2Z72A

New structure of cold-active protein tyrosine phosphatase at 1.1 angstrom
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
338
structure length
338
Chain Sequence
ATEFDGPYVITPISGQSTAYWICDNRLKTTSIEKLQVNRPEHCGDLPETKLSSEIKQIMPDTYLGIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVNEVLWFMYQLDQQARDAGGMVHLLMGNHEQMVLGGDLRYVHQRYDIATTLINRPYNKLYSADTEIGQWLRSKNTIIKINDVLYMHGGISSEWISRELTLDKANALYRANVDASKKSLKADDLLNFLFFGNGPTWYRGYFSETFTEAELDTILQHFNVNHIVVGHTSQERVLGLFHNKVIAVDSSIKVGKSGELLLLENNRLIRGLYDGTRETLQENSLNQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Shewanella sp.
publication title The role of group bulkiness in the catalytic activity of psychrophile cold-active protein tyrosine phosphatase
pubmed doi rcsb
molecule keywords Protein-tyrosine-phosphatase
total genus 122
structure length 338
sequence length 338
ec nomenclature ec 3.1.3.48: Protein-tyrosine-phosphatase.
pdb deposition date 2007-08-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00149 Metallophos Calcineurin-like phosphoesterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.21.10 Alpha Beta 4-Layer Sandwich Purple Acid Phosphatase; chain A, domain 2 Purple Acid Phosphatase; chain A, domain 2 2z72A00
3EGGA 4YKEA 1S3MA 3P71C 4I5LC 3FGAC 3H61A 4FBWA 1XM7A 1II7A 4J6OA 2IE4C 3DW8C 4UT3A 2WDFA 3AV0A 4G9JA 2Z72A 1Z2XA 4H2GA 1S3LA 2P6BA 4ZX2A 2CV9A 4TUGA 4O5GA 2O8AA 4UT3B 2BDXA 3K7VC 1T70A 3H64A 2IAEC 3H69A 5EQVA 2A22A 3H63A 1HO5A 3THNA 4KKZA 1AUIA 2BQ8X 4O43A 3IB8A 4V0WA 3ZTVA 4DHLA 1KBPA 5JPEA 1HPUA 3GVEA 3T1IA 4F0ZA 4TUIA 5J28A 3TGHA 4LTYA 3EGHA 4WWLA 4JA9A 3RQZA 1Z2WA 4H2BA 4IYPC 1OIEA 4MOYA 5JPFA 2ZBMA 4H2FA 2O8GA 2QJCA 3QFKA 2HY1A 2QFRA 1JK7A 1SU1A 2YVTA 2WDEA 5GTUA 4M0VA 2NXFA 1S8EA 3PSOA 4UT2A 2WDCA 4ORAA 1U32A 3IB7A 5JJTA 4LU9A 3ICFA 1WAO1 4ORBA 4NZVA 3H67A 2XMOA 3K7WC 3QFNA 1MF8A 3ZU0A 1S95A 4JA7A 2Z1AA 2DFJA 1OIDA 1S3NA 4B2OA 2IE3C 4H1YP 1WARA 4H1SA 3LL8A 3RL5A 3RL3A 1QFCA 2AHDA 3C5WC 3HVQA 1NNWA 4LACC 3IVDA 4MOVA 1G5BA 1FJMA 3H68A 3AUZA 1V73A 2GJUA 2JOGA 2NYMC 3PSNA 3QG5C 3H66A 2R17A 3E7AA 3V4YA 4DT2A 1M63A 2QFPA 4V0XA 4OR9A 3H62B 3DSDA 4ORCA 3E7BA 3QFMA 1IT6A 4UWQA 4V0VA 1UF3A 4IL1A 3C9FA 2HYPA 5C1VA 3CK2A 5HPEA 4Q7FA 3IVEA 2USHA 2WDDA 2Z06A 5F3WA 1TCOA 4MP0A 5B8IA 2BCDA 4KBPA 2KKNA 2HYOA 4O24A 5DNYA 4HD0A 4FBQA 3N5UA 4I5NC 1USHA 3JYFA 5INBA 3H60A 1S70A 3KBPA 4FBKA 1T71A 1HP1A 1W24A 1OI8A 2NPPC 4O4KA 4XPNA 5IOHA 2NYLC 1UTEA 3QFOA 4FCXA 3RL4A 3THOB 4H2IA 3DSCA 1XZWA 1QHWA 4ZVZA 4DSYA 2Q8UA
