2ZMYA

Crystal structure of the met2-form of the copper-bound tyrosinase in complex with a caddie protein from streptomyces castaneoglobisporus obtained by soaking in cupric sulfate solution for 80 hours
Total Genus 102
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
102
sequence length
277
structure length
277
Chain Sequence
TVRKNQATLTADEKRRFVAAVLELKRSGRYDEFVRTHNEFIMSDTDSGERTGHRSPSFLPWHRRFLLDFEQALQSVDSSVTLPYWDWSADRTVRASLWAPDFLGGTGRSTDGRVMDGPFAASTGNWPINVRVDSRTYLRRSLGGSVAELPTRAEVESVLAISAYDLPPYNSASEGFRNHLEGWRGVNLHNRVHVWVGGQMATGVSPNDPVFWLHHAYVDKLWAEWQRRHPDSAYVPTGGTPDVVDLNETMKPWNTVRPADLLDHTAYYTFDALEHHH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase/metal transport
molecule keywords Tyrosinase
publication title X-Ray Snapshots of a Hydroxylation Mechanism of Tyrosinase
rcsb
source organism Streptomyces castaneoglobisporus
total genus 102
structure length 277
sequence length 277
ec nomenclature ec 1.14.18.1: Tyrosinase.
pdb deposition date 2008-04-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00264 Tyrosinase Common central domain of tyrosinase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1280.10 Mainly Alpha Orthogonal Bundle di-copper center containing domain from catechol oxidase Di-copper center containing domain from catechol oxidase 2zmyA00
4P6SA 4P6RA 3AWWA 3QJOA 4OUAB 5I38A 4HD7A 4J3RA 4J6VA 2ZWFA 4J6UA 1LLAA 3AWSA 1WX2A 2AHLA 2ZWEA 4D87A 1WXCA 3AWZA 1LL1A 3AWVA 2ZWGA 2ZMXA 3AX0A 2Y9WA 3WJMA 1NOLA 2AHKA 4YZWA 1HCYA 3AWXA 3W6WA 2P3XA 2Y9XA 3AWYA 3NQ1A 3WJMB 1BT1A 1LNLA 3AWUA 4Z10A 4L37A 1HC1A 5I3BA 1BT2A 3NPYA 3NM8A 4P6TA 3NTMA 5CE9A 3GWJA 1OXYA 3W6QA 3HHSA 4J6TA 1WX5A 4J3QA 4L37B 1WX4A 3AWTA 1BUGA 4Z0YA 1JS8A 1BT3A 3NQ0A 4J3PA 4OUAA 3NQ5A 4Z0ZA 3WKYA 4HD6A 2ZMYA 5I3AA 3HHSB 2ZMZA 4HD4A 2ZWDA
chains in the Genus database with same CATH superfamily
4P6SA 4P6RA 3AWWA 3QJOA 4OUAB 5I38A 4HD7A 4J3RA 4J6VA 2ZWFA 4J6UA 1LLAA 3AWSA 1WX2A 2AHLA 2ZWEA 4D87A 1WXCA 3AWZA 1LL1A 3AWVA 2ZWGA 2ZMXA 3AX0A 2Y9WA 3WJMA 1NOLA 2AHKA 4YZWA 1HCYA 3AWXA 3W6WA 2P3XA 2Y9XA 3AWYA 3NQ1A 3WJMB 1BT1A 1LNLA 3AWUA 4Z10A 4L37A 1HC1A 5I3BA 1BT2A 3NPYA 3NM8A 4P6TA 3NTMA 5CE9A 3GWJA 1OXYA 3W6QA 3HHSA 4J6TA 1WX5A 4J3QA 4L37B 1WX4A 3AWTA 1BUGA 4Z0YA 1JS8A 1BT3A 3NQ0A 4J3PA 4OUAA 3NQ5A 4Z0ZA 3WKYA 4HD6A 2ZMYA 5I3AA 3HHSB 2ZMZA 4HD4A 2ZWDA
chains in the Genus database with same CATH topology
