2ZVBA

Crystal structure of tt0207 from thermus thermophilus hb8
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
259
structure length
259
Chain Sequence
GELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTYVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERALSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREAEAGMLTTVVIGNRQSRFYEGTFLTPRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of TT0207 from Thermus thermophilus HB8
rcsb
molecule tags Transferase
molecule keywords Precorrin-3 C17-methyltransferase
total genus 79
structure length 259
sequence length 259
ec nomenclature
pdb deposition date 2008-11-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2zvbA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2zvbA01
2EJKA 2E17A 2BB3A 2E4NA 1CBFA 2ELDA 2DXXA 2EHLA 3HH1A 2EGSA 2PCKA 2P6KA 2YBQA 1VCEA 2DV7A 1WNGA 2EGLA 2ZVBA 2P9DA 3NDCA 1V9AA 2P5CA 2E8QA 1PJTA 2PCGA 2EJZA 2EMUA 2OWGA 2PCHA 1S4DA 2OWFA 2DSGA 2DXWA 2QBUA 2HUXA 2P2XA 3FFYA 2E16A 2P6IA 2E0NA 2E08A 2NPNA 1VHVA 2P6LA 2EH2A 2EN5A 3ND1A 2P5FA 2ZVCA 2E15A 2PCIA 2E8HA 5HW4A 1WDEA 2E07A 2EK4A 4E16A 2HUQA 3NUTA 2EH5A 3FQ6A 2EKAA 2OWVA 2OWKA 2EL1A 3KWPA 2PCMA 2DEKA 2DV4A 2EMRA 2PB6A 2EHCA 2P6DA 2OWUA 2EGBA 2PB4A 3NEIA 2DV3A 2EK3A 2PB5A 1VA0A 2DSHA 2DV5A 2ED3A 2DXVA 2EL0A 2E8RA 2HUTA 2E7RA 1PJQA 2E0KA 2EK7A 1VE2A 1WYZA 2HR8A 2EL3A 2EJJA 3I4TA 2YBOA 2E8SA 2EH4A 2DSIA 1PJSA 2HUVA 2ELEA 2PCAA 2Z6RA 2EEQA 2ENIA 2CBFA 2EL2A 2E4RA 2ED5A 2EK2A
chains in the Genus database with same CATH superfamily
2EJKA 2E17A 2BB3A 2E4NA 1CBFA 2ELDA 2DXXA 2EHLA 3HH1A 2EGSA 4MV5A 2PCKA 2P6KA 2YBQA 1VCEA 3T0GA 2DV7A 3SZUA 1WNGA 2EGLA 2ZVBA 4N7BA 2P9DA 3NDCA 3UWMA 1V9AA 2P5CA 2E8QA 3UTDA 1PJTA 4MV0A 2PCGA 2EJZA 2EMUA 2OWGA 2PCHA 1S4DA 2OWFA 2DSGA 3UTCA 2DXWA 2QBUA 2HUXA 2P2XA 3FFYA 2E16A 4MUXA 2P6IA 2E0NA 2E08A 2NPNA 1VHVA 2P6LA 2EH2A 3UV3A 2EN5A 3ND1A 2P5FA 3KEMA 2ZVCA 2E15A 2PCIA 2E8HA 5HW4A 1WDEA 2E07A 2EK4A 3LMMA 4E16A 3T0FA 2HUQA 3NUTA 2EH5A 3FQ6A 2EKAA 3ZGLA 4H4EA 3SZLA 2OWVA 2OWKA 3SZOA 3URKA 2EL1A 3KWPA 4EB3A 2PCMA 2DEKA 2DV4A 2EMRA 2PB6A 2EHCA 2P6DA 4MUYA 2OWUA 2EGBA 2PB4A 3NEIA 4H4DA 2DV3A 2EK3A 3KELA 3KE9A 2PB5A 2KYYA 1VA0A 3DNFA 2DSHA 2DV5A 3TIXB 4H4CA 2ED3A 2DXVA 2EL0A 2E8RA 2HUTA 2E7RA 1PJQA 2E0KA 3F7TA 3ZGNA 2EK7A 1VE2A 1WYZA 2HR8A 2EL3A 2EJJA 3I4TA 2YBOA 2E8SA 2EH4A 2DSIA 1PJSA 2HUVA 2ELEA 2PCAA 2Z6RA 3UV6A 2EEQA 3UV7A 2ENIA 2CBFA 2EL2A 2E4RA 3KE8A 2ED5A 2EK2A 3KEFA
chains in the Genus database with same CATH topology