chains in the Genus database with same CATH superfamily
3EGGA 4YKEA 2DXLA 1S3MA 3P71C 4I5LC 3FGAC 3H61A 4FBWA 1XM7A 1II7A 4J6OA 2IE4C 3DW8C 4UT3A 2WDFA 3AV0A 4G9JA 2Z72A 1Z2XA 4H2GA 1S3LA 2P6BA 4ZX2A 2CV9A 4TUGA 4O5GA 2O8AA 2ZO9B 4UT3B 2BDXA 3K7VC 1T70A 3H64A 2IAEC 3H69A 5EQVA 2A22A 3H63A 1HO5A 3THNA 4KKZA 1AUIA 2BQ8X 4O43A 3IB8A 4V0WA 3ZTVA 2YEQA 4DHLA 1KBPA 5JPEA 1HPUA 3GVEA 3T1IA 4F0ZA 4TUIA 5J28A 3TGHA 4LTYA 3EGHA 4WWLA 4JA9A 3RQZA 1Z2WA 4H2BA 4IYPC 1OIEA 4MOYA 5JPFA 2ZBMA 4H2FA 2O8GA 2QJCA 3QFKA 2HY1A 2QFRA 2ZOAA 1JK7A 1SU1A 2YVTA 2WDEA 5GTUA 4M0VA 2NXFA 1S8EA 3PSOA 4UT2A 2WDCA 4ORAA 1U32A 3IB7A 5JJTA 4LU9A 3ICFA 1WAO1 4ORBA 4NZVA 3H67A 2XMOA 3K7WC 3QFNA 1MF8A 3ZU0A 1S95A 4JA7A 2Z1AA 2DFJA 1OIDA 1S3NA 4B2OA 2IE3C 4H1YP 1WARA 4H1SA 3LL8A 3RL5A 3RL3A 1QFCA 2AHDA 3C5WC 3HVQA 1NNWA 4LACC 3IVDA 4MOVA 1G5BA 1FJMA 3H68A 3AUZA 3FLOA 1V73A 2GJUA 2JOGA 2NYMC 3PSNA 3QG5C 3H66A 2R17A 3E7AA 3V4YA 3E0JA 4DT2A 1M63A 2QFPA 4V0XA 4OR9A 3H62B 3DSDA 4ORCA 3E7BA 3QFMA 1IT6A 4UWQA 4V0VA 1UF3A 4IL1A 3C9FA 2HYPA 5C1VA 3CK2A 5HPEA 4Q7FA 3IVEA 2USHA 2WDDA 2Z06A 5F3WA 1TCOA 4MP0A 2DXNA 5B8IA 2BCDA 4KBPA 2KKNA 2HYOA 4O24A 5DNYA 4HD0A 4FBQA 3N5UA 4I5NC 1USHA 3JYFA 3D03A 5INBA 3H60A 1S70A 3KBPA 4FBKA 1T71A 1HP1A 1W24A 1OI8A 2NPPC 4O4KA 4XPNA 5IOHA 2NYLC 1UTEA 3QFOA 4FCXA 3RL4A 3THOB 4H2IA 3DSCA 1XZWA 1QHWA 4ZVZA 4DSYA 2Q8UA
chains in the Genus database with same CATH topology
3EGGA 4YKEA 2DXLA 1S3MA 3P71C 4I5LC 3FGAC 3H61A 4FBWA 1XM7A 1II7A 4J6OA 2IE4C 3DW8C 4UT3A 2WDFA 3AV0A 4G9JA 2Z72A 1Z2XA 4H2GA 1S3LA 2P6BA 4ZX2A 2CV9A 4TUGA 4O5GA 2O8AA 2ZO9B 4UT3B 2BDXA 3K7VC 1T70A 3H64A 2IAEC 3H69A 5EQVA 2A22A 3H63A 1HO5A 3THNA 4KKZA 1AUIA 2BQ8X 4O43A 3IB8A 4V0WA 3ZTVA 2YEQA 4DHLA 1KBPA 5JPEA 1HPUA 3GVEA 3T1IA 4F0ZA 4TUIA 5J28A 3TGHA 4LTYA 3EGHA 4WWLA 4JA9A 3RQZA 1Z2WA 4H2BA 4IYPC 1OIEA 4MOYA 5JPFA 2ZBMA 4H2FA 2O8GA 2QJCA 3QFKA 2HY1A 2QFRA 2ZOAA 1JK7A 1SU1A 2YVTA 2WDEA 5GTUA 4M0VA 2NXFA 1S8EA 3PSOA 4UT2A 2WDCA 4ORAA 1U32A 3IB7A 5JJTA 4LU9A 3ICFA 1WAO1 4ORBA 