2Z72A

New structure of cold-active protein tyrosine phosphatase at 1.1 angstrom
Total Genus 122
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
338
structure length
338
Chain Sequence
ATEFDGPYVITPISGQSTAYWICDNRLKTTSIEKLQVNRPEHCGDLPETKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVGKSGELLLLENNRLIRGLYDGTRETLQENSLNQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase
pubmed doi rcsb
source organism Shewanella sp.
molecule tags Hydrolase
molecule keywords Protein-tyrosine-phosphatase
total genus 122
structure length 338
sequence length 338
ec nomenclature ec 3.1.3.48: Protein-tyrosine-phosphatase.
pdb deposition date 2007-08-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2z72A00
3K7WC 4V0XA 2USHA 4O4KA 4LU9A 3K7VC 3RL5A 3H62B 3DW8C 2NYMC 2WDFA 2QFRA 3DSDA 4Q7FA 3EGGA 3IB7A 3H66A 4UT3B 1S70A 4M0VA 1HP1A 2BCDA 2A22A 1V73A 1AUIA 4H1YP 2Z1AA 3GVEA 4O5GA 3CK2A 1KBPA 4MOYA 3H67A 2HYOA 1QFCA 1FJMA 1NNWA 3H64A 2O8AA 2Q8UA 4V0WA 3C9FA 4HD0A 4B2OA 5C1VA 5B8IA 4J6OA 3H61A 2KKNA 2NPPC 4KKZA 4TUGA 4TUIA 1M63A 2P6BA 2YVTA 4UWQA 1XZWA 1SU1A 5J28A 4O24A 5JPFA 4JA7A 3H69A 4H1SA 1OIDA 5DNYA 5HPEA 3ZTVA 2GJUA 5INBA 4V0VA 4G9JA 3RL4A 4H2BA 2IE3C 3ZU0A 1TCOA 4FCXA 3QFNA 5IOHA 2XMOA 1USHA 2Z72A 1HO5A 3E7BA 3H60A 4DSYA 4DHLA 2AHDA 4OR9A 4IL1A 4IYPC 3V4YA 1Z2WA 1S3MA 4UT2A 2IE4C 3HVQA 1WARA 4UT3A 3EGHA 1UF3A 3QFKA 3IB8A 2HY1A 3FGAC 3E7AA 1S3LA 3TGHA 1XM7A 1HPUA 4H2IA 1T71A 2CV9A 4H2GA 4XPNA 4KBPA 4ZVZA 3PSOA 3THOB 3H63A 1Z2XA 4ORAA 5EQVA 2WDDA 4ORBA 4LTYA 2NXFA 2HYPA 3QG5C 2BDXA 3IVEA 1JK7A 2R17A 3DSCA 1T70A 3T1IA 2O8GA 2IAEC 1S95A 3C5WC 1QHWA 3QFMA 3AUZA 1WAO1 3P71C 4ORCA 4MP0A 4FBQA 3ICFA 4FBKA 3LL8A 5F3WA 3N5UA 3RL3A 1U32A 1OIEA 2NYLC 4LACC 3PSNA 1II7A 4ZX2A 1IT6A 1MF8A 1W24A 4WWLA 4YKEA 4FBWA 5JPEA 3IVDA 4I5NC 2BQ8X 3THNA 2QFPA 2QJCA 5JJTA 1G5BA 3RQZA 1S8EA 2WDEA 4NZVA 4DT2A 3AV0A 4H2FA 1UTEA 2ZBMA 4O43A 2Z06A 2WDCA 2JOGA 2DFJA 4JA9A 5GTUA 4MOVA 3KBPA 3QFOA 1OI8A 3JYFA 4F0ZA 3H68A 1S3NA 4I5LC
chains in the Genus database with same CATH superfamily
