2BWSA

His243ala escherichia coli aminopeptidase p
Total Genus 160
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
160
sequence length
440
structure length
439
Chain Sequence
SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILAYTENEEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords XAA-PRO AMINOPEPTIDASE P
publication title Kinetic and Crystallographic Analysis of Mutant Escherichia Coli Aminopeptidase P: Insights Into Substrate Recognition and the Mechanism of Catalysis.
pubmed doi rcsb
source organism Escherichia coli
total genus 160
structure length 439
sequence length 440
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2005-07-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2bwsA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2bwsA02
4FLJA 3BIPA 1YW7A 2B3HA 4OOKA 2BWYA 2GG7A 4FLLA 3I7MA 3PN9A 1C24A 1XGSA 2BHBA 3L24A 4S2TP 4IDYA 4B28A 3OVKA 1XGMA 3IU7A 4U73A 2IW2A 2Q93A 3PKAA 4PNCA 1WY2A 2OKNA 3FM3A 2V3XA 3QOCA 1KQ9A 3IL0A 1QXWA 4S00A 1CHMA 1B59A 2B3LA 5CIKA 1C21A 1PV9A 2GG8A 1KP0A 4S01A 1R5GA 4U6WA 2EA2A 4U6JA 2V3YA 5E2CA 1C27A 2GU5A 1BOAA 2BB7A 3BITA 4U6EA 2B3KA 1XGOA 1XGNA 2BHAA 2GU4A 2GG3A 3CB5A 3FMQA 2Q92A 2BHCA 4IKTA 5JFRA 4U1BA 5CDEA 3IU9A 5D6FA 1B6AA 2BHDA 1YW8A 4IKUA 2BWTA 1QXZA 5JHUA 1R5HA 3O5VA 4A6VA 4FUKA 1W7VA 2GG5A 2ZSGA 2GGCA 4U6CA 4FKCA 2DFIA 2GU6A 1O0XA 3MX6A 1BN5A 3PKDA 4RZZA 3CTZA 4IECA 1WKMA 4S2RP 2GTXA 4FLIA 1YJ3A 4IU6A 2HOWA 4U71A 4A6WA 2BN7A 3Q6DA 4ZWOA 4ZWPA 2GG0A 1R58A 1XNZA 4U69A 1YVMA 3BIQA 4FO7A 5FCHA 1C22A 1QXYA 4IKRA 5D6EA 5FCFA 2BH3A 4QR8A 5E5BA 4ZWUA 2ADUA 4FLKA 4MATA 2BWXA 4U6ZA 3D27A 4Z7MA 1WLRA 3PKCA 4PV4A 1C23A 2NQ6A 1Y1NA 4FO8A 1M35A 1KQ0A 3MATA 1N51A 3IG4A 5CDVA 2V3ZA 2OAZA 4KM3A 5CNXA 2P98A 2Q96A 3TAVA 2GGBA 2G6PA 2BWWA 5CE6A 1W2MA 4RGZ1 4IKSA 2GU7A 1A16A 3RVAA 3L7GA 3OOOA 3CB6A 1MATA 2Q94A 1YW9A 3TB5A 3FMRA 4U70A 2EVCA 2BWUA 2Q95A 1QZYA 3MR1A 4JUQA 2EVOA 1WL9A 4R60A 4U76A 3S6BA 2NQ7A 4ZNGA 5CDLA 1WBQA 2GZ5A 3PEBA 3IU8A 1WN1A 4HXXA 1WL6A 2GG9A 5CLSA 2V6CA 4U75A 2GA2A 4IPAA 2P99A 2EVMA 2GG2A 3RORA 5JI6A 4EGEA 1JAWA 4IF7A 2BWSA 4RZYA 3PKBA 2Q8KA 2P9AA 3PKEA 2MATA 2EA4A 2BWVA
chains in the Genus database with same CATH superfamily