4NZVA 3H67A 2XMOA 3K7WC 3QFNA 1MF8A 3ZU0A 1S95A 4JA7A 2Z1AA 2DFJA 1OIDA 1S3NA 4B2OA 2IE3C 4H1YP 1WARA 4H1SA 3LL8A 3RL5A 3RL3A 1QFCA 2AHDA 3C5WC 3HVQA 1NNWA 4LACC 3IVDA 4MOVA 1G5BA 1FJMA 3H68A 3AUZA 3FLOA 1V73A 2GJUA 2JOGA 2NYMC 3PSNA 3QG5C 3H66A 2R17A 3E7AA 3V4YA 3E0JA 4DT2A 1M63A 2QFPA 4V0XA 4OR9A 3H62B 3DSDA 4ORCA 3E7BA 3QFMA 1IT6A 4UWQA 4V0VA 1UF3A 4IL1A 3C9FA 2HYPA 5C1VA 3CK2A 5HPEA 4Q7FA 3IVEA 2USHA 2WDDA 2Z06A 5F3WA 1TCOA 4MP0A 2DXNA 5B8IA 2BCDA 4KBPA 2KKNA 2HYOA 4O24A 5DNYA 4HD0A 4FBQA 3N5UA 4I5NC 1USHA 3JYFA 3D03A 5INBA 3H60A 1S70A 3KBPA 4FBKA 1T71A 1HP1A 1W24A 1OI8A 2NPPC 4O4KA 4XPNA 5IOHA 2NYLC 1UTEA 3QFOA 4FCXA 3RL4A 3THOB 4H2IA 3DSCA 1XZWA 1QHWA 4ZVZA 4DSYA 2Q8UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EGG A;  4YKE A;  1S3M A;  3P71 C;  4I5L C;  3FGA C;  3H61 A;  4FBW A;  1XM7 A;  1II7 A;  4J6O A;  2IE4 C;  3DW8 C;  4UT3 A;  2WDF A;  3AV0 A;  4G9J A;  2Z72 A;  1Z2X A;  4H2G A;  1S3L A;  2P6B A;  4ZX2 A;  2CV9 A;  4TUG A;  4O5G A;  2O8A A;  4UT3 B;  2BDX A;  3K7V C;  1T70 A;  3H64 A;  2IAE C;  3H69 A;  5EQV A;  2A22 A;  3H63 A;  1HO5 A;  3THN A;  4KKZ A;  1AUI A;  2BQ8 X;  4O43 A;  3IB8 A;  4V0W A;  3ZTV A;  4DHL A;  1KBP A;  5JPE A;  1HPU A;  3GVE A;  3T1I A;  4F0Z A;  4TUI A;  5J28 A;  3TGH A;  4LTY A;  3EGH A;  4WWL A;  4JA9 A;  3RQZ A;  1Z2W A;  4H2B A;  4IYP C;  1OIE A;  4MOY A;  5JPF A;  2ZBM A;  4H2F A;  2O8G A;  2QJC A;  3QFK A;  2HY1 A;  2QFR A;  1JK7 A;  1SU1 A;  2YVT A;  2WDE A;  5GTU A;  4M0V A;  2NXF A;  1S8E A;  3PSO A;  4UT2 A;  2WDC A;  4ORA A;  1U32 A;  3IB7 A;  5JJT A;  4LU9 A;  3ICF A;  1WAO 1;  4ORB A;  4NZV A;  3H67 A;  2XMO A;  3K7W C;  3QFN A;  1MF8 A;  3ZU0 A;  1S95 A;  4JA7 A;  2Z1A A;  2DFJ A;  1OID A;  1S3N A;  4B2O A;  2IE3 C;  4H1Y P;  1WAR A;  4H1S A;  3LL8 A;  3RL5 A;  3RL3 A;  1QFC A;  2AHD A;  3C5W C;  3HVQ A;  1NNW A;  4LAC C;  3IVD A;  4MOV A;  1G5B A;  1FJM A;  3H68 A;  3AUZ A;  1V73 A;  2GJU A;  2JOG A;  2NYM C;  3PSN A;  3QG5 C;  3H66 A;  2R17 A;  3E7A A;  3V4Y A;  4DT2 A;  1M63 A;  2QFP A;  4V0X A;  4OR9 A;  3H62 B;  3DSD A;  4ORC A;  3E7B A;  3QFM A;  1IT6 A;  4UWQ A;  4V0V A;  1UF3 A;  4IL1 A;  3C9F A;  2HYP A;  5C1V A;  3CK2 A;  5HPE A;  4Q7F A;  3IVE A;  2USH A;  2WDD A;  2Z06 A;  5F3W A;  