2Z1AA

Crystal structure of 5'-nucleotidase precursor from thermus thermophilus hb8
Total Genus 169
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
169
sequence length
507
structure length
507
Chain Sequence
FTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHRLRYRAMALGNHEFDLGPGPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTREISNPGPTVAFLDPYESAQKAVYELLAKGVNKIVVLSHLGYGEDLKLARRLVGVQVIVGGHSHTLLGSFPHKELSPAGPYPTVVKNPEGKDVLVVQAWEWGKVVGLLEVTFDAKGELLAYKGEALLMTPEAAPEDFFAKEALLAYAQPVMALMQQVIAEAKVDLVGERAVVRRRESNLGNLITDGMLWKTRNAGTQIALQNGGGIRASIPKGPITVGKVYEVLPFGNTLVVMDLKGKEILAALENGVSQWENTAGRFLQVSGLRYAFDLSRPAGSRVVRVEVKTEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKELKVVEAGLEGRIEVLNEP
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal structure of 5'-nucleotidase precursor from Thermus thermophilus HB8
rcsb
source organism Thermus thermophilus
molecule tags Hydrolase
molecule keywords 5'-nucleotidase
total genus 169
structure length 507
sequence length 507
ec nomenclature ec 3.1.3.5: 5'-nucleotidase.
pdb deposition date 2007-05-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
A PF02872 5_nucleotid_C 5'-nucleotidase, C-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2z1aA01
3.90.780.10 Alpha Beta Alpha-Beta Complex 5'-nucleotidase; domain 2 5'-Nucleotidase, C-terminal domain 2z1aA02
2WDDA 3H66A 1T71A 3PSNA 3RL5A 4UT3B 3DSCA 4KBPA 4H2GA 3T1IA 4G9JA 4UWQA 1S3NA 4LACC 4DSYA 1UTEA 3H63A 3K7VC 4LU9A 1U32A 2NYMC 2QFPA 4FCXA 3DW8C 4J6OA 1S3LA 2HYPA 2IE3C 4M0VA 4MP0A 1G5BA 1II7A 4V0WA 4MOVA 3PSOA 3IVDA 4TUIA 3E7BA 1USHA 4ORBA 1M63A 4FBWA 1T70A 5INBA 4FBQA 3RQZA 2BQ8X 1OI8A 2QFRA 3ZTVA 2ZBMA 5JPEA 2KKNA 4OR9A 3H62B 3H67A 1JK7A 4XPNA 4Q7FA 4I5NC 3H61A 3H64A 4V0VA 1OIEA 1WARA 4I5LC 3TGHA 1UF3A 4H1YP 2WDEA 2JOGA 2NYLC 3ICFA 1OIDA 4HD0A 3LL8A 1NNWA 4IL1A 2NXFA 3QFOA 1TCOA 3THNA 5JJTA 4DHLA 3RL4A 1MF8A 3N5UA 4YKEA 5C1VA 4B2OA 3KBPA 3P71C 5EQVA 3QFNA 5JPFA 4F0ZA 2HY1A 1SU1A 1XM7A 4NZVA 3V4YA 2QJCA 4UT3A 2BDXA 1IT6A 5J28A 2O8GA 4ORAA 2Z06A 3IVEA 3GVEA 1S8EA 2HYOA 2USHA 3HVQA 4MOYA 3H60A 3AUZA 5IOHA 2DFJA 3DSDA 3IB8A 1KBPA 4H2IA 2YVTA 1S70A 3H69A 4LTYA 4UT2A 4O5GA 4KKZA 2WDCA 1QHWA 3C9FA 3QFKA 4O24A 4JA9A 1AUIA 3H68A 3K7WC 4JA7A 4WWLA 4O43A 2Z1AA 4TUGA 2AHDA 