4FLJA 3BIPA 1YW7A 2B3HA 4OOKA 2BWYA 2GG7A 4FLLA 3I7MA 3PN9A 1C24A 1XGSA 2BHBA 3L24A 4S2TP 4IDYA 4B28A 3OVKA 1XGMA 3IU7A 4U73A 2IW2A 2Q93A 3PKAA 4PNCA 1WY2A 2OKNA 3FM3A 2V3XA 3QOCA 1KQ9A 3IL0A 1QXWA 4S00A 1CHMA 1B59A 2B3LA 5CIKA 1C21A 1PV9A 2GG8A 1KP0A 4S01A 1R5GA 4U6WA 2EA2A 4U6JA 2V3YA 5E2CA 1C27A 2GU5A 1BOAA 2BB7A 3BITA 4U6EA 2B3KA 1XGOA 1XGNA 2BHAA 2GU4A 2GG3A 3CB5A 3FMQA 2Q92A 2BHCA 4IKTA 5JFRA 4U1BA 5CDEA 3IU9A 5D6FA 1B6AA 2BHDA 1YW8A 4IKUA 2BWTA 1QXZA 5JHUA 1R5HA 3O5VA 4A6VA 4FUKA 1W7VA 2GG5A 2ZSGA 2GGCA 4U6CA 4FKCA 2DFIA 2GU6A 1O0XA 3MX6A 1BN5A 3PKDA 4RZZA 3CTZA 4IECA 1WKMA 4S2RP 2GTXA 4FLIA 1YJ3A 4IU6A 2HOWA 4U71A 4A6WA 2BN7A 3Q6DA 4ZWOA 4ZWPA 2GG0A 1R58A 1XNZA 4U69A 1YVMA 3BIQA 4FO7A 5FCHA 1C22A 1QXYA 4IKRA 5D6EA 5FCFA 2BH3A 4QR8A 5E5BA 4ZWUA 2ADUA 4FLKA 4MATA 2BWXA 4U6ZA 3D27A 4Z7MA 1WLRA 3PKCA 4PV4A 1C23A 2NQ6A 1Y1NA 4FO8A 1M35A 1KQ0A 3MATA 1N51A 3IG4A 5CDVA 2V3ZA 2OAZA 4KM3A 5CNXA 2P98A 2Q96A 3TAVA 2GGBA 2G6PA 2BWWA 5CE6A 1W2MA 4RGZ1 4IKSA 2GU7A 1A16A 3RVAA 3L7GA 3OOOA 3CB6A 1MATA 2Q94A 1YW9A 3TB5A 3FMRA 4U70A 2EVCA 2BWUA 2Q95A 1QZYA 3MR1A 4JUQA 2EVOA 1WL9A 4R60A 4U76A 3S6BA 2NQ7A 4ZNGA 5CDLA 1WBQA 2GZ5A 3PEBA 3IU8A 1WN1A 4HXXA 1WL6A 2GG9A 5CLSA 2V6CA 4U75A 2GA2A 4IPAA 2P99A 2EVMA 2GG2A 3RORA 5JI6A 4EGEA 1JAWA 4IF7A 2BWSA 4RZYA 3PKBA 2Q8KA 2P9AA 3PKEA 2MATA 2EA4A 2BWVA
chains in the Genus database with same CATH topology
4FLJA 3BIPA 1YW7A 2B3HA 4OOKA 2BWYA 2GG7A 4FLLA 3I7MA 3PN9A 1C24A 1XGSA 2BHBA 3L24A 4S2TP 4IDYA 4B28A 3OVKA 1XGMA 3IU7A 4U73A 2IW2A 2Q93A 3PKAA 4PNCA 1WY2A 2OKNA 3FM3A 2V3XA 3QOCA 1KQ9A 3IL0A 1QXWA 4S00A 1CHMA 1B59A 2B3LA 5CIKA 1C21A 1PV9A 2GG8A 1KP0A 4S01A 1R5GA 4U6WA 2EA2A 4U6JA 2V3YA 5E2CA 1C27A 2GU5A 1BOAA 2BB7A 3BITA 4U6EA 2B3KA 1XGOA 1XGNA 2BHAA 2GU4A 2GG3A 3CB5A 3FMQA 2Q92A 2BHCA 4IKTA 5JFRA 4U1BA 5CDEA 3IU9A 5D6FA 1B6AA 2BHDA 1YW8A 4IKUA 2BWTA 1QXZA 5JHUA 1R5HA 3O5VA 4A6VA 4FUKA 1W7VA 2GG5A 2ZSGA 2GGCA 4U6CA 4FKCA 2DFIA 2GU6A 1O0XA 3MX6A 1BN5A 3PKDA 4RZZA 3CTZA 4IECA 1WKMA 4S2RP 2GTXA 4FLIA 1YJ3A 4IU6A 2HOWA 4U71A 4A6WA 2BN7A 3Q6DA 4ZWOA 4ZWPA 2GG0A 1R58A 1XNZA 4U69A 1YVMA 3BIQA 4FO7A 5FCHA 1C22A 1QXYA 4IKRA 5D6EA 5FCFA 2BH3A 4QR8A 5E5BA 4ZWUA 2ADUA 4FLKA 4MATA 2BWXA 4U6ZA 3D27A 4Z7MA 1WLRA 3PKCA 4PV4A 1C23A 2NQ6A 1Y1NA 4FO8A 1M35A 1KQ0A 3MATA 1N51A 