1TCO A;  4MP0 A;  5B8I A;  2BCD A;  4KBP A;  2KKN A;  2HYO A;  4O24 A;  5DNY A;  4HD0 A;  4FBQ A;  3N5U A;  4I5N C;  1USH A;  3JYF A;  5INB A;  3H60 A;  1S70 A;  3KBP A;  4FBK A;  1T71 A;  1HP1 A;  1W24 A;  1OI8 A;  2NPP C;  4O4K A;  4XPN A;  5IOH A;  2NYL C;  1UTE A;  3QFO A;  4FCX A;  3RL4 A;  3THO B;  4H2I A;  3DSC A;  1XZW A;  1QHW A;  4ZVZ A;  4DSY A;  2Q8U A; 
#chains in the Genus database with same CATH topology
 3EGG A;  4YKE A;  2DXL A;  1S3M A;  3P71 C;  4I5L C;  3FGA C;  3H61 A;  4FBW A;  1XM7 A;  1II7 A;  4J6O A;  2IE4 C;  3DW8 C;  4UT3 A;  2WDF A;  3AV0 A;  4G9J A;  2Z72 A;  1Z2X A;  4H2G A;  1S3L A;  2P6B A;  4ZX2 A;  2CV9 A;  4TUG A;  4O5G A;  2O8A A;  2ZO9 B;  4UT3 B;  2BDX A;  3K7V C;  1T70 A;  3H64 A;  2IAE C;  3H69 A;  5EQV A;  2A22 A;  3H63 A;  1HO5 A;  3THN A;  4KKZ A;  1AUI A;  2BQ8 X;  4O43 A;  3IB8 A;  4V0W A;  3ZTV A;  2YEQ A;  4DHL A;  1KBP A;  5JPE A;  1HPU A;  3GVE A;  3T1I A;  4F0Z A;  4TUI A;  5J28 A;  3TGH A;  4LTY A;  3EGH A;  4WWL A;  4JA9 A;  3RQZ A;  1Z2W A;  4H2B A;  4IYP C;  1OIE A;  4MOY A;  5JPF A;  2ZBM A;  4H2F A;  2O8G A;  2QJC A;  3QFK A;  2HY1 A;  2QFR A;  2ZOA A;  1JK7 A;  1SU1 A;  2YVT A;  2WDE A;  5GTU A;  4M0V A;  2NXF A;  1S8E A;  3PSO A;  4UT2 A;  2WDC A;  4ORA A;  1U32 A;  3IB7 A;  5JJT A;  4LU9 A;  3ICF A;  1WAO 1;  4ORB A;  4NZV A;  3H67 A;  2XMO A;  3K7W C;  3QFN A;  1MF8 A;  3ZU0 A;  1S95 A;  4JA7 A;  2Z1A A;  2DFJ A;  1OID A;  1S3N A;  4B2O A;  2IE3 C;  4H1Y P;  1WAR A;  4H1S A;  3LL8 A;  3RL5 A;  3RL3 A;  1QFC A;  2AHD A;  3C5W C;  3HVQ A;  1NNW A;  4LAC C;  3IVD A;  4MOV A;  1G5B A;  1FJM A;  3H68 A;  3AUZ A;  3FLO A;  1V73 A;  2GJU A;  2JOG A;  2NYM C;  3PSN A;  3QG5 C;  3H66 A;  2R17 A;  3E7A A;  3V4Y A;  3E0J A;  4DT2 A;  1M63 A;  2QFP A;  4V0X A;  4OR9 A;  3H62 B;  3DSD A;  4ORC A;  3E7B A;  3QFM A;  1IT6 A;  4UWQ A;  4V0V A;  1UF3 A;  4IL1 A;  3C9F A;  2HYP A;  5C1V A;  3CK2 A;  5HPE A;  4Q7F A;  3IVE A;  2USH A;  2WDD A;  2Z06 A;  5F3W A;  1TCO A;  4MP0 A;  2DXN A;  5B8I A;  2BCD A;  4KBP A;  2KKN A;  2HYO A;  4O24 A;  5DNY A;  4HD0 A;  4FBQ A;  3N5U A;  4I5N C;  1USH A;  3JYF A;  3D03 A;  5INB A;  3H60 A;  1S70 A;  3KBP A;  4FBK A;  1T71 A;  1HP1 A;  1W24 A;  1OI8 A;  2NPP C;  4O4K A;  4XPN A;  5IOH A;  2NYL C;  1UTE A;  3QFO A;  4FCX A;  3RL4 A;  3THO B;  4H2I A;  3DSC A;  1XZW A;  1QHW A;  4ZVZ A;  4DSY A;  2Q8U A; 