2CV9A 1HO5A 1HPUA 1S95A 2XMOA 2NPPC 4H2FA 4H2BA 4ZVZA 3ZU0A 4ZX2A 5GTUA 3CK2A 2O8AA 3FGAC 5B8IA 3EGGA 2R17A 1V73A 2IAEC 2Z72A 3AV0A 4O4KA 5F3WA 1FJMA 3IB7A 5DNYA 2A22A 4V0XA 1S3MA 3JYFA 2IE4C 4IYPC 2P6BA 1Z2XA 2WDFA 5HPEA 3QG5C 2GJUA 1W24A 4H1SA 3THOB 4FBKA 4ORCA 2Q8UA 3EGHA 1HP1A 1QFCA 3E7AA 3RL3A 1Z2WA 3C5WC 1WAO1 2BCDA 4DT2A 1XZWA 3QFMA
chains in the Genus database with same CATH superfamily
2WDDA 3H66A 1T71A 3PSNA 3RL5A 4UT3B 3DSCA 4KBPA 4H2GA 3T1IA 4G9JA 2DXNA 4UWQA 1S3NA 3D03A 4LACC 4DSYA 1UTEA 3H63A 3K7VC 4LU9A 1U32A 2NYMC 2QFPA 4FCXA 3DW8C 4J6OA 1S3LA 2HYPA 2IE3C 4M0VA 4MP0A 1G5BA 1II7A 4V0WA 4MOVA 3PSOA 3IVDA 4TUIA 3E7BA 1USHA 4ORBA 1M63A 4FBWA 1T70A 5INBA 4FBQA 3RQZA 2BQ8X 1OI8A 2QFRA 3ZTVA 2ZBMA 5JPEA 2KKNA 4OR9A 3H62B 3H67A 1JK7A 4XPNA 4Q7FA 4I5NC 3H61A 3H64A 4V0VA 1OIEA 1WARA 4I5LC 3TGHA 1UF3A 4H1YP 2WDEA 2JOGA 2NYLC 3ICFA 1OIDA 4HD0A 3LL8A 1NNWA 4IL1A 2NXFA 3QFOA 1TCOA 3THNA 5JJTA 4DHLA 3RL4A 1MF8A 3N5UA 4YKEA 5C1VA 4B2OA 3KBPA 3P71C 5EQVA 3QFNA 5JPFA 4F0ZA 3FLOA 2HY1A 1SU1A 1XM7A 4NZVA 3V4YA 2QJCA 4UT3A 2BDXA 1IT6A 5J28A 2O8GA 4ORAA 2Z06A 3IVEA 3GVEA 1S8EA 2HYOA 2USHA 3HVQA 4MOYA 3H60A 3AUZA 5IOHA 2DFJA 2ZO9B 2ZOAA 3DSDA 3IB8A 1KBPA 4H2IA 2DXLA 2YVTA 1S70A 3H69A 4LTYA 4UT2A 4O5GA 4KKZA 2WDCA 1QHWA 3C9FA 3QFKA 4O24A 4JA9A 1AUIA 3H68A 3K7WC 4JA7A 4WWLA 4O43A 2Z1AA 4TUGA 2AHDA 2CV9A 1HO5A 1HPUA 1S95A 2XMOA 2NPPC 4H2FA 3E0JA 4H2BA 4ZVZA 3ZU0A 2YEQA 4ZX2A 5GTUA 3CK2A 2O8AA 3FGAC 5B8IA 3EGGA 2R17A 1V73A 2IAEC 2Z72A 3AV0A 4O4KA 5F3WA 1FJMA 3IB7A 5DNYA 2A22A 4V0XA 1S3MA 3JYFA 2IE4C 4IYPC 2P6BA 1Z2XA 2WDFA 5HPEA 3QG5C 2GJUA 1W24A 4H1SA 3THOB 4FBKA 4ORCA 2Q8UA 3EGHA 1HP1A 1QFCA 3E7AA 3RL3A 1Z2WA 3C5WC 1WAO1 2BCDA 4DT2A 1XZWA 3QFMA
chains in the Genus database with same CATH topology
2WDDA 3H66A 1T71A 3PSNA 3RL5A 4UT3B 3DSCA 4KBPA 4H2GA 3T1IA 4G9JA 2DXNA 4UWQA 1S3NA 3D03A 4LACC 4DSYA 1UTEA 3H63A 3K7VC 4LU9A 1U32A 2NYMC 2QFPA 4FCXA 3DW8C 4J6OA 1S3LA 2HYPA 2IE3C 4M0VA 4MP0A 1G5BA 1II7A 4V0WA 4MOVA 3PSOA 3IVDA 4TUIA 3E7BA 1USHA 4ORBA 1M63A 4FBWA 1T70A 5INBA 4FBQA 3RQZA 2BQ8X 1OI8A 2QFRA 3ZTVA 2ZBMA 5JPEA 2KKNA 4OR9A 3H62B 3H67A 1JK7A 4XPNA 4Q7FA 4I5NC 3H61A 3H64A 4V0VA 1OIEA 1WARA 4I5LC 3TGHA 1UF3A 4H1YP 2WDEA 2JOGA 2NYLC 3ICFA 1OIDA 4HD0A 3LL8A 1NNWA 4IL1A 2NXFA 3QFOA 