3IG4A 5CDVA 2V3ZA 2OAZA 4KM3A 5CNXA 2P98A 2Q96A 3TAVA 2GGBA 2G6PA 2BWWA 5CE6A 1W2MA 4RGZ1 4IKSA 2GU7A 1A16A 3RVAA 3L7GA 3OOOA 3CB6A 1MATA 2Q94A 1YW9A 3TB5A 3FMRA 4U70A 2EVCA 2BWUA 2Q95A 1QZYA 3MR1A 4JUQA 2EVOA 1WL9A 4R60A 4U76A 3S6BA 2NQ7A 4ZNGA 5CDLA 1WBQA 2GZ5A 3PEBA 3IU8A 1WN1A 4HXXA 1WL6A 2GG9A 5CLSA 2V6CA 4U75A 2GA2A 4IPAA 2P99A 2EVMA 2GG2A 3RORA 5JI6A 4EGEA 1JAWA 4IF7A 2BWSA 4RZYA 3PKBA 2Q8KA 2P9AA 3PKEA 2MATA 2EA4A 2BWVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FLJ A;  3BIP A;  1YW7 A;  2B3H A;  4OOK A;  2BWY A;  2GG7 A;  4FLL A;  3I7M A;  3PN9 A;  1C24 A;  1XGS A;  2BHB A;  3L24 A;  4S2T P;  4IDY A;  4B28 A;  3OVK A;  1XGM A;  3IU7 A;  4U73 A;  2IW2 A;  2Q93 A;  3PKA A;  4PNC A;  1WY2 A;  2OKN A;  3FM3 A;  2V3X A;  3QOC A;  1KQ9 A;  3IL0 A;  1QXW A;  4S00 A;  1CHM A;  1B59 A;  2B3L A;  5CIK A;  1C21 A;  1PV9 A;  2GG8 A;  1KP0 A;  4S01 A;  1R5G A;  4U6W A;  2EA2 A;  4U6J A;  2V3Y A;  5E2C A;  1C27 A;  2GU5 A;  1BOA A;  2BB7 A;  3BIT A;  4U6E A;  2B3K A;  1XGO A;  1XGN A;  2BHA A;  2GU4 A;  2GG3 A;  3CB5 A;  3FMQ A;  2Q92 A;  2BHC A;  4IKT A;  5JFR A;  4U1B A;  5CDE A;  3IU9 A;  5D6F A;  1B6A A;  2BHD A;  1YW8 A;  4IKU A;  2BWT A;  1QXZ A;  5JHU A;  1R5H A;  3O5V A;  4A6V A;  4FUK A;  1W7V A;  2GG5 A;  2ZSG A;  2GGC A;  4U6C A;  4FKC A;  2DFI A;  2GU6 A;  1O0X A;  3MX6 A;  1BN5 A;  3PKD A;  4RZZ A;  3CTZ A;  4IEC A;  1WKM A;  4S2R P;  2GTX A;  4FLI A;  1YJ3 A;  4IU6 A;  2HOW A;  4U71 A;  4A6W A;  2BN7 A;  3Q6D A;  4ZWO A;  4ZWP A;  2GG0 A;  1R58 A;  1XNZ A;  4U69 A;  1YVM A;  3BIQ A;  4FO7 A;  5FCH A;  1C22 A;  1QXY A;  4IKR A;  5D6E A;  5FCF A;  2BH3 A;  4QR8 A;  5E5B A;  4ZWU A;  2ADU A;  4FLK A;  4MAT A;  2BWX A;  4U6Z A;  3D27 A;  4Z7M A;  1WLR A;  3PKC A;  4PV4 A;  1C23 A;  2NQ6 A;  1Y1N A;  4FO8 A;  1M35 A;  1KQ0 A;  3MAT A;  1N51 A;  3IG4 A;  5CDV A;  2V3Z A;  2OAZ A;  4KM3 A;  5CNX A;  2P98 A;  2Q96 A;  3TAV A;  2GGB A;  2G6P A;  2BWW A;  5CE6 A;  1W2M A;  4RGZ 1;  4IKS A;  2GU7 A;  1A16 A;  3RVA A;  3L7G A;  3OOO A;  3CB6 A;  1MAT A;  2Q94 A;  1YW9 A;  3TB5 A;  3FMR A;  4U70 A;  2EVC A;  2BWU A;  2Q95 A;  1QZY A;  3MR1 A;  4JUQ A;  2EVO A;  1WL9 A;  4R60 A;  4U76 A;  3S6B A;  2NQ7 A;  4ZNG A;  5CDL A;  1WBQ A;  2GZ5 A;  3PEB A;  3IU8 A;  1WN1 A;  4HXX A;  1WL6 A;  2GG9 A;  5CLS A;  2V6C A;  4U75 A;  2GA2 A;  4IPA A;  2P99 A;  2EVM A;  2GG2 A;  3ROR A;  5JI6 A;  4EGE A;  1JAW A;  4IF7 A;  2BWS A;  4RZY A;  3PKB A;  2Q8K A;  2P9A A;  3PKE A;  2MAT A;  2EA4 A;  2BWV A; 
