2ZVCA

Form 2 structure (c2221) of tt0207 from thermus thermophilus hb8
Total Genus 80
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
80
sequence length
259
structure length
259
Chain Sequence
GELFLVGMGPGDLPGLTQRAREALEGAEVVIGYSTYVKLLEEMGLLAGKEVVRKGMTEELDRAEEALERALSGQRVALVSGGDPGIYGMAAPVLELMEERGLKRVDGGVGLPGRFAGEEGEVFLAVIPGVTAANAVASLLGSPLAHDTCLISLSDLLTPWPLIERRLHAAGQGDFVVVLYNPQSKRRDWQLRKSAEILLEYRPKETPAALVKSAYRKRQEVALTTLEGLREAEAGMLTTVVIGNRQSRFYEGTFLTPRG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Precorrin-3 C17-methyltransferase
publication title Form 2 structure (C2221) of TT0207 from Thermus thermophilus HB8
rcsb
total genus 80
structure length 259
sequence length 259
ec nomenclature
pdb deposition date 2008-11-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2zvcA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2zvcA01
1S4DA 2PB6A 2BB3A 2EEQA 1PJSA 2DV5A 2DV7A 2E4NA 2HUXA 2ENIA 2EHLA 2EJJA 2ED5A 2HUTA 2E8HA 3HH1A 2OWFA 3ND1A 2E8QA 1WNGA 2E0NA 1VE2A 2E8RA 2DSHA 2DV3A 3FFYA 1VA0A 2E16A 2P6DA 2EH4A 2P5FA 2DEKA 2ZVBA 2P6LA 2EMRA 2P5CA 2EGBA 2EJZA 2DXWA 2E17A 2OWKA 1VCEA 2HUVA 2EHCA 2EK3A 2PCMA 3FQ6A 3I4TA 2E8SA 2P9DA 2EJKA 2EL0A 2PB4A 2HUQA 2OWGA 2DXVA 2ZVCA 2EN5A 3NDCA 2EGSA 2P6IA 2E7RA 3KWPA 2OWUA 2OWVA 2HR8A 2E0KA 5HW4A 2E07A 2PCKA 2EKAA 2ELEA 3NUTA 2DSIA 2EK2A 2PCHA 2P2XA 1PJTA 1PJQA 2EK7A 2YBQA 2Z6RA 2E4RA 2PCAA 2ELDA 1WYZA 2DSGA 2EL3A 2PCGA 3NEIA 2EGLA 2PCIA 1VHVA 1V9AA 2CBFA 2YBOA 1CBFA 2QBUA 2EL1A 4E16A 1WDEA 2DV4A 2NPNA 2EH2A 2ED3A 2EK4A 2EMUA 2EH5A 2EL2A 2E08A 2DXXA 2E15A 2P6KA 2PB5A
chains in the Genus database with same CATH superfamily
1S4DA 2PB6A 2BB3A 2EEQA 1PJSA 2DV5A 2DV7A 2E4NA 2HUXA 2ENIA 2EHLA 2EJJA 2ED5A 2HUTA 3T0FA 3KE9A 3T0GA 2E8HA 3HH1A 2OWFA 3ND1A 2E8QA 1WNGA 2E0NA 3ZGLA 3UTCA 1VE2A 2E8RA 2DSHA 2DV3A 4EB3A 3FFYA 1VA0A 2E16A 4H4DA 2P6DA 2EH4A 2P5FA 2DEKA 2ZVBA 2P6LA 4H4EA 2EMRA 2P5CA 2EGBA 2EJZA 3UWMA 3KEFA 2DXWA 2E17A 3TIXB 3DNFA 4MV5A 2OWKA 1VCEA 2HUVA 2EHCA 2EK3A 2PCMA 3FQ6A 3I4TA 2E8SA 2P9DA 2EJKA 2EL0A 2PB4A 2HUQA 2OWGA 3ZGNA 3URKA 3KELA 2DXVA 2ZVCA 3UV3A 2EN5A 3NDCA 2EGSA 2P6IA 2E7RA 3KWPA 2OWUA 2OWVA 3SZLA 2HR8A 2E0KA 2KYYA 5HW4A 2E07A 2PCKA 2EKAA 3SZOA 2ELEA 3NUTA 2DSIA 4N7BA 2EK2A 2PCHA 3LMMA 2P2XA 1PJTA 1PJQA 2EK7A 2YBQA 3F7TA 2Z6RA 3SZUA 2E4RA 2PCAA 2ELDA 1WYZA 2DSGA 2EL3A 2PCGA 3NEIA 2EGLA 2PCIA 1VHVA 3KEMA 4MUYA 1V9AA 4H4CA 2CBFA 2YBOA 1CBFA 3UV7A 2QBUA 2EL1A 4E16A 1WDEA 2DV4A 2NPNA 2EH2A 2ED3A 2EK4A 3KE8A 2EMUA 3UV6A 2EH5A 2EL2A 2E08A 4MV0A 2DXXA 2E15A 3UTDA 2P6KA 4MUXA 2PB5A