1TCOA 3THNA 5JJTA 4DHLA 3RL4A 1MF8A 3N5UA 4YKEA 5C1VA 4B2OA 3KBPA 3P71C 5EQVA 3QFNA 5JPFA 4F0ZA 3FLOA 2HY1A 1SU1A 1XM7A 4NZVA 3V4YA 2QJCA 4UT3A 2BDXA 1IT6A 5J28A 2O8GA 4ORAA 2Z06A 3IVEA 3GVEA 1S8EA 2HYOA 2USHA 3HVQA 4MOYA 3H60A 3AUZA 5IOHA 2DFJA 2ZO9B 2ZOAA 3DSDA 3IB8A 1KBPA 4H2IA 2DXLA 2YVTA 1S70A 3H69A 4LTYA 4UT2A 4O5GA 4KKZA 2WDCA 1QHWA 3C9FA 3QFKA 4O24A 4JA9A 1AUIA 3H68A 3K7WC 4JA7A 4WWLA 4O43A 2Z1AA 4TUGA 2AHDA 2CV9A 1HO5A 1HPUA 1S95A 2XMOA 2NPPC 4H2FA 3E0JA 4H2BA 4ZVZA 3ZU0A 2YEQA 4ZX2A 5GTUA 3CK2A 2O8AA 3FGAC 5B8IA 3EGGA 2R17A 1V73A 2IAEC 2Z72A 3AV0A 4O4KA 5F3WA 1FJMA 3IB7A 5DNYA 2A22A 4V0XA 1S3MA 3JYFA 2IE4C 4IYPC 2P6BA 1Z2XA 2WDFA 5HPEA 3QG5C 2GJUA 1W24A 4H1SA 3THOB 4FBKA 4ORCA 2Q8UA 3EGHA 1HP1A 1QFCA 3E7AA 3RL3A 1Z2WA 3C5WC 1WAO1 2BCDA 4DT2A 1XZWA 3QFMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2WDD A;  3H66 A;  1T71 A;  3PSN A;  3RL5 A;  4UT3 B;  3DSC A;  4KBP A;  4H2G A;  3T1I A;  4G9J A;  4UWQ A;  1S3N A;  4LAC C;  4DSY A;  1UTE A;  3H63 A;  3K7V C;  4LU9 A;  1U32 A;  2NYM C;  2QFP A;  4FCX A;  3DW8 C;  4J6O A;  1S3L A;  2HYP A;  2IE3 C;  4M0V A;  4MP0 A;  1G5B A;  1II7 A;  4V0W A;  4MOV A;  3PSO A;  3IVD A;  4TUI A;  3E7B A;  1USH A;  4ORB A;  1M63 A;  4FBW A;  1T70 A;  5INB A;  4FBQ A;  3RQZ A;  2BQ8 X;  1OI8 A;  2QFR A;  3ZTV A;  2ZBM A;  5JPE A;  2KKN A;  4OR9 A;  3H62 B;  3H67 A;  1JK7 A;  4XPN A;  4Q7F A;  4I5N C;  3H61 A;  3H64 A;  4V0V A;  1OIE A;  1WAR A;  4I5L C;  3TGH A;  1UF3 A;  4H1Y P;  2WDE A;  2JOG A;  2NYL C;  3ICF A;  1OID A;  4HD0 A;  3LL8 A;  1NNW A;  4IL1 A;  2NXF A;  3QFO A;  1TCO A;  3THN A;  5JJT A;  4DHL A;  3RL4 A;  1MF8 A;  3N5U A;  4YKE A;  5C1V A;  4B2O A;  3KBP A;  3P71 C;  5EQV A;  3QFN A;  5JPF A;  4F0Z A;  2HY1 A;  1SU1 A;  1XM7 A;  4NZV A;  3V4Y A;  2QJC A;  4UT3 A;  2BDX A;  1IT6 A;  5J28 A;  2O8G A;  4ORA A;  2Z06 A;  3IVE A;  3GVE A;  1S8E A;  2HYO A;  2USH A;  3HVQ A;  4MOY A;  3H60 A;  3AUZ A;  5IOH A;  2DFJ A;  3DSD A;  3IB8 A;  1KBP A;  4H2I A;  2YVT A;  1S70 A;  3H69 A;  4LTY A;  4UT2 A;  4O5G A;  4KKZ A;  2WDC A;  1QHW A;  3C9F A;  3QFK A;  4O24 A;  4JA9 A;  1AUI A;  3H68 A;  3K7W C;  4JA7 A;  4WWL A;  4O43 A;  2Z1A A;  4TUG A;  2AHD A;  2CV9 A;  1HO5 A;  1HPU A;  1S95 A;  2XMO A;  2NPP C;  4H2F A;  