2EJKA 2E17A 2BB3A 2E4NA 1CBFA 2ELDA 2DXXA 2EHLA 3HH1A 2EGSA 4MV5A 2PCKA 2P6KA 2YBQA 1VCEA 3T0GA 2DV7A 3SZUA 1WNGA 2EGLA 2ZVBA 4N7BA 2P9DA 3NDCA 3UWMA 1V9AA 2P5CA 2E8QA 3UTDA 1PJTA 4MV0A 2PCGA 2EJZA 2EMUA 2OWGA 2PCHA 1S4DA 2OWFA 2DSGA 3UTCA 2DXWA 2QBUA 2HUXA 2P2XA 3FFYA 2E16A 4MUXA 2P6IA 2E0NA 2E08A 2NPNA 1VHVA 2P6LA 2EH2A 3UV3A 2EN5A 3ND1A 2P5FA 3KEMA 2ZVCA 2E15A 2PCIA 2E8HA 5HW4A 1WDEA 2E07A 2EK4A 3LMMA 4E16A 3T0FA 2HUQA 3NUTA 2EH5A 3FQ6A 2EKAA 3ZGLA 4H4EA 3SZLA 2OWVA 2OWKA 3SZOA 3URKA 2EL1A 3KWPA 4EB3A 2PCMA 2DEKA 2DV4A 2EMRA 2PB6A 2EHCA 2P6DA 4MUYA 2OWUA 2EGBA 2PB4A 3NEIA 4H4DA 2DV3A 2EK3A 3KELA 3KE9A 2PB5A 2KYYA 1VA0A 3DNFA 2DSHA 2DV5A 3TIXB 4H4CA 2ED3A 2DXVA 2EL0A 2E8RA 2HUTA 2E7RA 1PJQA 2E0KA 3F7TA 3ZGNA 2EK7A 1VE2A 1WYZA 2HR8A 2EL3A 2EJJA 3I4TA 2YBOA 2E8SA 2EH4A 2DSIA 1PJSA 2HUVA 2ELEA 2PCAA 2Z6RA 3UV6A 2EEQA 3UV7A 2ENIA 2CBFA 2EL2A 2E4RA 3KE8A 2ED5A 2EK2A 3KEFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EJK A;  2E17 A;  2BB3 A;  2E4N A;  1CBF A;  2ELD A;  2DXX A;  2EHL A;  3HH1 A;  2EGS A;  2PCK A;  2P6K A;  2YBQ A;  1VCE A;  2DV7 A;  1WNG A;  2EGL A;  2ZVB A;  2P9D A;  3NDC A;  1V9A A;  2P5C A;  2E8Q A;  1PJT A;  2PCG A;  2EJZ A;  2EMU A;  2OWG A;  2PCH A;  1S4D A;  2OWF A;  2DSG A;  2DXW A;  2QBU A;  2HUX A;  2P2X A;  3FFY A;  2E16 A;  2P6I A;  2E0N A;  2E08 A;  2NPN A;  1VHV A;  2P6L A;  2EH2 A;  2EN5 A;  3ND1 A;  2P5F A;  2ZVC A;  2E15 A;  2PCI A;  2E8H A;  5HW4 A;  1WDE A;  2E07 A;  2EK4 A;  4E16 A;  2HUQ A;  3NUT A;  2EH5 A;  3FQ6 A;  2EKA A;  2OWV A;  2OWK A;  2EL1 A;  3KWP A;  2PCM A;  2DEK A;  2DV4 A;  2EMR A;  2PB6 A;  2EHC A;  2P6D A;  2OWU A;  2EGB A;  2PB4 A;  3NEI A;  2DV3 A;  2EK3 A;  2PB5 A;  1VA0 A;  2DSH A;  2DV5 A;  2ED3 A;  2DXV A;  2EL0 A;  2E8R A;  2HUT A;  2E7R A;  1PJQ A;  2E0K A;  2EK7 A;  1VE2 A;  1WYZ A;  2HR8 A;  2EL3 A;  2EJJ A;  3I4T A;  2YBO A;  2E8S A;  2EH4 A;  2DSI A;  1PJS A;  2HUV A;  2ELE A;  2PCA A;  2Z6R A;  2EEQ A;  2ENI A;  2CBF A;  2EL2 A;  2E4R A;  2ED5 A;  2EK2 A; 
#chains in the Genus database with same CATH topology
 2EJK A;  2E17 A;  2BB3 A;  2E4N A;  1CBF A;  2ELD A;  2DXX A;  2EHL A;  3HH1 A;  2EGS A;  4MV5 A;  2PCK A;  2P6K A;  2YBQ A;  1VCE A;  3T0G A;  2DV7 A;  3SZU A;  1WNG A;  2EGL A;  2ZVB A;  4N7B A;  2P9D A;  3NDC A;  3UWM A;  1V9A A;  2P5C A;  2E8Q A;  3UTD A;  1PJT A;  4MV0 A;  2PCG A;  2EJZ A;  2EMU A;  2OWG A;  2PCH A;  1S4D A;  2OWF A;  2DSG A;  3UTC A;  2DXW A;  2QBU A;  2HUX A;  