chains in the Genus database with same CATH topology
1S4DA 2PB6A 2BB3A 2EEQA 1PJSA 2DV5A 2DV7A 2E4NA 2HUXA 2ENIA 2EHLA 2EJJA 2ED5A 2HUTA 3T0FA 3KE9A 3T0GA 2E8HA 3HH1A 2OWFA 3ND1A 2E8QA 1WNGA 2E0NA 3ZGLA 3UTCA 1VE2A 2E8RA 2DSHA 2DV3A 4EB3A 3FFYA 1VA0A 2E16A 4H4DA 2P6DA 2EH4A 2P5FA 2DEKA 2ZVBA 2P6LA 4H4EA 2EMRA 2P5CA 2EGBA 2EJZA 3UWMA 3KEFA 2DXWA 2E17A 3TIXB 3DNFA 4MV5A 2OWKA 1VCEA 2HUVA 2EHCA 2EK3A 2PCMA 3FQ6A 3I4TA 2E8SA 2P9DA 2EJKA 2EL0A 2PB4A 2HUQA 2OWGA 3ZGNA 3URKA 3KELA 2DXVA 2ZVCA 3UV3A 2EN5A 3NDCA 2EGSA 2P6IA 2E7RA 3KWPA 2OWUA 2OWVA 3SZLA 2HR8A 2E0KA 2KYYA 5HW4A 2E07A 2PCKA 2EKAA 3SZOA 2ELEA 3NUTA 2DSIA 4N7BA 2EK2A 2PCHA 3LMMA 2P2XA 1PJTA 1PJQA 2EK7A 2YBQA 3F7TA 2Z6RA 3SZUA 2E4RA 2PCAA 2ELDA 1WYZA 2DSGA 2EL3A 2PCGA 3NEIA 2EGLA 2PCIA 1VHVA 3KEMA 4MUYA 1V9AA 4H4CA 2CBFA 2YBOA 1CBFA 3UV7A 2QBUA 2EL1A 4E16A 1WDEA 2DV4A 2NPNA 2EH2A 2ED3A 2EK4A 3KE8A 2EMUA 3UV6A 2EH5A 2EL2A 2E08A 4MV0A 2DXXA 2E15A 3UTDA 2P6KA 4MUXA 2PB5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1S4D A;  2PB6 A;  2BB3 A;  2EEQ A;  1PJS A;  2DV5 A;  2DV7 A;  2E4N A;  2HUX A;  2ENI A;  2EHL A;  2EJJ A;  2ED5 A;  2HUT A;  2E8H A;  3HH1 A;  2OWF A;  3ND1 A;  2E8Q A;  1WNG A;  2E0N A;  1VE2 A;  2E8R A;  2DSH A;  2DV3 A;  3FFY A;  1VA0 A;  2E16 A;  2P6D A;  2EH4 A;  2P5F A;  2DEK A;  2ZVB A;  2P6L A;  2EMR A;  2P5C A;  2EGB A;  2EJZ A;  2DXW A;  2E17 A;  2OWK A;  1VCE A;  2HUV A;  2EHC A;  2EK3 A;  2PCM A;  3FQ6 A;  3I4T A;  2E8S A;  2P9D A;  2EJK A;  2EL0 A;  2PB4 A;  2HUQ A;  2OWG A;  2DXV A;  2ZVC A;  2EN5 A;  3NDC A;  2EGS A;  2P6I A;  2E7R A;  3KWP A;  2OWU A;  2OWV A;  2HR8 A;  2E0K A;  5HW4 A;  2E07 A;  2PCK A;  2EKA A;  2ELE A;  3NUT A;  2DSI A;  2EK2 A;  2PCH A;  2P2X A;  1PJT A;  1PJQ A;  2EK7 A;  2YBQ A;  2Z6R A;  2E4R A;  2PCA A;  2ELD A;  1WYZ A;  2DSG A;  2EL3 A;  2PCG A;  3NEI A;  2EGL A;  2PCI A;  1VHV A;  1V9A A;  2CBF A;  2YBO A;  1CBF A;  2QBU A;  2EL1 A;  4E16 A;  1WDE A;  2DV4 A;  2NPN A;  2EH2 A;  2ED3 A;  2EK4 A;  2EMU A;  2EH5 A;  2EL2 A;  2E08 A;  2DXX A;  2E15 A;  2P6K A;  2PB5 A; 
#chains in the Genus database with same CATH topology