4H2B A;  4ZVZ A;  3ZU0 A;  4ZX2 A;  5GTU A;  3CK2 A;  2O8A A;  3FGA C;  5B8I A;  3EGG A;  2R17 A;  1V73 A;  2IAE C;  2Z72 A;  3AV0 A;  4O4K A;  5F3W A;  1FJM A;  3IB7 A;  5DNY A;  2A22 A;  4V0X A;  1S3M A;  3JYF A;  2IE4 C;  4IYP C;  2P6B A;  1Z2X A;  2WDF A;  5HPE A;  3QG5 C;  2GJU A;  1W24 A;  4H1S A;  3THO B;  4FBK A;  4ORC A;  2Q8U A;  3EGH A;  1HP1 A;  1QFC A;  3E7A A;  3RL3 A;  1Z2W A;  3C5W C;  1WAO 1;  2BCD A;  4DT2 A;  1XZW A;  3QFM A; 
#chains in the Genus database with same CATH topology
 2WDD A;  3H66 A;  1T71 A;  3PSN A;  3RL5 A;  4UT3 B;  3DSC A;  4KBP A;  4H2G A;  3T1I A;  4G9J A;  2DXN A;  4UWQ A;  1S3N A;  3D03 A;  4LAC C;  4DSY A;  1UTE A;  3H63 A;  3K7V C;  4LU9 A;  1U32 A;  2NYM C;  2QFP A;  4FCX A;  3DW8 C;  4J6O A;  1S3L A;  2HYP A;  2IE3 C;  4M0V A;  4MP0 A;  1G5B A;  1II7 A;  4V0W A;  4MOV A;  3PSO A;  3IVD A;  4TUI A;  3E7B A;  1USH A;  4ORB A;  1M63 A;  4FBW A;  1T70 A;  5INB A;  4FBQ A;  3RQZ A;  2BQ8 X;  1OI8 A;  2QFR A;  3ZTV A;  2ZBM A;  5JPE A;  2KKN A;  4OR9 A;  3H62 B;  3H67 A;  1JK7 A;  4XPN A;  4Q7F A;  4I5N C;  3H61 A;  3H64 A;  4V0V A;  1OIE A;  1WAR A;  4I5L C;  3TGH A;  1UF3 A;  4H1Y P;  2WDE A;  2JOG A;  2NYL C;  3ICF A;  1OID A;  4HD0 A;  3LL8 A;  1NNW A;  4IL1 A;  2NXF A;  3QFO A;  1TCO A;  3THN A;  5JJT A;  4DHL A;  3RL4 A;  1MF8 A;  3N5U A;  4YKE A;  5C1V A;  4B2O A;  3KBP A;  3P71 C;  5EQV A;  3QFN A;  5JPF A;  4F0Z A;  3FLO A;  2HY1 A;  1SU1 A;  1XM7 A;  4NZV A;  3V4Y A;  2QJC A;  4UT3 A;  2BDX A;  1IT6 A;  5J28 A;  2O8G A;  4ORA A;  2Z06 A;  3IVE A;  3GVE A;  1S8E A;  2HYO A;  2USH A;  3HVQ A;  4MOY A;  3H60 A;  3AUZ A;  5IOH A;  2DFJ A;  2ZO9 B;  2ZOA A;  3DSD A;  3IB8 A;  1KBP A;  4H2I A;  2DXL A;  2YVT A;  1S70 A;  3H69 A;  4LTY A;  4UT2 A;  4O5G A;  4KKZ A;  2WDC A;  1QHW A;  3C9F A;  3QFK A;  4O24 A;  4JA9 A;  1AUI A;  3H68 A;  3K7W C;  4JA7 A;  4WWL A;  4O43 A;  2Z1A A;  4TUG A;  2AHD A;  2CV9 A;  1HO5 A;  1HPU A;  1S95 A;  2XMO A;  2NPP C;  4H2F A;  3E0J A;  4H2B A;  4ZVZ A;  3ZU0 A;  2YEQ A;  4ZX2 A;  5GTU A;  3CK2 A;  2O8A A;  3FGA C;  5B8I A;  3EGG A;  2R17 A;  1V73 A;  2IAE C;  2Z72 A;  3AV0 A;  4O4K A;  5F3W A;  1FJM A;  3IB7 A;  5DNY A;  2A22 A;  4V0X A;  1S3M A;  3JYF A;  2IE4 C;  4IYP C;  2P6B A;  1Z2X A;  2WDF A;  5HPE A;  3QG5 C;  2GJU A;  1W24 A;  4H1S A;  3THO B;  4FBK A;  4ORC A;  2Q8U A;  3EGH A;  1HP1 A;  1QFC A;  3E7A A;  3RL3 A;  1Z2W A;  3C5W C;  1WAO 1;  2BCD A;  4DT2 A;  1XZW A;  3QFM A; 