#chains in the Genus database with same CATH topology
 4FLJ A;  3BIP A;  1YW7 A;  2B3H A;  4OOK A;  2BWY A;  2GG7 A;  4FLL A;  3I7M A;  3PN9 A;  1C24 A;  1XGS A;  2BHB A;  3L24 A;  4S2T P;  4IDY A;  4B28 A;  3OVK A;  1XGM A;  3IU7 A;  4U73 A;  2IW2 A;  2Q93 A;  3PKA A;  4PNC A;  1WY2 A;  2OKN A;  3FM3 A;  2V3X A;  3QOC A;  1KQ9 A;  3IL0 A;  1QXW A;  4S00 A;  1CHM A;  1B59 A;  2B3L A;  5CIK A;  1C21 A;  1PV9 A;  2GG8 A;  1KP0 A;  4S01 A;  1R5G A;  4U6W A;  2EA2 A;  4U6J A;  2V3Y A;  5E2C A;  1C27 A;  2GU5 A;  1BOA A;  2BB7 A;  3BIT A;  4U6E A;  2B3K A;  1XGO A;  1XGN A;  2BHA A;  2GU4 A;  2GG3 A;  3CB5 A;  3FMQ A;  2Q92 A;  2BHC A;  4IKT A;  5JFR A;  4U1B A;  5CDE A;  3IU9 A;  5D6F A;  1B6A A;  2BHD A;  1YW8 A;  4IKU A;  2BWT A;  1QXZ A;  5JHU A;  1R5H A;  3O5V A;  4A6V A;  4FUK A;  1W7V A;  2GG5 A;  2ZSG A;  2GGC A;  4U6C A;  4FKC A;  2DFI A;  2GU6 A;  1O0X A;  3MX6 A;  1BN5 A;  3PKD A;  4RZZ A;  3CTZ A;  4IEC A;  1WKM A;  4S2R P;  2GTX A;  4FLI A;  1YJ3 A;  4IU6 A;  2HOW A;  4U71 A;  4A6W A;  2BN7 A;  3Q6D A;  4ZWO A;  4ZWP A;  2GG0 A;  1R58 A;  1XNZ A;  4U69 A;  1YVM A;  3BIQ A;  4FO7 A;  5FCH A;  1C22 A;  1QXY A;  4IKR A;  5D6E A;  5FCF A;  2BH3 A;  4QR8 A;  5E5B A;  4ZWU A;  2ADU A;  4FLK A;  4MAT A;  2BWX A;  4U6Z A;  3D27 A;  4Z7M A;  1WLR A;  3PKC A;  4PV4 A;  1C23 A;  2NQ6 A;  1Y1N A;  4FO8 A;  1M35 A;  1KQ0 A;  3MAT A;  1N51 A;  3IG4 A;  5CDV A;  2V3Z A;  2OAZ A;  4KM3 A;  5CNX A;  2P98 A;  2Q96 A;  3TAV A;  2GGB A;  2G6P A;  2BWW A;  5CE6 A;  1W2M A;  4RGZ 1;  4IKS A;  2GU7 A;  1A16 A;  3RVA A;  3L7G A;  3OOO A;  3CB6 A;  1MAT A;  2Q94 A;  1YW9 A;  3TB5 A;  3FMR A;  4U70 A;  2EVC A;  2BWU A;  2Q95 A;  1QZY A;  3MR1 A;  4JUQ A;  2EVO A;  1WL9 A;  4R60 A;  4U76 A;  3S6B A;  2NQ7 A;  4ZNG A;  5CDL A;  1WBQ A;  2GZ5 A;  3PEB A;  3IU8 A;  1WN1 A;  4HXX A;  1WL6 A;  2GG9 A;  5CLS A;  2V6C A;  4U75 A;  2GA2 A;  4IPA A;  2P99 A;  2EVM A;  2GG2 A;  3ROR A;  5JI6 A;  4EGE A;  1JAW A;  4IF7 A;  2BWS A;  4RZY A;  3PKB A;  2Q8K A;  2P9A A;  3PKE A;  2MAT A;  2EA4 A;  2BWV A; 
