2GU4A

E. coli methionine aminopeptidase in complex with nlep, 1: 0.5, di-metalated
Total Genus 91
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
91
sequence length
261
structure length
261
Chain Sequence
SIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Methionine aminopeptidase
publication title Structural basis of catalysis by monometalated methionine aminopeptidase.
pubmed doi rcsb
source organism Escherichia coli
total genus 91
structure length 261
sequence length 261
chains with identical sequence B
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2006-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2gu4A00
2GGBA 2BH3A 5CLSA 2HOWA 3FMQA 2GU4A 3L24A 2B3LA 4FO8A 2GG2A 4U1BA 4S00A 4A6WA 2Q96A 3BITA 4QR8A 1QXWA 4IF7A 2Q93A 1BOAA 2Q94A 2P9AA 2EVMA 1W7VA 1QXZA 4U69A 1QZYA 2V3XA 4EGEA 4IECA 1YW7A 4MATA 3IU7A 1C24A 2GU7A 1QXYA 1KQ0A 1W2MA 2GU5A 1YW8A 2ZSGA 5FCFA 1XGSA 4FKCA 2BB7A 1XGMA 1O0XA 1R5GA 2IW2A 2GA2A 3CTZA 4S2RP 3RVAA 2GTXA 2GG0A 5D6EA 5CIKA 4R60A 3TB5A 4OOKA 4S2TP 4IKTA 1XNZA 5JHUA 3L7GA 2DFIA 4U71A 4PV4A 4ZWPA 2GG7A 1XGNA 4FUKA 5JI6A 5CNXA 1N51A 2ADUA 2V3YA 2BWVA 4IKUA 1M35A 1WN1A 3FM3A 1YW9A 2BWTA 3PKAA 4U6WA 2BWXA 3IU9A 1XGOA 3RORA 5CDEA 4RGZ1 1C23A 4RZZA 4IU6A 1KQ9A 3MX6A 4ZWUA 1WBQA 2P99A 2BHBA 2EVCA 4U70A 4B28A 1WY2A 2BWWA 3MATA 3CB5A 2EA2A 2Q95A 4FLIA 2GGCA 2G6PA 3BIQA 5JFRA 2NQ6A 1WL9A 2BHDA 1CHMA 4IPAA 4IKRA 4IDYA 1WLRA 1R5HA 1JAWA 1PV9A 3D27A 4Z7MA 4PNCA 4U6ZA 2BHCA 3S6BA 5D6FA 2EVOA 1B59A 1YJ3A 3Q6DA 1R58A 2B3HA 2BN7A 3IU8A 4FLJA 4U76A 2GG3A 1MATA 3IG4A 4A6VA 2V3ZA 4U75A 2V6CA 4HXXA 4ZWOA 1BN5A 1C22A 1A16A 4U6EA 4KM3A 1KP0A 2GZ5A 5CE6A 4FO7A 2B3KA 4ZNGA 5FCHA 2GG8A 1B6AA 3TAVA 3BIPA 3CB6A 2GG9A 2BWUA 1C27A 2MATA 2Q92A 3FMRA 3PKBA 3PKDA 4FLKA 1YVMA 4IKSA 4S01A 2P98A 4U6JA 2BWSA 2NQ7A 3PKCA 2GG5A 1WL6A 4FLLA 4U6CA 4JUQA 3MR1A 5E5BA 1C21A 1Y1NA 2EA4A 4U73A 2BHAA 5CDVA 2OAZA 2BWYA 2OKNA 5CDLA 1WKMA 3PKEA 2GU6A 2Q8KA 4RZYA
chains in the Genus database with same CATH superfamily