3K7WC 4V0XA 2USHA 4O4KA 4LU9A 3K7VC 3RL5A 3H62B 3DW8C 2NYMC 2WDFA 2QFRA 3DSDA 4Q7FA 3EGGA 3IB7A 3H66A 4UT3B 1S70A 4M0VA 1HP1A 2BCDA 2A22A 1V73A 1AUIA 4H1YP 2Z1AA 3GVEA 4O5GA 3CK2A 1KBPA 4MOYA 3H67A 2HYOA 1QFCA 1FJMA 1NNWA 3H64A 2O8AA 2Q8UA 4V0WA 3C9FA 4HD0A 4B2OA 5C1VA 5B8IA 4J6OA 3H61A 2KKNA 2NPPC 4KKZA 4TUGA 4TUIA 1M63A 2P6BA 2YVTA 4UWQA 1XZWA 1SU1A 5J28A 4O24A 5JPFA 2ZOAA 4JA7A 3H69A 4H1SA 1OIDA 5DNYA 5HPEA 3ZTVA 2GJUA 3FLOA 5INBA 4V0VA 4G9JA 3RL4A 4H2BA 2IE3C 3ZU0A 1TCOA 4FCXA 3QFNA 5IOHA 2XMOA 1USHA 2Z72A 1HO5A 3E7BA 3H60A 4DSYA 4DHLA 2AHDA 4OR9A 4IL1A 4IYPC 3V4YA 1Z2WA 1S3MA 4UT2A 2IE4C 3HVQA 2DXNA 1WARA 4UT3A 3EGHA 1UF3A 3QFKA 3IB8A 2HY1A 3FGAC 3E7AA 1S3LA 3TGHA 1XM7A 1HPUA 4H2IA 1T71A 2CV9A 4H2GA 4XPNA 4KBPA 4ZVZA 3PSOA 3THOB 3H63A 1Z2XA 4ORAA 5EQVA 2WDDA 2DXLA 4ORBA 4LTYA 2NXFA 2HYPA 3QG5C 2BDXA 3IVEA 1JK7A 2R17A 3DSCA 1T70A 3T1IA 2O8GA 2IAEC 1S95A 3C5WC 1QHWA 3QFMA 3AUZA 1WAO1 3P71C 4ORCA 4MP0A 4FBQA 3ICFA 4FBKA 3LL8A 5F3WA 3N5UA 3RL3A 1U32A 1OIEA 2NYLC 4LACC 3PSNA 1II7A 4ZX2A 1IT6A 1MF8A 1W24A 4WWLA 4YKEA 4FBWA 5JPEA 3IVDA 2ZO9B 4I5NC 2BQ8X 2YEQA 3THNA 2QFPA 2QJCA 5JJTA 1G5BA 3RQZA 1S8EA 2WDEA 4NZVA 4DT2A 3AV0A 4H2FA 1UTEA 2ZBMA 4I5LC 4O43A 2Z06A 2WDCA 2JOGA 2DFJA 4JA9A 5GTUA 4MOVA 3KBPA 3QFOA 3E0JA 1OI8A 3JYFA 4F0ZA 3H68A 1S3NA 3D03A
chains in the Genus database with same CATH topology
3K7WC 4V0XA 2USHA 4O4KA 4LU9A 3K7VC 3RL5A 3H62B 3DW8C 2NYMC 2WDFA 2QFRA 3DSDA 4Q7FA 3EGGA 3IB7A 3H66A 4UT3B 1S70A 4M0VA 1HP1A 2BCDA 2A22A 1V73A 1AUIA 4H1YP 2Z1AA 3GVEA 4O5GA 3CK2A 1KBPA 4MOYA 3H67A 2HYOA 1QFCA 1FJMA 1NNWA 3H64A 2O8AA 2Q8UA 4V0WA 3C9FA 4HD0A 4B2OA 5C1VA 5B8IA 4J6OA 3H61A 2KKNA 2NPPC 4KKZA 4TUGA 4TUIA 1M63A 2P6BA 2YVTA 4UWQA 1XZWA 1SU1A 5J28A 4O24A 5JPFA 2ZOAA 4JA7A 3H69A 4H1SA 1OIDA 5DNYA 5HPEA 3ZTVA 2GJUA 3FLOA 5INBA 4V0VA 4G9JA 3RL4A 4H2BA 2IE3C 3ZU0A 1TCOA 4FCXA 3QFNA 5IOHA 2XMOA 1USHA 2Z72A 1HO5A 3E7BA 3H60A 4DSYA 4DHLA 2AHDA 4OR9A 4IL1A 4IYPC 3V4YA 1Z2WA 1S3MA 4UT2A 2IE4C 3HVQA 2DXNA 1WARA 4UT3A 3EGHA 1UF3A 3QFKA 3IB8A 2HY1A 3FGAC 3E7AA 1S3LA 3TGHA 1XM7A 1HPUA 4H2IA 1T71A 2CV9A 4H2GA 4XPNA 4KBPA 4ZVZA 3PSOA 3THOB 3H63A 1Z2XA 4ORAA 5EQVA 2WDDA 2DXLA 4ORBA 4LTYA 2NXFA 2HYPA 3QG5C 2BDXA 3IVEA 1JK7A 2R17A 3DSCA 1T70A 3T1IA 2O8GA 