2P2X A;  3FFY A;  2E16 A;  4MUX A;  2P6I A;  2E0N A;  2E08 A;  2NPN A;  1VHV A;  2P6L A;  2EH2 A;  3UV3 A;  2EN5 A;  3ND1 A;  2P5F A;  3KEM A;  2ZVC A;  2E15 A;  2PCI A;  2E8H A;  5HW4 A;  1WDE A;  2E07 A;  2EK4 A;  3LMM A;  4E16 A;  3T0F A;  2HUQ A;  3NUT A;  2EH5 A;  3FQ6 A;  2EKA A;  3ZGL A;  4H4E A;  3SZL A;  2OWV A;  2OWK A;  3SZO A;  3URK A;  2EL1 A;  3KWP A;  4EB3 A;  2PCM A;  2DEK A;  2DV4 A;  2EMR A;  2PB6 A;  2EHC A;  2P6D A;  4MUY A;  2OWU A;  2EGB A;  2PB4 A;  3NEI A;  4H4D A;  2DV3 A;  2EK3 A;  3KEL A;  3KE9 A;  2PB5 A;  2KYY A;  1VA0 A;  3DNF A;  2DSH A;  2DV5 A;  3TIX B;  4H4C A;  2ED3 A;  2DXV A;  2EL0 A;  2E8R A;  2HUT A;  2E7R A;  1PJQ A;  2E0K A;  3F7T A;  3ZGN A;  2EK7 A;  1VE2 A;  1WYZ A;  2HR8 A;  2EL3 A;  2EJJ A;  3I4T A;  2YBO A;  2E8S A;  2EH4 A;  2DSI A;  1PJS A;  2HUV A;  2ELE A;  2PCA A;  2Z6R A;  3UV6 A;  2EEQ A;  3UV7 A;  2ENI A;  2CBF A;  2EL2 A;  2E4R A;  3KE8 A;  2ED5 A;  2EK2 A;  3KEF A; 
#chains in the Genus database with same CATH homology
 2EJK A;  2E17 A;  2BB3 A;  2E4N A;  1CBF A;  2ELD A;  2DXX A;  2EHL A;  3HH1 A;  2EGS A;  4MV5 A;  2PCK A;  2P6K A;  2YBQ A;  1VCE A;  3T0G A;  2DV7 A;  3SZU A;  1WNG A;  2EGL A;  2ZVB A;  4N7B A;  2P9D A;  3NDC A;  3UWM A;  1V9A A;  2P5C A;  2E8Q A;  3UTD A;  1PJT A;  4MV0 A;  2PCG A;  2EJZ A;  2EMU A;  2OWG A;  2PCH A;  1S4D A;  2OWF A;  2DSG A;  3UTC A;  2DXW A;  2QBU A;  2HUX A;  2P2X A;  3FFY A;  2E16 A;  4MUX A;  2P6I A;  2E0N A;  2E08 A;  2NPN A;  1VHV A;  2P6L A;  2EH2 A;  3UV3 A;  2EN5 A;  3ND1 A;  2P5F A;  3KEM A;  2ZVC A;  2E15 A;  2PCI A;  2E8H A;  5HW4 A;  1WDE A;  2E07 A;  2EK4 A;  3LMM A;  4E16 A;  3T0F A;  2HUQ A;  3NUT A;  2EH5 A;  3FQ6 A;  2EKA A;  3ZGL A;  4H4E A;  3SZL A;  2OWV A;  2OWK A;  3SZO A;  3URK A;  2EL1 A;  3KWP A;  4EB3 A;  2PCM A;  2DEK A;  2DV4 A;  2EMR A;  2PB6 A;  2EHC A;  2P6D A;  4MUY A;  2OWU A;  2EGB A;  2PB4 A;  3NEI A;  4H4D A;  2DV3 A;  2EK3 A;  3KEL A;  3KE9 A;  2PB5 A;  2KYY A;  1VA0 A;  3DNF A;  2DSH A;  2DV5 A;  3TIX B;  4H4C A;  2ED3 A;  2DXV A;  2EL0 A;  2E8R A;  2HUT A;  2E7R A;  1PJQ A;  2E0K A;  3F7T A;  3ZGN A;  2EK7 A;  1VE2 A;  1WYZ A;  2HR8 A;  2EL3 A;  2EJJ A;  3I4T A;  2YBO A;  2E8S A;  2EH4 A;  2DSI A;  1PJS A;  2HUV A;  2ELE A;  2PCA A;  2Z6R A;  3UV6 A;  2EEQ A;  3UV7 A;  2ENI A;  2CBF A;  2EL2 A;  2E4R A;  3KE8 A;  2ED5 A;  2EK2 A;  3KEF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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