2ZRRA

Crystal structure of an immunity protein that contributes to the self-protection of bacteriocin-producing enterococcus mundtii 15-1a
Total Genus 31
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
31
sequence length
83
structure length
83
Chain Sequence
GDDRRKKAEVIITELLDDLEIDLGNESLRKVLGSYLKKLKNEGTSVPLVLSRMNIEISNAIKKDGVSLNENQSKKLKELMSIS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Antimicrobial protein
molecule keywords Mundticin KS immunity protein
publication title Crystal structure and mutagenic analysis of a bacteriocin immunity protein, Mun-im
pubmed doi rcsb
source organism Enterococcus mundtii
total genus 31
structure length 83
sequence length 83
ec nomenclature
pdb deposition date 2008-08-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08951 EntA_Immun Enterocin A Immunity
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1440.140 Mainly Alpha Up-down Bundle de novo design (two linked rop proteins) de novo design (two linked rop proteins) 2zrrA00
2K19A 2IP6A 2ZRRA
chains in the Genus database with same CATH superfamily
2E8GA 2L1LB 4YZDA 2K19A 2A2DA 4PL4A 4HFVA 3L0IA 4OAVB 4HEA1 2QSBA 3Q8DA 2FEFA 3FNBA 4AS3A 2RIOA 4Q9VA 3DA4A 2JB1A 2F6MB 2FUG1 2JB2A 2HGKA 4JCVE 2BL8A 4YZCA 4Z7GA 5LNK1 2A2CA 2XTRA 4DWLA 5HGIA 2YFBA 3FBVA 2GSCA 4I1TA 1JQOA 3B55A 3LJ0A 1U5KA 3KP9A 2ETDA 2QGMA 2FU2A 2F66B 2KKMA 3IAM1 3LJ1A 4G76A 3DO9A 1TDPA 3IAS1 2RADA 4Z7HA 2ZW3A 3I9V1 2XTQA 4U6RA 3AJFA 3LJ2A 2IP6A 2CAZB 2YFAA 4O1OA 3SDJA 3VA9A 4NV5A 2JB3A 1YO7A 3FVVA 4GXTA 3UITA 2JAEA 3DA3A 1W3SA 4AS2A 2JBWA 1SJ8A 2XMXA 4PL5A 2BL7A 3F4MA 2V6EA 2MJFB 2P22B 4G75A 4OAUC 2V1CC 3JSBA 4YZ9A 4NV2A 2ZRRA 4PL3A 4O1PA 2RLDA 3P23A 2QZGA
chains in the Genus database with same CATH topology
2E8GA 2L1LB 4YZDA 2K19A 2A2DA 4PL4A 4HFVA 3L0IA 4OAVB 4HEA1 3Q8DA 4AS3A 2RIOA 4Q9VA 3DA4A 2JB1A 2F6MB 2FUG1 2JB2A 4JCVE 4YZCA 4Z7GA 5LNK1 2A2CA 2XTRA 4DWLA 5HGIA 2YFBA 3FBVA 4I1TA 3LJ0A 1U5KA 3KP9A 2F66B 2KKMA 3IAM1 3LJ1A 4G76A 3DO9A 3IAS1 4Z7HA 3I9V1 2XTQA 4U6RA 3AJFA 3LJ2A 2IP6A 2CAZB 2YFAA 4O1OA 3SDJA 3VA9A 4NV5A 2JB3A 1YO7A 4GXTA 3UITA 2JAEA 3DA3A 1W3SA 4AS2A 1SJ8A 2XMXA 4PL5A 3F4MA 2V6EA 2MJFB 2P22B 4G75A 4OAUC 2V1CC 3JSBA 4YZ9A 4NV2A 2ZRRA 4PL3A 4O1PA 3P23A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2K19 A;  2IP6 A;  2ZRR A; 
#chains in the Genus database with same CATH topology
 2E8G A;  2L1L B;  4YZD A;  2K19 A;  2A2D A;  4PL4 A;  4HFV A;  3L0I A;  4OAV B;  4HEA 1;  2QSB A;  3Q8D A;  2FEF A;  3FNB A;  4AS3 A;  2RIO A;  4Q9V A;  3DA4 A;  2JB1 A;  2F6M B;  2FUG 1;  2JB2 A;  2HGK A;  4JCV E;  2BL8 A;  4YZC A;  4Z7G A;  5LNK 1;  2A2C A;  2XTR A;  4DWL A;  5HGI A;  2YFB A;  3FBV A;  2GSC A;  4I1T A;  1JQO A;  3B55 A;  3LJ0 A;  1U5K A;  3KP9 A;  2ETD A;  2QGM A;  2FU2 A;  2F66 B;  2KKM A;  3IAM 1;  3LJ1 A;  4G76 A;  3DO9 A;  1TDP A;  3IAS 1;  2RAD A;  4Z7H A;  2ZW3 A;  3I9V 1;  2XTQ A;  4U6R A;  3AJF A;  3LJ2 A;  2IP6 A;  2CAZ B;  2YFA A;  4O1O A;  3SDJ A;  3VA9 A;  4NV5 A;  2JB3 A;  1YO7 A;  3FVV A;  4GXT A;  3UIT A;  2JAE A;  3DA3 A;  1W3S A;  4AS2 A;  2JBW A;  1SJ8 A;  2XMX A;  4PL5 A;  2BL7 A;  3F4M A;  2V6E A;  2MJF B;  2P22 B;  4G75 A;  4OAU C;  2V1C C;  3JSB A;  4YZ9 A;  4NV2 A;  2ZRR A;  4PL3 A;  4O1P A;  2RLD A;  3P23 A;  2QZG A; 
#chains in the Genus database with same CATH homology
 2E8G A;  2L1L B;  4YZD A;  2K19 A;  2A2D A;  4PL4 A;  4HFV A;  3L0I A;  4OAV B;  4HEA 1;  3Q8D A;  4AS3 A;  2RIO A;  4Q9V A;  3DA4 A;  2JB1 A;  2F6M B;  2FUG 1;  2JB2 A;  4JCV E;  4YZC A;  4Z7G A;  5LNK 1;  2A2C A;  2XTR A;  4DWL A;  5HGI A;  2YFB A;  3FBV A;  4I1T A;  3LJ0 A;  1U5K A;  3KP9 A;  2F66 B;  2KKM A;  3IAM 1;  3LJ1 A;  4G76 A;  3DO9 A;  3IAS 1;  4Z7H A;  3I9V 1;  2XTQ A;  4U6R A;  3AJF A;  3LJ2 A;  2IP6 A;  2CAZ B;  2YFA A;  4O1O A;  3SDJ A;  3VA9 A;  4NV5 A;  2JB3 A;  1YO7 A;  4GXT A;  3UIT A;  2JAE A;  3DA3 A;  1W3S A;  4AS2 A;  1SJ8 A;  2XMX A;  4PL5 A;  3F4M A;  2V6E A;  2MJF B;  2P22 B;  4G75 A;  4OAU C;  2V1C C;  3JSB A;  4YZ9 A;  4NV2 A;  2ZRR A;  4PL3 A;  4O1P A;  3P23 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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