A;  2X6Y A;  3H09 A;  2NT6 A;  3GRH A;  4XNF A; 
#chains in the Genus database with same CATH homology
 2VFM A;  1TYU A;  3N90 A;  4V02 C;  1QRC A;  1QRB A;  2B0R A;  2VFP A;  1TYW A;  3N6Z A;  4KH3 A;  1QA3 A;  5JLV C;  2VFQ A;  3PET A;  4OJP A;  2BM4 A;  3SYJ A;  4JRA C;  3SZE A;  2W7Z A;  2XC1 A;  3LYC A;  1QA1 A;  2IOU G;  1CLW A;  2BM7 A;  1TSP A;  2V5I A;  3JX8 A;  4OJL A;  3TH0 A;  5JMC B;  1DAB A;  1QA2 A;  4OM9 A;  1KQ5 A;  2J8I A;  3RIQ A;  2BM6 A;  3BH7 B;  3P4G A;  2BM5 A;  2BX6 A;  1K8F A;  1TYV A;  2YUH A;  3BH6 B;  4OJO A;  1WXR A;  2VFN A;  3ML3 A;  4OPW A;  4OJ5 A;  3AK5 A;  1QQ1 A;  1HF2 A;  2F3L A;  1TYX A;  1K4Z A;  2VFO A;  3LJY A;  2G0Y A;  3H09 A;  4OJ6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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