2F3GA

Iiaglc crystal form iii
Total Genus 34
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
34
sequence length
150
structure length
150
Chain Sequence
TIEIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGEGFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLSGSVTVGETPVIRIKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Phosphotransferase
molecule keywords GLUCOSE-SPECIFIC PHOSPHOCARRIER
publication title Structural studies of the Escherichia coli signal transducing protein IIAGlc: implications for target recognition.
pubmed doi rcsb
total genus 34
structure length 150
sequence length 150
chains with identical sequence B
ec nomenclature ec 2.7.1.69: Transferred entry: 2.7.1.191, 2.7.1.192, 2.7.1.193, 2.7.1.194, 2.7.1.195,
pdb deposition date 1997-10-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00358 PTS_EIIA_1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.70.10 Mainly Beta Distorted Sandwich Glucose Permease (Domain IIA) Glucose Permease (Domain IIA) 2f3gA00
1GLDF 1GLAF 2GU1A 1AX3A 2B0PA 4ZYBA 4JBWM 3OURB 3CSQA 2HSIA 2F3GA 4LXCA 2MP0B 1F3ZA 4BH5A 1GGRA 3IT7A 3IT5A 1O2FA 4QPBA 1GPRA 1QWYA 3NYYA 4QP5A 5B0HA 4RNYA 3UZ0B 5KVPA 4RNZA 2B44A 2B13A 1F3GA 1GLBF 1GLEF 3TUFB 3SLUA 2GPRA 1GLCF
chains in the Genus database with same CATH superfamily
1GLDF 1GLAF 2GU1A 1AX3A 2B0PA 4ZYBA 4JBWM 3OURB 3CSQA 2HSIA 2F3GA 4LXCA 2MP0B 1F3ZA 4BH5A 1GGRA 3IT7A 3IT5A 1O2FA 4QPBA 1GPRA 1QWYA 3NYYA 4QP5A 5B0HA 4RNYA 3UZ0B 5KVPA 4RNZA 2B44A 2B13A 1F3GA 1GLBF 1GLEF 3TUFB 3SLUA 2GPRA 1GLCF
chains in the Genus database with same CATH topology
1GLDF 1GLAF 2GU1A 1AX3A 2B0PA 4ZYBA 4JBWM 3OURB 3CSQA 2HSIA 2F3GA 4LXCA 2MP0B 1F3ZA 4BH5A 1GGRA 3IT7A 3IT5A 1O2FA 4QPBA 1GPRA 1QWYA 3NYYA 4QP5A 5B0HA 4RNYA 3UZ0B 5KVPA 4RNZA 2B44A 2B13A 1F3GA 1GLBF 1GLEF 3TUFB 3SLUA 2GPRA 1GLCF
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1GLD F;  1GLA F;  2GU1 A;  1AX3 A;  2B0P A;  4ZYB A;  4JBW M;  3OUR B;  3CSQ A;  2HSI A;  2F3G A;  4LXC A;  2MP0 B;  1F3Z A;  4BH5 A;  1GGR A;  3IT7 A;  3IT5 A;  1O2F A;  4QPB A;  1GPR A;  1QWY A;  3NYY A;  4QP5 A;  5B0H A;  4RNY A;  3UZ0 B;  5KVP A;  4RNZ A;  2B44 A;  2B13 A;  1F3G A;  1GLB F;  1GLE F;  3TUF B;  3SLU A;  2GPR A;  1GLC F; 
#chains in the Genus database with same CATH topology
 1GLD F;  1GLA F;  2GU1 A;  1AX3 A;  2B0P A;  4ZYB A;  4JBW M;  3OUR B;  3CSQ A;  2HSI A;  2F3G A;  4LXC A;  2MP0 B;  1F3Z A;  4BH5 A;  1GGR A;  3IT7 A;  3IT5 A;  1O2F A;  4QPB A;  1GPR A;  1QWY A;  3NYY A;  4QP5 A;  5B0H A;  4RNY A;  3UZ0 B;  5KVP A;  4RNZ A;  2B44 A;  2B13 A;  1F3G A;  1GLB F;  1GLE F;  3TUF B;  3SLU A;  2GPR A;  1GLC F; 
#chains in the Genus database with same CATH homology
 1GLD F;  1GLA F;  2GU1 A;  1AX3 A;  2B0P A;  4ZYB A;  4JBW M;  3OUR B;  3CSQ A;  2HSI A;  2F3G A;  4LXC A;  2MP0 B;  1F3Z A;  4BH5 A;  1GGR A;  3IT7 A;  3IT5 A;  1O2F A;  4QPB A;  1GPR A;  1QWY A;  3NYY A;  4QP5 A;  5B0H A;  4RNY A;  3UZ0 B;  5KVP A;  4RNZ A;  2B44 A;  2B13 A;  1F3G A;  1GLB F;  1GLE F;  3TUF B;  3SLU A;  2GPR A;  1GLC F; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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