#chains in the Genus database with same CATH homology
 4FLJ A;  3BIP A;  1YW7 A;  2B3H A;  4OOK A;  2BWY A;  2GG7 A;  4FLL A;  3I7M A;  3PN9 A;  1C24 A;  1XGS A;  2BHB A;  3L24 A;  4S2T P;  4IDY A;  4B28 A;  3OVK A;  1XGM A;  3IU7 A;  4U73 A;  2IW2 A;  2Q93 A;  3PKA A;  4PNC A;  1WY2 A;  2OKN A;  3FM3 A;  2V3X A;  3QOC A;  1KQ9 A;  3IL0 A;  1QXW A;  4S00 A;  1CHM A;  1B59 A;  2B3L A;  5CIK A;  1C21 A;  1PV9 A;  2GG8 A;  1KP0 A;  4S01 A;  1R5G A;  4U6W A;  2EA2 A;  4U6J A;  2V3Y A;  5E2C A;  1C27 A;  2GU5 A;  1BOA A;  2BB7 A;  3BIT A;  4U6E A;  2B3K A;  1XGO A;  1XGN A;  2BHA A;  2GU4 A;  2GG3 A;  3CB5 A;  3FMQ A;  2Q92 A;  2BHC A;  4IKT A;  5JFR A;  4U1B A;  5CDE A;  3IU9 A;  5D6F A;  1B6A A;  2BHD A;  1YW8 A;  4IKU A;  2BWT A;  1QXZ A;  5JHU A;  1R5H A;  3O5V A;  4A6V A;  4FUK A;  1W7V A;  2GG5 A;  2ZSG A;  2GGC A;  4U6C A;  4FKC A;  2DFI A;  2GU6 A;  1O0X A;  3MX6 A;  1BN5 A;  3PKD A;  4RZZ A;  3CTZ A;  4IEC A;  1WKM A;  4S2R P;  2GTX A;  4FLI A;  1YJ3 A;  4IU6 A;  2HOW A;  4U71 A;  4A6W A;  2BN7 A;  3Q6D A;  4ZWO A;  4ZWP A;  2GG0 A;  1R58 A;  1XNZ A;  4U69 A;  1YVM A;  3BIQ A;  4FO7 A;  5FCH A;  1C22 A;  1QXY A;  4IKR A;  5D6E A;  5FCF A;  2BH3 A;  4QR8 A;  5E5B A;  4ZWU A;  2ADU A;  4FLK A;  4MAT A;  2BWX A;  4U6Z A;  3D27 A;  4Z7M A;  1WLR A;  3PKC A;  4PV4 A;  1C23 A;  2NQ6 A;  1Y1N A;  4FO8 A;  1M35 A;  1KQ0 A;  3MAT A;  1N51 A;  3IG4 A;  5CDV A;  2V3Z A;  2OAZ A;  4KM3 A;  5CNX A;  2P98 A;  2Q96 A;  3TAV A;  2GGB A;  2G6P A;  2BWW A;  5CE6 A;  1W2M A;  4RGZ 1;  4IKS A;  2GU7 A;  1A16 A;  3RVA A;  3L7G A;  3OOO A;  3CB6 A;  1MAT A;  2Q94 A;  1YW9 A;  3TB5 A;  3FMR A;  4U70 A;  2EVC A;  2BWU A;  2Q95 A;  1QZY A;  3MR1 A;  4JUQ A;  2EVO A;  1WL9 A;  4R60 A;  4U76 A;  3S6B A;  2NQ7 A;  4ZNG A;  5CDL A;  1WBQ A;  2GZ5 A;  3PEB A;  3IU8 A;  1WN1 A;  4HXX A;  1WL6 A;  2GG9 A;  5CLS A;  2V6C A;  4U75 A;  2GA2 A;  4IPA A;  2P99 A;  2EVM A;  2GG2 A;  3ROR A;  5JI6 A;  4EGE A;  1JAW A;  4IF7 A;  2BWS A;  4RZY A;  3PKB A;  2Q8K A;  2P9A A;  3PKE A;  2MAT A;  2EA4 A;  2BWV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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