2GGBA 2BH3A 5CLSA 2HOWA 3FMQA 2GU4A 3L24A 2B3LA 4FO8A 2GG2A 4U1BA 4S00A 4A6WA 2Q96A 3BITA 4QR8A 1QXWA 4IF7A 2Q93A 1BOAA 2Q94A 2P9AA 2EVMA 1W7VA 1QXZA 4U69A 1QZYA 2V3XA 4EGEA 4IECA 1YW7A 4MATA 3IU7A 1C24A 2GU7A 1QXYA 1KQ0A 1W2MA 2GU5A 1YW8A 2ZSGA 5FCFA 1XGSA 4FKCA 2BB7A 1XGMA 1O0XA 1R5GA 2IW2A 2GA2A 3CTZA 4S2RP 3RVAA 2GTXA 2GG0A 5D6EA 5CIKA 4R60A 3TB5A 4OOKA 4S2TP 4IKTA 1XNZA 5JHUA 3L7GA 2DFIA 4U71A 4PV4A 4ZWPA 2GG7A 1XGNA 4FUKA 5JI6A 5CNXA 1N51A 2ADUA 2V3YA 2BWVA 4IKUA 1M35A 1WN1A 3FM3A 1YW9A 2BWTA 3PKAA 4U6WA 2BWXA 3IU9A 1XGOA 3RORA 5CDEA 4RGZ1 1C23A 4RZZA 4IU6A 1KQ9A 3MX6A 4ZWUA 1WBQA 2P99A 2BHBA 2EVCA 4U70A 4B28A 1WY2A 2BWWA 3MATA 3CB5A 2EA2A 2Q95A 4FLIA 2GGCA 2G6PA 3BIQA 5JFRA 2NQ6A 1WL9A 2BHDA 1CHMA 4IPAA 4IKRA 4IDYA 1WLRA 1R5HA 1JAWA 1PV9A 3D27A 4Z7MA 4PNCA 4U6ZA 2BHCA 3S6BA 5D6FA 2EVOA 1B59A 1YJ3A 3Q6DA 1R58A 2B3HA 2BN7A 3IU8A 4FLJA 4U76A 2GG3A 1MATA 3IG4A 4A6VA 2V3ZA 4U75A 2V6CA 4HXXA 4ZWOA 1BN5A 1C22A 1A16A 4U6EA 4KM3A 1KP0A 2GZ5A 5CE6A 4FO7A 2B3KA 4ZNGA 5FCHA 2GG8A 1B6AA 3TAVA 3BIPA 3CB6A 2GG9A 2BWUA 1C27A 2MATA 2Q92A 3FMRA 3PKBA 3PKDA 4FLKA 1YVMA 4IKSA 4S01A 2P98A 4U6JA 2BWSA 2NQ7A 3PKCA 2GG5A 1WL6A 4FLLA 4U6CA 4JUQA 3MR1A 5E5BA 1C21A 1Y1NA 2EA4A 4U73A 2BHAA 5CDVA 2OAZA 2BWYA 2OKNA 5CDLA 1WKMA 3PKEA 2GU6A 2Q8KA 4RZYA
chains in the Genus database with same CATH topology
2GGBA 2BH3A 5CLSA 2HOWA 3FMQA 2GU4A 3L24A 2B3LA 4FO8A 2GG2A 4U1BA 4S00A 4A6WA 2Q96A 3BITA 4QR8A 1QXWA 4IF7A 2Q93A 1BOAA 2Q94A 2P9AA 2EVMA 1W7VA 1QXZA 4U69A 1QZYA 2V3XA 4EGEA 4IECA 1YW7A 4MATA 3IU7A 1C24A 2GU7A 1QXYA 1KQ0A 1W2MA 2GU5A 1YW8A 2ZSGA 5FCFA 1XGSA 4FKCA 2BB7A 1XGMA 1O0XA 1R5GA 2IW2A 2GA2A 3CTZA 4S2RP 3RVAA 2GTXA 2GG0A 5D6EA 5CIKA 4R60A 3TB5A 4OOKA 4S2TP 4IKTA 1XNZA 5JHUA 3L7GA 2DFIA 4U71A 4PV4A 4ZWPA 2GG7A 1XGNA 4FUKA 5JI6A 5CNXA 1N51A 2ADUA 2V3YA 2BWVA 4IKUA 1M35A 1WN1A 3FM3A 1YW9A 2BWTA 3PKAA 4U6WA 2BWXA 3IU9A 1XGOA 3RORA 5CDEA 4RGZ1 1C23A 4RZZA 4IU6A 1KQ9A 3MX6A 4ZWUA 1WBQA 2P99A 2BHBA 2EVCA 4U70A 4B28A 1WY2A 2BWWA 3MATA 3CB5A 2EA2A 2Q95A 4FLIA 2GGCA 2G6PA 3BIQA 5JFRA 2NQ6A 1WL9A 2BHDA 1CHMA 4IPAA 4IKRA 4IDYA 1WLRA 1R5HA 1JAWA 1PV9A 3D27A 4Z7MA 4PNCA 4U6ZA 2BHCA 3S6BA 5D6FA 2EVOA 1B59A 1YJ3A 3Q6DA 1R58A 2B3HA 2BN7A 3IU8A 4FLJA 4U76A 2GG3A 1MATA 3IG4A 4A6VA 2V3ZA 4U75A 2V6CA 