2IAEC 1S95A 3C5WC 1QHWA 3QFMA 3AUZA 1WAO1 3P71C 4ORCA 4MP0A 4FBQA 3ICFA 4FBKA 3LL8A 5F3WA 3N5UA 3RL3A 1U32A 1OIEA 2NYLC 4LACC 3PSNA 1II7A 4ZX2A 1IT6A 1MF8A 1W24A 4WWLA 4YKEA 4FBWA 5JPEA 3IVDA 2ZO9B 4I5NC 2BQ8X 2YEQA 3THNA 2QFPA 2QJCA 5JJTA 1G5BA 3RQZA 1S8EA 2WDEA 4NZVA 4DT2A 3AV0A 4H2FA 1UTEA 2ZBMA 4I5LC 4O43A 2Z06A 2WDCA 2JOGA 2DFJA 4JA9A 5GTUA 4MOVA 3KBPA 3QFOA 3E0JA 1OI8A 3JYFA 4F0ZA 3H68A 1S3NA 3D03A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K7W C;  4V0X A;  2USH A;  4O4K A;  4LU9 A;  3K7V C;  3RL5 A;  3H62 B;  3DW8 C;  2NYM C;  2WDF A;  2QFR A;  3DSD A;  4Q7F A;  3EGG A;  3IB7 A;  3H66 A;  4UT3 B;  1S70 A;  4M0V A;  1HP1 A;  2BCD A;  2A22 A;  1V73 A;  1AUI A;  4H1Y P;  2Z1A A;  3GVE A;  4O5G A;  3CK2 A;  1KBP A;  4MOY A;  3H67 A;  2HYO A;  1QFC A;  1FJM A;  1NNW A;  3H64 A;  2O8A A;  2Q8U A;  4V0W A;  3C9F A;  4HD0 A;  4B2O A;  5C1V A;  5B8I A;  4J6O A;  3H61 A;  2KKN A;  2NPP C;  4KKZ A;  4TUG A;  4TUI A;  1M63 A;  2P6B A;  2YVT A;  4UWQ A;  1XZW A;  1SU1 A;  5J28 A;  4O24 A;  5JPF A;  4JA7 A;  3H69 A;  4H1S A;  1OID A;  5DNY A;  5HPE A;  3ZTV A;  2GJU A;  5INB A;  4V0V A;  4G9J A;  3RL4 A;  4H2B A;  2IE3 C;  3ZU0 A;  1TCO A;  4FCX A;  3QFN A;  5IOH A;  2XMO A;  1USH A;  2Z72 A;  1HO5 A;  3E7B A;  3H60 A;  4DSY A;  4DHL A;  2AHD A;  4OR9 A;  4IL1 A;  4IYP C;  3V4Y A;  1Z2W A;  1S3M A;  4UT2 A;  2IE4 C;  3HVQ A;  1WAR A;  4UT3 A;  3EGH A;  1UF3 A;  3QFK A;  3IB8 A;  2HY1 A;  3FGA C;  3E7A A;  1S3L A;  3TGH A;  1XM7 A;  1HPU A;  4H2I A;  1T71 A;  2CV9 A;  4H2G A;  4XPN A;  4KBP A;  4ZVZ A;  3PSO A;  3THO B;  3H63 A;  1Z2X A;  4ORA A;  5EQV A;  2WDD A;  4ORB A;  4LTY A;  2NXF A;  2HYP A;  3QG5 C;  2BDX A;  3IVE A;  1JK7 A;  2R17 A;  3DSC A;  1T70 A;  3T1I A;  2O8G A;  2IAE C;  1S95 A;  3C5W C;  1QHW A;  3QFM A;  3AUZ A;  1WAO 1;  3P71 C;  4ORC A;  4MP0 A;  4FBQ A;  3ICF A;  4FBK A;  3LL8 A;  5F3W A;  3N5U A;  3RL3 A;  1U32 A;  1OIE A;  2NYL C;  4LAC C;  3PSN A;  1II7 A;  4ZX2 A;  1IT6 A;  1MF8 A;  1W24 A;  4WWL A;  4YKE A;  4FBW A;  5JPE A;  3IVD A;  4I5N C;  2BQ8 X;  3THN A;  2QFP A;  2QJC A;  5JJT A;  1G5B A;  3RQZ A;  1S8E A;  2WDE A;  4NZV A;  4DT2 A;  3AV0 A;  4H2F A;  1UTE A;  2ZBM A;  4O43 A;  2Z06 A;  2WDC A;  2JOG A;  2DFJ A;  4JA9 A;  5GTU A;  4MOV A;  3KBP A;  3QFO A;  1OI8 A;  3JYF A;  4F0Z A;  3H68 A;  1S3N A;  4I5L C; 