 1S4D A;  2PB6 A;  2BB3 A;  2EEQ A;  1PJS A;  2DV5 A;  2DV7 A;  2E4N A;  2HUX A;  2ENI A;  2EHL A;  2EJJ A;  2ED5 A;  2HUT A;  3T0F A;  3KE9 A;  3T0G A;  2E8H A;  3HH1 A;  2OWF A;  3ND1 A;  2E8Q A;  1WNG A;  2E0N A;  3ZGL A;  3UTC A;  1VE2 A;  2E8R A;  2DSH A;  2DV3 A;  4EB3 A;  3FFY A;  1VA0 A;  2E16 A;  4H4D A;  2P6D A;  2EH4 A;  2P5F A;  2DEK A;  2ZVB A;  2P6L A;  4H4E A;  2EMR A;  2P5C A;  2EGB A;  2EJZ A;  3UWM A;  3KEF A;  2DXW A;  2E17 A;  3TIX B;  3DNF A;  4MV5 A;  2OWK A;  1VCE A;  2HUV A;  2EHC A;  2EK3 A;  2PCM A;  3FQ6 A;  3I4T A;  2E8S A;  2P9D A;  2EJK A;  2EL0 A;  2PB4 A;  2HUQ A;  2OWG A;  3ZGN A;  3URK A;  3KEL A;  2DXV A;  2ZVC A;  3UV3 A;  2EN5 A;  3NDC A;  2EGS A;  2P6I A;  2E7R A;  3KWP A;  2OWU A;  2OWV A;  3SZL A;  2HR8 A;  2E0K A;  2KYY A;  5HW4 A;  2E07 A;  2PCK A;  2EKA A;  3SZO A;  2ELE A;  3NUT A;  2DSI A;  4N7B A;  2EK2 A;  2PCH A;  3LMM A;  2P2X A;  1PJT A;  1PJQ A;  2EK7 A;  2YBQ A;  3F7T A;  2Z6R A;  3SZU A;  2E4R A;  2PCA A;  2ELD A;  1WYZ A;  2DSG A;  2EL3 A;  2PCG A;  3NEI A;  2EGL A;  2PCI A;  1VHV A;  3KEM A;  4MUY A;  1V9A A;  4H4C A;  2CBF A;  2YBO A;  1CBF A;  3UV7 A;  2QBU A;  2EL1 A;  4E16 A;  1WDE A;  2DV4 A;  2NPN A;  2EH2 A;  2ED3 A;  2EK4 A;  3KE8 A;  2EMU A;  3UV6 A;  2EH5 A;  2EL2 A;  2E08 A;  4MV0 A;  2DXX A;  2E15 A;  3UTD A;  2P6K A;  4MUX A;  2PB5 A; 
#chains in the Genus database with same CATH homology
 1S4D A;  2PB6 A;  2BB3 A;  2EEQ A;  1PJS A;  2DV5 A;  2DV7 A;  2E4N A;  2HUX A;  2ENI A;  2EHL A;  2EJJ A;  2ED5 A;  2HUT A;  3T0F A;  3KE9 A;  3T0G A;  2E8H A;  3HH1 A;  2OWF A;  3ND1 A;  2E8Q A;  1WNG A;  2E0N A;  3ZGL A;  3UTC A;  1VE2 A;  2E8R A;  2DSH A;  2DV3 A;  4EB3 A;  3FFY A;  1VA0 A;  2E16 A;  4H4D A;  2P6D A;  2EH4 A;  2P5F A;  2DEK A;  2ZVB A;  2P6L A;  4H4E A;  2EMR A;  2P5C A;  2EGB A;  2EJZ A;  3UWM A;  3KEF A;  2DXW A;  2E17 A;  3TIX B;  3DNF A;  4MV5 A;  2OWK A;  1VCE A;  2HUV A;  2EHC A;  2EK3 A;  2PCM A;  3FQ6 A;  3I4T A;  2E8S A;  2P9D A;  2EJK A;  2EL0 A;  2PB4 A;  2HUQ A;  2OWG A;  3ZGN A;  3URK A;  3KEL A;  2DXV A;  2ZVC A;  3UV3 A;  2EN5 A;  3NDC A;  2EGS A;  2P6I A;  2E7R A;  3KWP A;  2OWU A;  2OWV A;  3SZL A;  2HR8 A;  2E0K A;  2KYY A;  5HW4 A;  2E07 A;  2PCK A;  2EKA A;  3SZO A;  2ELE A;  3NUT A;  2DSI A;  4N7B A;  2EK2 A;  2PCH A;  3LMM A;  2P2X A;  1PJT A;  1PJQ A;  2EK7 A;  2YBQ A;  3F7T A;  2Z6R A;  3SZU A;  2E4R A;  2PCA A;  2ELD A;  1WYZ A;  2DSG A;  2EL3 A;  2PCG A;  3NEI A;  2EGL A;  2PCI A;  1VHV A;  3KEM A;  4MUY A;  1V9A A;  4H4C A;  2CBF A;  2YBO A;  1CBF A;  3UV7 A;  2QBU A;  2EL1 A;  4E16 A;  1WDE A;  2DV4 A;  2NPN A;  2EH2 A;  2ED3 A;  2EK4 A;  3KE8 A;  2EMU A;  3UV6 A;  2EH5 A;  2EL2 A;  2E08 A;  4MV0 A;  2DXX A;  2E15 A;  3UTD A;  2P6K A;  4MUX A;  2PB5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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