4HXXA 4ZWOA 1BN5A 1C22A 1A16A 4U6EA 4KM3A 1KP0A 2GZ5A 5CE6A 4FO7A 2B3KA 4ZNGA 5FCHA 2GG8A 1B6AA 3TAVA 3BIPA 3CB6A 2GG9A 2BWUA 1C27A 2MATA 2Q92A 3FMRA 3PKBA 3PKDA 4FLKA 1YVMA 4IKSA 4S01A 2P98A 4U6JA 2BWSA 2NQ7A 3PKCA 2GG5A 1WL6A 4FLLA 4U6CA 4JUQA 3MR1A 5E5BA 1C21A 1Y1NA 2EA4A 4U73A 2BHAA 5CDVA 2OAZA 2BWYA 2OKNA 5CDLA 1WKMA 3PKEA 2GU6A 2Q8KA 4RZYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GGB A;  2BH3 A;  5CLS A;  2HOW A;  3FMQ A;  2GU4 A;  3L24 A;  2B3L A;  4FO8 A;  2GG2 A;  4U1B A;  4S00 A;  4A6W A;  2Q96 A;  3BIT A;  4QR8 A;  1QXW A;  4IF7 A;  2Q93 A;  1BOA A;  2Q94 A;  2P9A A;  2EVM A;  1W7V A;  1QXZ A;  4U69 A;  1QZY A;  2V3X A;  4EGE A;  4IEC A;  1YW7 A;  4MAT A;  3IU7 A;  1C24 A;  2GU7 A;  1QXY A;  1KQ0 A;  1W2M A;  2GU5 A;  1YW8 A;  2ZSG A;  5FCF A;  1XGS A;  4FKC A;  2BB7 A;  1XGM A;  1O0X A;  1R5G A;  2IW2 A;  2GA2 A;  3CTZ A;  4S2R P;  3RVA A;  2GTX A;  2GG0 A;  5D6E A;  5CIK A;  4R60 A;  3TB5 A;  4OOK A;  4S2T P;  4IKT A;  1XNZ A;  5JHU A;  3L7G A;  2DFI A;  4U71 A;  4PV4 A;  4ZWP A;  2GG7 A;  1XGN A;  4FUK A;  5JI6 A;  5CNX A;  1N51 A;  2ADU A;  2V3Y A;  2BWV A;  4IKU A;  1M35 A;  1WN1 A;  3FM3 A;  1YW9 A;  2BWT A;  3PKA A;  4U6W A;  2BWX A;  3IU9 A;  1XGO A;  3ROR A;  5CDE A;  4RGZ 1;  1C23 A;  4RZZ A;  4IU6 A;  1KQ9 A;  3MX6 A;  4ZWU A;  1WBQ A;  2P99 A;  2BHB A;  2EVC A;  4U70 A;  4B28 A;  1WY2 A;  2BWW A;  3MAT A;  3CB5 A;  2EA2 A;  2Q95 A;  4FLI A;  2GGC A;  2G6P A;  3BIQ A;  5JFR A;  2NQ6 A;  1WL9 A;  2BHD A;  1CHM A;  4IPA A;  4IKR A;  4IDY A;  1WLR A;  1R5H A;  1JAW A;  1PV9 A;  3D27 A;  4Z7M A;  4PNC A;  4U6Z A;  2BHC A;  3S6B A;  5D6F A;  2EVO A;  1B59 A;  1YJ3 A;  3Q6D A;  1R58 A;  2B3H A;  2BN7 A;  3IU8 A;  4FLJ A;  4U76 A;  2GG3 A;  1MAT A;  3IG4 A;  4A6V A;  2V3Z A;  4U75 A;  2V6C A;  4HXX A;  4ZWO A;  1BN5 A;  1C22 A;  1A16 A;  4U6E A;  4KM3 A;  1KP0 A;  2GZ5 A;  5CE6 A;  4FO7 A;  2B3K A;  4ZNG A;  5FCH A;  2GG8 A;  1B6A A;  3TAV A;  3BIP A;  3CB6 A;  2GG9 A;  2BWU A;  1C27 A;  2MAT A;  2Q92 A;  3FMR A;  3PKB A;  3PKD A;  4FLK A;  1YVM A;  4IKS A;  4S01 A;  2P98 A;  4U6J A;  2BWS A;  2NQ7 A;  3PKC A;  2GG5 A;  1WL6 A;  4FLL A;  4U6C A;  4JUQ A;  3MR1 A;  5E5B A;  1C21 A;  1Y1N A;  2EA4 A;  4U73 A;  2BHA A;  5CDV A;  2OAZ A;  2BWY A;  2OKN A;  5CDL A;  1WKM A;  3PKE A;  2GU6 A;  2Q8K A;  4RZY A; 