#chains in the Genus database with same CATH topology
 3K7W C;  4V0X A;  2USH A;  4O4K A;  4LU9 A;  3K7V C;  3RL5 A;  3H62 B;  3DW8 C;  2NYM C;  2WDF A;  2QFR A;  3DSD A;  4Q7F A;  3EGG A;  3IB7 A;  3H66 A;  4UT3 B;  1S70 A;  4M0V A;  1HP1 A;  2BCD A;  2A22 A;  1V73 A;  1AUI A;  4H1Y P;  2Z1A A;  3GVE A;  4O5G A;  3CK2 A;  1KBP A;  4MOY A;  3H67 A;  2HYO A;  1QFC A;  1FJM A;  1NNW A;  3H64 A;  2O8A A;  2Q8U A;  4V0W A;  3C9F A;  4HD0 A;  4B2O A;  5C1V A;  5B8I A;  4J6O A;  3H61 A;  2KKN A;  2NPP C;  4KKZ A;  4TUG A;  4TUI A;  1M63 A;  2P6B A;  2YVT A;  4UWQ A;  1XZW A;  1SU1 A;  5J28 A;  4O24 A;  5JPF A;  2ZOA A;  4JA7 A;  3H69 A;  4H1S A;  1OID A;  5DNY A;  5HPE A;  3ZTV A;  2GJU A;  3FLO A;  5INB A;  4V0V A;  4G9J A;  3RL4 A;  4H2B A;  2IE3 C;  3ZU0 A;  1TCO A;  4FCX A;  3QFN A;  5IOH A;  2XMO A;  1USH A;  2Z72 A;  1HO5 A;  3E7B A;  3H60 A;  4DSY A;  4DHL A;  2AHD A;  4OR9 A;  4IL1 A;  4IYP C;  3V4Y A;  1Z2W A;  1S3M A;  4UT2 A;  2IE4 C;  3HVQ A;  2DXN A;  1WAR A;  4UT3 A;  3EGH A;  1UF3 A;  3QFK A;  3IB8 A;  2HY1 A;  3FGA C;  3E7A A;  1S3L A;  3TGH A;  1XM7 A;  1HPU A;  4H2I A;  1T71 A;  2CV9 A;  4H2G A;  4XPN A;  4KBP A;  4ZVZ A;  3PSO A;  3THO B;  3H63 A;  1Z2X A;  4ORA A;  5EQV A;  2WDD A;  2DXL A;  4ORB A;  4LTY A;  2NXF A;  2HYP A;  3QG5 C;  2BDX A;  3IVE A;  1JK7 A;  2R17 A;  3DSC A;  1T70 A;  3T1I A;  2O8G A;  2IAE C;  1S95 A;  3C5W C;  1QHW A;  3QFM A;  3AUZ A;  1WAO 1;  3P71 C;  4ORC A;  4MP0 A;  4FBQ A;  3ICF A;  4FBK A;  3LL8 A;  5F3W A;  3N5U A;  3RL3 A;  1U32 A;  1OIE A;  2NYL C;  4LAC C;  3PSN A;  1II7 A;  4ZX2 A;  1IT6 A;  1MF8 A;  1W24 A;  4WWL A;  4YKE A;  4FBW A;  5JPE A;  3IVD A;  2ZO9 B;  4I5N C;  2BQ8 X;  2YEQ A;  3THN A;  2QFP A;  2QJC A;  5JJT A;  1G5B A;  3RQZ A;  1S8E A;  2WDE A;  4NZV A;  4DT2 A;  3AV0 A;  4H2F A;  1UTE A;  2ZBM A;  4I5L C;  4O43 A;  2Z06 A;  2WDC A;  2JOG A;  2DFJ A;  4JA9 A;  5GTU A;  4MOV A;  3KBP A;  3QFO A;  3E0J A;  1OI8 A;  3JYF A;  4F0Z A;  3H68 A;  1S3N A;  3D03 A; 