4P6SA 4P6RA 3AWWA 3QJOA 4OUAB 5I38A 4HD7A 4J3RA 4J6VA 2ZWFA 4J6UA 1LLAA 3AWSA 1WX2A 2AHLA 2ZWEA 4D87A 1WXCA 3AWZA 1LL1A 3AWVA 2ZWGA 2ZMXA 3AX0A 2Y9WA 3WJMA 1NOLA 2AHKA 4YZWA 1HCYA 3AWXA 3W6WA 2P3XA 2Y9XA 3AWYA 3NQ1A 3WJMB 1BT1A 1LNLA 3AWUA 4Z10A 4L37A 1HC1A 5I3BA 1BT2A 3NPYA 3NM8A 4P6TA 3NTMA 5CE9A 3GWJA 1OXYA 3W6QA 3HHSA 4J6TA 1WX5A 4J3QA 4L37B 1WX4A 3AWTA 1BUGA 4Z0YA 1JS8A 1BT3A 3NQ0A 4J3PA 4OUAA 3NQ5A 4Z0ZA 3WKYA 4HD6A 2ZMYA 5I3AA 3HHSB 2ZMZA 4HD4A 2ZWDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4P6S A;  4P6R A;  3AWW A;  3QJO A;  4OUA B;  5I38 A;  4HD7 A;  4J3R A;  4J6V A;  2ZWF A;  4J6U A;  1LLA A;  3AWS A;  1WX2 A;  2AHL A;  2ZWE A;  4D87 A;  1WXC A;  3AWZ A;  1LL1 A;  3AWV A;  2ZWG A;  2ZMX A;  3AX0 A;  2Y9W A;  3WJM A;  1NOL A;  2AHK A;  4YZW A;  1HCY A;  3AWX A;  3W6W A;  2P3X A;  2Y9X A;  3AWY A;  3NQ1 A;  3WJM B;  1BT1 A;  1LNL A;  3AWU A;  4Z10 A;  4L37 A;  1HC1 A;  5I3B A;  1BT2 A;  3NPY A;  3NM8 A;  4P6T A;  3NTM A;  5CE9 A;  3GWJ A;  1OXY A;  3W6Q A;  3HHS A;  4J6T A;  1WX5 A;  4J3Q A;  4L37 B;  1WX4 A;  3AWT A;  1BUG A;  4Z0Y A;  1JS8 A;  1BT3 A;  3NQ0 A;  4J3P A;  4OUA A;  3NQ5 A;  4Z0Z A;  3WKY A;  4HD6 A;  2ZMY A;  5I3A A;  3HHS B;  2ZMZ A;  4HD4 A;  2ZWD A; 
#chains in the Genus database with same CATH topology
 4P6S A;  4P6R A;  3AWW A;  3QJO A;  4OUA B;  5I38 A;  4HD7 A;  4J3R A;  4J6V A;  2ZWF A;  4J6U A;  1LLA A;  3AWS A;  1WX2 A;  2AHL A;  2ZWE A;  4D87 A;  1WXC A;  3AWZ A;  1LL1 A;  3AWV A;  2ZWG A;  2ZMX A;  3AX0 A;  2Y9W A;  3WJM A;  1NOL A;  2AHK A;  4YZW A;  1HCY A;  3AWX A;  3W6W A;  2P3X A;  2Y9X A;  3AWY A;  3NQ1 A;  3WJM B;  1BT1 A;  1LNL A;  3AWU A;  4Z10 A;  4L37 A;  1HC1 A;  5I3B A;  1BT2 A;  3NPY A;  3NM8 A;  4P6T A;  3NTM A;  5CE9 A;  3GWJ A;  1OXY A;  3W6Q A;  3HHS A;  4J6T A;  1WX5 A;  4J3Q A;  4L37 B;  1WX4 A;  3AWT A;  1BUG A;  4Z0Y A;  1JS8 A;  1BT3 A;  3NQ0 A;  4J3P A;  4OUA A;  3NQ5 A;  4Z0Z A;  3WKY A;  4HD6 A;  2ZMY A;  5I3A A;  3HHS B;  2ZMZ A;  4HD4 A;  2ZWD A; 
#chains in the Genus database with same CATH homology
 4P6S A;  4P6R A;  3AWW A;  3QJO A;  4OUA B;  5I38 A;  4HD7 A;  4J3R A;  4J6V A;  2ZWF A;  4J6U A;  1LLA A;  3AWS A;  1WX2 A;  2AHL A;  2ZWE A;  4D87 A;  1WXC A;  3AWZ A;  1LL1 A;  3AWV A;  2ZWG A;  2ZMX A;  3AX0 A;  2Y9W A;  3WJM A;  1NOL A;  2AHK A;  4YZW A;  1HCY A;  3AWX A;  3W6W A;  2P3X A;  2Y9X A;  3AWY A;  3NQ1 A;  3WJM B;  1BT1 A;  1LNL A;  3AWU A;  4Z10 A;  4L37 A;  1HC1 A;  5I3B A;  1BT2 A;  3NPY A;  3NM8 A;  4P6T A;  3NTM A;  5CE9 A;  3GWJ A;  1OXY A;  3W6Q A;  3HHS A;  4J6T A;  1WX5 A;  4J3Q A;  4L37 B;  1WX4 A;  3AWT A;  1BUG A;  4Z0Y A;  1JS8 A;  1BT3 A;  3NQ0 A;  4J3P A;  4OUA A;  3NQ5 A;  4Z0Z A;  3WKY A;  4HD6 A;  2ZMY A;  5I3A A;  3HHS B;  2ZMZ A;  4HD4 A;  2ZWD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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