#chains in the Genus database with same CATH topology
 2GGB A;  2BH3 A;  5CLS A;  2HOW A;  3FMQ A;  2GU4 A;  3L24 A;  2B3L A;  4FO8 A;  2GG2 A;  4U1B A;  4S00 A;  4A6W A;  2Q96 A;  3BIT A;  4QR8 A;  1QXW A;  4IF7 A;  2Q93 A;  1BOA A;  2Q94 A;  2P9A A;  2EVM A;  1W7V A;  1QXZ A;  4U69 A;  1QZY A;  2V3X A;  4EGE A;  4IEC A;  1YW7 A;  4MAT A;  3IU7 A;  1C24 A;  2GU7 A;  1QXY A;  1KQ0 A;  1W2M A;  2GU5 A;  1YW8 A;  2ZSG A;  5FCF A;  1XGS A;  4FKC A;  2BB7 A;  1XGM A;  1O0X A;  1R5G A;  2IW2 A;  2GA2 A;  3CTZ A;  4S2R P;  3RVA A;  2GTX A;  2GG0 A;  5D6E A;  5CIK A;  4R60 A;  3TB5 A;  4OOK A;  4S2T P;  4IKT A;  1XNZ A;  5JHU A;  3L7G A;  2DFI A;  4U71 A;  4PV4 A;  4ZWP A;  2GG7 A;  1XGN A;  4FUK A;  5JI6 A;  5CNX A;  1N51 A;  2ADU A;  2V3Y A;  2BWV A;  4IKU A;  1M35 A;  1WN1 A;  3FM3 A;  1YW9 A;  2BWT A;  3PKA A;  4U6W A;  2BWX A;  3IU9 A;  1XGO A;  3ROR A;  5CDE A;  4RGZ 1;  1C23 A;  4RZZ A;  4IU6 A;  1KQ9 A;  3MX6 A;  4ZWU A;  1WBQ A;  2P99 A;  2BHB A;  2EVC A;  4U70 A;  4B28 A;  1WY2 A;  2BWW A;  3MAT A;  3CB5 A;  2EA2 A;  2Q95 A;  4FLI A;  2GGC A;  2G6P A;  3BIQ A;  5JFR A;  2NQ6 A;  1WL9 A;  2BHD A;  1CHM A;  4IPA A;  4IKR A;  4IDY A;  1WLR A;  1R5H A;  1JAW A;  1PV9 A;  3D27 A;  4Z7M A;  4PNC A;  4U6Z A;  2BHC A;  3S6B A;  5D6F A;  2EVO A;  1B59 A;  1YJ3 A;  3Q6D A;  1R58 A;  2B3H A;  2BN7 A;  3IU8 A;  4FLJ A;  4U76 A;  2GG3 A;  1MAT A;  3IG4 A;  4A6V A;  2V3Z A;  4U75 A;  2V6C A;  4HXX A;  4ZWO A;  1BN5 A;  1C22 A;  1A16 A;  4U6E A;  4KM3 A;  1KP0 A;  2GZ5 A;  5CE6 A;  4FO7 A;  2B3K A;  4ZNG A;  5FCH A;  2GG8 A;  1B6A A;  3TAV A;  3BIP A;  3CB6 A;  2GG9 A;  2BWU A;  1C27 A;  2MAT A;  2Q92 A;  3FMR A;  3PKB A;  3PKD A;  4FLK A;  1YVM A;  4IKS A;  4S01 A;  2P98 A;  4U6J A;  2BWS A;  2NQ7 A;  3PKC A;  2GG5 A;  1WL6 A;  4FLL A;  4U6C A;  4JUQ A;  3MR1 A;  5E5B A;  1C21 A;  1Y1N A;  2EA4 A;  4U73 A;  2BHA A;  5CDV A;  2OAZ A;  2BWY A;  2OKN A;  5CDL A;  1WKM A;  3PKE A;  2GU6 A;  2Q8K A;  4RZY A; 