#chains in the Genus database with same CATH homology
 3K7W C;  4V0X A;  2USH A;  4O4K A;  4LU9 A;  3K7V C;  3RL5 A;  3H62 B;  3DW8 C;  2NYM C;  2WDF A;  2QFR A;  3DSD A;  4Q7F A;  3EGG A;  3IB7 A;  3H66 A;  4UT3 B;  1S70 A;  4M0V A;  1HP1 A;  2BCD A;  2A22 A;  1V73 A;  1AUI A;  4H1Y P;  2Z1A A;  3GVE A;  4O5G A;  3CK2 A;  1KBP A;  4MOY A;  3H67 A;  2HYO A;  1QFC A;  1FJM A;  1NNW A;  3H64 A;  2O8A A;  2Q8U A;  4V0W A;  3C9F A;  4HD0 A;  4B2O A;  5C1V A;  5B8I A;  4J6O A;  3H61 A;  2KKN A;  2NPP C;  4KKZ A;  4TUG A;  4TUI A;  1M63 A;  2P6B A;  2YVT A;  4UWQ A;  1XZW A;  1SU1 A;  5J28 A;  4O24 A;  5JPF A;  2ZOA A;  4JA7 A;  3H69 A;  4H1S A;  1OID A;  5DNY A;  5HPE A;  3ZTV A;  2GJU A;  3FLO A;  5INB A;  4V0V A;  4G9J A;  3RL4 A;  4H2B A;  2IE3 C;  3ZU0 A;  1TCO A;  4FCX A;  3QFN A;  5IOH A;  2XMO A;  1USH A;  2Z72 A;  1HO5 A;  3E7B A;  3H60 A;  4DSY A;  4DHL A;  2AHD A;  4OR9 A;  4IL1 A;  4IYP C;  3V4Y A;  1Z2W A;  1S3M A;  4UT2 A;  2IE4 C;  3HVQ A;  2DXN A;  1WAR A;  4UT3 A;  3EGH A;  1UF3 A;  3QFK A;  3IB8 A;  2HY1 A;  3FGA C;  3E7A A;  1S3L A;  3TGH A;  1XM7 A;  1HPU A;  4H2I A;  1T71 A;  2CV9 A;  4H2G A;  4XPN A;  4KBP A;  4ZVZ A;  3PSO A;  3THO B;  3H63 A;  1Z2X A;  4ORA A;  5EQV A;  2WDD A;  2DXL A;  4ORB A;  4LTY A;  2NXF A;  2HYP A;  3QG5 C;  2BDX A;  3IVE A;  1JK7 A;  2R17 A;  3DSC A;  1T70 A;  3T1I A;  2O8G A;  2IAE C;  1S95 A;  3C5W C;  1QHW A;  3QFM A;  3AUZ A;  1WAO 1;  3P71 C;  4ORC A;  4MP0 A;  4FBQ A;  3ICF A;  4FBK A;  3LL8 A;  5F3W A;  3N5U A;  3RL3 A;  1U32 A;  1OIE A;  2NYL C;  4LAC C;  3PSN A;  1II7 A;  4ZX2 A;  1IT6 A;  1MF8 A;  1W24 A;  4WWL A;  4YKE A;  4FBW A;  5JPE A;  3IVD A;  2ZO9 B;  4I5N C;  2BQ8 X;  2YEQ A;  3THN A;  2QFP A;  2QJC A;  5JJT A;  1G5B A;  3RQZ A;  1S8E A;  2WDE A;  4NZV A;  4DT2 A;  3AV0 A;  4H2F A;  1UTE A;  2ZBM A;  4I5L C;  4O43 A;  2Z06 A;  2WDC A;  2JOG A;  2DFJ A;  4JA9 A;  5GTU A;  4MOV A;  3KBP A;  3QFO A;  3E0J A;  1OI8 A;  3JYF A;  4F0Z A;  3H68 A;  1S3N A;  3D03 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...