#chains in the Genus database with same CATH homology
 3EGG A;  4YKE A;  2DXL A;  1S3M A;  3P71 C;  4I5L C;  3FGA C;  3H61 A;  4FBW A;  1XM7 A;  1II7 A;  4J6O A;  2IE4 C;  3DW8 C;  4UT3 A;  2WDF A;  3AV0 A;  4G9J A;  2Z72 A;  1Z2X A;  4H2G A;  1S3L A;  2P6B A;  4ZX2 A;  2CV9 A;  4TUG A;  4O5G A;  2O8A A;  2ZO9 B;  4UT3 B;  2BDX A;  3K7V C;  1T70 A;  3H64 A;  2IAE C;  3H69 A;  5EQV A;  2A22 A;  3H63 A;  1HO5 A;  3THN A;  4KKZ A;  1AUI A;  2BQ8 X;  4O43 A;  3IB8 A;  4V0W A;  3ZTV A;  2YEQ A;  4DHL A;  1KBP A;  5JPE A;  1HPU A;  3GVE A;  3T1I A;  4F0Z A;  4TUI A;  5J28 A;  3TGH A;  4LTY A;  3EGH A;  4WWL A;  4JA9 A;  3RQZ A;  1Z2W A;  4H2B A;  4IYP C;  1OIE A;  4MOY A;  5JPF A;  2ZBM A;  4H2F A;  2O8G A;  2QJC A;  3QFK A;  2HY1 A;  2QFR A;  2ZOA A;  1JK7 A;  1SU1 A;  2YVT A;  2WDE A;  5GTU A;  4M0V A;  2NXF A;  1S8E A;  3PSO A;  4UT2 A;  2WDC A;  4ORA A;  1U32 A;  3IB7 A;  5JJT A;  4LU9 A;  3ICF A;  1WAO 1;  4ORB A;  4NZV A;  3H67 A;  2XMO A;  3K7W C;  3QFN A;  1MF8 A;  3ZU0 A;  1S95 A;  4JA7 A;  2Z1A A;  2DFJ A;  1OID A;  1S3N A;  4B2O A;  2IE3 C;  4H1Y P;  1WAR A;  4H1S A;  3LL8 A;  3RL5 A;  3RL3 A;  1QFC A;  2AHD A;  3C5W C;  3HVQ A;  1NNW A;  4LAC C;  3IVD A;  4MOV A;  1G5B A;  1FJM A;  3H68 A;  3AUZ A;  3FLO A;  1V73 A;  2GJU A;  2JOG A;  2NYM C;  3PSN A;  3QG5 C;  3H66 A;  2R17 A;  3E7A A;  3V4Y A;  3E0J A;  4DT2 A;  1M63 A;  2QFP A;  4V0X A;  4OR9 A;  3H62 B;  3DSD A;  4ORC A;  3E7B A;  3QFM A;  1IT6 A;  4UWQ A;  4V0V A;  1UF3 A;  4IL1 A;  3C9F A;  2HYP A;  5C1V A;  3CK2 A;  5HPE A;  4Q7F A;  3IVE A;  2USH A;  2WDD A;  2Z06 A;  5F3W A;  1TCO A;  4MP0 A;  2DXN A;  5B8I A;  2BCD A;  4KBP A;  2KKN A;  2HYO A;  4O24 A;  5DNY A;  4HD0 A;  4FBQ A;  3N5U A;  4I5N C;  1USH A;  3JYF A;  3D03 A;  5INB A;  3H60 A;  1S70 A;  3KBP A;  4FBK A;  1T71 A;  1HP1 A;  1W24 A;  1OI8 A;  2NPP C;  4O4K A;  4XPN A;  5IOH A;  2NYL C;  1UTE A;  3QFO A;  4FCX A;  3RL4 A;  3THO B;  4H2I A;  3DSC A;  1XZW A;  1QHW A;  4ZVZ A;  4DSY A;  2Q8U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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