#chains in the Genus database with same CATH homology
 2GGB A;  2BH3 A;  5CLS A;  2HOW A;  3FMQ A;  2GU4 A;  3L24 A;  2B3L A;  4FO8 A;  2GG2 A;  4U1B A;  4S00 A;  4A6W A;  2Q96 A;  3BIT A;  4QR8 A;  1QXW A;  4IF7 A;  2Q93 A;  1BOA A;  2Q94 A;  2P9A A;  2EVM A;  1W7V A;  1QXZ A;  4U69 A;  1QZY A;  2V3X A;  4EGE A;  4IEC A;  1YW7 A;  4MAT A;  3IU7 A;  1C24 A;  2GU7 A;  1QXY A;  1KQ0 A;  1W2M A;  2GU5 A;  1YW8 A;  2ZSG A;  5FCF A;  1XGS A;  4FKC A;  2BB7 A;  1XGM A;  1O0X A;  1R5G A;  2IW2 A;  2GA2 A;  3CTZ A;  4S2R P;  3RVA A;  2GTX A;  2GG0 A;  5D6E A;  5CIK A;  4R60 A;  3TB5 A;  4OOK A;  4S2T P;  4IKT A;  1XNZ A;  5JHU A;  3L7G A;  2DFI A;  4U71 A;  4PV4 A;  4ZWP A;  2GG7 A;  1XGN A;  4FUK A;  5JI6 A;  5CNX A;  1N51 A;  2ADU A;  2V3Y A;  2BWV A;  4IKU A;  1M35 A;  1WN1 A;  3FM3 A;  1YW9 A;  2BWT A;  3PKA A;  4U6W A;  2BWX A;  3IU9 A;  1XGO A;  3ROR A;  5CDE A;  4RGZ 1;  1C23 A;  4RZZ A;  4IU6 A;  1KQ9 A;  3MX6 A;  4ZWU A;  1WBQ A;  2P99 A;  2BHB A;  2EVC A;  4U70 A;  4B28 A;  1WY2 A;  2BWW A;  3MAT A;  3CB5 A;  2EA2 A;  2Q95 A;  4FLI A;  2GGC A;  2G6P A;  3BIQ A;  5JFR A;  2NQ6 A;  1WL9 A;  2BHD A;  1CHM A;  4IPA A;  4IKR A;  4IDY A;  1WLR A;  1R5H A;  1JAW A;  1PV9 A;  3D27 A;  4Z7M A;  4PNC A;  4U6Z A;  2BHC A;  3S6B A;  5D6F A;  2EVO A;  1B59 A;  1YJ3 A;  3Q6D A;  1R58 A;  2B3H A;  2BN7 A;  3IU8 A;  4FLJ A;  4U76 A;  2GG3 A;  1MAT A;  3IG4 A;  4A6V A;  2V3Z A;  4U75 A;  2V6C A;  4HXX A;  4ZWO A;  1BN5 A;  1C22 A;  1A16 A;  4U6E A;  4KM3 A;  1KP0 A;  2GZ5 A;  5CE6 A;  4FO7 A;  2B3K A;  4ZNG A;  5FCH A;  2GG8 A;  1B6A A;  3TAV A;  3BIP A;  3CB6 A;  2GG9 A;  2BWU A;  1C27 A;  2MAT A;  2Q92 A;  3FMR A;  3PKB A;  3PKD A;  4FLK A;  1YVM A;  4IKS A;  4S01 A;  2P98 A;  4U6J A;  2BWS A;  2NQ7 A;  3PKC A;  2GG5 A;  1WL6 A;  4FLL A;  4U6C A;  4JUQ A;  3MR1 A;  5E5B A;  1C21 A;  1Y1N A;  2EA4 A;  4U73 A;  2BHA A;  5CDV A;  2OAZ A;  2BWY A;  2OKN A;  5CDL A;  1WKM A;  3PKE A;  2GU6 A;  2Q8K A;  4RZY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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