#chains in the Genus database with same CATH homology
 2WDD A;  3H66 A;  1T71 A;  3PSN A;  3RL5 A;  4UT3 B;  3DSC A;  4KBP A;  4H2G A;  3T1I A;  4G9J A;  2DXN A;  4UWQ A;  1S3N A;  3D03 A;  4LAC C;  4DSY A;  1UTE A;  3H63 A;  3K7V C;  4LU9 A;  1U32 A;  2NYM C;  2QFP A;  4FCX A;  3DW8 C;  4J6O A;  1S3L A;  2HYP A;  2IE3 C;  4M0V A;  4MP0 A;  1G5B A;  1II7 A;  4V0W A;  4MOV A;  3PSO A;  3IVD A;  4TUI A;  3E7B A;  1USH A;  4ORB A;  1M63 A;  4FBW A;  1T70 A;  5INB A;  4FBQ A;  3RQZ A;  2BQ8 X;  1OI8 A;  2QFR A;  3ZTV A;  2ZBM A;  5JPE A;  2KKN A;  4OR9 A;  3H62 B;  3H67 A;  1JK7 A;  4XPN A;  4Q7F A;  4I5N C;  3H61 A;  3H64 A;  4V0V A;  1OIE A;  1WAR A;  4I5L C;  3TGH A;  1UF3 A;  4H1Y P;  2WDE A;  2JOG A;  2NYL C;  3ICF A;  1OID A;  4HD0 A;  3LL8 A;  1NNW A;  4IL1 A;  2NXF A;  3QFO A;  1TCO A;  3THN A;  5JJT A;  4DHL A;  3RL4 A;  1MF8 A;  3N5U A;  4YKE A;  5C1V A;  4B2O A;  3KBP A;  3P71 C;  5EQV A;  3QFN A;  5JPF A;  4F0Z A;  3FLO A;  2HY1 A;  1SU1 A;  1XM7 A;  4NZV A;  3V4Y A;  2QJC A;  4UT3 A;  2BDX A;  1IT6 A;  5J28 A;  2O8G A;  4ORA A;  2Z06 A;  3IVE A;  3GVE A;  1S8E A;  2HYO A;  2USH A;  3HVQ A;  4MOY A;  3H60 A;  3AUZ A;  5IOH A;  2DFJ A;  2ZO9 B;  2ZOA A;  3DSD A;  3IB8 A;  1KBP A;  4H2I A;  2DXL A;  2YVT A;  1S70 A;  3H69 A;  4LTY A;  4UT2 A;  4O5G A;  4KKZ A;  2WDC A;  1QHW A;  3C9F A;  3QFK A;  4O24 A;  4JA9 A;  1AUI A;  3H68 A;  3K7W C;  4JA7 A;  4WWL A;  4O43 A;  2Z1A A;  4TUG A;  2AHD A;  2CV9 A;  1HO5 A;  1HPU A;  1S95 A;  2XMO A;  2NPP C;  4H2F A;  3E0J A;  4H2B A;  4ZVZ A;  3ZU0 A;  2YEQ A;  4ZX2 A;  5GTU A;  3CK2 A;  2O8A A;  3FGA C;  5B8I A;  3EGG A;  2R17 A;  1V73 A;  2IAE C;  2Z72 A;  3AV0 A;  4O4K A;  5F3W A;  1FJM A;  3IB7 A;  5DNY A;  2A22 A;  4V0X A;  1S3M A;  3JYF A;  2IE4 C;  4IYP C;  2P6B A;  1Z2X A;  2WDF A;  5HPE A;  3QG5 C;  2GJU A;  1W24 A;  4H1S A;  3THO B;  4FBK A;  4ORC A;  2Q8U A;  3EGH A;  1HP1 A;  1QFC A;  3E7A A;  3RL3 A;  1Z2W A;  3C5W C;  1WAO 1;  2BCD A;  4DT2 A;  1XZW A;  3QFM A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...